F181026

General Info

Members Datasets Scaffolds Average Seq Length
140 113 280 500

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2626541554|2626636504
Length 559
Sequence GCWGTWPTSWQGEAECARAAHDRVGRSRRVCHRRTMRRWLFADQLGPHFLDDPDQPVLLVESTRVLARRRFHRQKAQLLLSALRHRARELGDRCDHRIGATYGEAVADYGEPLEVPDPTSWAARRFVTDLPGVTVVPTAYTATSRDDFSTWAHGGTDQGHSDGHGDGRWDGHGDGRWDGHGDGARGGTGGRRRLLMEDFYRWQRRRFGVLMDGDSPAGGRWNFDHDNRHPPPRRAHLDLPEPWSPSETEVDAEVREHLDRLERDGHAQFRGVDGPRRFAATRAEAGQALDWFVRHRLADFGPYEDAMLAGDWAMAHSTLSPALNLGLLHPLEVVAAAEQAYRRGEAPIASVEGFVRQVLGWREYVWGIYWWAGEDYVERNALGARTPLPRWFADLDADAVGAACLSDVLAGVRERGWVHHIPRLMVLGNWALQRGYDPRALTDFFHESFVDGYAWVMAPNVVGMSQYADGGLMATKPYAAGGAYIHRMSDYCGGCRYHPSHRLGEDACPFTAGYWAFLDRNAGALAANPRLRRPLAGLARLADRAAVTAAEHRRGAGPP

Samples

Sample ID Description Type Environment
1 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
2 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
3 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
4 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
5 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
6 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
7 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
8 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
9 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
10 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
11 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
12 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
13 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
14 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
15 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
16 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
17 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
18 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
19 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
20 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
23 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
24 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
25 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
27 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
28 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
29 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
30 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
31 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
32 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
33 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
34 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
35 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
36 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
37 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
38 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
39 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
40 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
41 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
42 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
43 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
44 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
45 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
46 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
47 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
48 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
49 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
50 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
51 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
52 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
53 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
54 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
55 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
56 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
57 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
58 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
59 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
60 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
61 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
62 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
63 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
64 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
65 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
66 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
67 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
68 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
69 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
70 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
71 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
72 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
73 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
74 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
75 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
76 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
77 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
78 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
79 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
80 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
81 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
82 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
83 2626541554 Frankia sp. AvcI.1 Isolate Nodule
84 2643221567 Phycicoccus sp. Root563 Isolate Unclassified
85 2643221624 Phycicoccus sp. Root101 Isolate Unclassified
86 2643221635 Yonghaparkia sp. Root332 Isolate Unclassified
87 2643221711 Terrabacter sp. Root85 Isolate Unclassified
88 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
89 2728369276 Kineococcus rhizosphaerae DSM 19711 Isolate Rhizosphere
90 2731639228 Motilibacter peucedani DSM 45328 Isolate Rhizosphere
91 2751185725 Microbispora sp. NRRL B-24597 Isolate Unclassified
92 2751185792 Kitasatospora arboriphila NRRL B-24581 Isolate Unclassified
93 2799112218 Motilibacter rhizosphaerae DSM 45622 Isolate Rhizosphere
94 2808606365 Phycicoccus sp. SLBN-51 Isolate Unclassified
95 2811994880 Cellulomonas sp. SLBN-39 Isolate Unclassified
96 2811994882 Terrabacter sp. SLBN-196 Isolate Unclassified
97 2818991318 Humibacillus xanthopallidus SLBN-155 Isolate Unclassified
98 2818991458 Terrabacter sp. 3211 Isolate Rhizosphere
99 2818991462 Terrabacter sp. 3264 Isolate Rhizosphere
100 2818991469 Terrabacter lapilli 3265 Isolate Rhizosphere
101 2858868258 Micromonospora sp. MH33 Isolate Unclassified
102 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
103 2867507094 Micromonospora zingiberis PLAI 1-1 Isolate Unclassified
104 2899259804 Paracoccus aeridis JC501 Isolate Rhizosphere
105 2902582711 Micromonospora sp. AP08 Isolate Unclassified
106 2919446982 Phycicoccus sp. 3266 Isolate Rhizosphere
107 2966921586 Rathayibacter agropyri 617 Isolate Rhizosphere
108 2974315732 Rhodococcus sp. SORGH_AS 301 Isolate Unclassified
109 2984523437 Rhodococcus sp. SORGH_AS303 Isolate Aerial Root
110 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
111 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
112 8003856774 Micromonospora echinofusca MPMI6 Isolate Unclassified
113 8045864390 Aurantimonas endophytica KCTC 52296 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 77.86
Metatranscriptomes 0
Isolates 22.14

Biome Distribution

Category Percentage (%)
Aerial Root 0.71
Bulb 0
Endosphere 2.14
Nodule 0.71
Rhizoplane 8.57
Rhizosphere 64.29
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068868_100008036 3300005338 Bacteria 7543
2 Ga0070674_100074236 3300005356 Bacteria 2413
3 Ga0070667_100071007 3300005367 Bacteria 2965
4 Ga0070678_100039645 3300005456 Bacteria 3325
5 Ga0070672_100064003 3300005543 Bacteria 2905
6 Ga0070665_100036482 3300005548 Bacteria 4945
7 Ga0068856_100181998 3300005614 Bacteria 2115
8 Ga0068852_100003097 3300005616 Bacteria 11578
9 Ga0068859_100018489 3300005617 Bacteria 7004
10 Ga0068858_100062042 3300005842 Bacteria 3456
11 Ga0075364_10033768 3300006051 Bacteria 3296
12 Ga0097620_100018489 3300006931 Bacteria 7004
13 Ga0157369_10135098 3300013105 Bacteria 2612
14 Ga0163162_10027515 3300013306 Bacteria 5623
15 Ga0157375_10038578 3300013308 Bacteria 4586
16 Ga0213876_10011184 3300021384 Bacteria 4797
17 Ga0213875_10006450 3300021388 Bacteria 6155
18 Ga0207642_10009634 3300025899 Bacteria 3369
19 Ga0207687_10005596 3300025927 Bacteria 8305
20 Ga0207690_10070488 3300025932 Bacteria 2408
21 Ga0207691_10136787 3300025940 Bacteria 2160
22 Ga0207640_10052792 3300025981 Bacteria 2650
23 Ga0207677_10014274 3300026023 Bacteria 4633
24 Ga0207703_10026138 3300026035 Bacteria 4594
25 Ga0207683_10019182 3300026121 Bacteria 5840
26 Ga0268265_10123298 3300028380 Bacteria 2139
27 Ga0265328_10002491 3300031239 Bacteria 8261
28 Ga0265331_10000454 3300031250 Bacteria 39677
29 Ga0316579_10036631 3300031691 Bacteria 2264
30 Ga0316576_10000586 3300031727 Bacteria 17338
31 Ga0316576_10009460 3300031727 Bacteria 6291
32 Ga0316576_10042005 3300031727 Bacteria 3294
33 Ga0316576_10062976 3300031727 Bacteria 2721
34 Ga0316576_10165314 3300031727 Bacteria 1669
35 Ga0316577_10030929 3300031733 Bacteria 2989
36 Ga0316574_0009688 3300035398 Bacteria 5408
37 Ga0316574_0091737 3300035398 Bacteria 1937
38 Ga0316574_0101813 3300035398 Bacteria 1839
39 Ga0316581_0022567 3300037588 Bacteria 1856
40 Ga0436364_1230466 3300037853 Bacteria 9754
41 Ga0436364_1390572 3300037853 Bacteria 8403
42 Ga0400483_003955 3300039062 Bacteria 4341
43 Ga0400483_093617 3300039062 Bacteria 11973
44 Ga0400483_239095 3300039062 Bacteria 2988
45 Ga0436365_0267831 3300039437 Bacteria 2628
46 Ga0436365_1115916 3300039437 Bacteria 8290
47 Ga0436363_0189705 3300039450 Bacteria 1625
48 Ga0451789_1261246 3300041443 Bacteria 2158
49 Ga0451793_0987764 3300041452 Bacteria 7841
50 Ga0451802_0738958 3300041460 Bacteria 2354
51 Ga0451837_1212335 3300041494 Bacteria 1346
52 Ga0451839_1020959 3300041496 Bacteria 3020
53 Ga0451843_0404873 3300041509 Bacteria 2073
54 Ga0466966_0121012 3300044684 Bacteria 1608
55 Ga0466963_0014547 3300044694 Bacteria 4855
56 Ga0466963_0058822 3300044694 Bacteria 2564
57 Ga0466970_0011880 3300044765 Bacteria 4442
58 Ga0466960_0052927 3300044901 Bacteria 1966
59 Ga0466958_0034381 3300045836 Bacteria 3024
60 Ga0466967_0000791 3300045976 Bacteria 16512
61 Ga0466967_0201461 3300045976 Bacteria 1885
62 Ga0495638_0033936 3300046460 Bacteria 3260
63 Ga0495668_0002025 3300046616 Bacteria 17678
64 Ga0495625_0000749 3300046660 Bacteria 45382
65 Ga0495683_0067057 3300047323 Bacteria 1767
66 Ga0495626_0000046 3300048091 Bacteria 162660
67 Ga0496101_0026804 3300048904 Bacteria 4007
68 Ga0496102_0036213 3300048905 Bacteria 4445
69 Ga0496103_0034827 3300048906 Bacteria 3080
70 Ga0496103_0052180 3300048906 Bacteria 2533
71 Ga0496104_0007548 3300048907 Bacteria 9618
72 Ga0496105_0004129 3300048908 Bacteria 10887
73 Ga0496108_0009225 3300048911 Bacteria 7985
74 Ga0496109_0007481 3300048912 Bacteria 9253
75 Ga0496113_0073431 3300048916 Bacteria 2606
76 Ga0496126_0000039 3300048929 Bacteria 347353
77 Ga0501031_0000464 3300049568 Bacteria 23491
78 Ga0501032_0001325 3300049569 Bacteria 19757
79 Ga0501032_0007633 3300049569 Bacteria 7887
80 Ga0501032_0019005 3300049569 Bacteria 4808
81 Ga0501033_0001441 3300049570 Bacteria 21121
82 Ga0501033_0013851 3300049570 Bacteria 6135
83 Ga0501034_0002090 3300049571 Bacteria 24950
84 Ga0501034_0002660 3300049571 Bacteria 21135
85 Ga0501034_0044638 3300049571 Bacteria 4481
86 Ga0501036_0001020 3300049572 Bacteria 21136
87 Ga0501037_0000203 3300049573 Bacteria 53647
88 Ga0501037_0016800 3300049573 Bacteria 5384
89 Ga0501038_0002240 3300049574 Bacteria 17978
90 Ga0501039_0000945 3300049575 Bacteria 21135
91 Ga0501043_0004504 3300049579 Bacteria 11323
92 Ga0501046_0001749 3300049580 Bacteria 20736
93 Ga0501047_0001839 3300049581 Bacteria 20472
94 Ga0501047_0151926 3300049581 Bacteria 2191
95 Ga0501048_0013272 3300049582 Bacteria 6114
96 Ga0501069_0008003 3300049585 Bacteria 5551
97 Ga0501069_0058297 3300049585 Bacteria 2153
98 Ga0501070_0002247 3300049586 Bacteria 16967
99 Ga0501070_0160738 3300049586 Bacteria 1852
100 Ga0501080_0077904 3300049742 Bacteria 3083
101 Ga0501035_0001283 3300049822 Bacteria 25941
102 Ga0501035_0001667 3300049822 Bacteria 22461
103 Ga0501035_0002138 3300049822 Bacteria 19636
104 Ga0501035_0016123 3300049822 Bacteria 6894
105 Ga0501044_0000376 3300049823 Bacteria 55707
106 Ga0501044_0002456 3300049823 Bacteria 21135
107 Ga0501044_0008938 3300049823 Bacteria 10949
108 Ga0500643_000301 3300053087 Bacteria 41201
109 Ga0500616_0000753 3300053153 Bacteria 37272
110 2626636504 2626541554 Bacteria 7741902
111 2643852760 2643221567 Bacteria 4163945
112 2644135270 2643221624 Bacteria 4384879
113 2644198375 2643221635 Bacteria 2632343
114 2644610708 2643221711 Bacteria 4865335
115 2676482471 2675903059 Bacteria 8644972
116 2729904827 2728369276 Bacteria 5610032
117 2731908819 2731639228 Bacteria 4187555
118 2753037289 2751185725 Bacteria 5740550
119 2753325158 2751185792 Bacteria 5739090
120 2799184852 2799112218 Bacteria 4315149
121 2808875360 2808606365 Bacteria 4301966
122 2812362033 2811994880 Bacteria 4147780
123 2812375886 2811994882 Bacteria 4688362
124 2819424751 2818991318 Bacteria 5266538
125 2819667129 2818991458 Bacteria 4794049
126 2819690468 2818991462 Bacteria 4320267
127 2819728271 2818991469 Bacteria 4644110
128 2858872220 2858868258 Bacteria 7683772
129 2867307719 2867302475 Bacteria 7087181
130 2867512975 2867507094 Bacteria 6506033
131 2899261507 2899259804 Bacteria 3320927
132 2902584797 2902582711 Bacteria 6187705
133 2919447768 2919446982 Bacteria 3994487
134 2966922956 2966921586 Bacteria 3092803
135 2974316560 2974315732 Bacteria 4602776
136 2984524734 2984523437 Bacteria 4508481
137 2990092956 2990088156 Bacteria 6657676
138 2996225793 2996221748 Bacteria 6799777
139 8003859393 8003856774 Bacteria 7675274
140 8045867551 8045864390 Bacteria 5043873
141 Ga0068868_100008036
142 Ga0070674_100074236
143 Ga0070667_100071007
144 Ga0070678_100039645
145 Ga0070672_100064003
146 Ga0070665_100036482
147 Ga0068856_100181998
148 Ga0068852_100003097
149 Ga0068859_100018489
150 Ga0068858_100062042
151 Ga0075364_10033768
152 Ga0097620_100018489
153 Ga0157369_10135098
154 Ga0163162_10027515
155 Ga0157375_10038578
156 Ga0213876_10011184
157 Ga0213875_10006450
158 Ga0207642_10009634
159 Ga0207687_10005596
160 Ga0207690_10070488
161 Ga0207691_10136787
162 Ga0207640_10052792
163 Ga0207677_10014274
164 Ga0207703_10026138
165 Ga0207683_10019182
166 Ga0268265_10123298
167 Ga0265328_10002491
168 Ga0265331_10000454
169 Ga0316579_10036631
170 Ga0316576_10000586
171 Ga0316576_10009460
172 Ga0316576_10042005
173 Ga0316576_10062976
174 Ga0316576_10165314
175 Ga0316577_10030929
176 Ga0316574_0009688
177 Ga0316574_0091737
178 Ga0316574_0101813
179 Ga0316581_0022567
180 Ga0436364_1230466
181 Ga0436364_1390572
182 Ga0400483_003955
183 Ga0400483_093617
184 Ga0400483_239095
185 Ga0436365_0267831
186 Ga0436365_1115916
187 Ga0436363_0189705
188 Ga0451789_1261246
189 Ga0451793_0987764
190 Ga0451802_0738958
191 Ga0451837_1212335
192 Ga0451839_1020959
193 Ga0451843_0404873
194 Ga0466966_0121012
195 Ga0466963_0014547
196 Ga0466963_0058822
197 Ga0466970_0011880
198 Ga0466960_0052927
199 Ga0466958_0034381
200 Ga0466967_0000791
201 Ga0466967_0201461
202 Ga0495638_0033936
203 Ga0495668_0002025
204 Ga0495625_0000749
205 Ga0495683_0067057
206 Ga0495626_0000046
207 Ga0496101_0026804
208 Ga0496102_0036213
209 Ga0496103_0034827
210 Ga0496103_0052180
211 Ga0496104_0007548
212 Ga0496105_0004129
213 Ga0496108_0009225
214 Ga0496109_0007481
215 Ga0496113_0073431
216 Ga0496126_0000039
217 Ga0501031_0000464
218 Ga0501032_0001325
219 Ga0501032_0007633
220 Ga0501032_0019005
221 Ga0501033_0001441
222 Ga0501033_0013851
223 Ga0501034_0002090
224 Ga0501034_0002660
225 Ga0501034_0044638
226 Ga0501036_0001020
227 Ga0501037_0000203
228 Ga0501037_0016800
229 Ga0501038_0002240
230 Ga0501039_0000945
231 Ga0501043_0004504
232 Ga0501046_0001749
233 Ga0501047_0001839
234 Ga0501047_0151926
235 Ga0501048_0013272
236 Ga0501069_0008003
237 Ga0501069_0058297
238 Ga0501070_0002247
239 Ga0501070_0160738
240 Ga0501080_0077904
241 Ga0501035_0001283
242 Ga0501035_0001667
243 Ga0501035_0002138
244 Ga0501035_0016123
245 Ga0501044_0000376
246 Ga0501044_0002456
247 Ga0501044_0008938
248 Ga0500643_000301
249 Ga0500616_0000753
250 2626636504
251 2643852760
252 2644135270
253 2644198375
254 2644610708
255 2676482471
256 2729904827
257 2731908819
258 2753037289
259 2753325158
260 2799184852
261 2808875360
262 2812362033
263 2812375886
264 2819424751
265 2819667129
266 2819690468
267 2819728271
268 2858872220
269 2867307719
270 2867512975
271 2899261507
272 2902584797
273 2919447768
274 2966922956
275 2974316560
276 2984524734
277 2990092956
278 2996225793
279 8003859393
280 8045867551

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04244

DPRP

Deoxyribodipyrimidine photo-lyase-related protein

182

270

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
5kcm-assembly2.cif.gz_B crystal structure of iron-sulfur cluster containing photolyase phrb mutant i51w 0.9274 6 488
6dd6-assembly1.cif.gz_A crystal structure of bacterial (6-4) photolyase phrb from in situ serial laue diffraction 0.9229 6 492
4dja-assembly1.cif.gz_A crystal structure of a prokaryotic (6-4) photolyase phrb from agrobacterium tumefaciens with an fe-s cluster and a 6,7-dimethyl-8-ribityllumazine antenna chromophore at 1.45a resolution 0.9223 6 492
3zxs-assembly3.cif.gz_C cryptochrome b from rhodobacter sphaeroides 0.9196 6 494
3zxs-assembly2.cif.gz_B cryptochrome b from rhodobacter sphaeroides 0.9196 6 494
ID Description Score Start End Superfamily
3zxsC03 Mainly Alpha;Orthogonal Bundle;DNA Cyclobutane Dipyrimidine Photolyase, subunit A; domain 3;DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 0.9603 308 430 1.10.579.10
3zxsC03 Mainly Alpha;Orthogonal Bundle;DNA Cyclobutane Dipyrimidine Photolyase, subunit A; domain 3;DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 0.945 308 430 1.10.579.10
4djaA02 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat; 0.9014 111 306 1.25.40.80
6dd6A04 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Deoxyribodipyrimidine photolyase-related 0.8932 432 488 1.10.10.1710
3zxsA04 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Deoxyribodipyrimidine photolyase-related 0.8907 432 488 1.10.10.1710
ID Description Score Start End GO Terms
AF-A0A2S8MPW1-F1-model_v4 deleted 0.9982 315 446
AF-A0A840IQ53-F1-model_v4 Deoxyribodipyrimidine photolyase-like uncharacterized protein 0.9981 335 487 GO:0016829
AF-A0A7W3ZQ41-F1-model_v4 Cryptochrome/photolyase family protein 0.9942 277 494 GO:0016829
AF-V6U625-F1-model_v4 deleted 0.9917 242 494
AF-A0A6B3GV20-F1-model_v4 Cryptochrome/photolyase family protein 0.9906 104 494 GO:0016829

Map