F183679

General Info

Members Datasets Scaffolds Average Seq Length
141 112 141 470

Family's Representative Sequence

Representative Sequence 3300046648|Ga0495611_0061131|Ga0495611_0061131_18_1502
Length 494
Sequence VQEVEVVPRSRPRLDGPALPADLARFDEVTRTVAAELRERTVWHVNSTASGGGVAELLSQLLGYLVDGGIRCRWVVIDGSPGFFRLTKRIHNRLHGSLGDAGPLDAREQSIYRRITDRELRPLLDLVAPGDVAVLHDPQTAGLVGPLRDAGLDVIWVCHVGIDEPNDLVRSAWDFLRPDVERADALVFSRRAYVWEGLAGRRVRVIPPCIDPTSAKNMPLAPPDVAAVLDETRIVASRTPPPDLRIAIDGADVEVHHEAHIVQDEPVPPDAPIVAQVSRWDRLKDHVGVLDGFAENVDLGLGAHLLLVGPAAASVADDPEGKEVFAEIVEARHRLPRAQRRRIHIVSLPVDDQTENAVVVNALQRRADVVVQKSLAEGFGLTVAEAMWKERPVVGSRVGGIQDQIRDGRSGLLVDPTDLAAFARISCRRTSSARTCGSCRTSSSIEGEVQVARVVTPVVGREPLTVVPRPGADVTITSPPIAARRSTIPCTPVP

Samples

Sample ID Description Type Environment
1 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
9 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
10 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
13 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
14 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
17 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
18 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
19 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
20 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
21 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
22 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
23 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
24 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
25 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
26 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
27 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
28 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
29 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
30 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
31 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
32 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
33 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
34 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
35 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
36 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
37 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
38 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
63 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
64 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
65 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
66 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
67 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
68 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
69 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
70 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
71 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
72 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
73 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
74 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
75 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
76 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
77 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
78 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
79 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
80 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
81 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
82 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
83 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
84 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
85 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
86 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
87 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
88 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
89 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
90 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
91 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
92 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
93 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
94 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
95 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
96 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
97 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
98 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
99 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
100 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
101 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
102 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
103 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
104 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
105 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
106 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
107 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
108 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
109 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
110 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
111 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
112 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.29
Metatranscriptomes 0.71
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 7.8
Rhizosphere 92.2
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10000314 3300001979 Bacteria 20684
2 Ga0070683_100006874 3300005329 Bacteria 9558
3 Ga0070683_100025601 3300005329 Bacteria 5301
4 Ga0070670_100061939 3300005331 Bacteria 3211
5 Ga0070682_100001413 3300005337 Bacteria 13524
6 Ga0068868_100000261 3300005338 Bacteria 35848
7 Ga0070661_100000005 3300005344 Bacteria 220455
8 Ga0070661_100097193 3300005344 Bacteria 2186
9 Ga0070668_100047393 3300005347 Bacteria 3305
10 Ga0070674_100000022 3300005356 Bacteria 85839
11 Ga0070688_100010689 3300005365 Bacteria 5070
12 Ga0070667_100001976 3300005367 Bacteria 18177
13 Ga0070714_100147961 3300005435 Bacteria 2114
14 Ga0070678_100049640 3300005456 Bacteria 3030
15 Ga0070678_100089172 3300005456 Bacteria 2360
16 Ga0070662_100000007 3300005457 Bacteria 168761
17 Ga0070684_100035284 3300005535 Bacteria 4280
18 Ga0070665_100081203 3300005548 Bacteria 3248
19 Ga0068855_100023117 3300005563 Bacteria 7449
20 Ga0068855_100024667 3300005563 Bacteria 7193
21 Ga0068854_100003685 3300005578 Bacteria 9585
22 Ga0068856_100008835 3300005614 Bacteria 9804
23 Ga0068852_100007603 3300005616 Bacteria 7924
24 Ga0068866_10000001 3300005718 Bacteria 519680
25 Ga0068851_10004572 3300005834 Bacteria 6242
26 Ga0068863_100030982 3300005841 Bacteria 5107
27 Ga0068860_100009109 3300005843 Bacteria 9878
28 Ga0068862_100004102 3300005844 Bacteria 12353
29 Ga0081455_10050060 3300005937 Bacteria 3595
30 Ga0070715_10000001 3300006163 Bacteria 693690
31 Ga0075435_100089293 3300007076 Bacteria 2541
32 Ga0105240_10001343 3300009093 Bacteria 42182
33 Ga0105240_10156837 3300009093 Bacteria 2706
34 Ga0105245_10000056 3300009098 Bacteria 124109
35 Ga0105245_10037940 3300009098 Bacteria 4284
36 Ga0105245_10041964 3300009098 Bacteria 4080
37 Ga0105238_10000023 3300009551 Bacteria 196844
38 Ga0105249_10006788 3300009553 Bacteria 9974
39 Ga0105246_10124333 3300011119 Bacteria 1917
40 Ga0157371_10001996 3300013102 Bacteria 20195
41 Ga0157370_10016801 3300013104 Bacteria 7400
42 Ga0157370_10171847 3300013104 Bacteria 2014
43 Ga0157369_10000099 3300013105 Bacteria 120032
44 Ga0157369_10006266 3300013105 Bacteria 13807
45 Ga0157379_10007663 3300014968 Bacteria 9347
46 Ga0224712_10026744 3300022467 Bacteria 2044
47 Ga0207656_10002458 3300025321 Bacteria 6250
48 Ga0207642_10000006 3300025899 Bacteria 230268
49 Ga0207642_10000007 3300025899 Bacteria 226017
50 Ga0207685_10000011 3300025905 Bacteria 213430
51 Ga0207693_10003704 3300025915 Bacteria 13030
52 Ga0207649_10000005 3300025920 Bacteria 356179
53 Ga0207694_10000004 3300025924 Bacteria 967075
54 Ga0207650_10043771 3300025925 Bacteria 3288
55 Ga0207687_10000007 3300025927 Bacteria 604185
56 Ga0207687_10000167 3300025927 Bacteria 44044
57 Ga0207687_10005903 3300025927 Bacteria 8101
58 Ga0207664_10125657 3300025929 Bacteria 2153
59 Ga0207706_10000018 3300025933 Bacteria 168729
60 Ga0207669_10000009 3300025937 Bacteria 168012
61 Ga0207661_10000164 3300025944 Bacteria 43091
62 Ga0207661_10002364 3300025944 Bacteria 12980
63 Ga0207667_10072884 3300025949 Bacteria 3569
64 Ga0207712_10003089 3300025961 Bacteria 10623
65 Ga0207640_10000152 3300025981 Bacteria 50232
66 Ga0207658_10000829 3300025986 Bacteria 25830
67 Ga0207677_10000046 3300026023 Bacteria 105382
68 Ga0207702_10001912 3300026078 Bacteria 20342
69 Ga0207702_10006593 3300026078 Bacteria 9979
70 Ga0207641_10144131 3300026088 Bacteria 2152
71 Ga0207674_10281738 3300026116 Bacteria 1610
72 Ga0207683_10087762 3300026121 Bacteria 2766
73 Ga0207698_10004599 3300026142 Bacteria 8425
74 Ga0268266_10072896 3300028379 Bacteria 2979
75 Ga0268264_10003178 3300028381 Bacteria 14229
76 Ga0268264_10115023 3300028381 Bacteria 2363
77 Ga0395898_0040776 3300037466 Bacteria 4589
78 Ga0395901_0279856 3300038443 Bacteria 1733
79 Ga0436362_0558356 3300039453 Bacteria 2004
80 Ga0495592_0000109 3300046454 Bacteria 72116
81 Ga0495582_0000023 3300046473 Bacteria 83274
82 Ga0495607_0009932 3300046501 Bacteria 6410
83 Ga0495618_0000053 3300046514 Bacteria 84115
84 Ga0495628_0000170 3300046516 Bacteria 56830
85 Ga0495628_0001375 3300046516 Bacteria 22311
86 Ga0495630_0000025 3300046517 Bacteria 152364
87 Ga0495630_0000026 3300046517 Bacteria 147084
88 Ga0495644_0000808 3300046523 Bacteria 12899
89 Ga0495644_0000995 3300046523 Bacteria 11795
90 Ga0495665_0021259 3300046531 Bacteria 3486
91 Ga0495640_0007964 3300046533 Bacteria 8333
92 Ga0495587_0034215 3300046536 Bacteria 3065
93 Ga0495609_0018881 3300046538 Bacteria 3193
94 Ga0495667_0109205 3300046559 Bacteria 1787
95 Ga0495656_0003039 3300046615 Bacteria 5641
96 Ga0495611_0061131 3300046648 Bacteria 1712
97 Ga0495635_0000042 3300046663 Bacteria 84550
98 Ga0495659_0004720 3300046664 Bacteria 4290
99 Ga0495657_0007415 3300046675 Bacteria 8475
100 Ga0495657_0041788 3300046675 Bacteria 3135
101 Ga0495599_0025395 3300046678 Bacteria 3708
102 Ga0495647_0001600 3300046681 Bacteria 6994
103 Ga0495658_0000021 3300046683 Bacteria 83269
104 Ga0495658_0008320 3300046683 Bacteria 5141
105 Ga0495613_0000042 3300046689 Bacteria 130403
106 Ga0495589_0012277 3300046794 Bacteria 4441
107 Ga0495600_0002447 3300046809 Bacteria 10649
108 Ga0495604_0000013 3300047317 Bacteria 234578
109 Ga0495604_0000038 3300047317 Bacteria 123703
110 Ga0495676_0236870 3300047321 Bacteria 1251
111 Ga0495680_0001731 3300047322 Bacteria 23178
112 Ga0495685_010163 3300047447 Bacteria 3154
113 Ga0495602_0000364 3300048088 Bacteria 42346
114 Ga0495602_0118442 3300048088 Bacteria 2136
115 Ga0496103_0132519 3300048906 Bacteria 1592
116 Ga0496108_0000001 3300048911 Bacteria 919044
117 Ga0496108_0000045 3300048911 Bacteria 137416
118 Ga0496109_0000003 3300048912 Bacteria 420862
119 Ga0496109_0000032 3300048912 Bacteria 162984
120 Ga0496109_0000252 3300048912 Bacteria 51599
121 Ga0496110_0010962 3300048913 Bacteria 7394
122 Ga0496111_0006539 3300048914 Bacteria 7580
123 Ga0496112_0000003 3300048915 Bacteria 660147
124 Ga0496112_0032193 3300048915 Bacteria 5090
125 Ga0496113_0000411 3300048916 Bacteria 20739
126 Ga0501040_0004059 3300049576 Bacteria 9517
127 Ga0501070_0005229 3300049586 Bacteria 11064
128 Ga0501073_0118316 3300049589 Bacteria 1836
129 Ga0501074_0001044 3300049590 Bacteria 18032
130 Ga0501079_0000788 3300049741 Bacteria 21617
131 Ga0501080_0015824 3300049742 Bacteria 6959
132 nmdc:mga06r32_94337_c1 3300050510 Bacteria 2928
133 nmdc:mga0rr50_78428_c1 3300050513 Bacteria 2541
134 Ga0495601_0001634 3300053077 Bacteria 12355
135 Ga0495612_0000319 3300053078 Bacteria 19457
136 Ga0495619_0000130 3300053085 Bacteria 55619
137 Ga0495619_0001462 3300053085 Bacteria 15570
138 Ga0495619_0003298 3300053085 Bacteria 10430
139 Ga0501084_0045833 3300054114 Bacteria 3660
140 Ga0501084_0131858 3300054114 Bacteria 2104
141 Ga0501082_0138749 3300060353 Bacteria 2110

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300009093 Ga0105240_10156837 Ga0105240_101568371 397
2 3300047321 Ga0495676_0236870 Ga0495676_0236870_11_1213 399
3 3300046454 Ga0495592_0000109 Ga0495592_0000109_5561_6796 410
4 3300046675 Ga0495657_0041788 Ga0495657_0041788_1814_3070 415
5 3300046531 Ga0495665_0021259 Ga0495665_0021259_1796_3202 448
6 3300060353 Ga0501082_0138749 Ga0501082_0138749_261_1631 451
7 3300009551 Ga0105238_10000023 Ga0105238_1000002365 452
8 3300050513 nmdc:mga0rr50_78428_c1 nmdc:mga0rr50_78428_c1_106_1488 459
9 3300005344 Ga0070661_100097193 Ga0070661_1000971932 463
10 3300005563 Ga0068855_100023117 Ga0068855_1000231172 463
11 3300005563 Ga0068855_100024667 Ga0068855_1000246673 463
12 3300009093 Ga0105240_10001343 Ga0105240_1000134315 463
13 3300013104 Ga0157370_10016801 Ga0157370_100168014 463
14 3300013105 Ga0157369_10006266 Ga0157369_100062662 463
15 3300022467 Ga0224712_10026744 Ga0224712_100267442 463
16 3300025949 Ga0207667_10072884 Ga0207667_100728842 463
17 3300037466 Ga0395898_0040776 Ga0395898_0040776_2843_4252 463
18 3300038443 Ga0395901_0279856 Ga0395901_0279856_126_1535 463
19 3300005616 Ga0068852_100007603 Ga0068852_1000076036 464
20 3300005937 Ga0081455_10050060 Ga0081455_100500604 464
21 3300026142 Ga0207698_10004599 Ga0207698_100045993 464
22 3300005344 Ga0070661_100000005 Ga0070661_100000005148 465
23 3300025920 Ga0207649_10000005 Ga0207649_10000005291 465
24 3300006163 Ga0070715_10000001 Ga0070715_1000000158 467
25 3300025905 Ga0207685_10000011 Ga0207685_1000001159 467
26 3300046689 Ga0495613_0000042 Ga0495613_0000042_55701_57110 468
27 3300049586 Ga0501070_0005229 Ga0501070_0005229_2001_3413 468
28 3300049590 Ga0501074_0001044 Ga0501074_0001044_1480_2892 468
29 3300049741 Ga0501079_0000788 Ga0501079_0000788_17464_18876 468
30 3300049742 Ga0501080_0015824 Ga0501080_0015824_361_1773 468
31 3300005435 Ga0070714_100147961 Ga0070714_1001479612 469
32 3300009098 Ga0105245_10000056 Ga0105245_1000005670 469
33 3300025927 Ga0207687_10000007 Ga0207687_1000000753 469
34 3300025929 Ga0207664_10125657 Ga0207664_101256572 469
35 3300005329 Ga0070683_100025601 Ga0070683_1000256013 470
36 3300005331 Ga0070670_100061939 Ga0070670_1000619392 470
37 3300005337 Ga0070682_100001413 Ga0070682_1000014136 470
38 3300005365 Ga0070688_100010689 Ga0070688_1000106893 470
39 3300005535 Ga0070684_100035284 Ga0070684_1000352843 470
40 3300005578 Ga0068854_100003685 Ga0068854_1000036853 470
41 3300005614 Ga0068856_100008835 Ga0068856_1000088353 470
42 3300005834 Ga0068851_10004572 Ga0068851_100045722 470
43 3300009098 Ga0105245_10037940 Ga0105245_100379402 470
44 3300009098 Ga0105245_10041964 Ga0105245_100419643 470
45 3300013102 Ga0157371_10001996 Ga0157371_100019964 470
46 3300013105 Ga0157369_10000099 Ga0157369_10000099101 470
47 3300025321 Ga0207656_10002458 Ga0207656_100024588 470
48 3300025915 Ga0207693_10003704 Ga0207693_100037048 470
49 3300025925 Ga0207650_10043771 Ga0207650_100437712 470
50 3300025927 Ga0207687_10000167 Ga0207687_100001674 470
51 3300025927 Ga0207687_10005903 Ga0207687_100059033 470
52 3300025944 Ga0207661_10000164 Ga0207661_1000016417 470
53 3300025944 Ga0207661_10002364 Ga0207661_100023646 470
54 3300025981 Ga0207640_10000152 Ga0207640_100001527 470
55 3300026078 Ga0207702_10001912 Ga0207702_100019127 470
56 3300026078 Ga0207702_10006593 Ga0207702_100065933 470
57 3300026116 Ga0207674_10281738 Ga0207674_102817381 470
58 3300046501 Ga0495607_0009932 Ga0495607_0009932_705_2123 470
59 3300046517 Ga0495630_0000025 Ga0495630_0000025_55583_56998 470
60 3300046523 Ga0495644_0000808 Ga0495644_0000808_10123_11541 470
61 3300046538 Ga0495609_0018881 Ga0495609_0018881_728_2146 470
62 3300046615 Ga0495656_0003039 Ga0495656_0003039_820_2238 470
63 3300046648 Ga0495611_0061131 Ga0495611_0061131_18_1502 470
64 3300046664 Ga0495659_0004720 Ga0495659_0004720_2175_3593 470
65 3300046678 Ga0495599_0025395 Ga0495599_0025395_2271_3689 470
66 3300046683 Ga0495658_0008320 Ga0495658_0008320_652_2067 470
67 3300046794 Ga0495589_0012277 Ga0495589_0012277_60_1478 470
68 3300047317 Ga0495604_0000013 Ga0495604_0000013_162061_163476 470
69 3300047447 Ga0495685_010163 Ga0495685_010163_414_1832 470
70 3300048911 Ga0496108_0000045 Ga0496108_0000045_48401_49816 470
71 3300048912 Ga0496109_0000032 Ga0496109_0000032_87610_89025 470
72 3300048912 Ga0496109_0000252 Ga0496109_0000252_48099_49514 470
73 3300048913 Ga0496110_0010962 Ga0496110_0010962_2019_3434 470
74 3300048914 Ga0496111_0006539 Ga0496111_0006539_2000_3415 470
75 3300048915 Ga0496112_0032193 Ga0496112_0032193_2599_4014 470
76 3300048916 Ga0496113_0000411 Ga0496113_0000411_2024_3439 470
77 3300049576 Ga0501040_0004059 Ga0501040_0004059_3700_5118 470
78 3300050510 nmdc:mga06r32_94337_c1 nmdc:mga06r32_94337_c1_333_1763 470
79 3300053085 Ga0495619_0000130 Ga0495619_0000130_38023_39438 470
80 3300054114 Ga0501084_0045833 Ga0501084_0045833_1367_2785 470
81 3300005841 Ga0068863_100030982 Ga0068863_1000309821 471
82 3300026088 Ga0207641_10144131 Ga0207641_101441311 471
83 3300028381 Ga0268264_10115023 Ga0268264_101150232 471
84 3300039453 Ga0436362_0558356 Ga0436362_0558356_41_1468 471
85 3300048906 Ga0496103_0132519 Ga0496103_0132519_56_1471 471
86 3300049589 Ga0501073_0118316 Ga0501073_0118316_321_1760 471
87 3300053085 Ga0495619_0001462 Ga0495619_0001462_8731_10152 471
88 3300054114 Ga0501084_0131858 Ga0501084_0131858_457_1896 471
89 3300005338 Ga0068868_100000261 Ga0068868_10000026112 472
90 3300005356 Ga0070674_100000022 Ga0070674_10000002210 472
91 3300005456 Ga0070678_100049640 Ga0070678_1000496403 472
92 3300005456 Ga0070678_100089172 Ga0070678_1000891722 472
93 3300005457 Ga0070662_100000007 Ga0070662_100000007100 472
94 3300005718 Ga0068866_10000001 Ga0068866_1000000187 472
95 3300005843 Ga0068860_100009109 Ga0068860_1000091093 472
96 3300007076 Ga0075435_100089293 Ga0075435_1000892932 472
97 3300025899 Ga0207642_10000006 Ga0207642_1000000690 472
98 3300025899 Ga0207642_10000007 Ga0207642_10000007145 472
99 3300025924 Ga0207694_10000004 Ga0207694_10000004753 472
100 3300025933 Ga0207706_10000018 Ga0207706_1000001886 472
101 3300025937 Ga0207669_10000009 Ga0207669_1000000986 472
102 3300026023 Ga0207677_10000046 Ga0207677_1000004639 472
103 3300026121 Ga0207683_10087762 Ga0207683_100877624 472
104 3300028381 Ga0268264_10003178 Ga0268264_100031783 472
105 3300046473 Ga0495582_0000023 Ga0495582_0000023_68585_70036 472
106 3300046514 Ga0495618_0000053 Ga0495618_0000053_23973_25394 472
107 3300046523 Ga0495644_0000995 Ga0495644_0000995_2289_3719 472
108 3300046533 Ga0495640_0007964 Ga0495640_0007964_6654_8075 472
109 3300046536 Ga0495587_0034215 Ga0495587_0034215_1357_2778 472
110 3300046663 Ga0495635_0000042 Ga0495635_0000042_66562_67983 472
111 3300046675 Ga0495657_0007415 Ga0495657_0007415_2222_3643 472
112 3300046683 Ga0495658_0000021 Ga0495658_0000021_68585_70036 472
113 3300046809 Ga0495600_0002447 Ga0495600_0002447_5616_7037 472
114 3300047322 Ga0495680_0001731 Ga0495680_0001731_12881_14302 472
115 3300001979 JGI24740J21852_10000314 JGI24740J21852_100003146 473
116 3300005329 Ga0070683_100006874 Ga0070683_1000068747 473
117 3300005347 Ga0070668_100047393 Ga0070668_1000473932 473
118 3300005367 Ga0070667_100001976 Ga0070667_10000197614 473
119 3300005548 Ga0070665_100081203 Ga0070665_1000812032 473
120 3300005844 Ga0068862_100004102 Ga0068862_1000041026 473
121 3300009553 Ga0105249_10006788 Ga0105249_100067885 473
122 3300011119 Ga0105246_10124333 Ga0105246_101243331 473
123 3300013104 Ga0157370_10171847 Ga0157370_101718471 473
124 3300014968 Ga0157379_10007663 Ga0157379_100076632 473
125 3300025961 Ga0207712_10003089 Ga0207712_100030895 473
126 3300025986 Ga0207658_10000829 Ga0207658_1000082926 473
127 3300028379 Ga0268266_10072896 Ga0268266_100728962 473
128 3300046516 Ga0495628_0000170 Ga0495628_0000170_26243_27673 473
129 3300046516 Ga0495628_0001375 Ga0495628_0001375_5290_6717 473
130 3300046517 Ga0495630_0000026 Ga0495630_0000026_15898_17328 473
131 3300046559 Ga0495667_0109205 Ga0495667_0109205_197_1624 473
132 3300046681 Ga0495647_0001600 Ga0495647_0001600_905_2329 473
133 3300047317 Ga0495604_0000038 Ga0495604_0000038_44882_46306 473
134 3300048088 Ga0495602_0000364 Ga0495602_0000364_27823_29253 473
135 3300048088 Ga0495602_0118442 Ga0495602_0118442_415_1839 473
136 3300048911 Ga0496108_0000001 Ga0496108_0000001_636459_637892 473
137 3300048912 Ga0496109_0000003 Ga0496109_0000003_311005_312438 473
138 3300048915 Ga0496112_0000003 Ga0496112_0000003_279887_281311 473
139 3300053077 Ga0495601_0001634 Ga0495601_0001634_7506_8936 473
140 3300053078 Ga0495612_0000319 Ga0495612_0000319_10228_11658 473
141 3300053085 Ga0495619_0003298 Ga0495619_0003298_2174_3601 473

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF21269

TreT_GT1

Trehalose synthase, N-terminal domain

44

195

0.92

PF13692

Glyco_trans_1_4

Glycosyl transferases group 1

272

429

0.89

PF20706

GT4-conflict

Family 4 Glycosyltransferase in conflict systems

267

421

0.85

PF00534

Glycos_transf_1

Glycosyl transferases group 1

258

426

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
6zmz-assembly1.cif.gz_AAA udpg-bound trehalose transferase from thermoproteus uzoniensis 0.9452 14 468
6zj4-assembly1.cif.gz_AAA apo-trehalose transferase (apo-tret) from thermoproteus uzoniensis 0.939 14 471
6zjh-assembly1.cif.gz_AAA trehalose transferase from thermoproteus uzoniensis soaked with trehalose 0.9368 14 471
6zmz-assembly1.cif.gz_AAA udpg-bound trehalose transferase from thermoproteus uzoniensis 0.936 14 468
6zj7-assembly1.cif.gz_AAA trehalose transferase (tret) from thermoproteus uzoniensis soaked with mg 0.9359 14 471
ID Description Score Start End Superfamily
af_Q9SSP6_536_651_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9453 361 452 3.40.50.2000
2xa1B02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.8766 212 453 3.40.50.2000
2xa1B02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.8724 212 453 3.40.50.2000
af_Q59002_191_368_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.8655 269 448 3.40.50.2000
af_P9WMY7_260_428_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.8615 269 450 3.40.50.2000
ID Description Score Start End GO Terms
AF-A0A7W1QFI6-F1-model_v4 Glycosyltransferase family 4 protein 0.9657 364 472 GO:0016757
AF-A0A7Y4VT92-F1-model_v4 Glycosyltransferase family 4 protein 0.9634 364 471 GO:0016757
AF-A0A6G0FJZ1-F1-model_v4 Glycosyltransferase 0.9612 5 468 GO:0006006
GO:0016757
AF-A0A1G2EZV2-F1-model_v4 Glycosyl transferase family 1 domain-containing protein 0.9496 364 468 GO:0016758
AF-A0A536HCQ7-F1-model_v4 Glycosyltransferase 0.9454 3 404 GO:0016757

Feature Viewer

pLDDT pTM Quality
94.47 0.93 High
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Predicted Structure (AlphaFold2)

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