F185872

General Info

Members Datasets Scaffolds Average Seq Length
142 106 284 720

Family's Representative Sequence

Representative Sequence 3300025906|Ga0207699_10004631|Ga0207699_100046312
Length 819
Sequence MTNDECPKTNQRQMTKRRDSLDRYTVRSDLRCKRSTISRWRSMITRFRFGILALVWLVTANHNDAGPTPVDARPAESAATKMSEHTNRLAHEKSPYLLQHAHNPVDWYPWGEDAFAKARRENKPIFLSVGYSTCHWCHVMAHESFENEEVAAIMNREFVNIKVDREERPDVDRVYMTFVQATTGSGGWPMSVWLTPDLEPFVGGTYFPPEERYGQPAFKKVLERIATAWKEDHDKIVEQGSKIVEALRESQSTARGEGKIDGSVADAAYRQIDRSYDPKEGGFGNAPKFPRPVTLNFLTRFYARDPKSESGKHALDMALFTLGKMAAGGMHDHIGGGFHRYSVDRYWHVPHFEKMLYDQAQLAIAYLDAYQILVDPRLNPQVGIATGEERREADAKAPVRVEFEAVARDILDYVARDMTSKEGGFFSAEDADSPVVGIDDPGHKKTAEGAFYVWTKTEIDDALGDSAEIFDFHYGVQAHGNAPEGSDPHDEFRGKNILIERHTIAETAQHFKKSEGEIANVLTQSREKLFGIRLLRPRPHRDDKIISAWNGLMISAYARAAQVIDEPRYLEIATRSANFVRTKLYDPSRKILYRSYREGRSNVEGFADDYAMVIQGLLDLYEASFDVEWLKFAIQLQEIQDRLFFDEKNGGYFSSSGRDKSVFVRIKDDNDGAEPAASSIAALNLLRLSQIYDDPKLAERAKKTIDSFATVLLQFPSGMPQMLVAVENSLGKPRQIVIAGKKDSSETKALLKEVHRHFLPNTVVILADANEGQKYLGERNEALRAMSLVEGKPAAYVCENFTCKAPVTDAKRLSDLLKL

Samples

Sample ID Description Type Environment
1 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
15 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
16 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
17 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
20 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
21 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
22 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
23 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
24 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
25 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
26 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
31 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
32 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
33 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
34 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
35 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
36 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
37 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
38 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
39 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
40 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
41 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
42 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
44 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
46 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
48 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
49 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
50 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
51 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
52 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
53 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
54 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
55 3300025290 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (version 2) Metagenome Rhizosphere
56 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
79 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
82 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
83 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
84 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
85 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
86 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
87 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
88 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
89 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
90 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
91 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
92 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
93 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
94 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
95 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
96 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
97 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
98 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
99 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
100 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
101 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
102 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
103 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
104 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
105 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
106 2786546517 Verrucomicrobia bacterium LW23 Isolate Rhizoplane

Type Distribution

Type Percentage (%)
Metagenomes 99.3
Metatranscriptomes 0
Isolates 0.7

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.11
Nodule 0
Rhizoplane 8.45
Rhizosphere 87.32
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207699_10004631 3300025906 Bacteria 6578
2 JGI25406J46586_10000964 3300003203 Bacteria 13517
3 Ga0065712_10001742 3300005290 Bacteria 6045
4 Ga0065712_10075694 3300005290 Bacteria 3806
5 Ga0065715_10000421 3300005293 Bacteria 13595
6 Ga0065707_10001845 3300005295 Bacteria 7161
7 Ga0070676_10003783 3300005328 Bacteria 7939
8 Ga0070683_100076032 3300005329 Bacteria 3138
9 Ga0070689_100002597 3300005340 Bacteria 11836
10 Ga0070689_100029555 3300005340 Bacteria 4150
11 Ga0070689_100063417 3300005340 Bacteria 2876
12 Ga0070687_100012995 3300005343 Bacteria 3696
13 Ga0070675_100000314 3300005354 Bacteria 32586
14 Ga0070675_100021962 3300005354 Bacteria 5098
15 Ga0070675_100022070 3300005354 Bacteria 5086
16 Ga0070675_100022868 3300005354 Bacteria 4995
17 Ga0070675_100058027 3300005354 Bacteria 3192
18 Ga0070671_100086215 3300005355 Bacteria 2627
19 Ga0070688_100012481 3300005365 Bacteria 4762
20 Ga0070659_100005730 3300005366 Bacteria 8945
21 Ga0070714_100012614 3300005435 Bacteria 6749
22 Ga0070713_100003104 3300005436 Bacteria 10924
23 Ga0070700_100005325 3300005441 Bacteria 6802
24 Ga0070694_100052035 3300005444 Bacteria 2767
25 Ga0070708_100016976 3300005445 Bacteria 6057
26 Ga0070708_100024411 3300005445 Bacteria 5158
27 Ga0070685_10009773 3300005466 Bacteria 4973
28 Ga0070706_100000012 3300005467 Bacteria 195040
29 Ga0070707_100030523 3300005468 Bacteria 5132
30 Ga0070698_100006835 3300005471 Bacteria 12359
31 Ga0070698_100007523 3300005471 Bacteria 11783
32 Ga0070698_100021181 3300005471 Bacteria 6811
33 Ga0070698_100037119 3300005471 Bacteria 5025
34 Ga0070699_100076744 3300005518 Bacteria 2909
35 Ga0070684_100008408 3300005535 Bacteria 8065
36 Ga0070697_100011909 3300005536 Bacteria 6808
37 Ga0070697_100029994 3300005536 Bacteria 4367
38 Ga0070697_100059986 3300005536 Bacteria 3100
39 Ga0070697_100094649 3300005536 Bacteria 2475
40 Ga0068853_100099660 3300005539 Bacteria 2567
41 Ga0070665_100039997 3300005548 Bacteria 4714
42 Ga0070704_100014408 3300005549 Bacteria 4938
43 Ga0068855_100003416 3300005563 Bacteria 19434
44 Ga0068856_100006642 3300005614 Bacteria 11333
45 Ga0068856_100018993 3300005614 Bacteria 6670
46 Ga0068859_100004161 3300005617 Bacteria 14780
47 Ga0068858_100009600 3300005842 Bacteria 9228
48 Ga0068858_100015803 3300005842 Bacteria 7099
49 Ga0068860_100008587 3300005843 Bacteria 10184
50 Ga0068862_100036037 3300005844 Bacteria 4191
51 Ga0081455_10000770 3300005937 Bacteria 41373
52 Ga0081455_10001011 3300005937 Bacteria 35586
53 Ga0081455_10004040 3300005937 Bacteria 16628
54 Ga0081540_1000018 3300005983 Bacteria 164931
55 Ga0081539_10001276 3300005985 Bacteria 44329
56 Ga0070717_10001534 3300006028 Bacteria 16020
57 Ga0070717_10002191 3300006028 Bacteria 13718
58 Ga0075367_10003142 3300006178 Bacteria 7776
59 Ga0075366_10001937 3300006195 Bacteria 10465
60 Ga0075436_100018537 3300006914 Bacteria 4764
61 Ga0097620_100004161 3300006931 Bacteria 14780
62 Ga0105240_10013345 3300009093 Bacteria 11291
63 Ga0111539_10052446 3300009094 Bacteria 4855
64 Ga0105245_10084306 3300009098 Bacteria 2911
65 Ga0114129_10097634 3300009147 Bacteria 4067
66 Ga0105249_10006704 3300009553 Bacteria 10032
67 Ga0105249_10098747 3300009553 Bacteria 2743
68 Ga0105239_10141784 3300010375 Bacteria 2678
69 Ga0157370_10012054 3300013104 Bacteria 8999
70 Ga0157369_10006871 3300013105 Bacteria 13128
71 Ga0157378_10023126 3300013297 Bacteria 5469
72 Ga0157378_10088753 3300013297 Bacteria 2806
73 Ga0163162_10086799 3300013306 Bacteria 3207
74 Ga0157379_10027083 3300014968 Bacteria 5102
75 Ga0213876_10039279 3300021384 Bacteria 2500
76 Ga0207673_1000579 3300025290 Bacteria 3891
77 Ga0207697_10001697 3300025315 Bacteria 11851
78 Ga0207645_10005582 3300025907 Bacteria 9099
79 Ga0207684_10000028 3300025910 Bacteria 306450
80 Ga0207684_10018448 3300025910 Bacteria 5974
81 Ga0207695_10014249 3300025913 Bacteria 9430
82 Ga0207662_10010205 3300025918 Bacteria 5180
83 Ga0207646_10000794 3300025922 Bacteria 41086
84 Ga0207646_10004400 3300025922 Bacteria 15319
85 Ga0207646_10013165 3300025922 Bacteria 7917
86 Ga0207659_10000402 3300025926 Bacteria 26071
87 Ga0207659_10003989 3300025926 Bacteria 8906
88 Ga0207687_10014434 3300025927 Bacteria 5169
89 Ga0207700_10037259 3300025928 Bacteria 3520
90 Ga0207644_10034013 3300025931 Bacteria 3566
91 Ga0207690_10017493 3300025932 Bacteria 4378
92 Ga0207706_10002753 3300025933 Bacteria 17100
93 Ga0207706_10017708 3300025933 Bacteria 6418
94 Ga0207670_10046907 3300025936 Bacteria 2873
95 Ga0207689_10082153 3300025942 Bacteria 2649
96 Ga0207661_10028287 3300025944 Bacteria 4291
97 Ga0207661_10087974 3300025944 Bacteria 2581
98 Ga0207677_10003113 3300026023 Bacteria 8758
99 Ga0207703_10005688 3300026035 Bacteria 10003
100 Ga0207703_10017261 3300026035 Bacteria 5632
101 Ga0207708_10002220 3300026075 Bacteria 14360
102 Ga0207708_10003998 3300026075 Bacteria 10849
103 Ga0207702_10005639 3300026078 Bacteria 10915
104 Ga0207702_10043619 3300026078 Bacteria 3767
105 Ga0207641_10045429 3300026088 Bacteria 3698
106 Ga0207675_100122797 3300026118 Bacteria 2458
107 Ga0207683_10059919 3300026121 Bacteria 3345
108 Ga0207428_10012823 3300027907 Bacteria 7349
109 Ga0268266_10004219 3300028379 Bacteria 13839
110 Ga0268264_10042471 3300028381 Bacteria 3764
111 Ga0268264_10045767 3300028381 Bacteria 3634
112 Ga0265338_10015186 3300028800 Bacteria 8489
113 Ga0265316_10016399 3300031344 Bacteria 6427
114 Ga0265316_10022184 3300031344 Bacteria 5361
115 Ga0373925_0013166 3300037068 Bacteria 5987
116 Ga0395898_0007263 3300037466 Bacteria 11759
117 Ga0395905_0009725 3300037471 Bacteria 9383
118 Ga0395905_0026448 3300037471 Bacteria 5470
119 Ga0436364_0338319 3300037853 Bacteria 2404
120 Ga0436365_0533541 3300039437 Bacteria 11203
121 Ga0451577_0000826 3300042876 Bacteria 46319
122 Ga0451577_0073724 3300042876 Bacteria 3045
123 Ga0495628_0042966 3300046516 Bacteria 3602
124 Ga0495665_0025002 3300046531 Bacteria 3209
125 Ga0495587_0011596 3300046536 Bacteria 5581
126 Ga0495645_0094457 3300046543 Bacteria 2133
127 Ga0495599_0005133 3300046678 Bacteria 7801
128 Ga0495658_0034004 3300046683 Bacteria 2795
129 Ga0496101_0059272 3300048904 Bacteria 2774
130 Ga0496102_0105179 3300048905 Bacteria 2626
131 Ga0496102_0109697 3300048905 Bacteria 2572
132 Ga0496104_0002121 3300048907 Bacteria 17222
133 Ga0496105_0001399 3300048908 Bacteria 16950
134 Ga0496107_0059891 3300048910 Bacteria 2756
135 Ga0496108_0012549 3300048911 Bacteria 6901
136 Ga0496108_0050271 3300048911 Bacteria 3489
137 Ga0496109_0004377 3300048912 Bacteria 11799
138 Ga0496112_0013240 3300048915 Bacteria 7612
139 Ga0496114_0032097 3300048917 Bacteria 4321
140 nmdc:mga08y16_15003_c1 3300050511 Bacteria 8150
141 Ga0500555_000024 3300053103 Bacteria 134279
142 2787438710 2786546517 Bacteria 6614109
143 Ga0207699_10004631
144 JGI25406J46586_10000964
145 Ga0065712_10001742
146 Ga0065712_10075694
147 Ga0065715_10000421
148 Ga0065707_10001845
149 Ga0070676_10003783
150 Ga0070683_100076032
151 Ga0070689_100002597
152 Ga0070689_100029555
153 Ga0070689_100063417
154 Ga0070687_100012995
155 Ga0070675_100000314
156 Ga0070675_100021962
157 Ga0070675_100022070
158 Ga0070675_100022868
159 Ga0070675_100058027
160 Ga0070671_100086215
161 Ga0070688_100012481
162 Ga0070659_100005730
163 Ga0070714_100012614
164 Ga0070713_100003104
165 Ga0070700_100005325
166 Ga0070694_100052035
167 Ga0070708_100016976
168 Ga0070708_100024411
169 Ga0070685_10009773
170 Ga0070706_100000012
171 Ga0070707_100030523
172 Ga0070698_100006835
173 Ga0070698_100007523
174 Ga0070698_100021181
175 Ga0070698_100037119
176 Ga0070699_100076744
177 Ga0070684_100008408
178 Ga0070697_100011909
179 Ga0070697_100029994
180 Ga0070697_100059986
181 Ga0070697_100094649
182 Ga0068853_100099660
183 Ga0070665_100039997
184 Ga0070704_100014408
185 Ga0068855_100003416
186 Ga0068856_100006642
187 Ga0068856_100018993
188 Ga0068859_100004161
189 Ga0068858_100009600
190 Ga0068858_100015803
191 Ga0068860_100008587
192 Ga0068862_100036037
193 Ga0081455_10000770
194 Ga0081455_10001011
195 Ga0081455_10004040
196 Ga0081540_1000018
197 Ga0081539_10001276
198 Ga0070717_10001534
199 Ga0070717_10002191
200 Ga0075367_10003142
201 Ga0075366_10001937
202 Ga0075436_100018537
203 Ga0097620_100004161
204 Ga0105240_10013345
205 Ga0111539_10052446
206 Ga0105245_10084306
207 Ga0114129_10097634
208 Ga0105249_10006704
209 Ga0105249_10098747
210 Ga0105239_10141784
211 Ga0157370_10012054
212 Ga0157369_10006871
213 Ga0157378_10023126
214 Ga0157378_10088753
215 Ga0163162_10086799
216 Ga0157379_10027083
217 Ga0213876_10039279
218 Ga0207673_1000579
219 Ga0207697_10001697
220 Ga0207645_10005582
221 Ga0207684_10000028
222 Ga0207684_10018448
223 Ga0207695_10014249
224 Ga0207662_10010205
225 Ga0207646_10000794
226 Ga0207646_10004400
227 Ga0207646_10013165
228 Ga0207659_10000402
229 Ga0207659_10003989
230 Ga0207687_10014434
231 Ga0207700_10037259
232 Ga0207644_10034013
233 Ga0207690_10017493
234 Ga0207706_10002753
235 Ga0207706_10017708
236 Ga0207670_10046907
237 Ga0207689_10082153
238 Ga0207661_10028287
239 Ga0207661_10087974
240 Ga0207677_10003113
241 Ga0207703_10005688
242 Ga0207703_10017261
243 Ga0207708_10002220
244 Ga0207708_10003998
245 Ga0207702_10005639
246 Ga0207702_10043619
247 Ga0207641_10045429
248 Ga0207675_100122797
249 Ga0207683_10059919
250 Ga0207428_10012823
251 Ga0268266_10004219
252 Ga0268264_10042471
253 Ga0268264_10045767
254 Ga0265338_10015186
255 Ga0265316_10016399
256 Ga0265316_10022184
257 Ga0373925_0013166
258 Ga0395898_0007263
259 Ga0395905_0009725
260 Ga0395905_0026448
261 Ga0436364_0338319
262 Ga0436365_0533541
263 Ga0451577_0000826
264 Ga0451577_0073724
265 Ga0495628_0042966
266 Ga0495665_0025002
267 Ga0495587_0011596
268 Ga0495645_0094457
269 Ga0495599_0005133
270 Ga0495658_0034004
271 Ga0496101_0059272
272 Ga0496102_0105179
273 Ga0496102_0109697
274 Ga0496104_0002121
275 Ga0496105_0001399
276 Ga0496107_0059891
277 Ga0496108_0012549
278 Ga0496108_0050271
279 Ga0496109_0004377
280 Ga0496112_0013240
281 Ga0496114_0032097
282 nmdc:mga08y16_15003_c1
283 Ga0500555_000024
284 2787438710

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03190

Thioredox_DsbH

Protein of unknown function, DUF255

86

248

0.99

PF13899

Thioredoxin_7

Thioredoxin-like

106

196

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ira-assembly1.cif.gz_A the crystal structure of one domain of the conserved protein from methanosarcina mazei go1 0.9344 12 177
7tkv-assembly1.cif.gz_B crystal structure of the thioredox_dsbh domain-containing uncharacterized protein bab1_2064 from brucella abortus 0.9333 13 694
7tkv-assembly1.cif.gz_B crystal structure of the thioredox_dsbh domain-containing uncharacterized protein bab1_2064 from brucella abortus 0.9245 13 694
7tkv-assembly1.cif.gz_A crystal structure of the thioredox_dsbh domain-containing uncharacterized protein bab1_2064 from brucella abortus 0.9204 12 744
7tkv-assembly1.cif.gz_A crystal structure of the thioredox_dsbh domain-containing uncharacterized protein bab1_2064 from brucella abortus 0.9163 12 744
ID Description Score Start End Superfamily
af_Q6T393_64_232_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.9759 13 180 3.40.30.10
af_O53432_8_170_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.9678 13 180 3.40.30.10
af_Q6T393_64_232_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.959 13 180 3.40.30.10
af_O53432_8_170_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.9564 13 180 3.40.30.10
af_Q8TB22_239_408_1.50.10.20 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.9372 199 386 1.50.10.20
ID Description Score Start End GO Terms
AF-A0A353B7L6-F1-model_v4 Thioredoxin domain-containing protein 0.9869 13 136
AF-A0A6P0M7Z6-F1-model_v4 Thioredoxin domain-containing protein 0.984 13 160
AF-A0A4Q5RAW0-F1-model_v4 Thioredoxin domain-containing protein 0.9839 12 138
AF-A0A838Q282-F1-model_v4 Thioredoxin domain-containing protein 0.9833 11 142
AF-A0A661P915-F1-model_v4 Thioredoxin domain-containing protein 0.982 14 116

Map