F182120

General Info

Members Datasets Scaffolds Average Seq Length
141 102 282 274

Family's Representative Sequence

Representative Sequence 3300005937|Ga0081455_10002473|Ga0081455_1000247310
Length 308
Sequence MIGAVSHEDMGNRAGRSQWVRVRVGCHTDGVRTARRPGPTERIRVREWQGDDVVVREDKLATEEPLEIRLSWPGAPARGFVTTMRTPGHDFALATGLAYAEGVFTGIDDVRTVAYCTDVNLLPEQEYNVVSIDLTRPPVRWSERTLAMTSACGVCGKQSIDAVFDIGATEQPIEPTLDARLARSLPDRLREAQRIFDTTGGLHAAGLFDAGGTPLLVREDIGRHNAVDKVVGQRLLDRGRTPPAALAVSGRLGFEIVQKAAVARIPVIVSVGAASSLAVRVADAFGVCLASFVRGDRMVVLTHPDRLH

Samples

Sample ID Description Type Environment
1 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
2 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
3 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
4 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
5 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
6 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
7 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
8 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
9 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
10 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
11 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
12 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
13 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
14 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
15 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
16 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
17 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
18 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
19 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
20 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
21 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
22 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
23 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
24 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
25 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
26 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
27 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
28 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
29 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
31 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
32 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
41 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
43 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
44 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
45 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
46 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
47 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
48 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
49 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
50 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
51 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
52 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
53 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
54 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
55 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
56 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
57 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
58 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
59 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
60 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
61 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
62 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
63 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
64 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
65 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
66 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
67 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
68 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
69 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
70 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
71 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
72 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
73 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
74 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
75 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
76 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
77 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
78 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
79 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
80 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
81 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
82 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
83 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
84 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
85 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
86 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
87 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
88 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
89 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
90 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
91 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
92 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
93 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
94 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
95 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
96 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
97 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
98 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
99 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
100 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
101 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
102 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.84
Nodule 0
Rhizoplane 21.28
Rhizosphere 74.47
Stem 0
Stem Tuber 0
Unclassified 0.71

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0081455_10002473 3300005937 Bacteria 21966
2 Ga0070670_100058785 3300005331 Bacteria 3301
3 Ga0070659_100023321 3300005366 Bacteria 4735
4 Ga0070709_10051703 3300005434 Bacteria 2579
5 Ga0070714_100003146 3300005435 Bacteria 12252
6 Ga0070710_10148205 3300005437 Unclassified 1445
7 Ga0070711_100020303 3300005439 Bacteria 4280
8 Ga0070711_100084465 3300005439 Bacteria 2271
9 Ga0070700_100169358 3300005441 Bacteria 1511
10 Ga0070681_10069914 3300005458 Bacteria 3476
11 Ga0070707_100141835 3300005468 Bacteria 2338
12 Ga0070707_100219376 3300005468 Bacteria 1853
13 Ga0070684_100198899 3300005535 Bacteria 1825
14 Ga0068853_100000826 3300005539 Bacteria 21641
15 Ga0070686_100360230 3300005544 Bacteria 1095
16 Ga0068855_100054316 3300005563 Bacteria 4708
17 Ga0068856_100503004 3300005614 Bacteria 1233
18 Ga0068859_100007968 3300005617 Bacteria 10749
19 Ga0068860_100000795 3300005843 Bacteria 35417
20 Ga0081455_10051135 3300005937 Bacteria 3546
21 Ga0081538_10000036 3300005981 Bacteria 119944
22 Ga0081538_10031717 3300005981 Bacteria 3557
23 Ga0070717_10154757 3300006028 Bacteria 1985
24 Ga0075363_100168738 3300006048 Bacteria 1242
25 Ga0075364_10143125 3300006051 Bacteria 1609
26 Ga0070715_10001112 3300006163 Bacteria 7646
27 Ga0070712_100010810 3300006175 Bacteria 5772
28 Ga0075428_100001304 3300006844 Bacteria 26458
29 Ga0075430_100035241 3300006846 Bacteria 4246
30 Ga0075431_100005941 3300006847 Bacteria 12078
31 Ga0075431_100015428 3300006847 Bacteria 7739
32 Ga0075429_100005737 3300006880 Bacteria 10714
33 Ga0097620_100007967 3300006931 Bacteria 10749
34 Ga0114129_10115570 3300009147 Bacteria 3698
35 Ga0114129_10288386 3300009147 Bacteria 2191
36 Ga0157372_10164853 3300013307 Bacteria 2562
37 Ga0157372_10213782 3300013307 Bacteria 2234
38 Ga0213875_10000102 3300021388 Bacteria 96815
39 Ga0207684_10092454 3300025910 Bacteria 2578
40 Ga0207707_10139502 3300025912 Bacteria 2120
41 Ga0207693_10010824 3300025915 Bacteria 7405
42 Ga0207693_10026495 3300025915 Bacteria 4589
43 Ga0207646_10478258 3300025922 Bacteria 1123
44 Ga0207664_10003736 3300025929 Bacteria 10219
45 Ga0207665_10011910 3300025939 Bacteria 5712
46 Ga0207639_10117976 3300026041 Bacteria 2175
47 Ga0207708_10182767 3300026075 Bacteria 1665
48 Ga0207428_10002497 3300027907 Bacteria 18376
49 Ga0268264_10000797 3300028381 Bacteria 34094
50 Ga0373956_0004207 3300035119 Bacteria 5772
51 Ga0373957_0011400 3300035120 Bacteria 2967
52 Ga0373955_0019600 3300035172 Bacteria 3385
53 Ga0373924_0058815 3300035410 Bacteria 1604
54 Ga0373933_0006044 3300035724 Bacteria 6585
55 Ga0373933_0232532 3300035724 Bacteria 1184
56 Ga0395898_0008013 3300037466 Bacteria 11206
57 Ga0436364_0940223 3300037853 Bacteria 123217
58 Ga0466969_0111309 3300044656 Bacteria 1281
59 Ga0466972_0160632 3300044658 Bacteria 1056
60 Ga0466966_0090361 3300044684 Bacteria 1901
61 Ga0466961_0051420 3300044693 Bacteria 2631
62 Ga0466961_0105845 3300044693 Bacteria 1771
63 Ga0466961_0285052 3300044693 Bacteria 1010
64 Ga0466963_0022111 3300044694 Bacteria 4024
65 Ga0466963_0039158 3300044694 Bacteria 3103
66 Ga0466963_0438677 3300044694 Bacteria 921
67 Ga0466971_0057530 3300044719 Bacteria 1754
68 Ga0466970_0059304 3300044765 Bacteria 2050
69 Ga0466957_0097011 3300044842 Bacteria 1853
70 Ga0466957_0110993 3300044842 Bacteria 1739
71 Ga0466960_0010795 3300044901 Bacteria 3803
72 Ga0466959_0055031 3300045049 Bacteria 2906
73 Ga0466958_0115117 3300045836 Bacteria 1680
74 Ga0466967_0036282 3300045976 Bacteria 4206
75 Ga0466967_0212010 3300045976 Bacteria 1837
76 Ga0466967_0222647 3300045976 Bacteria 1794
77 Ga0495630_0002402 3300046517 Bacteria 12997
78 Ga0495640_0269136 3300046533 Bacteria 1063
79 Ga0495586_0011219 3300046535 Bacteria 4764
80 Ga0495634_0001191 3300046642 Bacteria 24051
81 Ga0495674_0000377 3300047319 Bacteria 39838
82 Ga0496100_0091136 3300048903 Bacteria 2080
83 Ga0496100_0394609 3300048903 Bacteria 1053
84 Ga0496101_0055650 3300048904 Bacteria 2858
85 Ga0496102_0068280 3300048905 Bacteria 3261
86 Ga0496102_0132551 3300048905 Bacteria 2333
87 Ga0496104_0010151 3300048907 Bacteria 8405
88 Ga0496104_0047728 3300048907 Bacteria 4036
89 Ga0496105_0007744 3300048908 Bacteria 8336
90 Ga0496105_0044942 3300048908 Bacteria 3644
91 Ga0496106_0042214 3300048909 Bacteria 3420
92 Ga0496106_0122611 3300048909 Bacteria 2033
93 Ga0496107_0121156 3300048910 Bacteria 1927
94 Ga0496108_0008703 3300048911 Bacteria 8228
95 Ga0496108_0071236 3300048911 Bacteria 2933
96 Ga0496108_0178519 3300048911 Bacteria 1838
97 Ga0496109_0039258 3300048912 Bacteria 4285
98 Ga0496109_0100605 3300048912 Bacteria 2682
99 Ga0496109_0112975 3300048912 Bacteria 2526
100 Ga0496109_0233369 3300048912 Bacteria 1731
101 Ga0496109_0641978 3300048912 Bacteria 998
102 Ga0496110_0049436 3300048913 Bacteria 3689
103 Ga0496112_0310959 3300048915 Bacteria 1521
104 Ga0496112_0735105 3300048915 Bacteria 914
105 Ga0496113_0156266 3300048916 Bacteria 1801
106 Ga0496113_0175547 3300048916 Bacteria 1698
107 Ga0496113_0354639 3300048916 Bacteria 1177
108 Ga0496114_0005612 3300048917 Bacteria 9839
109 Ga0496114_0124281 3300048917 Bacteria 2222
110 Ga0496114_0200996 3300048917 Bacteria 1745
111 Ga0496115_0032002 3300048918 Bacteria 4148
112 Ga0501031_0227800 3300049568 Bacteria 1213
113 Ga0501034_0457921 3300049571 Bacteria 1193
114 Ga0501036_0109025 3300049572 Bacteria 2340
115 Ga0501036_0214064 3300049572 Bacteria 1619
116 Ga0501040_0071411 3300049576 Bacteria 2397
117 Ga0501040_0179219 3300049576 Bacteria 1502
118 Ga0501041_0071961 3300049577 Bacteria 2123
119 Ga0501042_0211768 3300049578 Bacteria 1398
120 Ga0501072_0268030 3300049588 Bacteria 1359
121 Ga0501072_0320493 3300049588 Bacteria 1232
122 Ga0501075_0319280 3300049591 Bacteria 1184
123 Ga0501081_0367352 3300049743 Bacteria 1062
124 Ga0501035_0442019 3300049822 Bacteria 1077
125 Ga0501045_0487109 3300049824 Bacteria 916
126 nmdc:mga03683_93837_c1 3300050489 Bacteria 1311
127 nmdc:mga05p37_440_c1 3300050507 Bacteria 45174
128 nmdc:mga05p37_478532_c1 3300050507 Bacteria 1435
129 nmdc:mga09592_278_c1 3300050508 Bacteria 37149
130 nmdc:mga0qj67_5237_c1 3300050509 Bacteria 9455
131 nmdc:mga06r32_2800_c1 3300050510 Bacteria 15623
132 nmdc:mga06r32_3711_c1 3300050510 Bacteria 13649
133 nmdc:mga06r32_653284_c1 3300050510 Bacteria 1020
134 nmdc:mga08y16_135870_c1 3300050511 Bacteria 2556
135 nmdc:mga0n895_206612_c1 3300050512 Bacteria 1994
136 Ga0495619_0008795 3300053085 Bacteria 6387
137 Ga0500644_0000011 3300053088 Bacteria 125595
138 Ga0501084_0516617 3300054114 Bacteria 1010
139 Ga0590075_016735 3300059424 Bacteria 1805
140 Ga0530510_0099412 3300061734 Bacteria 2127
141 Ga0530510_0155979 3300061734 Bacteria 1687
142 Ga0081455_10002473
143 Ga0070670_100058785
144 Ga0070659_100023321
145 Ga0070709_10051703
146 Ga0070714_100003146
147 Ga0070710_10148205
148 Ga0070711_100020303
149 Ga0070711_100084465
150 Ga0070700_100169358
151 Ga0070681_10069914
152 Ga0070707_100141835
153 Ga0070707_100219376
154 Ga0070684_100198899
155 Ga0068853_100000826
156 Ga0070686_100360230
157 Ga0068855_100054316
158 Ga0068856_100503004
159 Ga0068859_100007968
160 Ga0068860_100000795
161 Ga0081455_10051135
162 Ga0081538_10000036
163 Ga0081538_10031717
164 Ga0070717_10154757
165 Ga0075363_100168738
166 Ga0075364_10143125
167 Ga0070715_10001112
168 Ga0070712_100010810
169 Ga0075428_100001304
170 Ga0075430_100035241
171 Ga0075431_100005941
172 Ga0075431_100015428
173 Ga0075429_100005737
174 Ga0097620_100007967
175 Ga0114129_10115570
176 Ga0114129_10288386
177 Ga0157372_10164853
178 Ga0157372_10213782
179 Ga0213875_10000102
180 Ga0207684_10092454
181 Ga0207707_10139502
182 Ga0207693_10010824
183 Ga0207693_10026495
184 Ga0207646_10478258
185 Ga0207664_10003736
186 Ga0207665_10011910
187 Ga0207639_10117976
188 Ga0207708_10182767
189 Ga0207428_10002497
190 Ga0268264_10000797
191 Ga0373956_0004207
192 Ga0373957_0011400
193 Ga0373955_0019600
194 Ga0373924_0058815
195 Ga0373933_0006044
196 Ga0373933_0232532
197 Ga0395898_0008013
198 Ga0436364_0940223
199 Ga0466969_0111309
200 Ga0466972_0160632
201 Ga0466966_0090361
202 Ga0466961_0051420
203 Ga0466961_0105845
204 Ga0466961_0285052
205 Ga0466963_0022111
206 Ga0466963_0039158
207 Ga0466963_0438677
208 Ga0466971_0057530
209 Ga0466970_0059304
210 Ga0466957_0097011
211 Ga0466957_0110993
212 Ga0466960_0010795
213 Ga0466959_0055031
214 Ga0466958_0115117
215 Ga0466967_0036282
216 Ga0466967_0212010
217 Ga0466967_0222647
218 Ga0495630_0002402
219 Ga0495640_0269136
220 Ga0495586_0011219
221 Ga0495634_0001191
222 Ga0495674_0000377
223 Ga0496100_0091136
224 Ga0496100_0394609
225 Ga0496101_0055650
226 Ga0496102_0068280
227 Ga0496102_0132551
228 Ga0496104_0010151
229 Ga0496104_0047728
230 Ga0496105_0007744
231 Ga0496105_0044942
232 Ga0496106_0042214
233 Ga0496106_0122611
234 Ga0496107_0121156
235 Ga0496108_0008703
236 Ga0496108_0071236
237 Ga0496108_0178519
238 Ga0496109_0039258
239 Ga0496109_0100605
240 Ga0496109_0112975
241 Ga0496109_0233369
242 Ga0496109_0641978
243 Ga0496110_0049436
244 Ga0496112_0310959
245 Ga0496112_0735105
246 Ga0496113_0156266
247 Ga0496113_0175547
248 Ga0496113_0354639
249 Ga0496114_0005612
250 Ga0496114_0124281
251 Ga0496114_0200996
252 Ga0496115_0032002
253 Ga0501031_0227800
254 Ga0501034_0457921
255 Ga0501036_0109025
256 Ga0501036_0214064
257 Ga0501040_0071411
258 Ga0501040_0179219
259 Ga0501041_0071961
260 Ga0501042_0211768
261 Ga0501072_0268030
262 Ga0501072_0320493
263 Ga0501075_0319280
264 Ga0501081_0367352
265 Ga0501035_0442019
266 Ga0501045_0487109
267 nmdc:mga03683_93837_c1
268 nmdc:mga05p37_440_c1
269 nmdc:mga05p37_478532_c1
270 nmdc:mga09592_278_c1
271 nmdc:mga0qj67_5237_c1
272 nmdc:mga06r32_2800_c1
273 nmdc:mga06r32_3711_c1
274 nmdc:mga06r32_653284_c1
275 nmdc:mga08y16_135870_c1
276 nmdc:mga0n895_206612_c1
277 Ga0495619_0008795
278 Ga0500644_0000011
279 Ga0501084_0516617
280 Ga0590075_016735
281 Ga0530510_0099412
282 Ga0530510_0155979

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02634

FdhD-NarQ

FdhD/NarQ family

61

308

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
1a6d-assembly1.cif.gz_B thermosome from t. acidophilum 0.907 241 267
1gn1-assembly3.cif.gz_F crystal structure of the mouse cct gamma apical domain (monoclinic) 0.9046 241 269
1gn1-assembly4.cif.gz_H crystal structure of the mouse cct gamma apical domain (monoclinic) 0.9039 241 269
1gn1-assembly3.cif.gz_E crystal structure of the mouse cct gamma apical domain (monoclinic) 0.899 241 269
1gn1-assembly1.cif.gz_B crystal structure of the mouse cct gamma apical domain (monoclinic) 0.8968 241 269
ID Description Score Start End Superfamily
af_P9WNF1_130_276_3.40.140.10 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.9722 141 283 3.40.140.10
af_A0A1D6J8K2_3_134_3.50.7.10 Alpha Beta;3-Layer(bba) Sandwich;GroEL;GroEL 0.9549 240 267 3.50.7.10
af_Q6ZJN4_246_417_3.50.7.10 Alpha Beta;3-Layer(bba) Sandwich;GroEL;GroEL 0.9494 241 267 3.50.7.10
af_A0A1D8PGH4_1184_1351_3.50.7.10 Alpha Beta;3-Layer(bba) Sandwich;GroEL;GroEL 0.944 241 269 3.50.7.10
af_P9WNF1_130_276_3.40.140.10 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.9398 141 283 3.40.140.10
ID Description Score Start End GO Terms
AF-A0A259SUC5-F1-model_v4 Formate dehydrogenase family accessory protein FdhD 0.9867 186 283 GO:0005737
GO:0006777
GO:0016783
AF-A0A538FDV7-F1-model_v4 Sulfurtransferase FdhD 0.9843 180 283 GO:0005737
GO:0006777
GO:0016783
AF-A0A3N5NTS2-F1-model_v4 Sulfurtransferase FdhD 0.9817 153 283 GO:0005737
GO:0006777
GO:0016783
AF-A0A4Q6E5Y2-F1-model_v4 Formate dehydrogenase accessory sulfurtransferase FdhD 0.9797 147 283 GO:0005737
GO:0006777
GO:0016783
AF-A0A6N7CBQ8-F1-model_v4 Sulfur carrier protein FdhD 0.9797 220 283 GO:0005737
GO:0006777
GO:0016783

Map