F173291

General Info

Members Datasets Scaffolds Average Seq Length
138 101 276 491

Family's Representative Sequence

Representative Sequence 3300025913|Ga0207695_10014131|Ga0207695_100141313
Length 522
Sequence MSSDIEHLFLTCCGEEGRATGYARWSMWLGIDIGTGSSRALLVDESGGVRGTFTAAHEDMRMERPLWAEQRPENWWDAAVQAIRGVLAQSGVHGSQIKGIGLSGQMHGLVILDGANQVIRPSLIWCDQRSQKQVDGVNEKVGRENILRYIANPVLTGFTLPKLLWVRDNEPDNFDRVRKMLLPKDYVRFMLTGEFASEVSDASGTAVFDVVNRRWSFEMMDALGLDRDMLPTCYESSDVTGAITKEVAELTGLAAGTPVVGGGGDQAASAVGNGIVEPGIVSCTLGTSGVVFAHMEKVAYDPTGRVHTFCHAVAEKWHVMGVTQGAGLSLQWLRNRLAAGVSYDSLMEEAATTATGSQGLFWLPYLMGERTPHLDATARGGWIGLTNSHQRADLIRSVVEGVSYSQRDCLQIIEALGIQVNSVRASGGGAQSPFWRGLLSSVLNKRVVTLATQEGSAYGAALLALGGTGPYASVPEVCRVAIRETDTISPVATDAAFYEKGHRIYQSLYTALKPIYSDIAAL

Samples

Sample ID Description Type Environment
1 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
6 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
7 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
8 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
9 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
10 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
11 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
12 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
13 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
14 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
15 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
16 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
17 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
18 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
19 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
20 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
21 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
22 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
23 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
24 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
25 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
26 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
27 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
28 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
29 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
30 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
31 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
32 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
33 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
34 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
35 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
48 3300028017 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4 Metagenome Rhizosphere
49 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
51 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
52 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
53 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
54 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
55 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
56 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
57 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
58 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
59 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
60 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
61 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
62 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
63 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
64 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
65 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
66 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
67 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
68 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
69 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
70 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
71 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
72 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
73 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
74 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
75 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
76 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
77 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
78 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
79 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
80 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
81 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
82 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
83 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
84 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
85 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
86 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
87 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
88 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
89 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
90 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
91 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
92 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
93 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
94 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
95 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
96 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
97 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
98 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
99 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
100 2862993130 Planctomonas deserti 13S1-3 v2 Isolate Rhizosphere
101 2898713307 Sphingobacterium sp. SGG-5 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.55
Metatranscriptomes 0
Isolates 1.45

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.72
Nodule 0
Rhizoplane 0.72
Rhizosphere 89.86
Stem 0
Stem Tuber 0
Unclassified 10.87

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207695_10014131 3300025913 Bacteria 9475
2 Ga0070683_100000011 3300005329 Bacteria 283682
3 Ga0070683_100113452 3300005329 Bacteria 2558
4 Ga0070670_100013928 3300005331 Bacteria 6896
5 Ga0070680_100024927 3300005336 Bacteria 4781
6 Ga0070669_100070660 3300005353 Bacteria 2581
7 Ga0070673_100049192 3300005364 Bacteria 3291
8 Ga0070681_10038313 3300005458 Unclassified 4806
9 Ga0070684_100000001 3300005535 Bacteria 300240
10 Ga0068855_100030223 3300005563 Bacteria 6480
11 Ga0068856_100007475 3300005614 Bacteria 10665
12 Ga0068856_100099677 3300005614 Bacteria 2896
13 Ga0068852_100103707 3300005616 Bacteria 2573
14 Ga0068859_100019076 3300005617 Bacteria 6887
15 Ga0068859_100034828 3300005617 Bacteria 5052
16 Ga0068863_100079680 3300005841 Bacteria 3101
17 Ga0068863_100159765 3300005841 Bacteria 2159
18 Ga0068860_100047166 3300005843 Unclassified 4106
19 Ga0068862_100027912 3300005844 Bacteria 4754
20 Ga0081455_10017145 3300005937 Bacteria 6955
21 Ga0075428_100028583 3300006844 Bacteria 6168
22 Ga0075428_100307478 3300006844 Bacteria 1704
23 Ga0075433_10060269 3300006852 Bacteria 3322
24 Ga0097620_100019075 3300006931 Bacteria 6887
25 Ga0097620_100034828 3300006931 Bacteria 5052
26 Ga0105240_10000782 3300009093 Bacteria 57623
27 Ga0105240_10002103 3300009093 Bacteria 32584
28 Ga0105240_10003712 3300009093 Bacteria 23598
29 Ga0105240_10140388 3300009093 Unclassified 2889
30 Ga0111539_10030390 3300009094 Bacteria 6565
31 Ga0111539_10109729 3300009094 Unclassified 3238
32 Ga0111539_10326645 3300009094 Bacteria 1786
33 Ga0105247_10007187 3300009101 Bacteria 6835
34 Ga0105248_10164061 3300009177 Bacteria 2505
35 Ga0105249_10111186 3300009553 Bacteria 2590
36 Ga0105239_10006720 3300010375 Bacteria 13287
37 Ga0105239_10022762 3300010375 Bacteria 6907
38 Ga0157369_10005007 3300013105 Bacteria 15517
39 Ga0157369_10084959 3300013105 Bacteria 3382
40 Ga0163162_10043060 3300013306 Bacteria 4520
41 Ga0157372_10015918 3300013307 Bacteria 8066
42 Ga0157375_10010186 3300013308 Bacteria 8275
43 Ga0163163_10058461 3300014325 Bacteria 3813
44 Ga0163163_10211223 3300014325 Bacteria 1990
45 Ga0157380_10069429 3300014326 Bacteria 2843
46 Ga0213872_10001061 3300021361 Bacteria 19073
47 Ga0213875_10046930 3300021388 Bacteria 2027
48 Ga0228598_1000433 3300024227 Bacteria 8519
49 Ga0207710_10043270 3300025900 Bacteria 2003
50 Ga0207707_10030796 3300025912 Bacteria 4694
51 Ga0207707_10053286 3300025912 Bacteria 3522
52 Ga0207695_10002722 3300025913 Bacteria 25812
53 Ga0207695_10010475 3300025913 Bacteria 11339
54 Ga0207695_10023665 3300025913 Bacteria 6932
55 Ga0207695_10102256 3300025913 Unclassified 2858
56 Ga0207695_10214546 3300025913 Unclassified 1834
57 Ga0207660_10027513 3300025917 Bacteria 3881
58 Ga0207650_10023993 3300025925 Unclassified 4331
59 Ga0207687_10027589 3300025927 Bacteria 3812
60 Ga0207700_10048074 3300025928 Bacteria 3166
61 Ga0207686_10024543 3300025934 Unclassified 3495
62 Ga0207661_10000016 3300025944 Bacteria 305159
63 Ga0207661_10020077 3300025944 Bacteria 4990
64 Ga0207667_10015480 3300025949 Bacteria 8661
65 Ga0207712_10011226 3300025961 Bacteria 5704
66 Ga0207702_10049731 3300026078 Bacteria 3538
67 Ga0207641_10020637 3300026088 Bacteria 5414
68 Ga0207428_10099686 3300027907 Bacteria 2246
69 Ga0265356_1000446 3300028017 Bacteria 7537
70 Ga0268264_10015452 3300028381 Bacteria 6260
71 Ga0265323_10000865 3300028653 Bacteria 16084
72 Ga0265340_10009853 3300031247 Bacteria 5121
73 Ga0265316_10004457 3300031344 Bacteria 13938
74 Ga0265316_10018744 3300031344 Bacteria 5941
75 Ga0265316_10099630 3300031344 Bacteria 2210
76 Ga0265316_10117042 3300031344 Unclassified 2015
77 Ga0307408_100005506 3300031548 Bacteria 8462
78 Ga0265314_10002451 3300031711 Bacteria 18978
79 Ga0307411_10056170 3300032005 Bacteria 2594
80 Ga0307415_100002245 3300032126 Bacteria 9562
81 Ga0373927_0002214 3300035695 Bacteria 14297
82 Ga0373947_0013766 3300035725 Unclassified 4637
83 Ga0373937_0016761 3300036401 Bacteria 6512
84 Ga0373937_0126273 3300036401 Bacteria 2387
85 Ga0316582_0071063 3300036647 Bacteria 2253
86 Ga0373925_0000796 3300037068 Bacteria 29088
87 Ga0436364_0411648 3300037853 Bacteria 5036
88 Ga0436364_0599965 3300037853 Bacteria 4552
89 Ga0436364_0748068 3300037853 Bacteria 528910
90 Ga0436364_1060622 3300037853 Bacteria 1824
91 Ga0436364_1105375 3300037853 Bacteria 139847
92 Ga0436365_1705051 3300039437 Bacteria 1859
93 Ga0436361_0675789 3300039447 Bacteria 15115
94 Ga0436362_0071391 3300039453 Bacteria 2817
95 Ga0436362_0748012 3300039453 Unclassified 2347
96 Ga0436362_0954923 3300039453 Bacteria 1885
97 Ga0451853_2232272 3300041512 Bacteria 2016
98 Ga0451577_0020829 3300042876 Bacteria 6010
99 Ga0453683_0001741 3300044673 Bacteria 18050
100 Ga0453683_0010140 3300044673 Bacteria 6255
101 Ga0451576_0088952 3300045051 Bacteria 3212
102 Ga0451576_0159223 3300045051 Bacteria 2356
103 Ga0466958_0167394 3300045836 Unclassified 1391
104 Ga0495592_0018145 3300046454 Bacteria 5347
105 Ga0495592_0030494 3300046454 Bacteria 4079
106 Ga0495638_0009758 3300046460 Bacteria 6705
107 Ga0495651_0059795 3300046462 Bacteria 2921
108 Ga0495580_0041320 3300046472 Bacteria 3289
109 Ga0495580_0063467 3300046472 Bacteria 2591
110 Ga0495628_0004237 3300046516 Bacteria 12753
111 Ga0495587_0001148 3300046536 Bacteria 17383
112 Ga0495668_0001196 3300046616 Bacteria 26362
113 Ga0495599_0017601 3300046678 Bacteria 4444
114 Ga0495623_0042119 3300046679 Bacteria 2910
115 Ga0495624_0025331 3300046690 Unclassified 3896
116 Ga0495604_0053748 3300047317 Bacteria 3111
117 Ga0495672_0000950 3300047320 Bacteria 30212
118 Ga0495675_0100639 3300047444 Bacteria 1809
119 Ga0495684_0018972 3300047471 Bacteria 5295
120 Ga0495684_0021863 3300047471 Unclassified 4924
121 Ga0495602_0004288 3300048088 Bacteria 14849
122 Ga0495602_0050575 3300048088 Unclassified 3712
123 Ga0496115_0037426 3300048918 Bacteria 3845
124 Ga0496116_0000948 3300048919 Bacteria 35745
125 Ga0496122_0000101 3300048925 Bacteria 197550
126 Ga0496123_0030439 3300048926 Bacteria 3951
127 Ga0496126_0000448 3300048929 Bacteria 82078
128 Ga0501038_0080690 3300049574 Bacteria 2742
129 Ga0501047_0011933 3300049581 Bacteria 8222
130 Ga0501070_0003788 3300049586 Bacteria 13070
131 Ga0501249_001032 3300049679 Bacteria 5971
132 Ga0501044_0028378 3300049823 Bacteria 5907
133 nmdc:mga08y16_139666_c1 3300050511 Bacteria 2519
134 nmdc:mga0a205_120436_c1 3300050515 Bacteria 2523
135 Ga0500568_0002576 3300053139 Bacteria 10557
136 Ga0501082_0000242 3300060353 Bacteria 47791
137 2862994002 2862993130 Bacteria 3860849
138 2898716145 2898713307 Bacteria 4110805
139 Ga0207695_10014131
140 Ga0070683_100000011
141 Ga0070683_100113452
142 Ga0070670_100013928
143 Ga0070680_100024927
144 Ga0070669_100070660
145 Ga0070673_100049192
146 Ga0070681_10038313
147 Ga0070684_100000001
148 Ga0068855_100030223
149 Ga0068856_100007475
150 Ga0068856_100099677
151 Ga0068852_100103707
152 Ga0068859_100019076
153 Ga0068859_100034828
154 Ga0068863_100079680
155 Ga0068863_100159765
156 Ga0068860_100047166
157 Ga0068862_100027912
158 Ga0081455_10017145
159 Ga0075428_100028583
160 Ga0075428_100307478
161 Ga0075433_10060269
162 Ga0097620_100019075
163 Ga0097620_100034828
164 Ga0105240_10000782
165 Ga0105240_10002103
166 Ga0105240_10003712
167 Ga0105240_10140388
168 Ga0111539_10030390
169 Ga0111539_10109729
170 Ga0111539_10326645
171 Ga0105247_10007187
172 Ga0105248_10164061
173 Ga0105249_10111186
174 Ga0105239_10006720
175 Ga0105239_10022762
176 Ga0157369_10005007
177 Ga0157369_10084959
178 Ga0163162_10043060
179 Ga0157372_10015918
180 Ga0157375_10010186
181 Ga0163163_10058461
182 Ga0163163_10211223
183 Ga0157380_10069429
184 Ga0213872_10001061
185 Ga0213875_10046930
186 Ga0228598_1000433
187 Ga0207710_10043270
188 Ga0207707_10030796
189 Ga0207707_10053286
190 Ga0207695_10002722
191 Ga0207695_10010475
192 Ga0207695_10023665
193 Ga0207695_10102256
194 Ga0207695_10214546
195 Ga0207660_10027513
196 Ga0207650_10023993
197 Ga0207687_10027589
198 Ga0207700_10048074
199 Ga0207686_10024543
200 Ga0207661_10000016
201 Ga0207661_10020077
202 Ga0207667_10015480
203 Ga0207712_10011226
204 Ga0207702_10049731
205 Ga0207641_10020637
206 Ga0207428_10099686
207 Ga0265356_1000446
208 Ga0268264_10015452
209 Ga0265323_10000865
210 Ga0265340_10009853
211 Ga0265316_10004457
212 Ga0265316_10018744
213 Ga0265316_10099630
214 Ga0265316_10117042
215 Ga0307408_100005506
216 Ga0265314_10002451
217 Ga0307411_10056170
218 Ga0307415_100002245
219 Ga0373927_0002214
220 Ga0373947_0013766
221 Ga0373937_0016761
222 Ga0373937_0126273
223 Ga0316582_0071063
224 Ga0373925_0000796
225 Ga0436364_0411648
226 Ga0436364_0599965
227 Ga0436364_0748068
228 Ga0436364_1060622
229 Ga0436364_1105375
230 Ga0436365_1705051
231 Ga0436361_0675789
232 Ga0436362_0071391
233 Ga0436362_0748012
234 Ga0436362_0954923
235 Ga0451853_2232272
236 Ga0451577_0020829
237 Ga0453683_0001741
238 Ga0453683_0010140
239 Ga0451576_0088952
240 Ga0451576_0159223
241 Ga0466958_0167394
242 Ga0495592_0018145
243 Ga0495592_0030494
244 Ga0495638_0009758
245 Ga0495651_0059795
246 Ga0495580_0041320
247 Ga0495580_0063467
248 Ga0495628_0004237
249 Ga0495587_0001148
250 Ga0495668_0001196
251 Ga0495599_0017601
252 Ga0495623_0042119
253 Ga0495624_0025331
254 Ga0495604_0053748
255 Ga0495672_0000950
256 Ga0495675_0100639
257 Ga0495684_0018972
258 Ga0495684_0021863
259 Ga0495602_0004288
260 Ga0495602_0050575
261 Ga0496115_0037426
262 Ga0496116_0000948
263 Ga0496122_0000101
264 Ga0496123_0030439
265 Ga0496126_0000448
266 Ga0501038_0080690
267 Ga0501047_0011933
268 Ga0501070_0003788
269 Ga0501249_001032
270 Ga0501044_0028378
271 nmdc:mga08y16_139666_c1
272 nmdc:mga0a205_120436_c1
273 Ga0500568_0002576
274 Ga0501082_0000242
275 2862994002
276 2898716145

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00370

FGGY_N

FGGY family of carbohydrate kinases, N-terminal domain

27

272

0.98

PF02782

FGGY_C

FGGY family of carbohydrate kinases, C-terminal domain

281

467

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ll3-assembly1.cif.gz_B the crystal structure of ligand bound xylulose kinase from lactobacillus acidophilus 0.956 3 493
3gbt-assembly1.cif.gz_A crystal structure of gluconate kinase from lactobacillus acidophilus 0.9502 3 493
3ll3-assembly1.cif.gz_B the crystal structure of ligand bound xylulose kinase from lactobacillus acidophilus 0.9447 3 493
2nlx-assembly1.cif.gz_A crystal structure of the apo e. coli xylulose kinase 0.939 1 489
3gbt-assembly1.cif.gz_A crystal structure of gluconate kinase from lactobacillus acidophilus 0.9372 3 493
ID Description Score Start End Superfamily
af_P37677_1_241_3.30.420.40 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.9488 1 236 3.30.420.40
3ifrA01 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.9483 2 238 3.30.420.40
5vm1D01 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.9481 2 246 3.30.420.40
af_Q2G205_1_247_3.30.420.40 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.9434 3 239 3.30.420.40
3hz6A01 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.9358 1 246 3.30.420.40
ID Description Score Start End GO Terms
AF-A0A2N2NH27-F1-model_v4 Carbohydrate kinase FGGY N-terminal domain-containing protein 0.9913 2 245 GO:0005975
GO:0016301
AF-A0A7C2J5C0-F1-model_v4 Xylulokinase 0.99 2 253 GO:0005975
GO:0016301
AF-W4VBX3-F1-model_v4 Xylulose kinase 0.9893 139 238 GO:0005975
GO:0016301
AF-A0A7C7V9S0-F1-model_v4 deleted 0.988 2 497
AF-A0A2W4S4K7-F1-model_v4 Xylulose kinase (Xylulokinase) (EC 2.7.1.17) 0.9854 2 494 GO:0004856
GO:0005524
GO:0005998
GO:0042732

Map