F160170

General Info

Members Datasets Scaffolds Average Seq Length
134 90 132 302

Family's Representative Sequence

Representative Sequence 3300028563|Ga0265319_1005736|Ga0265319_10057362
Length 334
Sequence MGCRLPLAPARRKVGVDLNPEFWRGGFFAFNSMRPMNWTPLELTVRVGCNLTYETPVQTPVLFVLKPRPEGRVLVMQERLLFGGALPSSEFQDSHGNITYRATFMPGRNEIRHDALVAVSSLPDSRNLGGEIVPVGQLPFELLRYTLPSRYCDSDKLMNFAWNQFGHTTHGLPRVQAICDWVHHNIEYRHMSGRPDLSASEVIARRYGVCRDFAHAVIALCRAFNLPARYVTGHLPDIGCFDPGSAMDFHAYCEVYLGQEWLTFDARYNVQRIGRVKVAHGADAVDGAFATIYGEAYLTYFQVWAYQVNPQQVAVGDPIDLSKRLDGSPLVRFH

Samples

Sample ID Description Type Environment
1 2786546517 Verrucomicrobia bacterium LW23 Isolate Rhizoplane
2 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
3 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
4 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
5 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
6 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
7 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
8 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
9 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
10 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
11 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
12 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
13 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
14 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
15 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
16 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
17 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
18 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
19 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
20 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
21 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
22 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
23 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
24 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
25 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
26 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
27 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
28 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
29 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
30 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
47 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
48 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
49 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
50 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
51 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
52 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
53 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
54 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
55 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
56 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
57 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
58 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
59 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
60 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
61 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
62 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
63 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
64 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
65 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
66 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
67 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
68 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
69 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
70 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
71 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
72 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
73 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
74 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
75 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
76 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
77 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
78 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
79 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
80 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
81 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
82 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
83 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
84 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
85 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
86 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
87 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
88 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
89 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
90 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.25
Metatranscriptomes 0
Isolates 0.75

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.24
Nodule 0
Rhizoplane 1.49
Rhizosphere 95.52
Stem 0
Stem Tuber 0
Unclassified 0.75

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070670_100066282 3300005331 Bacteria 3098
2 Ga0070689_100001075 3300005340 Bacteria 17128
3 Ga0070687_100041613 3300005343 Bacteria 2323
4 Ga0070675_100083854 3300005354 Unclassified 2661
5 Ga0070713_100548313 3300005436 Unclassified 1095
6 Ga0070708_100287586 3300005445 Bacteria 1547
7 Ga0070663_100000719 3300005455 Bacteria 17832
8 Ga0070665_100488591 3300005548 Unclassified 1242
9 Ga0068855_100129401 3300005563 Unclassified 2884
10 Ga0068854_100347949 3300005578 Unclassified 1212
11 Ga0068856_100002610 3300005614 Bacteria 18537
12 Ga0068856_100286275 3300005614 Bacteria 1665
13 Ga0068852_100052043 3300005616 Unclassified 3518
14 Ga0068859_100081298 3300005617 Bacteria 3282
15 Ga0068863_100511879 3300005841 Unclassified 1183
16 Ga0068858_100011622 3300005842 Bacteria 8304
17 Ga0068860_100000107 3300005843 Bacteria 133502
18 Ga0068860_100203922 3300005843 Unclassified 1917
19 Ga0070712_100114400 3300006175 Bacteria 2020
20 Ga0068871_100147704 3300006358 Bacteria 2003
21 Ga0075430_100494141 3300006846 Bacteria 1010
22 Ga0097620_100081295 3300006931 Bacteria 3282
23 Ga0105240_10065583 3300009093 Bacteria 4507
24 Ga0105240_10188030 3300009093 Bacteria 2431
25 Ga0105240_10411543 3300009093 Unclassified 1521
26 Ga0111539_10078125 3300009094 Bacteria 3894
27 Ga0111539_10310473 3300009094 Bacteria 1835
28 Ga0105245_10176076 3300009098 Bacteria 2040
29 Ga0105238_10060550 3300009551 Bacteria 3790
30 Ga0157374_10026043 3300013296 Bacteria 5258
31 Ga0157374_10096916 3300013296 Bacteria 2821
32 Ga0157372_10168398 3300013307 Bacteria 2534
33 Ga0163163_10034736 3300014325 Bacteria 4886
34 Ga0163163_10092065 3300014325 Bacteria 3047
35 Ga0157380_10087268 3300014326 Bacteria 2565
36 Ga0207695_10000141 3300025913 Bacteria 215831
37 Ga0207693_10220885 3300025915 Bacteria 1489
38 Ga0207657_10145729 3300025919 Bacteria 1932
39 Ga0207694_10053320 3300025924 Bacteria 3136
40 Ga0207694_10382867 3300025924 Bacteria 1168
41 Ga0207687_10110276 3300025927 Bacteria 2040
42 Ga0207700_10403384 3300025928 Bacteria 1198
43 Ga0207706_10292917 3300025933 Bacteria 1419
44 Ga0207670_10012429 3300025936 Bacteria 4983
45 Ga0207670_10330439 3300025936 Archaea 1202
46 Ga0207667_10085871 3300025949 Unclassified 3257
47 Ga0207703_10002739 3300026035 Bacteria 15092
48 Ga0207703_10029623 3300026035 Bacteria 4320
49 Ga0207678_10025180 3300026067 Bacteria 5195
50 Ga0207708_10017279 3300026075 Bacteria 5430
51 Ga0207702_10003616 3300026078 Bacteria 14045
52 Ga0207702_10527916 3300026078 Unclassified 1153
53 Ga0207641_10092254 3300026088 Bacteria 2652
54 Ga0207641_10331447 3300026088 Unclassified 1446
55 Ga0268266_10000031 3300028379 Bacteria 406292
56 Ga0268264_10000501 3300028381 Bacteria 50746
57 Ga0268264_10328510 3300028381 Unclassified 1448
58 Ga0265337_1001277 3300028556 Bacteria 12644
59 Ga0265337_1004676 3300028556 Bacteria 5627
60 Ga0265337_1032693 3300028556 Bacteria 1538
61 Ga0265337_1036520 3300028556 Bacteria 1433
62 Ga0265319_1002545 3300028563 Bacteria 9871
63 Ga0265319_1005736 3300028563 Bacteria 5882
64 Ga0265334_10027852 3300028573 Unclassified 2274
65 Ga0265318_10015360 3300028577 Bacteria 3188
66 Ga0265318_10022255 3300028577 Bacteria 2537
67 Ga0265336_10001352 3300028666 Bacteria 11363
68 Ga0265338_10000853 3300028800 Bacteria 51517
69 Ga0265338_10003759 3300028800 Bacteria 21088
70 Ga0265338_10005316 3300028800 Bacteria 16860
71 Ga0265338_10006069 3300028800 Bacteria 15518
72 Ga0265338_10009384 3300028800 Bacteria 11682
73 Ga0265338_10021968 3300028800 Bacteria 6630
74 Ga0265338_10038262 3300028800 Bacteria 4549
75 Ga0265338_10039487 3300028800 Unclassified 4450
76 Ga0265338_10049448 3300028800 Unclassified 3811
77 Ga0265338_10078967 3300028800 Unclassified 2772
78 Ga0265338_10118506 3300028800 Unclassified 2115
79 Ga0265338_10127221 3300028800 Unclassified 2019
80 Ga0265338_10137354 3300028800 Unclassified 1920
81 Ga0265324_10000618 3300029957 Bacteria 24210
82 Ga0265324_10007683 3300029957 Unclassified 4341
83 Ga0265324_10020252 3300029957 Bacteria 2391
84 Ga0265324_10070539 3300029957 Unclassified 1190
85 Ga0307512_10114842 3300030522 Bacteria 1756
86 Ga0265320_10000012 3300031240 Bacteria 244592
87 Ga0265320_10010515 3300031240 Bacteria 5508
88 Ga0265320_10011483 3300031240 Bacteria 5210
89 Ga0265320_10019468 3300031240 Unclassified 3709
90 Ga0265320_10043594 3300031240 Unclassified 2217
91 Ga0265320_10047202 3300031240 Bacteria 2107
92 Ga0265325_10105470 3300031241 Unclassified 1375
93 Ga0265340_10035395 3300031247 Unclassified 2480
94 Ga0265327_10000574 3300031251 Bacteria 62215
95 Ga0265327_10001061 3300031251 Bacteria 38364
96 Ga0265327_10002612 3300031251 Bacteria 18625
97 Ga0265316_10058287 3300031344 Unclassified 3009
98 Ga0265316_10245006 3300031344 Unclassified 1317
99 Ga0307408_100000003 3300031548 Bacteria 618438
100 Ga0265314_10000304 3300031711 Bacteria 70430
101 Ga0265314_10052997 3300031711 Unclassified 2816
102 Ga0307410_10000002 3300031852 Bacteria 145309
103 Ga0307409_100000025 3300031995 Bacteria 51516
104 Ga0307411_10287437 3300032005 Unclassified 1312
105 Ga0373928_0000252 3300035084 Bacteria 10587
106 Ga0373944_0000406 3300035089 Bacteria 9803
107 Ga0373949_0002093 3300035090 Bacteria 5259
108 Ga0373932_0000002 3300035112 Bacteria 711821
109 Ga0373946_0052661 3300035171 Bacteria 1708
110 Ga0373942_0030035 3300035207 Bacteria 1430
111 Ga0373962_0000017 3300035242 Bacteria 47185
112 Ga0373931_0000025 3300035691 Bacteria 129499
113 Ga0373927_0033326 3300035695 Bacteria 3354
114 Ga0373947_0172807 3300035725 Bacteria 1403
115 Ga0373937_0105242 3300036401 Unclassified 2622
116 Ga0373925_0000059 3300037068 Bacteria 120259
117 Ga0395899_0000009 3300037312 Bacteria 538632
118 Ga0395898_0000050 3300037466 Bacteria 283059
119 Ga0451576_0054005 3300045051 Bacteria 4207
120 Ga0495630_0171312 3300046517 Bacteria 1654
121 Ga0495645_0018154 3300046543 Bacteria 5050
122 Ga0495645_0076622 3300046543 Unclassified 2406
123 Ga0495613_0231588 3300046689 Unclassified 1294
124 Ga0495660_0196020 3300046810 Bacteria 967
125 Ga0495604_0211542 3300047317 Unclassified 1340
126 Ga0495602_0377777 3300048088 Unclassified 1016
127 Ga0496115_0000768 3300048918 Bacteria 23650
128 Ga0501257_015154 3300049686 Unclassified 1779
129 Ga0495601_0018078 3300053077 Unclassified 4286
130 Ga0500643_011445 3300053087 Unclassified 3238
131 Ga0500556_0006901 3300053104 Bacteria 3233
132 Ga0500616_0005903 3300053153 Bacteria 8188

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025933 Ga0207706_10292917 Ga0207706_102929173 271
2 3300046810 Ga0495660_0196020 Ga0495660_0196020_53_871 271
3 3300049686 Ga0501257_015154 Ga0501257_015154_849_1712 271
4 3300013296 Ga0157374_10026043 Ga0157374_100260433 274
5 3300028800 Ga0265338_10006069 Ga0265338_100060694 278
6 3300037312 Ga0395899_0000009 Ga0395899_0000009_143945_144814 288
7 3300005455 Ga0070663_100000719 Ga0070663_1000007195 297
8 3300005548 Ga0070665_100488591 Ga0070665_1004885911 297
9 3300014325 Ga0163163_10034736 Ga0163163_100347363 297
10 3300026067 Ga0207678_10025180 Ga0207678_100251802 297
11 3300026075 Ga0207708_10017279 Ga0207708_100172794 297
12 3300005354 Ga0070675_100083854 Ga0070675_1000838542 298
13 3300009093 Ga0105240_10065583 Ga0105240_100655833 298
14 3300026035 Ga0207703_10002739 Ga0207703_100027399 298
15 3300026088 Ga0207641_10092254 Ga0207641_100922542 298
16 3300028379 Ga0268266_10000031 Ga0268266_10000031331 298
17 3300046543 Ga0495645_0076622 Ga0495645_0076622_197_1093 298
18 3300046689 Ga0495613_0231588 Ga0495613_0231588_165_1061 298
19 3300047317 Ga0495604_0211542 Ga0495604_0211542_420_1316 298
20 3300053077 Ga0495601_0018078 Ga0495601_0018078_402_1298 298
21 3300053087 Ga0500643_011445 Ga0500643_011445_572_1495 298
22 3300005331 Ga0070670_100066282 Ga0070670_1000662823 299
23 3300005340 Ga0070689_100001075 Ga0070689_10000107514 299
24 3300005340 Ga0070689_100001075 Ga0070689_1000010759 299
25 3300005343 Ga0070687_100041613 Ga0070687_1000416131 299
26 3300005436 Ga0070713_100548313 Ga0070713_1005483131 299
27 3300005445 Ga0070708_100287586 Ga0070708_1002875861 299
28 3300005563 Ga0068855_100129401 Ga0068855_1001294012 299
29 3300005578 Ga0068854_100347949 Ga0068854_1003479492 299
30 3300005614 Ga0068856_100002610 Ga0068856_1000026106 299
31 3300005614 Ga0068856_100286275 Ga0068856_1002862752 299
32 3300005616 Ga0068852_100052043 Ga0068852_1000520433 299
33 3300005617 Ga0068859_100081298 Ga0068859_1000812983 299
34 3300005841 Ga0068863_100511879 Ga0068863_1005118791 299
35 3300005842 Ga0068858_100011622 Ga0068858_1000116224 299
36 3300005843 Ga0068860_100000107 Ga0068860_10000010769 299
37 3300005843 Ga0068860_100203922 Ga0068860_1002039222 299
38 3300006175 Ga0070712_100114400 Ga0070712_1001144001 299
39 3300006358 Ga0068871_100147704 Ga0068871_1001477042 299
40 3300006846 Ga0075430_100494141 Ga0075430_1004941411 299
41 3300006931 Ga0097620_100081295 Ga0097620_1000812953 299
42 3300009093 Ga0105240_10188030 Ga0105240_101880302 299
43 3300009093 Ga0105240_10411543 Ga0105240_104115431 299
44 3300009094 Ga0111539_10078125 Ga0111539_100781253 299
45 3300009094 Ga0111539_10310473 Ga0111539_103104732 299
46 3300009098 Ga0105245_10176076 Ga0105245_101760762 299
47 3300009551 Ga0105238_10060550 Ga0105238_100605502 299
48 3300013296 Ga0157374_10096916 Ga0157374_100969165 299
49 3300013307 Ga0157372_10168398 Ga0157372_101683982 299
50 3300014325 Ga0163163_10092065 Ga0163163_100920652 299
51 3300014326 Ga0157380_10087268 Ga0157380_100872682 299
52 3300025913 Ga0207695_10000141 Ga0207695_10000141106 299
53 3300025915 Ga0207693_10220885 Ga0207693_102208852 299
54 3300025919 Ga0207657_10145729 Ga0207657_101457292 299
55 3300025924 Ga0207694_10053320 Ga0207694_100533202 299
56 3300025924 Ga0207694_10382867 Ga0207694_103828672 299
57 3300025927 Ga0207687_10110276 Ga0207687_101102761 299
58 3300025928 Ga0207700_10403384 Ga0207700_104033841 299
59 3300025936 Ga0207670_10012429 Ga0207670_100124296 299
60 3300025936 Ga0207670_10330439 Ga0207670_103304392 299
61 3300025949 Ga0207667_10085871 Ga0207667_100858711 299
62 3300026035 Ga0207703_10029623 Ga0207703_100296232 299
63 3300026078 Ga0207702_10003616 Ga0207702_100036163 299
64 3300026078 Ga0207702_10527916 Ga0207702_105279161 299
65 3300026088 Ga0207641_10331447 Ga0207641_103314471 299
66 3300028381 Ga0268264_10000501 Ga0268264_1000050120 299
67 3300028381 Ga0268264_10328510 Ga0268264_103285102 299
68 3300028556 Ga0265337_1001277 Ga0265337_10012772 299
69 3300028556 Ga0265337_1004676 Ga0265337_10046762 299
70 3300028556 Ga0265337_1032693 Ga0265337_10326932 299
71 3300028556 Ga0265337_1036520 Ga0265337_10365203 299
72 3300028563 Ga0265319_1002545 Ga0265319_10025454 299
73 3300028563 Ga0265319_1005736 Ga0265319_10057362 299
74 3300028573 Ga0265334_10027852 Ga0265334_100278523 299
75 3300028577 Ga0265318_10015360 Ga0265318_100153602 299
76 3300028577 Ga0265318_10022255 Ga0265318_100222552 299
77 3300028666 Ga0265336_10001352 Ga0265336_100013527 299
78 3300028800 Ga0265338_10000853 Ga0265338_1000085316 299
79 3300028800 Ga0265338_10003759 Ga0265338_1000375929 299
80 3300028800 Ga0265338_10005316 Ga0265338_1000531619 299
81 3300028800 Ga0265338_10009384 Ga0265338_100093841 299
82 3300028800 Ga0265338_10021968 Ga0265338_100219684 299
83 3300028800 Ga0265338_10038262 Ga0265338_100382625 299
84 3300028800 Ga0265338_10039487 Ga0265338_100394876 299
85 3300028800 Ga0265338_10049448 Ga0265338_100494486 299
86 3300028800 Ga0265338_10078967 Ga0265338_100789675 299
87 3300028800 Ga0265338_10118506 Ga0265338_101185062 299
88 3300028800 Ga0265338_10127221 Ga0265338_101272212 299
89 3300028800 Ga0265338_10137354 Ga0265338_101373542 299
90 3300029957 Ga0265324_10000618 Ga0265324_1000061822 299
91 3300029957 Ga0265324_10007683 Ga0265324_100076831 299
92 3300029957 Ga0265324_10020252 Ga0265324_100202522 299
93 3300029957 Ga0265324_10070539 Ga0265324_100705392 299
94 3300030522 Ga0307512_10114842 Ga0307512_101148422 299
95 3300031240 Ga0265320_10000012 Ga0265320_1000001242 299
96 3300031240 Ga0265320_10010515 Ga0265320_100105153 299
97 3300031240 Ga0265320_10011483 Ga0265320_100114833 299
98 3300031240 Ga0265320_10019468 Ga0265320_100194686 299
99 3300031240 Ga0265320_10043594 Ga0265320_100435942 299
100 3300031240 Ga0265320_10047202 Ga0265320_100472021 299
101 3300031241 Ga0265325_10105470 Ga0265325_101054702 299
102 3300031247 Ga0265340_10035395 Ga0265340_100353952 299
103 3300031251 Ga0265327_10000574 Ga0265327_1000057421 299
104 3300031251 Ga0265327_10001061 Ga0265327_1000106140 299
105 3300031251 Ga0265327_10002612 Ga0265327_100026124 299
106 3300031344 Ga0265316_10058287 Ga0265316_100582872 299
107 3300031344 Ga0265316_10245006 Ga0265316_102450062 299
108 3300031548 Ga0307408_100000003 Ga0307408_100000003163 299
109 3300031711 Ga0265314_10000304 Ga0265314_1000030416 299
110 3300031711 Ga0265314_10052997 Ga0265314_100529974 299
111 3300031852 Ga0307410_10000002 Ga0307410_10000002128 299
112 3300031995 Ga0307409_100000025 Ga0307409_10000002545 299
113 3300032005 Ga0307411_10287437 Ga0307411_102874371 299
114 3300035084 Ga0373928_0000252 Ga0373928_0000252_6739_7638 299
115 3300035089 Ga0373944_0000406 Ga0373944_0000406_1303_2202 299
116 3300035090 Ga0373949_0002093 Ga0373949_0002093_971_1870 299
117 3300035112 Ga0373932_0000002 Ga0373932_0000002_516998_517897 299
118 3300035171 Ga0373946_0052661 Ga0373946_0052661_391_1290 299
119 3300035207 Ga0373942_0030035 Ga0373942_0030035_10_909 299
120 3300035242 Ga0373962_0000017 Ga0373962_0000017_4009_4908 299
121 3300035691 Ga0373931_0000025 Ga0373931_0000025_115604_116503 299
122 3300035695 Ga0373927_0033326 Ga0373927_0033326_2333_3232 299
123 3300035725 Ga0373947_0172807 Ga0373947_0172807_345_1244 299
124 3300036401 Ga0373937_0105242 Ga0373937_0105242_1652_2563 299
125 3300037068 Ga0373925_0000059 Ga0373925_0000059_42456_43355 299
126 3300037466 Ga0395898_0000050 Ga0395898_0000050_153471_154463 299
127 3300045051 Ga0451576_0054005 Ga0451576_0054005_1864_2763 299
128 3300046517 Ga0495630_0171312 Ga0495630_0171312_439_1338 299
129 3300046543 Ga0495645_0018154 Ga0495645_0018154_105_1004 299
130 3300048088 Ga0495602_0377777 Ga0495602_0377777_13_912 299
131 3300048918 Ga0496115_0000768 Ga0496115_0000768_20807_21706 299
132 3300053104 Ga0500556_0006901 Ga0500556_0006901_1463_2404 299
133 3300053153 Ga0500616_0005903 Ga0500616_0005903_3710_4615 299
134 iso_pu_bacteria 2786546517 2787437533 299

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01841

Transglut_core

Transglutaminase-like superfamily

159

266

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
3isr-assembly1.cif.gz_B the crystal structure of a putative cysteine protease from cytophaga hutchinsonii to 1.9a 0.8861 3 274
3isr-assembly1.cif.gz_B the crystal structure of a putative cysteine protease from cytophaga hutchinsonii to 1.9a 0.8226 3 274
8glv-assembly1.cif.gz_Eb 96-nm repeat unit of doublet microtubules from chlamydomonas reinhardtii flagella 0.7548 140 236
8j07-assembly1.cif.gz_7 96nm repeat of human respiratory doublet microtubule and associated axonemal complexes 0.623 108 246
4bgf-assembly3.cif.gz_C the 3d-structure of arylamine-n-acetyltransferase from m. tuberculosis 0.6217 123 234
ID Description Score Start End Superfamily
3isrC01 Alpha Beta;Roll;C8orf32 fold; 0.8187 89 260 3.10.620.30
af_P9WL93_122_301_3.10.620.30 Alpha Beta;Roll;C8orf32 fold; 0.8087 105 251 3.10.620.30
3isrD02 Mainly Beta;Sandwich;Immunoglobulin-like; 0.8076 10 83 2.60.40.2250
af_Q50732_135_318_3.10.620.30 Alpha Beta;Roll;C8orf32 fold; 0.7933 102 253 3.10.620.30
af_I6XWA9_2_176_3.10.620.30 Alpha Beta;Roll;C8orf32 fold; 0.7736 99 231 3.10.620.30
ID Description Score Start End GO Terms
AF-A0A1D8AVG8-F1-model_v4 Transglutaminase-like superfamily protein 0.9727 4 298
AF-A0A435VNV1-F1-model_v4 deleted 0.9639 97 267
AF-A0A536DGI9-F1-model_v4 Transglutaminase family protein 0.9624 116 269
AF-A0A536RG63-F1-model_v4 Transglutaminase family protein 0.9622 8 270
AF-A0A536R3C2-F1-model_v4 Transglutaminase family protein 0.9602 8 274

Feature Viewer

pLDDT pTM Quality
91.31 0.89 High
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Predicted Structure (AlphaFold2)

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