F153581

General Info

Members Datasets Scaffolds Average Seq Length
132 93 123 591

Family's Representative Sequence

Representative Sequence 3300041404|Ga0439436_0004470|Ga0439436_0004470_1614_3611
Length 665
Sequence MVSVKRETANVKVLYSRLISSDRKSAKYLSFAKSQENLKSREPFHVSRFTFADSRFTIPYLANNKIHTPLTIMESTIAFYEKKVQQYINDLQVVKPIATLVAALRLACFIVFAWATYKWIAGHSTGWLVTALLLAVAFVVLVRIAWRLNDRVALLQKLLFINNNELNVLRHLPNSFDHGAAFSSNDNNSGDLDIFGPNSLYHLLNRTTTWHGKQQLAALLQQPLLPKNEIEEQQQAVQALSSQKELRQLLTAHGLLNEEKEGNLHDIDNWLQRPAIIHDKKWVQVMRFLVPAYSTVCLVIYLFTQNYSLLIPVVLVSWGIIGSFSKRIQDQHNLLGKKQSILDQYATILSLFSKVETGNSTLLQKEKAIAIEAHLAVKKLSRLSAMFDQRLNLIVNIFLNSFFMYDIQCLWALESWKKKHKAHFSDWIHCVGMIESLNALATFAANCPDYQYPVVHTDKIAISATQLAHPLIMAEERVANDCTFGIEEKLVLVTGSNMSGKTTFLRTLGVNLILAQCGAPVCAASFAFTPMVIRSSIRVSDSLQEHTSYFMAELKRLQQIIHYLQQNPAPVLILIDEILRGTNSEDKTHGSEQFIKKLLQYRCLTLFATHDLALSRLEDELAKQVNNYCFESTIRNNELLFDYKLQRGVAKNKNASFLMEKMEII

Samples

Sample ID Description Type Environment
1 2738541278 Niastella sp. CF465 Isolate Unclassified
2 2818991442 Chitinophaga pinensis 1204 Isolate Unclassified
3 2818991460 Chitinophaga polysaccharea 1209 Isolate Unclassified
4 2821136567 Chitinophaga sancti 1232 Isolate Unclassified
5 2883068021 Chitinophaga rhizosphaerae T16R-86 Isolate Rhizosphere
6 2884791551 Chitinophaga oryzae 1310 Isolate Unclassified
7 2904467357 Chitinophaga sancti 3198 Isolate Unclassified
8 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
9 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified
10 2945977869 Chitinophaga sp. W2I13 Isolate Rhizosphere
11 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere
12 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
13 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
14 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
15 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
16 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
17 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
18 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
19 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
20 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
21 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
22 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
23 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
24 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
25 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
26 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
27 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
28 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
29 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
30 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
31 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
33 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
34 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
35 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
36 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
37 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
38 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
39 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
40 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
41 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
42 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
43 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
44 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
45 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
46 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
47 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
56 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
57 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
58 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
59 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
60 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
61 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
62 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
63 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
64 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
65 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
66 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
67 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
68 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
69 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
70 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
71 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
72 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
73 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
74 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
75 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
76 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
77 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
78 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
79 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
80 3300050005 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought Metagenome Rhizosphere
81 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
82 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
83 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
84 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
85 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
86 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
87 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
88 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
89 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
90 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
91 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
92 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
93 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 91.67
Metatranscriptomes 0
Isolates 8.33

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 17.42
Nodule 0
Rhizoplane 0
Rhizosphere 62.12
Stem 0
Stem Tuber 0
Unclassified 20.45

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10077387 3300003316 Bacteria 8917
2 rootH2_10006073 3300003320 Bacteria 24220
3 rootH2_10038098 3300003320 Bacteria 24708
4 rootH2_10084321 3300003320 Bacteria 4917
5 rootH2_10107778 3300003320 Bacteria 3446
6 rootL2_10126101 3300003322 Unclassified 3382
7 rootL2_10229823 3300003322 Bacteria 3264
8 rootH1_10004108 3300003316 Bacteria 4092
9 rootH1_10004108 3300003323 Bacteria 4518
10 rootH1_10112443 3300003316 Bacteria 1181
11 rootH1_10112443 3300003323 Bacteria 3194
12 rootH1_10174582 3300003323 Bacteria 2362
13 Ga0055542_1002607 3300003762 Bacteria 5696
14 Ga0055531_10000193 3300003794 Bacteria 67836
15 Ga0065165_1017173 3300005262 Bacteria 2678
16 Ga0070683_100003497 3300005329 Bacteria 12773
17 Ga0070666_10016256 3300005335 Bacteria 4758
18 Ga0070691_10021782 3300005341 Bacteria 2968
19 Ga0070691_10034553 3300005341 Bacteria 2380
20 Ga0070681_10020372 3300005458 Bacteria 6647
21 Ga0070665_100000031 3300005548 Bacteria 333365
22 Ga0068855_100000108 3300005563 Bacteria 103059
23 Ga0068855_100134508 3300005563 Bacteria 2821
24 Ga0068856_100058338 3300005614 Unclassified 3812
25 Ga0068852_100008044 3300005616 Bacteria 7734
26 Ga0068860_100000082 3300005843 Bacteria 169805
27 Ga0068860_100004549 3300005843 Bacteria 14157
28 Ga0068860_100014629 3300005843 Bacteria 7679
29 Ga0081540_1006221 3300005983 Bacteria 8749
30 Ga0075366_10043729 3300006195 Bacteria 2653
31 Ga0105240_10000107 3300009093 Bacteria 171629
32 Ga0105240_10000180 3300009093 Bacteria 128683
33 Ga0105240_10001182 3300009093 Bacteria 45690
34 Ga0105240_10006876 3300009093 Bacteria 16622
35 Ga0105240_10012364 3300009093 Bacteria 11787
36 Ga0105240_10027605 3300009093 Bacteria 7430
37 Ga0105240_10036057 3300009093 Bacteria 6367
38 Ga0114129_10003278 3300009147 Bacteria 22719
39 Ga0105241_10000459 3300009174 Bacteria 30725
40 Ga0105237_10006425 3300009545 Bacteria 13043
41 Ga0105237_10015696 3300009545 Bacteria 7874
42 Ga0105237_10016056 3300009545 Bacteria 7786
43 Ga0105237_10048120 3300009545 Bacteria 4286
44 Ga0105239_10000168 3300010375 Bacteria 94279
45 Ga0105239_10001793 3300010375 Bacteria 28180
46 Ga0105239_10004628 3300010375 Bacteria 16354
47 Ga0105239_10012388 3300010375 Bacteria 9496
48 Ga0105239_10062868 3300010375 Bacteria 4075
49 Ga0105239_10126624 3300010375 Bacteria 2839
50 Ga0157370_10002549 3300013104 Bacteria 21863
51 Ga0157374_10000002 3300013296 Bacteria 1054226
52 Ga0163162_10000218 3300013306 Bacteria 52447
53 Ga0163162_10000266 3300013306 Bacteria 47442
54 Ga0157372_10000915 3300013307 Bacteria 32101
55 Ga0157372_10005580 3300013307 Bacteria 13377
56 Ga0157372_10042046 3300013307 Bacteria 5053
57 Ga0157376_10002194 3300014969 Bacteria 13160
58 Ga0182005_1000069 3300015265 Bacteria 85864
59 Ga0209436_101637 3300025208 Bacteria 7482
60 Ga0209258_100032 3300025242 Bacteria 452764
61 Ga0209646_1001373 3300025246 Bacteria 6705
62 Ga0209148_1000186 3300025254 Bacteria 117677
63 Ga0207426_1000033 3300025302 Bacteria 455976
64 Ga0209257_1000233 3300025304 Bacteria 129948
65 Ga0207680_10024809 3300025903 Unclassified 3297
66 Ga0207695_10000060 3300025913 Bacteria 360217
67 Ga0207695_10000077 3300025913 Bacteria 307107
68 Ga0207695_10000199 3300025913 Bacteria 166179
69 Ga0207695_10000833 3300025913 Bacteria 57159
70 Ga0207671_10003523 3300025914 Bacteria 15537
71 Ga0207671_10008016 3300025914 Bacteria 9039
72 Ga0207667_10003672 3300025949 Bacteria 18918
73 Ga0207667_10004180 3300025949 Bacteria 17735
74 Ga0207667_10108738 3300025949 Bacteria 2860
75 Ga0207674_10006881 3300026116 Bacteria 13325
76 Ga0207674_10087537 3300026116 Bacteria 3108
77 Ga0207698_10008641 3300026142 Bacteria 6452
78 Ga0268266_10000088 3300028379 Bacteria 199029
79 Ga0268264_10000470 3300028381 Bacteria 54746
80 Ga0268264_10003205 3300028381 Bacteria 14169
81 Ga0268264_10007079 3300028381 Bacteria 9398
82 Ga0307517_10005888 3300028786 Bacteria 18298
83 Ga0307511_10000114 3300030521 Bacteria 72895
84 Ga0307513_10055197 3300031456 Bacteria 4253
85 Ga0307509_10027036 3300031507 Bacteria 6389
86 Ga0307516_10002136 3300031730 Bacteria 26781
87 Ga0307510_10000074 3300033180 Bacteria 75194
88 Ga0373925_0065663 3300037068 Bacteria 2734
89 Ga0439436_0004470 3300041404 Bacteria 4286
90 Ga0466969_0000366 3300044656 Bacteria 24782
91 Ga0466972_0000117 3300044658 Bacteria 67234
92 Ga0466972_0004197 3300044658 Bacteria 7197
93 Ga0466966_0001023 3300044684 Bacteria 17865
94 Ga0466957_0002097 3300044842 Bacteria 10668
95 Ga0466959_0000111 3300045049 Bacteria 52637
96 Ga0495606_0014879 3300046507 Bacteria 6040
97 Ga0495648_0011522 3300046524 Bacteria 6650
98 Ga0495633_0000089 3300046558 Bacteria 123616
99 Ga0495668_0003942 3300046616 Bacteria 10835
100 Ga0495672_0025997 3300047320 Unclassified 3741
101 Ga0495687_000010 3300047443 Bacteria 413735
102 Ga0495686_0000102 3300047472 Bacteria 177525
103 Ga0496121_0000086 3300048924 Bacteria 223703
104 Ga0496126_0023924 3300048929 Bacteria 5907
105 Ga0501047_0126105 3300049581 Unclassified 2440
106 Ga0501225_0002706 3300049705 Bacteria 5443
107 Ga0501241_000632 3300049758 Bacteria 7554
108 Ga0501284_00028 3300050005 Bacteria 76036
109 nmdc:mga05p37_57888_c1 3300050507 Bacteria 4773
110 Ga0500578_0000097 3300053086 Bacteria 100607
111 Ga0500578_0016194 3300053086 Bacteria 4787
112 Ga0500644_0000042 3300053088 Bacteria 76909
113 Ga0500646_0002707 3300053090 Bacteria 4577
114 Ga0500583_0000029 3300053092 Bacteria 107304
115 Ga0500583_0000570 3300053092 Bacteria 11171
116 Ga0500651_0030865 3300053093 Bacteria 3374
117 Ga0500569_000400 3300053109 Bacteria 7059
118 Ga0500658_0000547 3300053134 Bacteria 15809
119 Ga0500568_0005218 3300053139 Bacteria 6764
120 Ga0500577_0001003 3300053142 Bacteria 7274
121 Ga0500616_0028937 3300053153 Bacteria 3051
122 Ga0500622_0000371 3300053156 Bacteria 43288
123 Ga0500636_0051712 3300053177 Bacteria 2415

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025914 Ga0207671_10003523 Ga0207671_100035233 522
2 3300005843 Ga0068860_100014629 Ga0068860_1000146294 523
3 3300013306 Ga0163162_10000266 Ga0163162_1000026640 523
4 3300028381 Ga0268264_10007079 Ga0268264_100070795 523
5 3300009545 Ga0105237_10015696 Ga0105237_100156965 535
6 3300009545 Ga0105237_10006425 Ga0105237_100064253 546
7 3300044658 Ga0466972_0004197 Ga0466972_0004197_4756_6537 548
8 3300003320 rootH2_10084321 rootH2_100843213 549
9 3300003322 rootL2_10126101 rootL2_101261012 550
10 3300003323 rootH1_10174582 rootH1_101745822 552
11 3300009093 Ga0105240_10027605 Ga0105240_100276056 557
12 3300013307 Ga0157372_10000915 Ga0157372_1000091521 557
13 3300046524 Ga0495648_0011522 Ga0495648_0011522_2826_4547 557
14 3300003794 Ga0055531_10000193 Ga0055531_1000019338 558
15 3300025304 Ga0209257_1000233 Ga0209257_100023382 558
16 3300015265 Ga0182005_1000069 Ga0182005_100006972 559
17 3300053092 Ga0500583_0000570 Ga0500583_0000570_3931_5712 559
18 3300031456 Ga0307513_10055197 Ga0307513_100551972 560
19 3300033180 Ga0307510_10000074 Ga0307510_1000007452 562
20 3300046507 Ga0495606_0014879 Ga0495606_0014879_3501_5303 562
21 3300010375 Ga0105239_10001793 Ga0105239_1000179320 563
22 3300053086 Ga0500578_0000097 Ga0500578_0000097_35206_36987 563
23 3300025246 Ga0209646_1001373 Ga0209646_10013734 564
24 3300044658 Ga0466972_0000117 Ga0466972_0000117_6436_8220 564
25 3300005843 Ga0068860_100004549 Ga0068860_1000045498 565
26 3300009093 Ga0105240_10036057 Ga0105240_100360576 565
27 3300009545 Ga0105237_10016056 Ga0105237_100160567 565
28 3300010375 Ga0105239_10012388 Ga0105239_100123883 565
29 3300025914 Ga0207671_10008016 Ga0207671_100080163 565
30 3300028381 Ga0268264_10003205 Ga0268264_100032054 565
31 3300050005 Ga0501284_00028 Ga0501284_00028_19329_21113 565
32 3300005335 Ga0070666_10016256 Ga0070666_100162564 569
33 3300025903 Ga0207680_10024809 Ga0207680_100248093 569
34 3300046616 Ga0495668_0003942 Ga0495668_0003942_4362_6143 570
35 3300053092 Ga0500583_0000029 Ga0500583_0000029_20739_22595 570
36 3300053086 Ga0500578_0016194 Ga0500578_0016194_2929_4713 571
37 3300005458 Ga0070681_10020372 Ga0070681_100203725 572
38 iso_pu_bacteria 2818991442 2819574659 572
39 iso_pu_bacteria 2821136567 2821140751 572
40 iso_pu_bacteria 2883068021 2883071371 572
41 iso_pu_bacteria 2884791551 2884796418 572
42 iso_pu_bacteria 2904467357 2904471253 572
43 iso_pu_bacteria 2929177148 2929178068 572
44 iso_pu_bacteria 2929239360 2929240394 572
45 iso_pu_bacteria 2945977869 2945980427 572
46 iso_pu_bacteria 2946013367 2946013710 572
47 3300005614 Ga0068856_100058338 Ga0068856_1000583383 573
48 3300031507 Ga0307509_10027036 Ga0307509_100270364 573
49 3300003320 rootH2_10006073 rootH2_100060733 574
50 3300005563 Ga0068855_100134508 Ga0068855_1001345083 574
51 3300005983 Ga0081540_1006221 Ga0081540_10062214 574
52 3300010375 Ga0105239_10000168 Ga0105239_1000016819 574
53 3300013307 Ga0157372_10005580 Ga0157372_100055809 574
54 3300025949 Ga0207667_10108738 Ga0207667_101087382 574
55 3300047320 Ga0495672_0025997 Ga0495672_0025997_1948_3717 574
56 3300047472 Ga0495686_0000102 Ga0495686_0000102_83086_84906 574
57 iso_pu_bacteria 2738541278 2738730387 574
58 iso_pu_bacteria 2818991460 2819676557 574
59 3300030521 Ga0307511_10000114 Ga0307511_1000011434 575
60 3300053156 Ga0500622_0000371 Ga0500622_0000371_36395_38173 575
61 3300003320 rootH2_10038098 rootH2_1003809810 576
62 3300003320 rootH2_10107778 rootH2_101077782 576
63 3300003322 rootL2_10229823 rootL2_102298232 576
64 3300003323 rootH1_10112443 rootH1_101124432 576
65 3300003762 Ga0055542_1002607 Ga0055542_10026072 576
66 3300005262 Ga0065165_1017173 Ga0065165_10171732 576
67 3300005329 Ga0070683_100003497 Ga0070683_1000034978 576
68 3300005341 Ga0070691_10021782 Ga0070691_100217823 576
69 3300005341 Ga0070691_10034553 Ga0070691_100345532 576
70 3300005563 Ga0068855_100000108 Ga0068855_10000010834 576
71 3300009093 Ga0105240_10000107 Ga0105240_10000107130 576
72 3300009093 Ga0105240_10000180 Ga0105240_1000018096 576
73 3300009093 Ga0105240_10006876 Ga0105240_100068769 576
74 3300010375 Ga0105239_10062868 Ga0105239_100628682 576
75 3300010375 Ga0105239_10126624 Ga0105239_101266243 576
76 3300013296 Ga0157374_10000002 Ga0157374_10000002644 576
77 3300014969 Ga0157376_10002194 Ga0157376_100021943 576
78 3300025242 Ga0209258_100032 Ga0209258_100032200 576
79 3300025254 Ga0209148_1000186 Ga0209148_100018675 576
80 3300025913 Ga0207695_10000060 Ga0207695_10000060138 576
81 3300025913 Ga0207695_10000077 Ga0207695_1000007715 576
82 3300025913 Ga0207695_10000199 Ga0207695_1000019916 576
83 3300025949 Ga0207667_10003672 Ga0207667_1000367210 576
84 3300026116 Ga0207674_10087537 Ga0207674_100875373 576
85 3300046558 Ga0495633_0000089 Ga0495633_0000089_93481_95262 576
86 3300048924 Ga0496121_0000086 Ga0496121_0000086_7896_9677 576
87 3300048929 Ga0496126_0023924 Ga0496126_0023924_4001_5782 576
88 3300049758 Ga0501241_000632 Ga0501241_000632_574_2355 576
89 3300053088 Ga0500644_0000042 Ga0500644_0000042_24791_26572 576
90 3300053090 Ga0500646_0002707 Ga0500646_0002707_2530_4311 576
91 3300053093 Ga0500651_0030865 Ga0500651_0030865_312_2093 576
92 3300053109 Ga0500569_000400 Ga0500569_000400_2106_3887 576
93 3300053134 Ga0500658_0000547 Ga0500658_0000547_1132_2913 576
94 3300053142 Ga0500577_0001003 Ga0500577_0001003_3171_4952 576
95 3300053153 Ga0500616_0028937 Ga0500616_0028937_101_1882 576
96 3300053177 Ga0500636_0051712 Ga0500636_0051712_39_1820 576
97 3300005548 Ga0070665_100000031 Ga0070665_100000031115 577
98 3300005616 Ga0068852_100008044 Ga0068852_1000080443 577
99 3300005843 Ga0068860_100000082 Ga0068860_10000008212 577
100 3300009093 Ga0105240_10001182 Ga0105240_1000118211 577
101 3300009093 Ga0105240_10012364 Ga0105240_100123641 577
102 3300009174 Ga0105241_10000459 Ga0105241_1000045922 577
103 3300009545 Ga0105237_10048120 Ga0105237_100481204 577
104 3300013104 Ga0157370_10002549 Ga0157370_100025498 577
105 3300013306 Ga0163162_10000218 Ga0163162_1000021835 577
106 3300013307 Ga0157372_10042046 Ga0157372_100420464 577
107 3300025208 Ga0209436_101637 Ga0209436_1016375 577
108 3300025302 Ga0207426_1000033 Ga0207426_1000033311 577
109 3300025913 Ga0207695_10000833 Ga0207695_1000083333 577
110 3300025949 Ga0207667_10004180 Ga0207667_1000418010 577
111 3300026116 Ga0207674_10006881 Ga0207674_100068812 577
112 3300026142 Ga0207698_10008641 Ga0207698_100086415 577
113 3300028379 Ga0268266_10000088 Ga0268266_100000888 577
114 3300028381 Ga0268264_10000470 Ga0268264_1000047012 577
115 3300028786 Ga0307517_10005888 Ga0307517_100058885 577
116 3300031730 Ga0307516_10002136 Ga0307516_1000213614 577
117 3300047443 Ga0495687_000010 Ga0495687_000010_271676_273457 577
118 3300053139 Ga0500568_0005218 Ga0500568_0005218_2906_4687 577
119 3300003316 rootH1_10077387 rootH1_100773875 578
120 3300003323 rootH1_10004108 rootH1_100041083 578
121 3300006195 Ga0075366_10043729 Ga0075366_100437292 578
122 3300009147 Ga0114129_10003278 Ga0114129_100032782 578
123 3300010375 Ga0105239_10004628 Ga0105239_100046282 578
124 3300037068 Ga0373925_0065663 Ga0373925_0065663_250_2031 578
125 3300041404 Ga0439436_0004470 Ga0439436_0004470_1614_3611 578
126 3300044656 Ga0466969_0000366 Ga0466969_0000366_9943_11724 578
127 3300044684 Ga0466966_0001023 Ga0466966_0001023_1174_2955 578
128 3300044842 Ga0466957_0002097 Ga0466957_0002097_6147_7928 578
129 3300045049 Ga0466959_0000111 Ga0466959_0000111_43823_45604 578
130 3300049581 Ga0501047_0126105 Ga0501047_0126105_31_1812 578
131 3300049705 Ga0501225_0002706 Ga0501225_0002706_1332_3113 578
132 3300050507 nmdc:mga05p37_57888_c1 nmdc:mga05p37_57888_c1_1890_3671 578

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00488

MutS_V

MutS domain V

491

662

0.91

PF05192

MutS_III

MutS domain III

172

444

0.66

Structural Annotation

Top 5 Hits

ID Description Score Start End
8szz-assembly1.cif.gz_T cryoem structure of computationally designed nanocage o32-zl4 0.9387 17 80
8szz-assembly1.cif.gz_Q cryoem structure of computationally designed nanocage o32-zl4 0.9311 17 80
8szz-assembly1.cif.gz_W cryoem structure of computationally designed nanocage o32-zl4 0.9295 17 80
8szz-assembly1.cif.gz_s cryoem structure of computationally designed nanocage o32-zl4 0.9275 17 80
8szz-assembly1.cif.gz_v cryoem structure of computationally designed nanocage o32-zl4 0.9235 17 80
ID Description Score Start End Superfamily
af_P11387_587_765_1.10.132.10 Mainly Alpha;Orthogonal Bundle;Topoisomerase I; Chain A, domain 4; 0.9425 15 81 1.10.132.10
af_Q2FWL3_316_535_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9334 363 578 3.40.50.300
af_P43247_620_934_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9259 365 576 3.40.50.300
af_P43248_618_913_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9206 365 576 3.40.50.300
af_Q9TXR4_592_846_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9185 365 578 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A2T4RNE7-F1-model_v4 deleted 0.9604 363 524
AF-A0A2T4RNE7-F1-model_v4 deleted 0.9485 363 524
AF-A0A521PCT8-F1-model_v4 DNA mismatch repair proteins mutS family domain-containing protein 0.9477 1 578 GO:0005524
GO:0005829
GO:0006298
GO:0016020
GO:0030983
GO:0140664
AF-A0A521PCT8-F1-model_v4 DNA mismatch repair proteins mutS family domain-containing protein 0.9461 1 578 GO:0005524
GO:0005829
GO:0006298
GO:0016020
GO:0030983
GO:0140664
AF-A0A2E5RMJ7-F1-model_v4 DNA mismatch repair proteins mutS family domain-containing protein 0.9411 2 578 GO:0005524
GO:0005829
GO:0006298
GO:0016020
GO:0030983
GO:0140664

Feature Viewer

pLDDT pTM Quality
82.96 0.78 High
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Predicted Structure (AlphaFold2)

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