F150712

General Info

Members Datasets Scaffolds Average Seq Length
131 106 262 539

Family's Representative Sequence

Representative Sequence 3300049823|Ga0501044_0095583|Ga0501044_0095583_161_2080
Length 616
Sequence LPSTNQQGVDCDSVSRTNHFASQERISALLEHAVRVSGVACSSASSPNESQLAVSELLLESRPLTLQDFCEVRERLAPAIDGRTLVAQLLEEQQQLTAVERFAMDHDPRRPPDQARYYSKLLPAGQPAPGQQYAFEVDLDRCSGCKACVTGCHALNGLDRNETWRDVGLLVGGTESHPVMQHVTAACHHCLDPGCMNACPVDAYEKDPVTGIVRHLDDQCFGCQYMCSGRLARGEAPACVQACPHEAIAIRIVDVAQVMENAEINDFLPAAPEPHLTLPTTTYKSSRNFPRNMLPADYYSISPQHPHWPLIIMLVLTQLSVGAFLTGCVMERSLDSRLVPVFRPFHATAALLLGLLALGASTLHLGRPQYAFRGMIGLRHSWLSREILTFGLFAGLAIPFAAVSWGISLVQAPFPGRAFLLQLLPGLGLAVGLMGGVGVFCSAMIYVYTKKELWSFGRTVTRFGLTSAILGIATVRLSLSVTARFVDAETGHRLSAKMARPLAESLMIVSAAKLVFDAWLLHHLFNFRNTPLKRSALLVTGVLSRISLSRVIAGALGGILIPALVLSRLTNSPQAGGAELSSILAIWIFSLIAELCERYLFFAAVSAPRMPGGIRS

Samples

Sample ID Description Type Environment
1 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
9 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
10 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
11 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
14 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
17 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
18 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
19 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
20 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
21 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
22 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
23 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
24 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
25 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
26 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
27 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
28 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
29 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
30 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
31 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
33 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
48 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
50 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
51 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
52 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
53 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
54 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
55 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
56 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
57 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
58 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
59 3300034817 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 Metagenome Rhizosphere
60 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
61 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
62 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
63 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
64 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
65 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
66 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
67 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
68 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
69 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
70 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
71 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
72 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
73 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
74 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
75 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
76 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
77 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
78 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
79 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
80 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
81 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
82 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
83 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
84 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
85 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
86 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
87 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
88 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
89 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
90 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
91 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
93 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
94 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
95 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
96 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
97 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
98 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
99 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
100 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
101 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
102 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
103 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
104 2684623219 Planctomyces sp. SH-PL14 Isolate Unclassified
105 2687453257 Planctomyces sp. SH-PL62 Isolate Unclassified
106 2786546548 Spartobacteria bacterium LR76 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.71
Metatranscriptomes 0
Isolates 2.29

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.58
Nodule 0
Rhizoplane 3.05
Rhizosphere 84.73
Stem 0
Stem Tuber 0
Unclassified 3.05

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501044_0095583 3300049823 Bacteria 2994
2 rootH2_10021166 3300003320 Bacteria 19775
3 JGI25407J50210_10001912 3300003373 Bacteria 4833
4 Ga0070683_100079507 3300005329 Bacteria 3069
5 Ga0068869_100043382 3300005334 Bacteria 3230
6 Ga0070682_100000585 3300005337 Bacteria 22211
7 Ga0070682_100002196 3300005337 Bacteria 10813
8 Ga0070660_100075769 3300005339 Bacteria 2634
9 Ga0070671_100001365 3300005355 Bacteria 18297
10 Ga0070673_100011618 3300005364 Bacteria 6015
11 Ga0070701_10017051 3300005438 Bacteria 3389
12 Ga0070708_100014856 3300005445 Bacteria 6418
13 Ga0070708_100028512 3300005445 Bacteria 4805
14 Ga0070681_10039761 3300005458 Bacteria 4715
15 Ga0070681_10123175 3300005458 Unclassified 2525
16 Ga0070685_10015242 3300005466 Unclassified 4081
17 Ga0070698_100017892 3300005471 Bacteria 7466
18 Ga0070679_100140641 3300005530 Bacteria 2393
19 Ga0070684_100000879 3300005535 Bacteria 21216
20 Ga0070684_100083258 3300005535 Bacteria 2834
21 Ga0070697_100012535 3300005536 Bacteria 6642
22 Ga0070665_100001449 3300005548 Bacteria 27784
23 Ga0068855_100168539 3300005563 Bacteria 2481
24 Ga0068856_100001391 3300005614 Bacteria 25443
25 Ga0068864_100182137 3300005618 Bacteria 1921
26 Ga0068861_100003441 3300005719 Bacteria 10510
27 Ga0068858_100038375 3300005842 Bacteria 4443
28 Ga0081455_10047828 3300005937 Bacteria 3700
29 Ga0081455_10051251 3300005937 Bacteria 3541
30 Ga0081538_10000090 3300005981 Bacteria 88729
31 Ga0075365_10126265 3300006038 Bacteria 1768
32 Ga0075363_100019174 3300006048 Bacteria 3417
33 Ga0075364_10002358 3300006051 Bacteria 10612
34 Ga0068871_100114664 3300006358 Bacteria 2271
35 Ga0075429_100008548 3300006880 Bacteria 8905
36 Ga0111539_10029050 3300009094 Bacteria 6741
37 Ga0105238_10000150 3300009551 Bacteria 76417
38 Ga0105238_10190199 3300009551 Bacteria 2029
39 Ga0207684_10001605 3300025910 Bacteria 24021
40 Ga0207707_10046490 3300025912 Bacteria 3781
41 Ga0207707_10141946 3300025912 Unclassified 2100
42 Ga0207652_10094541 3300025921 Bacteria 2632
43 Ga0207694_10001585 3300025924 Bacteria 19257
44 Ga0207694_10026187 3300025924 Bacteria 4434
45 Ga0207670_10014920 3300025936 Bacteria 4627
46 Ga0207689_10061019 3300025942 Bacteria 3101
47 Ga0207667_10002431 3300025949 Bacteria 23321
48 Ga0207667_10157105 3300025949 Bacteria 2340
49 Ga0207651_10002038 3300025960 Bacteria 9499
50 Ga0207703_10019835 3300026035 Bacteria 5255
51 Ga0207678_10017787 3300026067 Bacteria 6241
52 Ga0207702_10003478 3300026078 Bacteria 14352
53 Ga0207641_10026156 3300026088 Bacteria 4815
54 Ga0207676_10031133 3300026095 Bacteria 4011
55 Ga0207676_10151435 3300026095 Bacteria 1998
56 Ga0207675_100023499 3300026118 Bacteria 5734
57 Ga0207675_100146741 3300026118 Bacteria 2244
58 Ga0207428_10008570 3300027907 Bacteria 9227
59 Ga0268266_10000984 3300028379 Bacteria 35994
60 Ga0265334_10012723 3300028573 Bacteria 3533
61 Ga0307515_10006650 3300028794 Bacteria 23041
62 Ga0307511_10058928 3300030521 Bacteria 2960
63 Ga0265332_10017164 3300031238 Bacteria 3193
64 Ga0265339_10000294 3300031249 Bacteria 40571
65 Ga0265327_10021274 3300031251 Bacteria 3918
66 Ga0265316_10001273 3300031344 Bacteria 27080
67 Ga0307509_10011147 3300031507 Bacteria 10933
68 Ga0265314_10000002 3300031711 Bacteria 2092193
69 Ga0373930_0000560 3300034816 Bacteria 5126
70 Ga0373948_0000935 3300034817 Bacteria 3910
71 Ga0373950_0000011 3300034818 Bacteria 365678
72 Ga0373928_0006575 3300035084 Bacteria 2235
73 Ga0373929_0006069 3300035085 Bacteria 2181
74 Ga0373932_0001013 3300035112 Bacteria 8122
75 Ga0373943_0019801 3300035170 Bacteria 3098
76 Ga0373931_0000013 3300035691 Bacteria 266932
77 Ga0373931_0000119 3300035691 Bacteria 35668
78 Ga0373927_0000474 3300035695 Bacteria 30804
79 Ga0373925_0000389 3300037068 Bacteria 44891
80 Ga0395905_0064144 3300037471 Bacteria 3437
81 Ga0436360_0900692 3300039438 Bacteria 5184
82 Ga0436361_1153085 3300039447 Bacteria 4456
83 Ga0436362_0397471 3300039453 Bacteria 8894
84 Ga0451833_0168122 3300041491 Bacteria 1555
85 Ga0451841_0131016 3300041498 Bacteria 4740
86 Ga0451853_0137650 3300041512 Bacteria 36970
87 Ga0451577_0264652 3300042876 Bacteria 1557
88 Ga0453683_0018158 3300044673 Unclassified 4518
89 Ga0451576_0080582 3300045051 Bacteria 3387
90 Ga0451576_0209520 3300045051 Bacteria 2036
91 Ga0495664_0007224 3300046477 Bacteria 6159
92 Ga0495630_0007070 3300046517 Bacteria 7995
93 Ga0495586_0012871 3300046535 Bacteria 4436
94 Ga0495634_0002044 3300046642 Bacteria 17111
95 Ga0495599_0048718 3300046678 Bacteria 2656
96 Ga0495674_0002022 3300047319 Bacteria 19948
97 Ga0496100_0005531 3300048903 Bacteria 6818
98 Ga0496106_0175499 3300048909 Bacteria 1700
99 Ga0496107_0039774 3300048910 Bacteria 3374
100 Ga0496114_0008114 3300048917 Bacteria 8319
101 Ga0501033_0016543 3300049570 Bacteria 5583
102 Ga0501034_0013106 3300049571 Bacteria 8543
103 Ga0501034_0062260 3300049571 Bacteria 3747
104 Ga0501034_0141834 3300049571 Bacteria 2382
105 Ga0501038_0000500 3300049574 Bacteria 34410
106 Ga0501046_0005982 3300049580 Bacteria 10829
107 Ga0501046_0011881 3300049580 Bacteria 7431
108 Ga0501047_0009457 3300049581 Bacteria 9208
109 Ga0501047_0017252 3300049581 Bacteria 6912
110 Ga0501047_0019586 3300049581 Bacteria 6493
111 Ga0501067_0000114 3300049583 Bacteria 45136
112 Ga0501067_0024566 3300049583 Bacteria 3342
113 Ga0501070_0000396 3300049586 Bacteria 39887
114 Ga0501070_0015200 3300049586 Bacteria 6480
115 Ga0501073_0013667 3300049589 Bacteria 5905
116 Ga0501073_0019631 3300049589 Bacteria 4876
117 Ga0501073_0027648 3300049589 Bacteria 4054
118 Ga0501074_0101802 3300049590 Bacteria 2056
119 Ga0501080_0127547 3300049742 Bacteria 2355
120 Ga0501083_0001523 3300049744 Bacteria 15841
121 Ga0501044_0037597 3300049823 Bacteria 5059
122 nmdc:mga0yw44_27424_c1 3300050492 Bacteria 3261
123 nmdc:mga0yw44_8933_c1 3300050492 Bacteria 5028
124 nmdc:mga0qj67_44451_c1 3300050509 Bacteria 3500
125 nmdc:mga08y16_29902_c1 3300050511 Bacteria 5737
126 nmdc:mga08y16_8763_c1 3300050511 Bacteria 10614
127 Ga0500614_002511 3300053123 Bacteria 4077
128 Ga0501082_0030447 3300060353 Bacteria 4651
129 2687235086 2684623219 Bacteria 8442773
130 2688068245 2687453257 Bacteria 6784659
131 2787508481 2786546548 Bacteria 4745694
132 Ga0501044_0095583
133 rootH2_10021166
134 JGI25407J50210_10001912
135 Ga0070683_100079507
136 Ga0068869_100043382
137 Ga0070682_100000585
138 Ga0070682_100002196
139 Ga0070660_100075769
140 Ga0070671_100001365
141 Ga0070673_100011618
142 Ga0070701_10017051
143 Ga0070708_100014856
144 Ga0070708_100028512
145 Ga0070681_10039761
146 Ga0070681_10123175
147 Ga0070685_10015242
148 Ga0070698_100017892
149 Ga0070679_100140641
150 Ga0070684_100000879
151 Ga0070684_100083258
152 Ga0070697_100012535
153 Ga0070665_100001449
154 Ga0068855_100168539
155 Ga0068856_100001391
156 Ga0068864_100182137
157 Ga0068861_100003441
158 Ga0068858_100038375
159 Ga0081455_10047828
160 Ga0081455_10051251
161 Ga0081538_10000090
162 Ga0075365_10126265
163 Ga0075363_100019174
164 Ga0075364_10002358
165 Ga0068871_100114664
166 Ga0075429_100008548
167 Ga0111539_10029050
168 Ga0105238_10000150
169 Ga0105238_10190199
170 Ga0207684_10001605
171 Ga0207707_10046490
172 Ga0207707_10141946
173 Ga0207652_10094541
174 Ga0207694_10001585
175 Ga0207694_10026187
176 Ga0207670_10014920
177 Ga0207689_10061019
178 Ga0207667_10002431
179 Ga0207667_10157105
180 Ga0207651_10002038
181 Ga0207703_10019835
182 Ga0207678_10017787
183 Ga0207702_10003478
184 Ga0207641_10026156
185 Ga0207676_10031133
186 Ga0207676_10151435
187 Ga0207675_100023499
188 Ga0207675_100146741
189 Ga0207428_10008570
190 Ga0268266_10000984
191 Ga0265334_10012723
192 Ga0307515_10006650
193 Ga0307511_10058928
194 Ga0265332_10017164
195 Ga0265339_10000294
196 Ga0265327_10021274
197 Ga0265316_10001273
198 Ga0307509_10011147
199 Ga0265314_10000002
200 Ga0373930_0000560
201 Ga0373948_0000935
202 Ga0373950_0000011
203 Ga0373928_0006575
204 Ga0373929_0006069
205 Ga0373932_0001013
206 Ga0373943_0019801
207 Ga0373931_0000013
208 Ga0373931_0000119
209 Ga0373927_0000474
210 Ga0373925_0000389
211 Ga0395905_0064144
212 Ga0436360_0900692
213 Ga0436361_1153085
214 Ga0436362_0397471
215 Ga0451833_0168122
216 Ga0451841_0131016
217 Ga0451853_0137650
218 Ga0451577_0264652
219 Ga0453683_0018158
220 Ga0451576_0080582
221 Ga0451576_0209520
222 Ga0495664_0007224
223 Ga0495630_0007070
224 Ga0495586_0012871
225 Ga0495634_0002044
226 Ga0495599_0048718
227 Ga0495674_0002022
228 Ga0496100_0005531
229 Ga0496106_0175499
230 Ga0496107_0039774
231 Ga0496114_0008114
232 Ga0501033_0016543
233 Ga0501034_0013106
234 Ga0501034_0062260
235 Ga0501034_0141834
236 Ga0501038_0000500
237 Ga0501046_0005982
238 Ga0501046_0011881
239 Ga0501047_0009457
240 Ga0501047_0017252
241 Ga0501047_0019586
242 Ga0501067_0000114
243 Ga0501067_0024566
244 Ga0501070_0000396
245 Ga0501070_0015200
246 Ga0501073_0013667
247 Ga0501073_0019631
248 Ga0501073_0027648
249 Ga0501074_0101802
250 Ga0501080_0127547
251 Ga0501083_0001523
252 Ga0501044_0037597
253 nmdc:mga0yw44_27424_c1
254 nmdc:mga0yw44_8933_c1
255 nmdc:mga0qj67_44451_c1
256 nmdc:mga08y16_29902_c1
257 nmdc:mga08y16_8763_c1
258 Ga0500614_002511
259 Ga0501082_0030447
260 2687235086
261 2688068245
262 2787508481

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04976

DmsC

DMSO reductase anchor subunit (DmsC)

303

603

0.62

Structural Annotation

Top 5 Hits

ID Description Score Start End
1kqf-assembly1.cif.gz_B formate dehydrogenase n from e. coli 0.9078 72 215
1r27-assembly1.cif.gz_B crystal structure of nargh complex 0.8822 71 215
3egw-assembly1.cif.gz_B the crystal structure of the narghi mutant narh - c16a 0.8722 71 215
1y4z-assembly1.cif.gz_B the crystal structure of nitrate reductase a, narghi, in complex with the q-site inhibitor pentachlorophenol 0.8704 71 215
3ir5-assembly1.cif.gz_B crystal structure of narghi mutant narg-h49c 0.8669 71 215
ID Description Score Start End Superfamily
af_P32709_7_307_1.20.1630.10 Mainly Alpha;Up-down Bundle;Formate dehydrogenase/DMSO reductase fold;Formate dehydrogenase/DMSO reductase domain 0.8016 273 538 1.20.1630.10
af_P76173_1_274_1.20.1630.10 Mainly Alpha;Up-down Bundle;Formate dehydrogenase/DMSO reductase fold;Formate dehydrogenase/DMSO reductase domain 0.7887 273 542 1.20.1630.10
af_P76173_1_274_1.20.1630.10 Mainly Alpha;Up-down Bundle;Formate dehydrogenase/DMSO reductase fold;Formate dehydrogenase/DMSO reductase domain 0.762 273 542 1.20.1630.10
1kqgB02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.7273 72 214 3.30.70.20
af_P32709_7_307_1.20.1630.10 Mainly Alpha;Up-down Bundle;Formate dehydrogenase/DMSO reductase fold;Formate dehydrogenase/DMSO reductase domain 0.7161 273 538 1.20.1630.10
ID Description Score Start End GO Terms
AF-A0A2S1B8X9-F1-model_v4 deleted 0.9515 72 213
AF-A0A6I5ZLU1-F1-model_v4 4Fe-4S dicluster domain protein 0.9511 72 213 GO:0046872
GO:0051539
AF-A0A101XRK6-F1-model_v4 4Fe-4S ferredoxin-type domain-containing protein 0.9501 75 212 GO:0051539
AF-A0A7K3IZ13-F1-model_v4 Tetrathionate reductase 0.948 72 214 GO:0046872
GO:0051539
AF-A0A3D3SGS8-F1-model_v4 deleted 0.9454 72 216

Map