F158233

General Info

Members Datasets Scaffolds Average Seq Length
133 95 132 363

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|8015556637|8015556748
Length 421
Sequence IKVPAVGESITEATIGSWTKKSGEFVKRNEVLLLLETDKASVEVVAENDGVLTILPGSENGAVVKIGATIATLDTDAKASAAASASAKATDGQASPTPTQASTQAAPQAGGASTHQSPAVQRIVGEKGLDTTGMQGTGKDGRLTKGDVLDASSSAKATAGQAAAPSSKPAAVPTVNAAEVMAARGPSKQGEKKVVPMTTIRKKIAEKLKEAQNTAALLTTFNEVDMGKVMELRAKYKDKFKEKYGLNLGFNGFFVKAAVEALKSFPAVNAYITGTDIEYHNYFNIGIAVSTEKGLMVPVVKDADTLSLAGIEMAVRDLALKGRDGKITPNDLSGGTFSITNGGVFGSLLSTPILNYPQSAIMGLHKIQDRPMAINGKVEIRPMMYVALTYDHRIIDGKEAVSFLVKIKELVEDPERLLLEV

Samples

Sample ID Description Type Environment
1 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
6 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
7 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
8 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
11 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
12 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
13 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
14 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
15 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
18 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
19 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
20 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
21 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
22 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
23 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
24 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
25 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
26 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
27 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
28 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
29 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
30 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
31 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
32 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
33 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
34 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
35 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
36 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
54 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
55 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
56 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
57 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
58 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
59 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
60 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
61 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
62 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
63 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
64 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
65 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
66 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
67 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
68 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
69 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
70 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
71 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
72 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
73 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
74 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
75 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
76 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
77 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
78 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
79 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
80 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
81 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
82 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
83 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
84 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
85 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
86 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
87 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
88 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
89 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
90 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
91 3300049759 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C13_A_4_drought Metagenome Rhizosphere
92 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
93 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
94 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
95 8015556637 Bdellovibrio reynosensis LBG001 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.25
Metatranscriptomes 0
Isolates 0.75

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 3.76
Rhizosphere 87.97
Stem 0
Stem Tuber 0
Unclassified 8.27

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065704_10070132 3300005289 Bacteria 1955461
2 Ga0070658_10007260 3300005327 Bacteria 8946
3 Ga0070683_100007910 3300005329 Bacteria 9014
4 Ga0070683_100013774 3300005329 Bacteria 7060
5 Ga0070683_100035383 3300005329 Bacteria 4566
6 Ga0070683_100251348 3300005329 Bacteria 1681
7 Ga0070680_100061584 3300005336 Bacteria 3072
8 Ga0070674_100026400 3300005356 Bacteria 3793
9 Ga0070688_100002156 3300005365 Bacteria 9921
10 Ga0070659_100010901 3300005366 Bacteria 6706
11 Ga0070709_10185742 3300005434 Bacteria 1463
12 Ga0070714_100018353 3300005435 Bacteria 5681
13 Ga0070714_100025917 3300005435 Bacteria 4842
14 Ga0070662_100026615 3300005457 Bacteria 4008
15 Ga0070681_10001691 3300005458 Bacteria 19741
16 Ga0068867_100041905 3300005459 Bacteria 3346
17 Ga0070685_10027490 3300005466 Bacteria 3145
18 Ga0070707_100002926 3300005468 Bacteria 16198
19 Ga0070707_100109955 3300005468 Bacteria 2673
20 Ga0070698_100017475 3300005471 Bacteria 7559
21 Ga0070698_100198633 3300005471 Bacteria 1941
22 Ga0070679_100001037 3300005530 Bacteria 24245
23 Ga0070679_100026933 3300005530 Bacteria 5653
24 Ga0070679_100034772 3300005530 Bacteria 4997
25 Ga0070679_100035447 3300005530 Bacteria 4951
26 Ga0070684_100012911 3300005535 Bacteria 6715
27 Ga0070672_100012902 3300005543 Bacteria 5887
28 Ga0068855_100072482 3300005563 Bacteria 4003
29 Ga0068855_100308623 3300005563 Bacteria 1751
30 Ga0068855_100349109 3300005563 Bacteria 1630
31 Ga0068862_100058750 3300005844 Bacteria 3300
32 Ga0081539_10000097 3300005985 Bacteria 202450
33 Ga0070717_10009576 3300006028 Bacteria 7287
34 Ga0075430_100004933 3300006846 Bacteria 11220
35 Ga0075434_100006925 3300006871 Bacteria 10448
36 Ga0075436_100063397 3300006914 Bacteria 2555
37 Ga0105240_10017969 3300009093 Bacteria 9513
38 Ga0105241_10000247 3300009174 Bacteria 40769
39 Ga0105248_10024359 3300009177 Bacteria 6731
40 Ga0105249_10138765 3300009553 Bacteria 2329
41 Ga0157370_10000502 3300013104 Bacteria 48831
42 Ga0157370_10026929 3300013104 Bacteria 5670
43 Ga0163162_10008356 3300013306 Bacteria 10093
44 Ga0157372_10050223 3300013307 Bacteria 4640
45 Ga0157372_10141074 3300013307 Bacteria 2776
46 Ga0163161_10263325 3300017792 Bacteria 1347
47 Ga0213873_10015652 3300021358 Bacteria 1702
48 Ga0213875_10000835 3300021388 Bacteria 22856
49 Ga0213875_10012477 3300021388 Bacteria 4194
50 Ga0213875_10050763 3300021388 Bacteria 1943
51 Ga0207705_10010712 3300025909 Bacteria 6656
52 Ga0207684_10007267 3300025910 Bacteria 10001
53 Ga0207654_10001366 3300025911 Bacteria 12960
54 Ga0207707_10092756 3300025912 Bacteria 2639
55 Ga0207707_10222227 3300025912 Bacteria 1644
56 Ga0207695_10037625 3300025913 Bacteria 5220
57 Ga0207693_10017954 3300025915 Bacteria 5640
58 Ga0207660_10047512 3300025917 Bacteria 3035
59 Ga0207657_10070502 3300025919 Bacteria 2962
60 Ga0207652_10003289 3300025921 Bacteria 13386
61 Ga0207652_10018731 3300025921 Bacteria 5682
62 Ga0207652_10024994 3300025921 Bacteria 4961
63 Ga0207646_10006176 3300025922 Bacteria 12454
64 Ga0207664_10130033 3300025929 Bacteria 2118
65 Ga0207706_10039462 3300025933 Bacteria 4186
66 Ga0207669_10008265 3300025937 Bacteria 4877
67 Ga0207665_10015964 3300025939 Bacteria 4931
68 Ga0207661_10006923 3300025944 Bacteria 8041
69 Ga0207661_10023116 3300025944 Bacteria 4693
70 Ga0207661_10029430 3300025944 Bacteria 4218
71 Ga0207661_10219064 3300025944 Bacteria 1681
72 Ga0207667_10243097 3300025949 Bacteria 1842
73 Ga0207702_10017382 3300026078 Bacteria 5951
74 Ga0307416_100178756 3300032002 Bacteria 1986
75 Ga0373934_0011167 3300035086 Bacteria 3381
76 Ga0373934_0017321 3300035086 Bacteria 2750
77 Ga0373954_0077159 3300035118 Bacteria 1589
78 Ga0373956_0040619 3300035119 Bacteria 2064
79 Ga0373946_0014166 3300035171 Bacteria 3005
80 Ga0373955_0010516 3300035172 Bacteria 4374
81 Ga0373933_0020245 3300035724 Bacteria 3770
82 Ga0373933_0045253 3300035724 Bacteria 2609
83 Ga0373937_0036174 3300036401 Bacteria 4498
84 Ga0373937_0037017 3300036401 Bacteria 4446
85 Ga0395899_0002507 3300037312 Bacteria 14894
86 Ga0395905_0000178 3300037471 Bacteria 101439
87 Ga0436364_0108855 3300037853 Bacteria 36564
88 Ga0436364_0666409 3300037853 Bacteria 3167
89 Ga0436364_0668296 3300037853 Bacteria 132076
90 Ga0436364_1158928 3300037853 Bacteria 2892
91 Ga0436365_1168591 3300039437 Bacteria 6976
92 Ga0436360_0616314 3300039438 Bacteria 1407
93 Ga0436361_0575515 3300039447 Bacteria 2154
94 Ga0436362_0474381 3300039453 Bacteria 1744
95 Ga0439439_0004669 3300041406 Bacteria 3096
96 Ga0466963_0030838 3300044694 Bacteria 3463
97 Ga0451576_0000345 3300045051 Bacteria 112164
98 Ga0466967_0112492 3300045976 Bacteria 2503
99 Ga0466967_0122414 3300045976 Bacteria 2406
100 Ga0495651_0035212 3300046462 Bacteria 3900
101 Ga0495639_0000043 3300046475 Bacteria 55213
102 Ga0495662_0092952 3300046476 Bacteria 1472
103 Ga0495608_0043377 3300046511 Bacteria 3005
104 Ga0495652_0047391 3300046529 Bacteria 3686
105 Ga0495587_0018689 3300046536 Bacteria 4297
106 Ga0495587_0024475 3300046536 Bacteria 3699
107 Ga0495645_0002376 3300046543 Bacteria 12770
108 Ga0495667_0002527 3300046559 Bacteria 12207
109 Ga0495667_0005581 3300046559 Bacteria 8510
110 Ga0495667_0116104 3300046559 Bacteria 1729
111 Ga0495599_0002328 3300046678 Bacteria 11032
112 Ga0495599_0082520 3300046678 Bacteria 2008
113 Ga0495636_0005121 3300047318 Bacteria 5146
114 Ga0495675_0005939 3300047444 Bacteria 7462
115 Ga0495675_0008647 3300047444 Bacteria 6314
116 Ga0495675_0036311 3300047444 Bacteria 3143
117 Ga0495602_0049223 3300048088 Bacteria 3777
118 Ga0496110_0003006 3300048913 Bacteria 12785
119 Ga0496110_0007292 3300048913 Bacteria 8820
120 Ga0496110_0075833 3300048913 Bacteria 2989
121 Ga0496111_0041505 3300048914 Bacteria 3302
122 Ga0496112_0013564 3300048915 Bacteria 7529
123 Ga0496124_0000005 3300048927 Bacteria 922323
124 Ga0496126_0021734 3300048929 Bacteria 6259
125 Ga0496126_0200810 3300048929 Bacteria 1684
126 Ga0501034_0038641 3300049571 Bacteria 4833
127 Ga0501037_0026479 3300049573 Bacteria 4287
128 Ga0501262_001075 3300049759 Bacteria 3105
129 Ga0501045_0189932 3300049824 Bacteria 1531
130 nmdc:mga0n895_16528_c1 3300050512 Bacteria 6774
131 nmdc:mga0n895_32828_c1 3300050512 Bacteria 4984
132 nmdc:mga0rr50_67568_c1 3300050513 Bacteria 2715

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300037471 Ga0395905_0000178 Ga0395905_0000178_51013_52311 300
2 3300013307 Ga0157372_10141074 Ga0157372_101410742 302
3 3300025909 Ga0207705_10010712 Ga0207705_100107125 302
4 3300035086 Ga0373934_0017321 Ga0373934_0017321_70_1332 306
5 3300035118 Ga0373954_0077159 Ga0373954_0077159_270_1532 306
6 3300035172 Ga0373955_0010516 Ga0373955_0010516_1281_2543 306
7 3300035724 Ga0373933_0020245 Ga0373933_0020245_1489_2751 306
8 3300036401 Ga0373937_0036174 Ga0373937_0036174_1772_3034 306
9 3300046462 Ga0495651_0035212 Ga0495651_0035212_1436_2698 306
10 3300046529 Ga0495652_0047391 Ga0495652_0047391_1727_2989 306
11 3300046536 Ga0495587_0024475 Ga0495587_0024475_1280_2542 306
12 3300046543 Ga0495645_0002376 Ga0495645_0002376_10031_11293 306
13 3300046559 Ga0495667_0005581 Ga0495667_0005581_5461_6723 306
14 3300046678 Ga0495599_0082520 Ga0495599_0082520_175_1437 306
15 3300047444 Ga0495675_0005939 Ga0495675_0005939_3338_4600 306
16 3300005530 Ga0070679_100026933 Ga0070679_1000269334 307
17 3300025921 Ga0207652_10018731 Ga0207652_100187315 307
18 3300039437 Ga0436365_1168591 Ga0436365_1168591_1274_2551 313
19 3300005468 Ga0070707_100002926 Ga0070707_1000029263 315
20 3300006871 Ga0075434_100006925 Ga0075434_1000069256 315
21 3300025922 Ga0207646_10006176 Ga0207646_100061763 315
22 3300050512 nmdc:mga0n895_16528_c1 nmdc:mga0n895_16528_c1_2812_4086 315
23 3300005365 Ga0070688_100002156 Ga0070688_1000021565 316
24 3300005466 Ga0070685_10027490 Ga0070685_100274903 316
25 3300032002 Ga0307416_100178756 Ga0307416_1001787563 317
26 3300005327 Ga0070658_10007260 Ga0070658_100072608 318
27 3300005366 Ga0070659_100010901 Ga0070659_1000109015 318
28 3300009177 Ga0105248_10024359 Ga0105248_100243593 318
29 3300041406 Ga0439439_0004669 Ga0439439_0004669_370_1818 320
30 3300005356 Ga0070674_100026400 Ga0070674_1000264002 321
31 3300005543 Ga0070672_100012902 Ga0070672_1000129024 321
32 3300013306 Ga0163162_10008356 Ga0163162_100083566 321
33 3300025937 Ga0207669_10008265 Ga0207669_100082652 321
34 3300045051 Ga0451576_0000345 Ga0451576_0000345_67672_68874 323
35 3300005329 Ga0070683_100007910 Ga0070683_1000079107 324
36 3300005530 Ga0070679_100034772 Ga0070679_1000347725 324
37 3300005563 Ga0068855_100349109 Ga0068855_1003491091 324
38 3300025921 Ga0207652_10024994 Ga0207652_100249941 324
39 3300025944 Ga0207661_10029430 Ga0207661_100294304 324
40 3300025944 Ga0207661_10219064 Ga0207661_102190642 324
41 3300046476 Ga0495662_0092952 Ga0495662_0092952_88_1329 325
42 3300005329 Ga0070683_100251348 Ga0070683_1002513482 326
43 3300005844 Ga0068862_100058750 Ga0068862_1000587502 326
44 3300025929 Ga0207664_10130033 Ga0207664_101300332 327
45 3300044694 Ga0466963_0030838 Ga0466963_0030838_883_2199 328
46 3300025919 Ga0207657_10070502 Ga0207657_100705023 329
47 3300025912 Ga0207707_10222227 Ga0207707_102222272 330
48 3300005434 Ga0070709_10185742 Ga0070709_101857421 331
49 3300005458 Ga0070681_10001691 Ga0070681_100016918 331
50 3300021388 Ga0213875_10050763 Ga0213875_100507632 331
51 3300025912 Ga0207707_10092756 Ga0207707_100927563 331
52 3300037853 Ga0436364_1158928 Ga0436364_1158928_987_2243 331
53 3300039438 Ga0436360_0616314 Ga0436360_0616314_26_1255 331
54 3300039447 Ga0436361_0575515 Ga0436361_0575515_132_1361 331
55 3300005329 Ga0070683_100035383 Ga0070683_1000353835 332
56 3300005336 Ga0070680_100061584 Ga0070680_1000615842 332
57 3300005435 Ga0070714_100018353 Ga0070714_1000183534 332
58 3300005563 Ga0068855_100308623 Ga0068855_1003086231 332
59 3300009553 Ga0105249_10138765 Ga0105249_101387651 332
60 3300025917 Ga0207660_10047512 Ga0207660_100475123 332
61 3300025944 Ga0207661_10023116 Ga0207661_100231162 332
62 3300005530 Ga0070679_100001037 Ga0070679_10000103726 334
63 3300005535 Ga0070684_100012911 Ga0070684_1000129113 334
64 3300005985 Ga0081539_10000097 Ga0081539_10000097120 334
65 3300006846 Ga0075430_100004933 Ga0075430_1000049332 334
66 3300006914 Ga0075436_100063397 Ga0075436_1000633974 334
67 3300025921 Ga0207652_10003289 Ga0207652_1000328914 334
68 3300045976 Ga0466967_0112492 Ga0466967_0112492_323_1633 334
69 3300049824 Ga0501045_0189932 Ga0501045_0189932_17_1357 334
70 3300050513 nmdc:mga0rr50_67568_c1 nmdc:mga0rr50_67568_c1_1023_2330 334
71 3300005471 Ga0070698_100198633 Ga0070698_1001986331 335
72 3300005530 Ga0070679_100035447 Ga0070679_1000354473 335
73 3300025910 Ga0207684_10007267 Ga0207684_100072676 335
74 3300035119 Ga0373956_0040619 Ga0373956_0040619_37_1359 335
75 3300035724 Ga0373933_0045253 Ga0373933_0045253_516_1838 335
76 3300036401 Ga0373937_0037017 Ga0373937_0037017_1837_3159 335
77 3300046511 Ga0495608_0043377 Ga0495608_0043377_1021_2343 335
78 3300046559 Ga0495667_0002527 Ga0495667_0002527_8931_10253 335
79 3300047444 Ga0495675_0008647 Ga0495675_0008647_703_2025 335
80 3300005457 Ga0070662_100026615 Ga0070662_1000266154 337
81 3300013104 Ga0157370_10000502 Ga0157370_100005029 337
82 3300025933 Ga0207706_10039462 Ga0207706_100394625 337
83 3300048913 Ga0496110_0007292 Ga0496110_0007292_3740_5068 337
84 3300048927 Ga0496124_0000005 Ga0496124_0000005_262132_263460 337
85 3300048929 Ga0496126_0021734 Ga0496126_0021734_1299_2594 337
86 3300025915 Ga0207693_10017954 Ga0207693_100179543 338
87 3300025939 Ga0207665_10015964 Ga0207665_100159641 338
88 3300005435 Ga0070714_100025917 Ga0070714_1000259173 339
89 3300009174 Ga0105241_10000247 Ga0105241_100002479 339
90 3300025911 Ga0207654_10001366 Ga0207654_100013662 339
91 3300026078 Ga0207702_10017382 Ga0207702_100173823 339
92 3300035086 Ga0373934_0011167 Ga0373934_0011167_1243_2574 339
93 3300046536 Ga0495587_0018689 Ga0495587_0018689_1284_2597 339
94 3300046678 Ga0495599_0002328 Ga0495599_0002328_3611_4924 339
95 3300047444 Ga0495675_0036311 Ga0495675_0036311_1745_3058 339
96 3300048088 Ga0495602_0049223 Ga0495602_0049223_479_1792 339
97 3300046475 Ga0495639_0000043 Ga0495639_0000043_39775_41091 340
98 3300048915 Ga0496112_0013564 Ga0496112_0013564_2855_4114 340
99 3300017792 Ga0163161_10263325 Ga0163161_102633251 341
100 3300049571 Ga0501034_0038641 Ga0501034_0038641_2726_4009 342
101 3300049759 Ga0501262_001075 Ga0501262_001075_445_1686 343
102 3300005329 Ga0070683_100013774 Ga0070683_1000137744 344
103 3300005563 Ga0068855_100072482 Ga0068855_1000724822 344
104 3300009093 Ga0105240_10017969 Ga0105240_100179695 344
105 3300013104 Ga0157370_10026929 Ga0157370_100269292 344
106 3300013307 Ga0157372_10050223 Ga0157372_100502234 344
107 3300021358 Ga0213873_10015652 Ga0213873_100156522 344
108 3300025913 Ga0207695_10037625 Ga0207695_100376252 344
109 3300025944 Ga0207661_10006923 Ga0207661_100069233 344
110 3300025949 Ga0207667_10243097 Ga0207667_102430971 344
111 3300039453 Ga0436362_0474381 Ga0436362_0474381_190_1575 344
112 3300048929 Ga0496126_0200810 Ga0496126_0200810_261_1577 344
113 3300045976 Ga0466967_0122414 Ga0466967_0122414_585_1895 345
114 3300049573 Ga0501037_0026479 Ga0501037_0026479_2446_3711 345
115 3300005468 Ga0070707_100109955 Ga0070707_1001099552 346
116 3300005471 Ga0070698_100017475 Ga0070698_1000174759 346
117 3300006028 Ga0070717_10009576 Ga0070717_100095769 346
118 3300021388 Ga0213875_10000835 Ga0213875_1000083516 346
119 3300021388 Ga0213875_10012477 Ga0213875_100124772 346
120 3300037312 Ga0395899_0002507 Ga0395899_0002507_7970_9160 346
121 3300037853 Ga0436364_0108855 Ga0436364_0108855_14161_15474 346
122 3300037853 Ga0436364_0668296 Ga0436364_0668296_109055_110308 346
123 3300046559 Ga0495667_0116104 Ga0495667_0116104_130_1380 346
124 3300050512 nmdc:mga0n895_32828_c1 nmdc:mga0n895_32828_c1_485_1798 346
125 3300037853 Ga0436364_0666409 Ga0436364_0666409_1692_3074 347
126 3300005459 Ga0068867_100041905 Ga0068867_1000419052 348
127 3300048913 Ga0496110_0075833 Ga0496110_0075833_610_1923 349
128 3300035171 Ga0373946_0014166 Ga0373946_0014166_396_1733 352
129 iso_pu_bacteria 8015556637 8015556748 352
130 3300047318 Ga0495636_0005121 Ga0495636_0005121_1902_3317 353
131 3300048913 Ga0496110_0003006 Ga0496110_0003006_2021_3289 353
132 3300048914 Ga0496111_0041505 Ga0496111_0041505_1339_2607 353
133 3300005289 Ga0065704_10070132 Ga0065704_10070132959 356

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00198

2-oxoacid_dh

2-oxoacid dehydrogenases acyltransferase (catalytic domain)

189

419

0.99

PF02817

E3_binding

e3 binding domain

114

149

0.97

PF00364

Biotin_lipoyl

Biotin-requiring enzyme

1

73

0.94

Feature Viewer

pLDDT pTM Quality
70.04 0.33 Low
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Predicted Structure (AlphaFold2)

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