F171537

General Info

Members Datasets Scaffolds Average Seq Length
137 114 274 339

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2887443736|2887446771
Length 367
Sequence VASAHDAGAQPRPRLRHSAALAPNGLEPVMKTLHELEEALAAPSDGLIRDMRALDGDLVVLGAGGKLGPSLVSLAVRAIERAGTGATVYAVSRYGSAASREAIERTGAQIVSADLSDDRALDDLPDAANVVFLVGAKFGSTGAEAATWATNAYLPGRVAQRYAGSRIAALSTGNVYPLVPVAGGGSREGDPLGPVGDYAMSCLGRERVLTHLAGTTQTPASLIRLNYAVEMRYGVLVDIAREIMAGRPVDVTTGFANVVWQGYANEVVLRSLLHADVPPFVLNLTGPETISIRQVASQLAERMGREVEFTGEEAPTALLANAARCHGMFGYPALTLDQLIAATADWVAAGGETLGKPTKFQQRDGKF

Samples

Sample ID Description Type Environment
1 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
9 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
10 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
11 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
12 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
13 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
14 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
15 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
16 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
17 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
18 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
19 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
20 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
21 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
22 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
23 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
24 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
25 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
26 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
27 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
28 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
29 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
30 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
31 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
32 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
33 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
34 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
35 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
50 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
52 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
53 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
54 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
55 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
56 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
57 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
58 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
59 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
60 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
61 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
62 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
63 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
64 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
65 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
66 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
67 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
68 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
69 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
70 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
71 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
72 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
73 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
74 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
75 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
76 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
77 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
78 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
79 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
80 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
81 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
82 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
83 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
84 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
85 2887443736 Ruania rhizosphaerae LNNU 22110 Isolate Rhizosphere
86 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
87 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
88 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
89 2643221542 Microbacterium sp. Root1433D1 Isolate Unclassified
90 2643221613 Oerskovia sp. Root22 Isolate Unclassified
91 2643221630 Microbacterium sp. Root322 Isolate Unclassified
92 2643221721 Oerskovia sp. Root918 Isolate Unclassified
93 2675903058 Actinopolymorpha cephalotaxi CPCC 202808 Isolate Rhizosphere
94 2675903060 Nonomuraea wenchangensis CGMCC 4.5598 Isolate Rhizosphere
95 2795385470 Labedaea rhizosphaerae DSM 45361 Isolate Rhizosphere
96 2816332119 Kribbella amoyensis DSM 24683 Isolate Rhizosphere
97 2827628540 Actinopolymorpha cephalotaxi DSM 45117 Isolate Rhizosphere
98 2852663356 Microbacterium sp. JAI119 Isolate Rhizosphere
99 2857723135 Microbacterium sp. R-72356 Isolate Unclassified
100 2858868258 Micromonospora sp. MH33 Isolate Unclassified
101 2858902515 Micromonospora sp. MW-13 Isolate Rhizosphere
102 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
103 2868088558 Phytoactinopolyspora endophytica EGI 60009 Isolate Unclassified
104 2884693830 Nonomuraea phyllanthi WYY166 Isolate Unclassified
105 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
106 2895442618 Nonomuraea phyllanthi PA1-10 Isolate Unclassified
107 2919395869 Microbacterium resistens 2980 Isolate Unclassified
108 2932431166 Cellulosimicrobium sp. 4261 Isolate Rhizosphere
109 2935409751 Agromyces sp. PvR057 Isolate Rhizosphere
110 2935890801 Oerskovia enterophila 3230 Isolate Rhizosphere
111 2946033335 Microbacterium sp. W4I4 Isolate Rhizosphere
112 3006321560 Actinacidiphila epipremni PRB2-1 Isolate Unclassified
113 8003856774 Micromonospora echinofusca MPMI6 Isolate Unclassified
114 8004182704 Microbacterium paraoxydans ku-mp Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 77.37
Metatranscriptomes 0
Isolates 22.63

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.73
Nodule 0
Rhizoplane 2.19
Rhizosphere 72.99
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25154J39366_1003670 3300002738 Bacteria 3102
2 rootH2_10087666 3300003320 Bacteria 5908
3 Ga0070683_100002087 3300005329 Bacteria 15785
4 Ga0070683_100195919 3300005329 Bacteria 1918
5 Ga0068868_100162917 3300005338 Bacteria 1843
6 Ga0070660_100033554 3300005339 Bacteria 3869
7 Ga0070660_100070308 3300005339 Bacteria 2731
8 Ga0070661_100063211 3300005344 Bacteria 2718
9 Ga0070668_100062040 3300005347 Bacteria 2896
10 Ga0070659_100208399 3300005366 Bacteria 1610
11 Ga0070659_100296991 3300005366 Bacteria 1346
12 Ga0070698_100058795 3300005471 Bacteria 3886
13 Ga0070684_100012524 3300005535 Bacteria 6803
14 Ga0068853_100528504 3300005539 Bacteria 1116
15 Ga0070665_100008487 3300005548 Bacteria 10392
16 Ga0068855_100246142 3300005563 Bacteria 1995
17 Ga0070664_100019053 3300005564 Bacteria 5644
18 Ga0068857_100065885 3300005577 Bacteria 3222
19 Ga0068857_100134043 3300005577 Bacteria 2236
20 Ga0068854_100004415 3300005578 Bacteria 8877
21 Ga0068856_100016631 3300005614 Bacteria 7122
22 Ga0068856_100031143 3300005614 Bacteria 5218
23 Ga0068856_100071121 3300005614 Bacteria 3443
24 Ga0068852_100002914 3300005616 Bacteria 11879
25 Ga0068852_100039137 3300005616 Bacteria 3990
26 Ga0068860_100103228 3300005843 Bacteria 2721
27 Ga0070712_100062308 3300006175 Bacteria 2637
28 Ga0068865_100113242 3300006881 Bacteria 2005
29 Ga0105240_10210022 3300009093 Bacteria 2275
30 Ga0111539_10033597 3300009094 Bacteria 6228
31 Ga0105241_10066958 3300009174 Bacteria 2779
32 Ga0105237_10002884 3300009545 Bacteria 20872
33 Ga0105238_10020188 3300009551 Bacteria 6781
34 Ga0105238_10105967 3300009551 Bacteria 2793
35 Ga0105239_10001106 3300010375 Bacteria 37243
36 Ga0105239_10081463 3300010375 Bacteria 3563
37 Ga0105239_10114078 3300010375 Bacteria 2997
38 Ga0157371_10009014 3300013102 Bacteria 7886
39 Ga0157370_10023631 3300013104 Bacteria 6100
40 Ga0157369_10043857 3300013105 Bacteria 4872
41 Ga0171462_1004 3300013250 Bacteria 678877
42 Ga0157372_10023016 3300013307 Bacteria 6751
43 Ga0209646_1000085 3300025246 Bacteria 197351
44 Ga0209051_1019640 3300025303 Bacteria 2940
45 Ga0207647_10137014 3300025904 Bacteria 1436
46 Ga0207705_10072424 3300025909 Bacteria 2499
47 Ga0207654_10078584 3300025911 Bacteria 1980
48 Ga0207671_10000504 3300025914 Bacteria 53102
49 Ga0207693_10057727 3300025915 Bacteria 3041
50 Ga0207657_10027868 3300025919 Bacteria 5166
51 Ga0207657_10030222 3300025919 Bacteria 4920
52 Ga0207649_10030839 3300025920 Bacteria 3180
53 Ga0207649_10152934 3300025920 Bacteria 1591
54 Ga0207679_10070595 3300025945 Bacteria 2632
55 Ga0207667_10007198 3300025949 Bacteria 13423
56 Ga0207667_10301452 3300025949 Bacteria 1637
57 Ga0207668_10018385 3300025972 Bacteria 4397
58 Ga0207640_10055267 3300025981 Bacteria 2600
59 Ga0207640_10132110 3300025981 Bacteria 1806
60 Ga0207639_10121916 3300026041 Bacteria 2143
61 Ga0207702_10049693 3300026078 Bacteria 3539
62 Ga0207674_10000460 3300026116 Bacteria 53277
63 Ga0207674_10002551 3300026116 Bacteria 22933
64 Ga0207428_10115462 3300027907 Bacteria 2062
65 Ga0268266_10000343 3300028379 Bacteria 72589
66 Ga0268266_10180416 3300028379 Bacteria 1922
67 Ga0307515_10067872 3300028794 Bacteria 4910
68 Ga0307406_10160587 3300031901 Bacteria 1615
69 Ga0307407_10128421 3300031903 Bacteria 1618
70 Ga0307414_10109176 3300032004 Bacteria 2101
71 Ga0307507_10124314 3300033179 Bacteria 2049
72 Ga0373930_0005229 3300034816 Bacteria 2150
73 Ga0373932_0086546 3300035112 Bacteria 999
74 Ga0373955_0042969 3300035172 Bacteria 2429
75 Ga0395899_0122594 3300037312 Bacteria 1860
76 Ga0395900_0207166 3300037418 Bacteria 1981
77 Ga0395898_0146176 3300037466 Bacteria 2262
78 Ga0436365_1847618 3300039437 Bacteria 7489
79 Ga0466965_0085975 3300044683 Bacteria 1595
80 Ga0466961_0090610 3300044693 Bacteria 1931
81 Ga0466970_0081566 3300044765 Bacteria 1749
82 Ga0495627_001795 3300046453 Bacteria 11460
83 Ga0495618_0015992 3300046514 Bacteria 4583
84 Ga0495628_0120979 3300046516 Bacteria 2008
85 Ga0495634_0132027 3300046642 Bacteria 1591
86 Ga0495634_0253206 3300046642 Bacteria 1076
87 Ga0495600_0065778 3300046809 Bacteria 2371
88 Ga0495684_0147706 3300047471 Bacteria 1759
89 Ga0496100_0084959 3300048903 Bacteria 2147
90 Ga0496101_0474177 3300048904 Bacteria 988
91 Ga0496102_0153329 3300048905 Bacteria 2166
92 Ga0496117_0000819 3300048920 Bacteria 48200
93 Ga0496117_0003108 3300048920 Bacteria 19840
94 Ga0496118_0016178 3300048921 Bacteria 6857
95 Ga0496118_0085480 3300048921 Bacteria 2196
96 Ga0496120_0115155 3300048923 Bacteria 1398
97 Ga0496122_0039125 3300048925 Bacteria 3786
98 Ga0496122_0076901 3300048925 Bacteria 2347
99 Ga0496123_0054017 3300048926 Bacteria 2649
100 Ga0496125_0002736 3300048928 Bacteria 22344
101 Ga0496125_0008499 3300048928 Bacteria 10737
102 Ga0496125_0012288 3300048928 Bacteria 8508
103 Ga0496126_0006603 3300048929 Bacteria 12914
104 Ga0501031_0016204 3300049568 Bacteria 4841
105 Ga0501047_0016804 3300049581 Bacteria 6991
106 nmdc:mga08y16_24617_c1 3300050511 Bacteria 6353
107 2887446771 2887443736 Bacteria 4426037
108 2515854129 2515154155 Bacteria 7985436
109 2616906779 2616644941 Bacteria 8510691
110 2623588292 2622736626 Bacteria 7181580
111 2643733191 2643221542 Bacteria 3563959
112 2644082663 2643221613 Bacteria 4622396
113 2644172285 2643221630 Bacteria 3601215
114 2644665525 2643221721 Bacteria 4486924
115 2676475327 2675903058 Bacteria 6822861
116 2676488212 2675903060 Bacteria 10051191
117 2795785300 2795385470 Bacteria 8317180
118 2816427707 2816332119 Bacteria 8120218
119 2827629741 2827628540 Bacteria 6858585
120 2852667315 2852663356 Bacteria 4090475
121 2857725473 2857723135 Bacteria 4217853
122 2858874625 2858868258 Bacteria 7683772
123 2858908574 2858902515 Bacteria 7086037
124 2867305636 2867302475 Bacteria 7087181
125 2868094066 2868088558 Bacteria 7609351
126 2884701257 2884693830 Bacteria 11273186
127 2887445817 2887443736 Bacteria 4426037
128 2895434743 2895427314 Bacteria 13147766
129 2895442852 2895442618 Bacteria 11027144
130 2919397556 2919395869 Bacteria 3704152
131 2932434378 2932431166 Bacteria 4215299
132 2935412560 2935409751 Bacteria 4179611
133 2935893037 2935890801 Bacteria 4593001
134 2946035507 2946033335 Bacteria 3835514
135 3006322961 3006321560 Bacteria 8247479
136 8003856922 8003856774 Bacteria 7675274
137 8004182933 8004182704 Bacteria 3391155
138 JGI25154J39366_1003670
139 rootH2_10087666
140 Ga0070683_100002087
141 Ga0070683_100195919
142 Ga0068868_100162917
143 Ga0070660_100033554
144 Ga0070660_100070308
145 Ga0070661_100063211
146 Ga0070668_100062040
147 Ga0070659_100208399
148 Ga0070659_100296991
149 Ga0070698_100058795
150 Ga0070684_100012524
151 Ga0068853_100528504
152 Ga0070665_100008487
153 Ga0068855_100246142
154 Ga0070664_100019053
155 Ga0068857_100065885
156 Ga0068857_100134043
157 Ga0068854_100004415
158 Ga0068856_100016631
159 Ga0068856_100031143
160 Ga0068856_100071121
161 Ga0068852_100002914
162 Ga0068852_100039137
163 Ga0068860_100103228
164 Ga0070712_100062308
165 Ga0068865_100113242
166 Ga0105240_10210022
167 Ga0111539_10033597
168 Ga0105241_10066958
169 Ga0105237_10002884
170 Ga0105238_10020188
171 Ga0105238_10105967
172 Ga0105239_10001106
173 Ga0105239_10081463
174 Ga0105239_10114078
175 Ga0157371_10009014
176 Ga0157370_10023631
177 Ga0157369_10043857
178 Ga0171462_1004
179 Ga0157372_10023016
180 Ga0209646_1000085
181 Ga0209051_1019640
182 Ga0207647_10137014
183 Ga0207705_10072424
184 Ga0207654_10078584
185 Ga0207671_10000504
186 Ga0207693_10057727
187 Ga0207657_10027868
188 Ga0207657_10030222
189 Ga0207649_10030839
190 Ga0207649_10152934
191 Ga0207679_10070595
192 Ga0207667_10007198
193 Ga0207667_10301452
194 Ga0207668_10018385
195 Ga0207640_10055267
196 Ga0207640_10132110
197 Ga0207639_10121916
198 Ga0207702_10049693
199 Ga0207674_10000460
200 Ga0207674_10002551
201 Ga0207428_10115462
202 Ga0268266_10000343
203 Ga0268266_10180416
204 Ga0307515_10067872
205 Ga0307406_10160587
206 Ga0307407_10128421
207 Ga0307414_10109176
208 Ga0307507_10124314
209 Ga0373930_0005229
210 Ga0373932_0086546
211 Ga0373955_0042969
212 Ga0395899_0122594
213 Ga0395900_0207166
214 Ga0395898_0146176
215 Ga0436365_1847618
216 Ga0466965_0085975
217 Ga0466961_0090610
218 Ga0466970_0081566
219 Ga0495627_001795
220 Ga0495618_0015992
221 Ga0495628_0120979
222 Ga0495634_0132027
223 Ga0495634_0253206
224 Ga0495600_0065778
225 Ga0495684_0147706
226 Ga0496100_0084959
227 Ga0496101_0474177
228 Ga0496102_0153329
229 Ga0496117_0000819
230 Ga0496117_0003108
231 Ga0496118_0016178
232 Ga0496118_0085480
233 Ga0496120_0115155
234 Ga0496122_0039125
235 Ga0496122_0076901
236 Ga0496123_0054017
237 Ga0496125_0002736
238 Ga0496125_0008499
239 Ga0496125_0012288
240 Ga0496126_0006603
241 Ga0501031_0016204
242 Ga0501047_0016804
243 nmdc:mga08y16_24617_c1
244 2887446771
245 2515854129
246 2616906779
247 2623588292
248 2643733191
249 2644082663
250 2644172285
251 2644665525
252 2676475327
253 2676488212
254 2795785300
255 2816427707
256 2827629741
257 2852667315
258 2857725473
259 2858874625
260 2858908574
261 2867305636
262 2868094066
263 2884701257
264 2887445817
265 2895434743
266 2895442852
267 2919397556
268 2932434378
269 2935412560
270 2935893037
271 2946035507
272 3006322961
273 8003856922
274 8004182933

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05368

NmrA

NmrA-like family

58

147

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
6d2v-assembly1.cif.gz_A apo structure of terb, an nadp dependent oxidoreductase in the terfestatin biosynthesis pathway 0.8524 28 320
6zlj-assembly1.cif.gz_B-2 crystal structure of udp-glucuronic acid 4-epimerase y149f mutant from bacillus cereus in complex with udp-4-deoxy-4-fluoro-glucuronic acid and nad 0.827 33 325
8du1-assembly2.cif.gz_B crystal structure of nad bound dtdp-glucose 4,6-dehydratase from elizabethkingia anophelis 0.8231 30 326
8du1-assembly2.cif.gz_D crystal structure of nad bound dtdp-glucose 4,6-dehydratase from elizabethkingia anophelis 0.8196 32 326
6zlk-assembly2.cif.gz_B equilibrium structure of udp-glucuronic acid 4-epimerase from bacillus cereus in complex with udp-glucuronic acid/udp-galacturonic acid and nad 0.8194 33 325
ID Description Score Start End Superfamily
6dntA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8334 31 261 3.40.50.720
3eheB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8299 34 261 3.40.50.720
af_Q2G1K4_2_342_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8266 32 291 3.40.50.720
6dntA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8183 31 261 3.40.50.720
3eheB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8182 34 261 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A1T3P8V9-F1-model_v4 Epimerase 0.9965 7 344
AF-A0A6N2IBY0-F1-model_v4 Epimerase 0.9921 88 344
AF-A0A163QY25-F1-model_v4 NAD-dependent epimerase/dehydratase domain-containing protein 0.9915 4 344
AF-A0A7V9BBW9-F1-model_v4 NAD(P)-dependent oxidoreductase 0.9915 165 344
AF-A0A7V8NVD7-F1-model_v4 NAD-dependent epimerase/dehydratase family protein 0.991 6 344

Map