F164549

General Info

Members Datasets Scaffolds Average Seq Length
135 106 270 631

Family's Representative Sequence

Representative Sequence 3300048928|Ga0496125_0002172|Ga0496125_0002172_1659_3743
Length 694
Sequence LYQTALIFRSVRRNLVLERSMPASDDVPTTNFSPRPERRYPVGAECLGAGVSFRVWAPAQDSVSILLADGRMHAMRAEPGGYFRIDLEGIGPGTLYRLRLGSEAEPVADPASRYQPEGPDGYSAVVDPQRFAWTDDGWRGLKAQGQVLYEMHIGTFTQEGTYAAATERLGVLKDIGITCIEVMPLNEFYGAFGWGYDGVLPYAPTRLYGTPDELRSFIDTAHRLELGVILDVVYNHLGAGGRFKAFSPDYFTERYRNEWGCSVNFDGENSAGVRAFFAKNAAYWIDEYHFDGLRLDATQALNDASDEHIMALVAREARAAARSRSIYLVAENEPQDTRLVRPHGQSGYGLNALWNDDFHHSAMVALTGRSEAYYHDHRGRAQEFVSSAKYGYLFQGQRYDWQDAPRGQPGLDLAPETFVHFLQNHDQIANSGSGCRMDRLASPARVRAITALLLLGPQTPLLFQGQEFGASSPFFYFADQAGGLAETVREGRIEFLKQFPSLSDDAFARWMPAPANRATFERSKLDWSQYKTNTLIVALHRDLIALRRQSYVLAQGTCGRVDGSVLEPSAFLLRHFARDPKDERLMVVNLGPDIAVDSIADPLHAPPEGMQWALVWSSENLVYGGGGIRPVDLQGRWTLGADTLLWFAPVVAERRAMPDRERLVAWQSQISNGCRLDIAGAGERSAPISAPDDR

Samples

Sample ID Description Type Environment
1 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
2 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
5 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
6 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
7 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
8 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
9 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
10 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
11 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
12 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
13 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
14 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
15 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
21 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
22 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
23 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
24 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
25 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
26 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
27 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
28 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
29 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
30 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
31 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
32 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
33 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
35 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
36 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
38 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
39 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
40 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
41 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
42 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
43 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
44 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
45 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
46 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
47 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
48 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
49 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
50 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
51 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
52 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
53 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
69 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
70 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
71 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
72 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
73 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
74 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
75 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
76 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
77 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
78 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
79 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
80 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
81 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
82 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
83 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
84 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
85 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
86 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
87 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
88 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
89 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
90 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
91 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
92 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
93 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
94 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
95 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
96 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
97 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
98 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
99 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
100 2534681796 Rhizobium grahamii CCGE 502 Isolate Nodule
101 2643221659 Ensifer sp. Root127 Isolate Unclassified
102 2643221698 Ensifer sp. Root142 Isolate Unclassified
103 2891373044 Shinella sp. AETb1-6 Isolate Rhizosphere
104 2996887358 Rhizobium sp. R711 Isolate Nodule
105 8005321885 Rhizobium sp. R72 Isolate Nodule
106 8005542996 Rhizobium grahamii CCGM3 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 94.81
Metatranscriptomes 0
Isolates 5.19

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 21.48
Nodule 2.22
Rhizoplane 0.74
Rhizosphere 63.7
Stem 0
Stem Tuber 0
Unclassified 2.22

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496125_0002172 3300048928 Bacteria 26207
2 JGI25152J39213_1004693 3300002773 Bacteria 4227
3 JGI25406J46586_10000091 3300003203 Bacteria 41506
4 JGI25406J46586_10000654 3300003203 Bacteria 16185
5 JGI25153J46596_10000668 3300003215 Bacteria 21012
6 rootH1_10105047 3300003316 Bacteria 2254
7 rootH2_10007167 3300003320 Bacteria 5777
8 rootL2_10165459 3300003322 Bacteria 2061
9 JGI25161J50226_1000045 3300003374 Bacteria 116781
10 Ga0055526_1000056 3300003771 Bacteria 110574
11 Ga0055526_1006117 3300003771 Bacteria 6639
12 Ga0055524_1000995 3300003775 Bacteria 17700
13 Ga0055528_1002990 3300003790 Bacteria 8754
14 Ga0055543_1000076 3300004625 Bacteria 86664
15 Ga0065165_1002429 3300005262 Bacteria 15823
16 Ga0065165_1004780 3300005262 Bacteria 8090
17 Ga0065712_10071837 3300005290 Bacteria 5034
18 Ga0070683_100004584 3300005329 Bacteria 11407
19 Ga0070675_100000012 3300005354 Bacteria 217352
20 Ga0070678_100031087 3300005456 Bacteria 3678
21 Ga0070684_100066047 3300005535 Bacteria 3176
22 Ga0070665_100145541 3300005548 Bacteria 2373
23 Ga0068856_100002194 3300005614 Bacteria 20272
24 Ga0068859_100049281 3300005617 Bacteria 4230
25 Ga0068864_100002713 3300005618 Bacteria 14580
26 Ga0068861_100042835 3300005719 Bacteria 3395
27 Ga0068861_100046066 3300005719 Bacteria 3287
28 Ga0081455_10009048 3300005937 Bacteria 10281
29 Ga0081540_1007621 3300005983 Bacteria 7683
30 Ga0081539_10000716 3300005985 Bacteria 66592
31 Ga0081539_10004492 3300005985 Bacteria 15352
32 Ga0070712_100078081 3300006175 Unclassified 2389
33 Ga0075428_100099051 3300006844 Bacteria 3178
34 Ga0075430_100014171 3300006846 Bacteria 6796
35 Ga0075431_100002973 3300006847 Bacteria 16402
36 Ga0075431_100003097 3300006847 Bacteria 16105
37 Ga0075431_100030657 3300006847 Bacteria 5540
38 Ga0075433_10012708 3300006852 Bacteria 6814
39 Ga0075429_100027649 3300006880 Bacteria 4924
40 Ga0097620_100049281 3300006931 Bacteria 4230
41 Ga0105240_10038649 3300009093 Bacteria 6120
42 Ga0105247_10002618 3300009101 Bacteria 12150
43 Ga0114129_10005675 3300009147 Bacteria 17666
44 Ga0114129_10086449 3300009147 Bacteria 4349
45 Ga0114129_10149114 3300009147 Bacteria 3201
46 Ga0105242_10010466 3300009176 Bacteria 7118
47 Ga0105248_10002008 3300009177 Bacteria 22602
48 Ga0105248_10059566 3300009177 Bacteria 4289
49 Ga0105248_10130439 3300009177 Bacteria 2836
50 Ga0105237_10010239 3300009545 Bacteria 9990
51 Ga0157374_10110639 3300013296 Bacteria 2642
52 Ga0163163_10007657 3300014325 Bacteria 9542
53 Ga0163163_10030393 3300014325 Bacteria 5205
54 Ga0213876_10024904 3300021384 Bacteria 3160
55 Ga0209436_100001 3300025208 Bacteria 304543
56 Ga0209436_100003 3300025208 Bacteria 220530
57 Ga0207425_1003586 3300025245 Bacteria 4919
58 Ga0209129_1000491 3300025258 Bacteria 28765
59 Ga0209673_1000397 3300025273 Bacteria 77638
60 Ga0209673_1000489 3300025273 Bacteria 65739
61 Ga0209673_1000506 3300025273 Bacteria 64206
62 Ga0209130_1000049 3300025284 Bacteria 226841
63 Ga0209025_1000044 3300025294 Bacteria 349480
64 Ga0209025_1000962 3300025294 Bacteria 43394
65 Ga0209564_1000255 3300025295 Bacteria 113017
66 Ga0209564_1000396 3300025295 Bacteria 77945
67 Ga0209758_1000175 3300025297 Bacteria 145649
68 Ga0209256_1000217 3300025299 Bacteria 106382
69 Ga0209256_1000379 3300025299 Bacteria 71301
70 Ga0207426_1000043 3300025302 Bacteria 432827
71 Ga0209051_1001276 3300025303 Bacteria 22397
72 Ga0209257_1013517 3300025304 Bacteria 3619
73 Ga0207697_10000996 3300025315 Bacteria 15849
74 Ga0207710_10004970 3300025900 Bacteria 5760
75 Ga0207705_10009721 3300025909 Bacteria 6995
76 Ga0207693_10090653 3300025915 Unclassified 2396
77 Ga0207657_10000691 3300025919 Bacteria 35886
78 Ga0207659_10000003 3300025926 Bacteria 523949
79 Ga0207669_10037195 3300025937 Bacteria 2790
80 Ga0207661_10004423 3300025944 Bacteria 9859
81 Ga0207702_10003771 3300026078 Bacteria 13688
82 Ga0207676_10009616 3300026095 Bacteria 6881
83 Ga0207675_100031153 3300026118 Bacteria 4966
84 Ga0207675_100068193 3300026118 Bacteria 3325
85 Ga0207683_10037562 3300026121 Bacteria 4218
86 Ga0207698_10098250 3300026142 Bacteria 2419
87 Ga0265337_1000783 3300028556 Bacteria 16734
88 Ga0265334_10003420 3300028573 Bacteria 7223
89 Ga0265338_10016263 3300028800 Bacteria 8106
90 Ga0307407_10047937 3300031903 Bacteria 2428
91 Ga0307412_10004954 3300031911 Bacteria 7440
92 Ga0373931_0033866 3300035691 Bacteria 2649
93 Ga0395905_0004651 3300037471 Bacteria 14191
94 Ga0436365_1852545 3300039437 Bacteria 3161
95 Ga0436363_0392198 3300039450 Bacteria 3930
96 Ga0439465_0000885 3300041413 Bacteria 9469
97 Ga0495674_0015372 3300047319 Bacteria 7157
98 Ga0495675_0020779 3300047444 Bacteria 4178
99 Ga0495684_0048136 3300047471 Bacteria 3260
100 Ga0496108_0005029 3300048911 Bacteria 10681
101 Ga0496117_0000434 3300048920 Bacteria 69571
102 Ga0496122_0001470 3300048925 Bacteria 37937
103 Ga0496123_0000018 3300048926 Bacteria 404553
104 Ga0496124_0000790 3300048927 Bacteria 51766
105 Ga0496124_0039908 3300048927 Bacteria 4064
106 Ga0496126_0001151 3300048929 Bacteria 43805
107 Ga0501034_0035219 3300049571 Bacteria 5076
108 Ga0501036_0030615 3300049572 Bacteria 4545
109 Ga0501038_0010568 3300049574 Bacteria 8441
110 Ga0501038_0080938 3300049574 Unclassified 2737
111 Ga0501043_0078873 3300049579 Bacteria 2588
112 Ga0501070_0008289 3300049586 Bacteria 8784
113 Ga0501044_0000165 3300049823 Bacteria 82268
114 Ga0501044_0000663 3300049823 Bacteria 41517
115 Ga0501044_0020533 3300049823 Bacteria 7053
116 Ga0501044_0022474 3300049823 Bacteria 6719
117 Ga0501044_0031476 3300049823 Bacteria 5584
118 nmdc:mga05p37_166889_c1 3300050507 Bacteria 2686
119 nmdc:mga05p37_199397_c1 3300050507 Bacteria 2425
120 nmdc:mga05p37_28781_c1 3300050507 Bacteria 6778
121 nmdc:mga05p37_3401_c1 3300050507 Bacteria 18568
122 nmdc:mga09592_10145_c1 3300050508 Bacteria 7665
123 nmdc:mga0qj67_5370_c1 3300050509 Bacteria 9354
124 nmdc:mga06r32_2335_c1 3300050510 Bacteria 17004
125 nmdc:mga06r32_5932_c1 3300050510 Bacteria 10991
126 nmdc:mga0n895_33349_c1 3300050512 Bacteria 4949
127 nmdc:mga0a205_9754_c1 3300050515 Bacteria 8795
128 Ga0500559_0024192 3300053136 Bacteria 2582
129 2535518588 2534681796 Bacteria 7146037
130 2644336683 2643221659 Bacteria 7890716
131 2644544848 2643221698 Bacteria 7756764
132 2891376670 2891373044 Bacteria 5202277
133 2996889664 2996887358 Bacteria 5795980
134 8005324191 8005321885 Bacteria 5795980
135 8005549485 8005542996 Bacteria 7077758
136 Ga0496125_0002172
137 JGI25152J39213_1004693
138 JGI25406J46586_10000091
139 JGI25406J46586_10000654
140 JGI25153J46596_10000668
141 rootH1_10105047
142 rootH2_10007167
143 rootL2_10165459
144 JGI25161J50226_1000045
145 Ga0055526_1000056
146 Ga0055526_1006117
147 Ga0055524_1000995
148 Ga0055528_1002990
149 Ga0055543_1000076
150 Ga0065165_1002429
151 Ga0065165_1004780
152 Ga0065712_10071837
153 Ga0070683_100004584
154 Ga0070675_100000012
155 Ga0070678_100031087
156 Ga0070684_100066047
157 Ga0070665_100145541
158 Ga0068856_100002194
159 Ga0068859_100049281
160 Ga0068864_100002713
161 Ga0068861_100042835
162 Ga0068861_100046066
163 Ga0081455_10009048
164 Ga0081540_1007621
165 Ga0081539_10000716
166 Ga0081539_10004492
167 Ga0070712_100078081
168 Ga0075428_100099051
169 Ga0075430_100014171
170 Ga0075431_100002973
171 Ga0075431_100003097
172 Ga0075431_100030657
173 Ga0075433_10012708
174 Ga0075429_100027649
175 Ga0097620_100049281
176 Ga0105240_10038649
177 Ga0105247_10002618
178 Ga0114129_10005675
179 Ga0114129_10086449
180 Ga0114129_10149114
181 Ga0105242_10010466
182 Ga0105248_10002008
183 Ga0105248_10059566
184 Ga0105248_10130439
185 Ga0105237_10010239
186 Ga0157374_10110639
187 Ga0163163_10007657
188 Ga0163163_10030393
189 Ga0213876_10024904
190 Ga0209436_100001
191 Ga0209436_100003
192 Ga0207425_1003586
193 Ga0209129_1000491
194 Ga0209673_1000397
195 Ga0209673_1000489
196 Ga0209673_1000506
197 Ga0209130_1000049
198 Ga0209025_1000044
199 Ga0209025_1000962
200 Ga0209564_1000255
201 Ga0209564_1000396
202 Ga0209758_1000175
203 Ga0209256_1000217
204 Ga0209256_1000379
205 Ga0207426_1000043
206 Ga0209051_1001276
207 Ga0209257_1013517
208 Ga0207697_10000996
209 Ga0207710_10004970
210 Ga0207705_10009721
211 Ga0207693_10090653
212 Ga0207657_10000691
213 Ga0207659_10000003
214 Ga0207669_10037195
215 Ga0207661_10004423
216 Ga0207702_10003771
217 Ga0207676_10009616
218 Ga0207675_100031153
219 Ga0207675_100068193
220 Ga0207683_10037562
221 Ga0207698_10098250
222 Ga0265337_1000783
223 Ga0265334_10003420
224 Ga0265338_10016263
225 Ga0307407_10047937
226 Ga0307412_10004954
227 Ga0373931_0033866
228 Ga0395905_0004651
229 Ga0436365_1852545
230 Ga0436363_0392198
231 Ga0439465_0000885
232 Ga0495674_0015372
233 Ga0495675_0020779
234 Ga0495684_0048136
235 Ga0496108_0005029
236 Ga0496117_0000434
237 Ga0496122_0001470
238 Ga0496123_0000018
239 Ga0496124_0000790
240 Ga0496124_0039908
241 Ga0496126_0001151
242 Ga0501034_0035219
243 Ga0501036_0030615
244 Ga0501038_0010568
245 Ga0501038_0080938
246 Ga0501043_0078873
247 Ga0501070_0008289
248 Ga0501044_0000165
249 Ga0501044_0000663
250 Ga0501044_0020533
251 Ga0501044_0022474
252 Ga0501044_0031476
253 nmdc:mga05p37_166889_c1
254 nmdc:mga05p37_199397_c1
255 nmdc:mga05p37_28781_c1
256 nmdc:mga05p37_3401_c1
257 nmdc:mga09592_10145_c1
258 nmdc:mga0qj67_5370_c1
259 nmdc:mga06r32_2335_c1
260 nmdc:mga06r32_5932_c1
261 nmdc:mga0n895_33349_c1
262 nmdc:mga0a205_9754_c1
263 Ga0500559_0024192
264 2535518588
265 2644336683
266 2644544848
267 2891376670
268 2996889664
269 8005324191
270 8005549485

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00128

Alpha-amylase

Alpha amylase, catalytic domain

160

262

0.87

PF11941

DUF3459

Domain of unknown function (DUF3459)

539

647

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
3vge-assembly1.cif.gz_A crystal structure of glycosyltrehalose trehalohydrolase (d252s) 0.9361 1 576
2bhz-assembly1.cif.gz_A crystal structure of deinococcus radiodurans maltooligosyltrehalose trehalohydrolase in complex with maltose 0.9355 1 575
1eh9-assembly1.cif.gz_A-2 crystal structure of sulfolobus solfataricus glycosyltrehalose trehalohydrolase 0.9319 1 576
1eha-assembly1.cif.gz_A crystal structure of glycosyltrehalose trehalohydrolase from sulfolobus solfataricus 0.9315 1 576
2by3-assembly1.cif.gz_A is radiation damage dependent on the dose-rate used during macromolecular crystallography data collection 0.9285 1 575
ID Description Score Start End Superfamily
3vghA02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.9604 67 473 3.20.20.80
3vghA02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.9371 67 473 3.20.20.80
2by0A02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.9341 64 479 3.20.20.80
3m07A02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.9226 63 479 3.20.20.80
2by0A02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.9193 64 479 3.20.20.80
ID Description Score Start End GO Terms
AF-A0A060BVC6-F1-model_v4 Alpha-amylase 0.9885 35 202 GO:0005737
GO:0005975
GO:0016787
AF-A0A521X0P7-F1-model_v4 Malto-oligosyltrehalose trehalohydrolase 0.9817 2 396 GO:0005737
GO:0005975
GO:0016787
AF-A0A150RPC6-F1-model_v4 Malto-oligosyltrehalose trehalohydrolase (EC 3.2.1.141) 0.9715 2 457 GO:0005737
GO:0005992
GO:0033942
AF-A0A838SMP5-F1-model_v4 Malto-oligosyltrehalose trehalohydrolase 0.9695 11 228 GO:0005737
GO:0005975
GO:0016787
AF-A0A2V5LRA2-F1-model_v4 Malto-oligosyltrehalose trehalohydrolase 0.9689 2 216 GO:0004553
GO:0005737
GO:0005975

Map