F186136

General Info

Members Datasets Scaffolds Average Seq Length
142 91 142 507

Family's Representative Sequence

Representative Sequence 3300028800|Ga0265338_10000575|Ga0265338_1000057538
Length 531
Sequence MPARPGLALLIPAPLHIATSNPMEQFSHFKRQIKYILFLLLGIESLILLAGWWLGSQIFHLGILALAFYLIVLGLSAAVGLAILSVSYIVEPVRFIWQAVMHVSPAGNNITAPAPEQLNLGRELITTLCTQVYQLSSLAKQPAAPTASDQLATAIVKSLPSPLFAMNKNRQILFTNDAAGKYLGITPSDILHKDMYSLLDLSFSTIDTFDTWLTTVRNNSVTASKNWERVRLKLPDHKTSLQFDMAAHYNRAEQDQIETIVALFDRNDSYQQDDDSLSFMALTVHELRTPLTLVRGYIESLQDELGPELTGEKADILHKLEASASQLSAFVNNILNVARVDANQLILQLDEGNWSDIVKTVVADLGLRAQTHQITIECQLAPDLPAVAADRTSIYEVLANLLDNAIKYSPEGQKVIVKTSLNQNGLIETSVQDFGPGIPLGVIPHLFEKFYRNHQTKGQVSGTGLGLYLCKAIMTAHGGNIWVRSKEGQGTIIGFTLLPYSQLAEERKNNDNKGITRVANGWIKNHSLYRQ

Samples

Sample ID Description Type Environment
1 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
2 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
3 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
4 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
5 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
6 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
9 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
12 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
13 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
23 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
24 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
25 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
26 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
27 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
28 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
29 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
30 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
31 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
32 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
33 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
34 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
35 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
36 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
37 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
38 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
39 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
40 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
41 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
42 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
43 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
44 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
45 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
61 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
62 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
63 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
64 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
65 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
66 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
67 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
68 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
69 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
70 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
71 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
72 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
73 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
74 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
75 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
76 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
77 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
78 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
79 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
80 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
81 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
82 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
83 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
84 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
85 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
86 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
87 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
88 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
89 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
90 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
91 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 16.9
Nodule 0
Rhizoplane 0
Rhizosphere 80.99
Stem 0
Stem Tuber 0
Unclassified 2.11

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24741J21665_1001732 3300001915 Bacteria 6011
2 JGI24737J22298_10000007 3300001990 Bacteria 62489
3 JGI24735J21928_10000071 3300002067 Bacteria 42215
4 rootH2_10000244 3300003320 Bacteria 697651
5 rootL2_10323420 3300003322 Bacteria 2730
6 Ga0065704_10089747 3300005289 Bacteria 2835
7 Ga0070658_10000036 3300005327 Bacteria 143743
8 Ga0070658_10000071 3300005327 Bacteria 98592
9 Ga0070658_10007642 3300005327 Bacteria 8715
10 Ga0070658_10026268 3300005327 Unclassified 4670
11 Ga0070676_10018006 3300005328 Unclassified 3912
12 Ga0070683_100018540 3300005329 Bacteria 6167
13 Ga0070683_100097883 3300005329 Unclassified 2760
14 Ga0070680_100003328 3300005336 Bacteria 11998
15 Ga0070680_100009527 3300005336 Bacteria 7460
16 Ga0070682_100003293 3300005337 Bacteria 8955
17 Ga0070660_100000035 3300005339 Bacteria 77932
18 Ga0070660_100001783 3300005339 Bacteria 14785
19 Ga0070660_100019459 3300005339 Unclassified 4976
20 Ga0070674_100008288 3300005356 Bacteria 6182
21 Ga0070673_100000436 3300005364 Bacteria 22037
22 Ga0070678_100000800 3300005456 Bacteria 15838
23 Ga0070681_10029828 3300005458 Bacteria 5475
24 Ga0070681_10140274 3300005458 Bacteria 2347
25 Ga0070685_10002425 3300005466 Bacteria 9594
26 Ga0070685_10036951 3300005466 Unclassified 2763
27 Ga0070679_100014361 3300005530 Bacteria 7607
28 Ga0070679_100022916 3300005530 Bacteria 6107
29 Ga0070679_100030949 3300005530 Bacteria 5286
30 Ga0070684_100005047 3300005535 Bacteria 10081
31 Ga0068853_100000995 3300005539 Bacteria 19948
32 Ga0070665_100145795 3300005548 Bacteria 2370
33 Ga0068855_100000003 3300005563 Bacteria 589862
34 Ga0068855_100053940 3300005563 Bacteria 4729
35 Ga0068856_100000001 3300005614 Bacteria 565602
36 Ga0068856_100021680 3300005614 Bacteria 6242
37 Ga0081455_10000003 3300005937 Bacteria 367763
38 Ga0075365_10007571 3300006038 Bacteria 6098
39 Ga0075368_10018519 3300006042 Bacteria 2617
40 Ga0075364_10000048 3300006051 Bacteria 43021
41 Ga0075364_10003802 3300006051 Bacteria 8637
42 Ga0075367_10006538 3300006178 Bacteria 5898
43 Ga0075366_10000113 3300006195 Bacteria 33132
44 Ga0075366_10000120 3300006195 Bacteria 32483
45 Ga0075366_10000890 3300006195 Bacteria 14434
46 Ga0075366_10002601 3300006195 Bacteria 9279
47 Ga0097621_100000002 3300006237 Bacteria 172240
48 Ga0068871_100000101 3300006358 Bacteria 51177
49 Ga0105240_10031687 3300009093 Bacteria 6851
50 Ga0105245_10000001 3300009098 Bacteria 939270
51 Ga0105245_10000002 3300009098 Bacteria 634374
52 Ga0105245_10016729 3300009098 Bacteria 6404
53 Ga0105245_10145352 3300009098 Bacteria 2237
54 Ga0105241_10000007 3300009174 Bacteria 343524
55 Ga0105242_10022268 3300009176 Bacteria 4982
56 Ga0105238_10059491 3300009551 Unclassified 3827
57 Ga0105249_10000281 3300009553 Bacteria 53346
58 Ga0105246_10170501 3300011119 Bacteria 1666
59 Ga0157373_10008045 3300013100 Bacteria 7836
60 Ga0157371_10000702 3300013102 Bacteria 39329
61 Ga0157369_10000643 3300013105 Bacteria 45102
62 Ga0157369_10135614 3300013105 Unclassified 2606
63 Ga0157374_10000018 3300013296 Bacteria 286683
64 Ga0157374_10002607 3300013296 Bacteria 15206
65 Ga0157374_10008767 3300013296 Bacteria 8653
66 Ga0157374_10042131 3300013296 Unclassified 4211
67 Ga0157374_10068739 3300013296 Unclassified 3333
68 Ga0157372_10000843 3300013307 Bacteria 33262
69 Ga0163163_10020204 3300014325 Bacteria 6268
70 Ga0163163_10039418 3300014325 Bacteria 4610
71 Ga0207705_10000011 3300025909 Bacteria 517768
72 Ga0207705_10000065 3300025909 Bacteria 137123
73 Ga0207705_10010705 3300025909 Bacteria 6658
74 Ga0207654_10000002 3300025911 Bacteria 1460142
75 Ga0207695_10030692 3300025913 Bacteria 5913
76 Ga0207660_10005680 3300025917 Bacteria 8095
77 Ga0207657_10003070 3300025919 Bacteria 17871
78 Ga0207657_10013675 3300025919 Bacteria 7950
79 Ga0207657_10043448 3300025919 Bacteria 3958
80 Ga0207652_10006367 3300025921 Bacteria 9533
81 Ga0207652_10011509 3300025921 Bacteria 7132
82 Ga0207687_10000001 3300025927 Bacteria 1130810
83 Ga0207687_10000004 3300025927 Bacteria 841177
84 Ga0207669_10024421 3300025937 Unclassified 3248
85 Ga0207661_10016369 3300025944 Bacteria 5469
86 Ga0207667_10000008 3300025949 Bacteria 625138
87 Ga0207651_10000247 3300025960 Bacteria 23298
88 Ga0207712_10000971 3300025961 Bacteria 20645
89 Ga0207702_10000166 3300026078 Bacteria 78767
90 Ga0207683_10002557 3300026121 Bacteria 15878
91 Ga0268266_10051049 3300028379 Unclassified 3549
92 Ga0265338_10000381 3300028800 Bacteria 79305
93 Ga0265338_10000575 3300028800 Bacteria 64813
94 Ga0265338_10090343 3300028800 Bacteria 2535
95 Ga0265327_10000017 3300031251 Bacteria 445264
96 Ga0265327_10001670 3300031251 Bacteria 26672
97 Ga0395899_0004473 3300037312 Bacteria 10900
98 Ga0395900_0000781 3300037418 Bacteria 42249
99 Ga0395900_0019144 3300037418 Bacteria 6981
100 Ga0395898_0067163 3300037466 Bacteria 3472
101 Ga0395905_0002200 3300037471 Bacteria 22030
102 Ga0395905_0042897 3300037471 Unclassified 4244
103 Ga0395905_0076146 3300037471 Bacteria 3145
104 Ga0395901_0001569 3300038443 Bacteria 23673
105 Ga0395901_0004325 3300038443 Bacteria 14338
106 Ga0395901_0148909 3300038443 Bacteria 2460
107 Ga0495649_0000076 3300046694 Bacteria 84939
108 Ga0496126_0028515 3300048929 Bacteria 5318
109 Ga0501031_0004226 3300049568 Bacteria 9281
110 Ga0501032_0005151 3300049569 Bacteria 9747
111 Ga0501034_0005820 3300049571 Bacteria 13410
112 Ga0501034_0020395 3300049571 Bacteria 6766
113 Ga0501036_0006140 3300049572 Bacteria 9748
114 Ga0501036_0029142 3300049572 Bacteria 4666
115 Ga0501037_0000038 3300049573 Bacteria 121931
116 Ga0501038_0002551 3300049574 Bacteria 16981
117 Ga0501043_0001767 3300049579 Bacteria 18591
118 Ga0501046_0000065 3300049580 Bacteria 116095
119 Ga0501047_0000144 3300049581 Bacteria 86866
120 Ga0501047_0000227 3300049581 Bacteria 66683
121 Ga0501048_0000119 3300049582 Bacteria 45205
122 Ga0501070_0222037 3300049586 Bacteria 1549
123 Ga0501073_0026384 3300049589 Bacteria 4163
124 Ga0501080_0000103 3300049742 Bacteria 58069
125 Ga0501035_0005875 3300049822 Bacteria 11562
126 Ga0501035_0013372 3300049822 Bacteria 7577
127 nmdc:mga00v17_166_c1 3300050491 Bacteria 38448
128 nmdc:mga00v17_2418_c1 3300050491 Bacteria 8642
129 nmdc:mga00v17_83587_c1 3300050491 Unclassified 1997
130 nmdc:mga0yw44_27998_c1 3300050492 Unclassified 3237
131 nmdc:mga0yw44_61837_c1 3300050492 Unclassified 2298
132 nmdc:mga0yw44_67856_c1 3300050492 Bacteria 2205
133 nmdc:mga0k408_28956_c1 3300050493 Bacteria 3151
134 nmdc:mga0k408_5498_c1 3300050493 Bacteria 6747
135 nmdc:mga0k408_60_c1 3300050493 Bacteria 54928
136 nmdc:mga0k408_86_c3 3300050493 Bacteria 30584
137 nmdc:mga06z11_578_c2 3300050494 Bacteria 8849
138 nmdc:mga04h51_4005_c2 3300050495 Bacteria 2637
139 Ga0500556_0000218 3300053104 Bacteria 46755
140 Ga0500562_000002 3300053108 Bacteria 977234
141 Ga0500561_0000001 3300053137 Bacteria 957685
142 Ga0501082_0120207 3300060353 Unclassified 2277

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300011119 Ga0105246_10170501 Ga0105246_101705012 452
2 3300014325 Ga0163163_10020204 Ga0163163_100202042 478
3 3300006051 Ga0075364_10003802 Ga0075364_100038025 479
4 3300006178 Ga0075367_10006538 Ga0075367_100065385 479
5 3300006195 Ga0075366_10000113 Ga0075366_1000011314 479
6 3300006237 Ga0097621_100000002 Ga0097621_10000000292 481
7 3300006358 Ga0068871_100000101 Ga0068871_10000010123 481
8 3300009098 Ga0105245_10000002 Ga0105245_10000002536 481
9 3300013296 Ga0157374_10000018 Ga0157374_10000018131 481
10 3300025927 Ga0207687_10000001 Ga0207687_10000001674 481
11 3300005563 Ga0068855_100000003 Ga0068855_100000003511 487
12 3300013105 Ga0157369_10000643 Ga0157369_1000064316 487
13 3300025949 Ga0207667_10000008 Ga0207667_10000008502 487
14 3300009174 Ga0105241_10000007 Ga0105241_10000007154 489
15 3300025911 Ga0207654_10000002 Ga0207654_100000021392 489
16 3300049586 Ga0501070_0222037 Ga0501070_0222037_24_1502 491
17 3300009098 Ga0105245_10145352 Ga0105245_101453522 494
18 3300049742 Ga0501080_0000103 Ga0501080_0000103_11871_13406 495
19 3300005539 Ga0068853_100000995 Ga0068853_10000099518 496
20 3300006042 Ga0075368_10018519 Ga0075368_100185192 497
21 3300037466 Ga0395898_0067163 Ga0395898_0067163_938_2434 497
22 3300038443 Ga0395901_0004325 Ga0395901_0004325_2538_4034 497
23 3300050491 nmdc:mga00v17_2418_c1 nmdc:mga00v17_2418_c1_2399_3940 497
24 3300050493 nmdc:mga0k408_5498_c1 nmdc:mga0k408_5498_c1_1084_2625 497
25 3300050494 nmdc:mga06z11_578_c2 nmdc:mga06z11_578_c2_1592_3133 497
26 3300050495 nmdc:mga04h51_4005_c2 nmdc:mga04h51_4005_c2_732_2273 497
27 3300005327 Ga0070658_10000071 Ga0070658_1000007110 498
28 3300005328 Ga0070676_10018006 Ga0070676_100180062 498
29 3300005339 Ga0070660_100019459 Ga0070660_1000194593 498
30 3300005364 Ga0070673_100000436 Ga0070673_10000043622 498
31 3300005456 Ga0070678_100000800 Ga0070678_10000080011 498
32 3300005466 Ga0070685_10002425 Ga0070685_100024253 498
33 3300009176 Ga0105242_10022268 Ga0105242_100222682 498
34 3300013296 Ga0157374_10042131 Ga0157374_100421313 498
35 3300025909 Ga0207705_10000065 Ga0207705_1000006535 498
36 3300025919 Ga0207657_10043448 Ga0207657_100434483 498
37 3300025960 Ga0207651_10000247 Ga0207651_100002479 498
38 3300026121 Ga0207683_10002557 Ga0207683_100025573 498
39 3300014325 Ga0163163_10039418 Ga0163163_100394183 500
40 3300009553 Ga0105249_10000281 Ga0105249_100002816 501
41 3300025961 Ga0207712_10000971 Ga0207712_100009714 501
42 3300005337 Ga0070682_100003293 Ga0070682_1000032936 502
43 3300046694 Ga0495649_0000076 Ga0495649_0000076_79873_81411 503
44 3300028800 Ga0265338_10090343 Ga0265338_100903432 504
45 3300013307 Ga0157372_10000843 Ga0157372_100008437 505
46 3300031251 Ga0265327_10000017 Ga0265327_10000017396 505
47 3300031251 Ga0265327_10001670 Ga0265327_100016706 506
48 3300009098 Ga0105245_10016729 Ga0105245_100167297 507
49 3300005614 Ga0068856_100000001 Ga0068856_100000001511 508
50 3300026078 Ga0207702_10000166 Ga0207702_1000016622 508
51 3300028800 Ga0265338_10000575 Ga0265338_1000057538 508
52 3300005530 Ga0070679_100014361 Ga0070679_1000143612 510
53 3300005563 Ga0068855_100053940 Ga0068855_1000539404 510
54 3300005614 Ga0068856_100021680 Ga0068856_1000216804 510
55 3300013102 Ga0157371_10000702 Ga0157371_1000070225 510
56 3300013105 Ga0157369_10135614 Ga0157369_101356142 510
57 3300013296 Ga0157374_10068739 Ga0157374_100687392 510
58 3300038443 Ga0395901_0148909 Ga0395901_0148909_88_1623 510
59 3300001915 JGI24741J21665_1001732 JGI24741J21665_10017324 511
60 3300001990 JGI24737J22298_10000007 JGI24737J22298_1000000751 511
61 3300002067 JGI24735J21928_10000071 JGI24735J21928_100000716 511
62 3300003320 rootH2_10000244 rootH2_10000244129 511
63 3300003322 rootL2_10323420 rootL2_103234201 511
64 3300005289 Ga0065704_10089747 Ga0065704_100897472 511
65 3300005327 Ga0070658_10000036 Ga0070658_10000036123 511
66 3300005327 Ga0070658_10007642 Ga0070658_1000764210 511
67 3300005327 Ga0070658_10026268 Ga0070658_100262683 511
68 3300005329 Ga0070683_100018540 Ga0070683_1000185407 511
69 3300005329 Ga0070683_100097883 Ga0070683_1000978833 511
70 3300005336 Ga0070680_100003328 Ga0070680_10000332812 511
71 3300005336 Ga0070680_100009527 Ga0070680_1000095274 511
72 3300005339 Ga0070660_100000035 Ga0070660_1000000355 511
73 3300005339 Ga0070660_100001783 Ga0070660_1000017839 511
74 3300005356 Ga0070674_100008288 Ga0070674_1000082885 511
75 3300005458 Ga0070681_10029828 Ga0070681_100298285 511
76 3300005458 Ga0070681_10140274 Ga0070681_101402742 511
77 3300005466 Ga0070685_10036951 Ga0070685_100369512 511
78 3300005530 Ga0070679_100022916 Ga0070679_1000229162 511
79 3300005530 Ga0070679_100030949 Ga0070679_1000309496 511
80 3300005535 Ga0070684_100005047 Ga0070684_1000050473 511
81 3300005548 Ga0070665_100145795 Ga0070665_1001457952 511
82 3300005937 Ga0081455_10000003 Ga0081455_10000003101 511
83 3300006038 Ga0075365_10007571 Ga0075365_100075713 511
84 3300006051 Ga0075364_10000048 Ga0075364_100000485 511
85 3300006195 Ga0075366_10000120 Ga0075366_100001205 511
86 3300006195 Ga0075366_10000890 Ga0075366_1000089016 511
87 3300006195 Ga0075366_10002601 Ga0075366_100026014 511
88 3300009093 Ga0105240_10031687 Ga0105240_100316873 511
89 3300009098 Ga0105245_10000001 Ga0105245_10000001142 511
90 3300009551 Ga0105238_10059491 Ga0105238_100594912 511
91 3300013100 Ga0157373_10008045 Ga0157373_100080454 511
92 3300013296 Ga0157374_10002607 Ga0157374_100026072 511
93 3300013296 Ga0157374_10008767 Ga0157374_100087676 511
94 3300025909 Ga0207705_10000011 Ga0207705_10000011472 511
95 3300025909 Ga0207705_10010705 Ga0207705_100107056 511
96 3300025913 Ga0207695_10030692 Ga0207695_100306926 511
97 3300025917 Ga0207660_10005680 Ga0207660_1000568011 511
98 3300025919 Ga0207657_10003070 Ga0207657_100030705 511
99 3300025919 Ga0207657_10013675 Ga0207657_1001367510 511
100 3300025921 Ga0207652_10006367 Ga0207652_1000636713 511
101 3300025921 Ga0207652_10011509 Ga0207652_100115092 511
102 3300025927 Ga0207687_10000004 Ga0207687_10000004125 511
103 3300025937 Ga0207669_10024421 Ga0207669_100244212 511
104 3300025944 Ga0207661_10016369 Ga0207661_100163696 511
105 3300028379 Ga0268266_10051049 Ga0268266_100510492 511
106 3300028800 Ga0265338_10000381 Ga0265338_1000038141 511
107 3300037312 Ga0395899_0004473 Ga0395899_0004473_6658_8196 511
108 3300037418 Ga0395900_0000781 Ga0395900_0000781_40629_42167 511
109 3300037418 Ga0395900_0019144 Ga0395900_0019144_90_1628 511
110 3300037471 Ga0395905_0002200 Ga0395905_0002200_13479_15020 511
111 3300037471 Ga0395905_0042897 Ga0395905_0042897_2689_4227 511
112 3300037471 Ga0395905_0076146 Ga0395905_0076146_1576_3114 511
113 3300038443 Ga0395901_0001569 Ga0395901_0001569_2726_4264 511
114 3300048929 Ga0496126_0028515 Ga0496126_0028515_2062_3600 511
115 3300049568 Ga0501031_0004226 Ga0501031_0004226_1562_3100 511
116 3300049569 Ga0501032_0005151 Ga0501032_0005151_2213_3751 511
117 3300049571 Ga0501034_0005820 Ga0501034_0005820_197_1735 511
118 3300049571 Ga0501034_0020395 Ga0501034_0020395_5198_6739 511
119 3300049572 Ga0501036_0006140 Ga0501036_0006140_1528_3066 511
120 3300049572 Ga0501036_0029142 Ga0501036_0029142_2763_4304 511
121 3300049573 Ga0501037_0000038 Ga0501037_0000038_88928_90466 511
122 3300049574 Ga0501038_0002551 Ga0501038_0002551_7939_9477 511
123 3300049579 Ga0501043_0001767 Ga0501043_0001767_9746_11284 511
124 3300049580 Ga0501046_0000065 Ga0501046_0000065_39475_41013 511
125 3300049581 Ga0501047_0000144 Ga0501047_0000144_12195_13736 511
126 3300049581 Ga0501047_0000227 Ga0501047_0000227_41857_43395 511
127 3300049582 Ga0501048_0000119 Ga0501048_0000119_36421_37959 511
128 3300049589 Ga0501073_0026384 Ga0501073_0026384_1903_3441 511
129 3300049822 Ga0501035_0005875 Ga0501035_0005875_9918_11459 511
130 3300049822 Ga0501035_0013372 Ga0501035_0013372_5263_6801 511
131 3300050491 nmdc:mga00v17_166_c1 nmdc:mga00v17_166_c1_36427_37965 511
132 3300050491 nmdc:mga00v17_83587_c1 nmdc:mga00v17_83587_c1_222_1784 511
133 3300050492 nmdc:mga0yw44_27998_c1 nmdc:mga0yw44_27998_c1_734_2296 511
134 3300050492 nmdc:mga0yw44_61837_c1 nmdc:mga0yw44_61837_c1_257_1807 511
135 3300050492 nmdc:mga0yw44_67856_c1 nmdc:mga0yw44_67856_c1_462_2018 511
136 3300050493 nmdc:mga0k408_28956_c1 nmdc:mga0k408_28956_c1_1554_3110 511
137 3300050493 nmdc:mga0k408_60_c1 nmdc:mga0k408_60_c1_4409_5959 511
138 3300050493 nmdc:mga0k408_86_c3 nmdc:mga0k408_86_c3_26689_28251 511
139 3300053104 Ga0500556_0000218 Ga0500556_0000218_3412_4950 511
140 3300053108 Ga0500562_000002 Ga0500562_000002_62998_64560 511
141 3300053137 Ga0500561_0000001 Ga0500561_0000001_184897_186435 511
142 3300060353 Ga0501082_0120207 Ga0501082_0120207_543_2081 511

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00512

HisKA

His Kinase A (phospho-acceptor) domain

276

343

0.96

PF02518

HATPase_c

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase

389

501

0.9

PF00989

PAS

PAS fold

151

266

0.66

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pLDDT pTM Quality
75.53 0.48 Low
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Predicted Structure (AlphaFold2)

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