F171470

General Info

Members Datasets Scaffolds Average Seq Length
137 117 274 371

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2554235005|2554261051
Length 396
Sequence TFVGTALTSALLLATAALGLSPASAASPTPSDSSVSASSPADGRGAAAARAGEALSPGLLTAMRRDLGLTEAQAADRLRAETAARGVEGPARRAAGSAYGGSWFEADSGRLTVAVTDSARRAAVEATGADAVVVRHTAQQLDTAKARIDRLKAPAGVASWHVDPEANTVAVNVVATHRDDAAVRAFLTHARQAGPVTVRTTGDVPRTFAAGTVGGDPYYTGNVRCSIGFSVHGGFVTAGHCGGQGAAVYGWDRSYIGTFQGSSFPENDYAWVSVGSGWWTVPVVLGWGTVPDQLVRGSAEAPIGASVCRSGSTTRWHCGVVLTKNETVNYSQGPVRQMTKTSVCAEPGDSGGSFISGDQAQGVTSGGWGNCSGGGQTWHQPVNEILNRYGLRLHTA

Samples

Sample ID Description Type Environment
1 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
2 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
3 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
4 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
5 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
6 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
7 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
8 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
9 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
10 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
11 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
12 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
13 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
14 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
15 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
16 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
17 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
18 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
19 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
20 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
21 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
22 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
23 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
24 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
25 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
26 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
27 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
28 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
29 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
30 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
31 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
32 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
33 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
34 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
35 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
36 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
37 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
38 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
39 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
40 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
41 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
42 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
43 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
44 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
45 2554235005 Streptomyces violaceusniger SPC6 Isolate Rhizosphere
46 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
47 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
48 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
49 2643221548 Streptomyces sp. Root55 Isolate Unclassified
50 2643221578 Streptomyces sp. Root63 Isolate Unclassified
51 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
52 2643221647 Streptomyces sp. Root369 Isolate Unclassified
53 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
54 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
55 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
56 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
57 2751185734 Saccharothrix sp. NRRL B-16314 Isolate Rhizosphere
58 2767802112 Streptomyces avicenniae NRRL B-24776 Isolate Rhizosphere
59 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
60 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
61 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
62 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
63 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
64 2795385470 Labedaea rhizosphaerae DSM 45361 Isolate Rhizosphere
65 2802429296 Streptomyces sampsonii KJ40 Isolate Rhizosphere
66 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
67 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
68 2808606448 Streptomyces sp. 193411 Isolate Unclassified
69 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
70 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
71 2816332119 Kribbella amoyensis DSM 24683 Isolate Rhizosphere
72 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
73 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
74 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
75 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
76 2862574272 Streptomyces sp. AcE210 Isolate Nodule
77 2862705112 Streptomyces triticirhizae NEAU-YY642 Isolate Rhizosphere
78 2866612099 Amycolatopsis suaedae 8-3EHSu Isolate Unclassified
79 2867346516 Streptomyces radicis AZ1-7 Isolate Unclassified
80 2867369537 Streptomyces sp. Z26 Isolate Unclassified
81 2867428634 Streptomyces sp. RP5T Isolate Unclassified
82 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
83 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
84 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
85 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
86 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
87 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
88 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
89 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
90 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
91 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
92 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
93 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
94 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
95 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
96 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
97 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
98 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
99 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
100 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
101 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
102 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
103 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
104 2990044586 Streptomyces sedi JCM 16909 Isolate Unclassified
105 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
106 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
107 8008485437 Streptomyces mimosae 3MP-10 Isolate Unclassified
108 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
109 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
110 8025524527 Streptomyces sp. 3MP-14 Isolate Unclassified
111 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
112 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified
113 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
114 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
115 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
116 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
117 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 46.72
Metatranscriptomes 0
Isolates 53.28

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.73
Nodule 0.73
Rhizoplane 2.19
Rhizosphere 66.42
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0183367_1003 3300015688 Bacteria 814276
2 Ga0307515_10063144 3300028794 Bacteria 5211
3 Ga0307515_10247539 3300028794 Bacteria 1541
4 Ga0307512_10030317 3300030522 Bacteria 4707
5 Ga0316177_1105529 3300030731 Bacteria 1632
6 Ga0316176_1016709 3300030732 Bacteria 4640
7 Ga0307513_10038878 3300031456 Bacteria 5280
8 Ga0307513_10041907 3300031456 Bacteria 5047
9 Ga0307513_10065813 3300031456 Bacteria 3812
10 Ga0307513_10211597 3300031456 Bacteria 1769
11 Ga0307508_10002311 3300031616 Bacteria 20242
12 Ga0307508_10008135 3300031616 Bacteria 9719
13 Ga0307518_10062724 3300031838 Bacteria 2699
14 Ga0395898_0072058 3300037466 Bacteria 3338
15 Ga0451837_0588488 3300041494 Bacteria 2118
16 Ga0439448_0007692 3300042005 Bacteria 3133
17 Ga0439458_0005954 3300042157 Bacteria 2730
18 Ga0466965_0012932 3300044683 Bacteria 3931
19 Ga0466961_0242063 3300044693 Bacteria 1109
20 Ga0466970_0064646 3300044765 Bacteria 1962
21 Ga0466960_0073722 3300044901 Bacteria 1704
22 Ga0466960_0159826 3300044901 Bacteria 1209
23 Ga0495603_0000571 3300046455 Bacteria 20689
24 Ga0495603_0001344 3300046455 Bacteria 14284
25 Ga0495603_0004146 3300046455 Bacteria 8634
26 Ga0495629_0000624 3300046459 Bacteria 28792
27 Ga0495629_0005560 3300046459 Bacteria 9410
28 Ga0495629_0016552 3300046459 Bacteria 5292
29 Ga0495662_0001506 3300046476 Bacteria 11563
30 Ga0495585_0089426 3300046492 Bacteria 1660
31 Ga0495594_0000751 3300046499 Bacteria 16623
32 Ga0495594_0054731 3300046499 Bacteria 2199
33 Ga0495594_0113276 3300046499 Bacteria 1530
34 Ga0495631_0118037 3300046518 Bacteria 1141
35 Ga0495625_0085838 3300046660 Bacteria 2184
36 Ga0495588_0001479 3300046674 Bacteria 10086
37 Ga0495588_0003878 3300046674 Bacteria 6550
38 Ga0495613_0001258 3300046689 Bacteria 19301
39 Ga0495613_0003575 3300046689 Bacteria 11649
40 Ga0495613_0033869 3300046689 Bacteria 3794
41 Ga0495649_0073413 3300046694 Bacteria 1833
42 Ga0495636_0039813 3300047318 Bacteria 1947
43 Ga0495676_0003552 3300047321 Bacteria 14134
44 Ga0495676_0005717 3300047321 Bacteria 11403
45 Ga0495685_002425 3300047447 Bacteria 5840
46 Ga0495685_014010 3300047447 Bacteria 2721
47 Ga0495685_018474 3300047447 Bacteria 2394
48 Ga0495614_0000989 3300048089 Bacteria 12090
49 Ga0495614_0034308 3300048089 Bacteria 2182
50 Ga0496104_0146478 3300048907 Bacteria 2268
51 Ga0496109_0025843 3300048912 Bacteria 5233
52 Ga0501031_0121594 3300049568 Bacteria 1706
53 Ga0501032_0092480 3300049569 Bacteria 2007
54 Ga0501033_0157779 3300049570 Bacteria 1634
55 Ga0501034_0155772 3300049571 Bacteria 2258
56 Ga0501036_0075721 3300049572 Bacteria 2846
57 Ga0501038_0005379 3300049574 Bacteria 11893
58 Ga0501043_0101928 3300049579 Bacteria 2256
59 Ga0501047_0057678 3300049581 Bacteria 3755
60 Ga0501072_0276934 3300049588 Bacteria 1335
61 Ga0501080_0182030 3300049742 Bacteria 1933
62 Ga0501044_0028163 3300049823 Bacteria 5930
63 Ga0501044_0048060 3300049823 Bacteria 4410
64 nmdc:mga04h51_12584_c1 3300050495 Bacteria 2378
65 2554261051 2554235005 Bacteria 6457341
66 2547405514 2547132111 Bacteria 8013147
67 2585306444 2582581313 Bacteria 10042643
68 2616904311 2616644941 Bacteria 8510691
69 2643766036 2643221548 Bacteria 8053412
70 2643901492 2643221578 Bacteria 9213798
71 2643946956 2643221587 Bacteria 7586415
72 2644270389 2643221647 Bacteria 10741251
73 2644407638 2643221673 Bacteria 9196637
74 2644435136 2643221677 Bacteria 7584031
75 2644441127 2643221678 Bacteria 9540101
76 2644461350 2643221682 Bacteria 6743283
77 2753076527 2751185734 Bacteria 8863695
78 2768645446 2767802112 Bacteria 6465194
79 2784585902 2784132148 Bacteria 8627943
80 2785366537 2784746768 Bacteria 10036182
81 2786667595 2786546132 Bacteria 10419719
82 2791914212 2791354901 Bacteria 8322202
83 2793975737 2791355406 Bacteria 11364898
84 2795781777 2795385470 Bacteria 8317180
85 2804843458 2802429296 Bacteria 7227771
86 2808846595 2808606359 Bacteria 9866990
87 2808917903 2808606375 Bacteria 9466072
88 2809229402 2808606448 Bacteria 8656184
89 2812361836 2811994879 Bacteria 9313447
90 2812483168 2811994917 Bacteria 7761064
91 2816428050 2816332119 Bacteria 8120218
92 2819695904 2818991463 Bacteria 7948711
93 2862282639 2862281513 Bacteria 9621493
94 2862290993 2862290372 Bacteria 7471434
95 2862515801 2862507626 Bacteria 9425308
96 2862575091 2862574272 Bacteria 10567477
97 2862709872 2862705112 Bacteria 6563286
98 2866614896 2866612099 Bacteria 7543886
99 2867351197 2867346516 Bacteria 7608576
100 2867372266 2867369537 Bacteria 6501581
101 2867429907 2867428634 Bacteria 9590268
102 2870723552 2870721527 Bacteria 9689237
103 2873158348 2873151551 Bacteria 8625867
104 2875398093 2875391855 Bacteria 7600475
105 2877684002 2877676314 Bacteria 9512378
106 2912715376 2912715099 Bacteria 9460473
107 2912759369 2912757875 Bacteria 7940295
108 2918508258 2918501144 Bacteria 8668083
109 2919468918 2919468124 Bacteria 9133025
110 2946046382 2946045630 Bacteria 8527308
111 2946064314 2946064051 Bacteria 8957905
112 2954389312 2954380949 Bacteria 10050426
113 2954673735 2954673503 Bacteria 9685905
114 2954690255 2954682443 Bacteria 9862841
115 2954700087 2954691527 Bacteria 10720516
116 2954702133 2954701450 Bacteria 10834262
117 2954718899 2954711539 Bacteria 10867210
118 2954728869 2954721474 Bacteria 10456478
119 2954732943 2954731030 Bacteria 10243860
120 2954747768 2954740390 Bacteria 10229294
121 2954751820 2954749733 Bacteria 10366972
122 2954766891 2954759201 Bacteria 9358192
123 2966599195 2966598605 Bacteria 7676064
124 2990049509 2990044586 Bacteria 6603797
125 3006396909 3006393351 Bacteria 6615579
126 3006494020 3006493962 Bacteria 8825450
127 8008489411 8008485437 Bacteria 7198341
128 8023627811 8023623736 Bacteria 8593882
129 8025418612 8025413630 Bacteria 7014048
130 8025529013 8025524527 Bacteria 7197316
131 8025535517 8025530807 Bacteria 8495698
132 8047714845 8047710418 Bacteria 11023148
133 8047894324 8047893842 Bacteria 11723082
134 8048130317 8048127548 Bacteria 11053136
135 8048364729 8048356638 Bacteria 11044339
136 8048371340 8048369669 Bacteria 11666822
137 8048380141 8048379754 Bacteria 11877923
138 Ga0183367_1003
139 Ga0307515_10063144
140 Ga0307515_10247539
141 Ga0307512_10030317
142 Ga0316177_1105529
143 Ga0316176_1016709
144 Ga0307513_10038878
145 Ga0307513_10041907
146 Ga0307513_10065813
147 Ga0307513_10211597
148 Ga0307508_10002311
149 Ga0307508_10008135
150 Ga0307518_10062724
151 Ga0395898_0072058
152 Ga0451837_0588488
153 Ga0439448_0007692
154 Ga0439458_0005954
155 Ga0466965_0012932
156 Ga0466961_0242063
157 Ga0466970_0064646
158 Ga0466960_0073722
159 Ga0466960_0159826
160 Ga0495603_0000571
161 Ga0495603_0001344
162 Ga0495603_0004146
163 Ga0495629_0000624
164 Ga0495629_0005560
165 Ga0495629_0016552
166 Ga0495662_0001506
167 Ga0495585_0089426
168 Ga0495594_0000751
169 Ga0495594_0054731
170 Ga0495594_0113276
171 Ga0495631_0118037
172 Ga0495625_0085838
173 Ga0495588_0001479
174 Ga0495588_0003878
175 Ga0495613_0001258
176 Ga0495613_0003575
177 Ga0495613_0033869
178 Ga0495649_0073413
179 Ga0495636_0039813
180 Ga0495676_0003552
181 Ga0495676_0005717
182 Ga0495685_002425
183 Ga0495685_014010
184 Ga0495685_018474
185 Ga0495614_0000989
186 Ga0495614_0034308
187 Ga0496104_0146478
188 Ga0496109_0025843
189 Ga0501031_0121594
190 Ga0501032_0092480
191 Ga0501033_0157779
192 Ga0501034_0155772
193 Ga0501036_0075721
194 Ga0501038_0005379
195 Ga0501043_0101928
196 Ga0501047_0057678
197 Ga0501072_0276934
198 Ga0501080_0182030
199 Ga0501044_0028163
200 Ga0501044_0048060
201 nmdc:mga04h51_12584_c1
202 2554261051
203 2547405514
204 2585306444
205 2616904311
206 2643766036
207 2643901492
208 2643946956
209 2644270389
210 2644407638
211 2644435136
212 2644441127
213 2644461350
214 2753076527
215 2768645446
216 2784585902
217 2785366537
218 2786667595
219 2791914212
220 2793975737
221 2795781777
222 2804843458
223 2808846595
224 2808917903
225 2809229402
226 2812361836
227 2812483168
228 2816428050
229 2819695904
230 2862282639
231 2862290993
232 2862515801
233 2862575091
234 2862709872
235 2866614896
236 2867351197
237 2867372266
238 2867429907
239 2870723552
240 2873158348
241 2875398093
242 2877684002
243 2912715376
244 2912759369
245 2918508258
246 2919468918
247 2946046382
248 2946064314
249 2954389312
250 2954673735
251 2954690255
252 2954700087
253 2954702133
254 2954718899
255 2954728869
256 2954732943
257 2954747768
258 2954751820
259 2954766891
260 2966599195
261 2990049509
262 3006396909
263 3006494020
264 8008489411
265 8023627811
266 8025418612
267 8025529013
268 8025535517
269 8047714845
270 8047894324
271 8048130317
272 8048364729
273 8048371340
274 8048380141

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02983

Pro_Al_protease

Alpha-lytic protease prodomain

136

194

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
2ea3-assembly1.cif.gz_A crystal structure of cellulomonas bogoriensis chymotrypsin 0.831 179 363
1hpg-assembly1.cif.gz_A a glutamic acid specific serine protease utilizes a novel histidine triad in substrate binding 0.8218 179 361
2ea3-assembly1.cif.gz_A crystal structure of cellulomonas bogoriensis chymotrypsin 0.8188 179 363
5wot-assembly1.cif.gz_A nmr solution structure of a-lytic protease using two 4d-spectra 0.8031 201 363
2pfe-assembly1.cif.gz_A crystal structure of thermobifida fusca protease a (tfpa) 0.8023 178 363
ID Description Score Start End Superfamily
2pfeB02 Mainly Beta;Beta Barrel;Thrombin, subunit H;Trypsin-like serine proteases 0.9093 262 348 2.40.10.10
1hpgA02 Mainly Beta;Beta Barrel;Thrombin, subunit H;Trypsin-like serine proteases 0.8483 255 348 2.40.10.10
5mrrA02 Mainly Beta;Beta Barrel;Thrombin, subunit H;Trypsin-like serine proteases 0.8404 262 347 2.40.10.10
1hpgA02 Mainly Beta;Beta Barrel;Thrombin, subunit H;Trypsin-like serine proteases 0.8016 255 348 2.40.10.10
2pfeB02 Mainly Beta;Beta Barrel;Thrombin, subunit H;Trypsin-like serine proteases 0.7983 262 348 2.40.10.10
ID Description Score Start End GO Terms
AF-A0A2P9ITC6-F1-model_v4 deleted 0.9213 263 363
AF-A0A6G3XJ77-F1-model_v4 S1 family peptidase 0.9177 274 349 GO:0004252
GO:0006508
AF-A0A239PCY3-F1-model_v4 Trypsin 0.914 262 363 GO:0004252
GO:0006508
AF-A0A3D9N2P4-F1-model_v4 deleted 0.9123 263 363
AF-A0A239D5U7-F1-model_v4 Trypsin 0.9095 262 361 GO:0004252
GO:0006508

Map