F149486

General Info

Members Datasets Scaffolds Average Seq Length
131 104 120 377

Family's Representative Sequence

Representative Sequence 3300025986|Ga0207658_10146586|Ga0207658_101465863
Length 417
Sequence LTPETYVYIRIFIVVNYKKPFILKIFEAKDSMTITSENLTTTTHTRLYGLDHLRALAITFVFIYHYGHVFPSPEWITGISKFGWTGVDLFFVLSGYLISSQLFAIIAKGKNISFKTFFIKRFFRIIPAYLLVVAIYFCFPASRERSAPAPLWKYLSFTQNIGLDLRTQGTFSHAWSLCIEEQFYLLLPLTLIALVYAKAIKKGIALLVTLFVLGMAARWYIYDNVVLARFNEENSWINWYKWIYYPTYGRLDGLLTGVGIGALFQFRPMIKEKLTGYGNLLLAGSLVVLTVAYFLCINEDSFNASVFGFPLVSIGYGFLLMGAISPNCFLYRFKSGITSRLAVLSYAVYLTHKIIIHLIQGQSDKLNIAKNGVWMFLICTIACVAAAYCMNFLIEKPFLKWRDKILNTRLQESTANK

Samples

Sample ID Description Type Environment
1 2643221667 Flavobacterium sp. Root420 Isolate Unclassified
2 2738541279 Flavobacterium sp. GV069 Isolate Unclassified
3 2738541285 Flavobacterium sp. GV030 Isolate Unclassified
4 2738543007 Flavobacterium sp. GV063 Isolate Unclassified
5 2818991460 Chitinophaga polysaccharea 1209 Isolate Unclassified
6 2842083920 Chryseobacterium lathyri KCTC 22544 Isolate Rhizosphere
7 2857618242 Flavobacterium sp. R-74482 Isolate Unclassified
8 2884791551 Chitinophaga oryzae 1310 Isolate Unclassified
9 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
10 2945977869 Chitinophaga sp. W2I13 Isolate Rhizosphere
11 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere
12 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
13 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
14 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
15 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
16 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
17 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
18 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
19 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
20 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
21 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
22 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
25 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
26 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
27 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
28 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
29 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
30 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
31 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
32 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
35 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
36 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
37 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
38 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
40 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
41 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
42 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
43 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
44 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
45 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
46 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
47 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
48 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
49 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
50 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
51 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
52 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
53 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
54 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
55 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
56 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
57 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
75 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
76 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
77 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
78 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
79 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
80 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
81 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
82 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
83 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
84 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
85 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
86 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
87 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
88 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
89 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
90 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
91 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
92 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
93 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
94 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
95 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
96 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
97 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
98 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
99 3300049763 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control Metagenome Rhizosphere
100 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
101 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
102 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
103 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
104 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 91.6
Metatranscriptomes 0
Isolates 8.4

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.87
Nodule 0
Rhizoplane 0.76
Rhizosphere 77.1
Stem 0
Stem Tuber 0
Unclassified 15.27

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25159J45721_1009220 3300002987 Unclassified 2624
2 rootH2_10121850 3300003320 Bacteria 9549
3 rootL2_10131681 3300003322 Bacteria 3919
4 rootH1_10007688 3300003323 Bacteria 27506
5 rootH1_10027491 3300003323 Bacteria 5089
6 rootH1_10332282 3300003323 Unclassified 3073
7 rootH1_10382015 3300003323 Unclassified 1823
8 JGI25160J50197_1002526 3300003354 Bacteria 8479
9 Ga0065714_10004855 3300005288 Bacteria 6638
10 Ga0068869_100009712 3300005334 Bacteria 6249
11 Ga0070661_100141376 3300005344 Bacteria 1814
12 Ga0070671_100127413 3300005355 Bacteria 2144
13 Ga0070667_100038650 3300005367 Unclassified 4001
14 Ga0068853_100002341 3300005539 Bacteria 14167
15 Ga0068855_100011992 3300005563 Bacteria 10478
16 Ga0068857_100047268 3300005577 Bacteria 3820
17 Ga0068856_100023999 3300005614 Bacteria 5932
18 Ga0068852_100066631 3300005616 Bacteria 3145
19 Ga0068859_100000037 3300005617 Bacteria 165480
20 Ga0068851_10016091 3300005834 Bacteria 3574
21 Ga0068863_100002618 3300005841 Bacteria 17840
22 Ga0068858_100018293 3300005842 Bacteria 6561
23 Ga0068860_100013203 3300005843 Bacteria 8103
24 Ga0097621_100090977 3300006237 Bacteria 2554
25 Ga0097620_100000037 3300006931 Bacteria 165480
26 Ga0105244_10000010 3300009036 Bacteria 265799
27 Ga0105240_10000011 3300009093 Bacteria 523646
28 Ga0105240_10002165 3300009093 Bacteria 32084
29 Ga0105240_10003110 3300009093 Bacteria 26112
30 Ga0105240_10138246 3300009093 Bacteria 2915
31 Ga0105240_10261024 3300009093 Bacteria 1998
32 Ga0105245_10106906 3300009098 Bacteria 2597
33 Ga0105247_10116525 3300009101 Bacteria 1726
34 Ga0114129_10032882 3300009147 Bacteria 7329
35 Ga0105241_10000159 3300009174 Bacteria 49102
36 Ga0105237_10001973 3300009545 Bacteria 26110
37 Ga0105237_10041727 3300009545 Bacteria 4627
38 Ga0105237_10282549 3300009545 Bacteria 1662
39 Ga0105238_10052044 3300009551 Bacteria 4117
40 Ga0105249_10001713 3300009553 Bacteria 19174
41 Ga0105239_10000873 3300010375 Bacteria 42895
42 Ga0105239_10003411 3300010375 Bacteria 19482
43 Ga0105239_10012803 3300010375 Bacteria 9332
44 Ga0105239_10013071 3300010375 Bacteria 9226
45 Ga0105239_10083397 3300010375 Bacteria 3520
46 Ga0105246_10017495 3300011119 Bacteria 4557
47 Ga0157378_10007326 3300013297 Bacteria 9636
48 Ga0163162_10003204 3300013306 Bacteria 15653
49 Ga0157372_10026676 3300013307 Bacteria 6287
50 Ga0157372_10115734 3300013307 Bacteria 3074
51 Ga0157372_10135028 3300013307 Unclassified 2841
52 Ga0157372_10161225 3300013307 Bacteria 2592
53 Ga0157375_10025764 3300013308 Bacteria 5471
54 Ga0163163_10189733 3300014325 Bacteria 2104
55 Ga0157379_10154051 3300014968 Bacteria 2073
56 Ga0157376_10077068 3300014969 Bacteria 2851
57 Ga0182007_10009987 3300015262 Bacteria 3781
58 Ga0163161_10000043 3300017792 Bacteria 135014
59 Ga0163161_10060665 3300017792 Bacteria 2753
60 Ga0163161_10254851 3300017792 Bacteria 1369
61 Ga0209436_100347 3300025208 Bacteria 20952
62 Ga0209130_1003083 3300025284 Bacteria 7457
63 Ga0207426_1000032 3300025302 Bacteria 457997
64 Ga0207426_1000148 3300025302 Bacteria 190030
65 Ga0207655_1000200 3300025728 Bacteria 104540
66 Ga0207710_10064186 3300025900 Bacteria 1672
67 Ga0207695_10000010 3300025913 Bacteria 981919
68 Ga0207695_10000962 3300025913 Bacteria 51331
69 Ga0207695_10003781 3300025913 Bacteria 21001
70 Ga0207695_10093527 3300025913 Bacteria 3015
71 Ga0207671_10002513 3300025914 Bacteria 19573
72 Ga0207649_10042602 3300025920 Bacteria 2770
73 Ga0207687_10206543 3300025927 Bacteria 1538
74 Ga0207689_10004234 3300025942 Bacteria 13052
75 Ga0207667_10009979 3300025949 Bacteria 11139
76 Ga0207658_10146586 3300025986 Bacteria 1918
77 Ga0207703_10003126 3300026035 Bacteria 13978
78 Ga0207639_10007654 3300026041 Bacteria 7372
79 Ga0207702_10114281 3300026078 Bacteria 2406
80 Ga0207641_10000226 3300026088 Bacteria 72539
81 Ga0207676_10013461 3300026095 Bacteria 5876
82 Ga0207674_10061905 3300026116 Bacteria 3780
83 Ga0207698_10085140 3300026142 Bacteria 2565
84 Ga0268264_10009695 3300028381 Bacteria 7975
85 Ga0307515_10033808 3300028794 Bacteria 8403
86 Ga0265327_10032475 3300031251 Unclassified 2921
87 Ga0265327_10096043 3300031251 Bacteria 1438
88 Ga0307509_10000016 3300031507 Bacteria 266991
89 Ga0307509_10051919 3300031507 Unclassified 4379
90 Ga0307509_10123945 3300031507 Bacteria 2555
91 Ga0307413_10001965 3300031824 Bacteria 8153
92 Ga0307410_10000006 3300031852 Bacteria 100089
93 Ga0307411_10000010 3300032005 Bacteria 238134
94 Ga0307510_10068564 3300033180 Bacteria 3558
95 Ga0395900_0163638 3300037418 Bacteria 2268
96 Ga0395905_0010997 3300037471 Bacteria 8757
97 Ga0395905_0052053 3300037471 Bacteria 3834
98 Ga0395905_0085329 3300037471 Bacteria 2959
99 Ga0439447_000066 3300041407 Bacteria 36978
100 Ga0466969_0000366 3300044656 Bacteria 24782
101 Ga0466966_0000351 3300044684 Bacteria 29889
102 Ga0453684_0003344 3300044712 Bacteria 36364
103 Ga0466968_0029181 3300044735 Unclassified 2280
104 Ga0466957_0003093 3300044842 Bacteria 9056
105 Ga0495627_002880 3300046453 Bacteria 7929
106 Ga0495606_0009432 3300046507 Bacteria 8261
107 Ga0495610_0000009 3300046512 Bacteria 554843
108 Ga0495643_0000794 3300046522 Bacteria 34957
109 Ga0495633_0000147 3300046558 Bacteria 94306
110 Ga0495656_0040873 3300046615 Bacteria 1934
111 Ga0495625_0113367 3300046660 Bacteria 1852
112 Ga0495636_0031860 3300047318 Bacteria 2162
113 Ga0496109_0305485 3300048912 Bacteria 1501
114 Ga0496122_0003663 3300048925 Bacteria 19947
115 Ga0501266_000009 3300049763 Bacteria 233584
116 Ga0501280_005627 3300049776 Bacteria 1789
117 nmdc:mga0k408_45074_c1 3300050493 Bacteria 2544
118 nmdc:mga05p37_31776_c1 3300050507 Bacteria 6451
119 Ga0500641_0000093 3300053096 Bacteria 34372
120 Ga0500658_0000006 3300053134 Bacteria 290380

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300047318 Ga0495636_0031860 Ga0495636_0031860_32_943 303
2 3300046660 Ga0495625_0113367 Ga0495625_0113367_395_1498 318
3 3300025728 Ga0207655_1000200 Ga0207655_10002003 334
4 3300009036 Ga0105244_10000010 Ga0105244_10000010100 339
5 3300031251 Ga0265327_10032475 Ga0265327_100324751 342
6 3300009147 Ga0114129_10032882 Ga0114129_100328823 344
7 3300050493 nmdc:mga0k408_45074_c1 nmdc:mga0k408_45074_c1_1098_2192 344
8 3300050507 nmdc:mga05p37_31776_c1 nmdc:mga05p37_31776_c1_3764_4861 344
9 3300046522 Ga0495643_0000794 Ga0495643_0000794_16180_17283 352
10 3300005288 Ga0065714_10004855 Ga0065714_100048558 353
11 3300037418 Ga0395900_0163638 Ga0395900_0163638_1091_2185 354
12 3300003323 rootH1_10382015 rootH1_103820152 355
13 3300009093 Ga0105240_10000011 Ga0105240_10000011418 360
14 3300009545 Ga0105237_10282549 Ga0105237_102825492 360
15 3300010375 Ga0105239_10000873 Ga0105239_1000087331 360
16 3300025913 Ga0207695_10000010 Ga0207695_10000010808 360
17 3300031852 Ga0307410_10000006 Ga0307410_1000000683 360
18 3300041407 Ga0439447_000066 Ga0439447_000066_25793_26917 360
19 3300049776 Ga0501280_005627 Ga0501280_005627_391_1515 360
20 3300053134 Ga0500658_0000006 Ga0500658_0000006_147287_148411 360
21 iso_pu_bacteria 2738541279 2738733477 360
22 iso_pu_bacteria 2738541285 2738766015 360
23 iso_pu_bacteria 2738543007 2739215058 360
24 3300031824 Ga0307413_10001965 Ga0307413_100019658 361
25 3300032005 Ga0307411_10000010 Ga0307411_10000010120 361
26 3300049763 Ga0501266_000009 Ga0501266_000009_140077_141201 361
27 iso_pu_bacteria 2643221667 2644373374 362
28 3300013307 Ga0157372_10026676 Ga0157372_100266764 363
29 3300044842 Ga0466957_0003093 Ga0466957_0003093_5293_6408 363
30 3300017792 Ga0163161_10000043 Ga0163161_10000043118 364
31 3300005563 Ga0068855_100011992 Ga0068855_1000119929 366
32 3300009093 Ga0105240_10261024 Ga0105240_102610242 366
33 3300014968 Ga0157379_10154051 Ga0157379_101540511 366
34 3300025913 Ga0207695_10093527 Ga0207695_100935274 366
35 3300025949 Ga0207667_10009979 Ga0207667_100099794 366
36 3300046615 Ga0495656_0040873 Ga0495656_0040873_33_1142 366
37 3300031251 Ga0265327_10096043 Ga0265327_100960431 367
38 3300028794 Ga0307515_10033808 Ga0307515_100338083 368
39 3300033180 Ga0307510_10068564 Ga0307510_100685641 368
40 3300044712 Ga0453684_0003344 Ga0453684_0003344_14462_15574 368
41 iso_pu_bacteria 2857618242 2857621181 368
42 3300031507 Ga0307509_10000016 Ga0307509_10000016120 369
43 3300044656 Ga0466969_0000366 Ga0466969_0000366_2518_3636 369
44 3300044684 Ga0466966_0000351 Ga0466966_0000351_25056_26174 369
45 3300005577 Ga0068857_100047268 Ga0068857_1000472684 371
46 3300026116 Ga0207674_10061905 Ga0207674_100619054 371
47 iso_pu_bacteria 2842083920 2842084881 371
48 3300046453 Ga0495627_002880 Ga0495627_002880_6433_7560 372
49 3300046558 Ga0495633_0000147 Ga0495633_0000147_9578_10705 372
50 3300048925 Ga0496122_0003663 Ga0496122_0003663_18407_19528 372
51 3300017792 Ga0163161_10060665 Ga0163161_100606652 374
52 3300046507 Ga0495606_0009432 Ga0495606_0009432_2985_4124 374
53 3300046512 Ga0495610_0000009 Ga0495610_0000009_308129_309259 374
54 3300013307 Ga0157372_10161225 Ga0157372_101612252 375
55 3300005344 Ga0070661_100141376 Ga0070661_1001413762 376
56 3300025920 Ga0207649_10042602 Ga0207649_100426022 376
57 3300003323 rootH1_10332282 rootH1_103322822 377
58 3300005539 Ga0068853_100002341 Ga0068853_10000234110 377
59 3300005614 Ga0068856_100023999 Ga0068856_1000239995 377
60 3300009093 Ga0105240_10003110 Ga0105240_1000311011 377
61 3300009093 Ga0105240_10138246 Ga0105240_101382461 377
62 3300009545 Ga0105237_10041727 Ga0105237_100417274 377
63 3300009551 Ga0105238_10052044 Ga0105238_100520443 377
64 3300010375 Ga0105239_10013071 Ga0105239_1001307112 377
65 3300013307 Ga0157372_10135028 Ga0157372_101350283 377
66 3300015262 Ga0182007_10009987 Ga0182007_100099872 377
67 3300025913 Ga0207695_10003781 Ga0207695_1000378110 377
68 3300026041 Ga0207639_10007654 Ga0207639_100076545 377
69 3300026078 Ga0207702_10114281 Ga0207702_101142812 377
70 3300009093 Ga0105240_10002165 Ga0105240_1000216516 379
71 3300025913 Ga0207695_10000962 Ga0207695_1000096226 379
72 3300013297 Ga0157378_10007326 Ga0157378_100073264 380
73 3300017792 Ga0163161_10254851 Ga0163161_102548512 380
74 3300048912 Ga0496109_0305485 Ga0496109_0305485_74_1243 380
75 3300003322 rootL2_10131681 rootL2_101316811 381
76 3300005334 Ga0068869_100009712 Ga0068869_1000097124 381
77 3300005355 Ga0070671_100127413 Ga0070671_1001274132 381
78 3300005367 Ga0070667_100038650 Ga0070667_1000386505 381
79 3300005616 Ga0068852_100066631 Ga0068852_1000666314 381
80 3300005617 Ga0068859_100000037 Ga0068859_10000003744 381
81 3300005834 Ga0068851_10016091 Ga0068851_100160912 381
82 3300005841 Ga0068863_100002618 Ga0068863_10000261811 381
83 3300005842 Ga0068858_100018293 Ga0068858_1000182935 381
84 3300005843 Ga0068860_100013203 Ga0068860_1000132035 381
85 3300006931 Ga0097620_100000037 Ga0097620_10000003744 381
86 3300009098 Ga0105245_10106906 Ga0105245_101069062 381
87 3300009101 Ga0105247_10116525 Ga0105247_101165251 381
88 3300009174 Ga0105241_10000159 Ga0105241_100001592 381
89 3300009545 Ga0105237_10001973 Ga0105237_1000197312 381
90 3300009553 Ga0105249_10001713 Ga0105249_100017139 381
91 3300010375 Ga0105239_10083397 Ga0105239_100833973 381
92 3300011119 Ga0105246_10017495 Ga0105246_100174955 381
93 3300013306 Ga0163162_10003204 Ga0163162_100032044 381
94 3300013308 Ga0157375_10025764 Ga0157375_100257644 381
95 3300014325 Ga0163163_10189733 Ga0163163_101897332 381
96 3300014969 Ga0157376_10077068 Ga0157376_100770682 381
97 3300025900 Ga0207710_10064186 Ga0207710_100641862 381
98 3300025914 Ga0207671_10002513 Ga0207671_100025139 381
99 3300025927 Ga0207687_10206543 Ga0207687_102065432 381
100 3300025942 Ga0207689_10004234 Ga0207689_100042345 381
101 3300026035 Ga0207703_10003126 Ga0207703_1000312610 381
102 3300026088 Ga0207641_10000226 Ga0207641_100002268 381
103 3300026095 Ga0207676_10013461 Ga0207676_100134614 381
104 3300026142 Ga0207698_10085140 Ga0207698_100851402 381
105 3300028381 Ga0268264_10009695 Ga0268264_100096955 381
106 3300006237 Ga0097621_100090977 Ga0097621_1000909771 382
107 3300025986 Ga0207658_10146586 Ga0207658_101465863 382
108 3300044735 Ga0466968_0029181 Ga0466968_0029181_763_1920 382
109 3300031507 Ga0307509_10051919 Ga0307509_100519193 383
110 3300031507 Ga0307509_10123945 Ga0307509_101239452 383
111 iso_pu_bacteria 2929177148 2929181297 383
112 iso_pu_bacteria 2945977869 2945983698 383
113 iso_pu_bacteria 2946013367 2946016892 383
114 3300010375 Ga0105239_10003411 Ga0105239_100034116 384
115 3300013307 Ga0157372_10115734 Ga0157372_101157342 384
116 3300053096 Ga0500641_0000093 Ga0500641_0000093_11082_12260 384
117 iso_pu_bacteria 2818991460 2819679680 384
118 iso_pu_bacteria 2884791551 2884793277 384
119 3300037471 Ga0395905_0010997 Ga0395905_0010997_6074_7246 386
120 3300037471 Ga0395905_0085329 Ga0395905_0085329_985_2157 386
121 3300003323 rootH1_10007688 rootH1_1000768814 387
122 3300003354 JGI25160J50197_1002526 JGI25160J50197_10025264 387
123 3300025302 Ga0207426_1000032 Ga0207426_100003235 387
124 3300003320 rootH2_10121850 rootH2_101218507 388
125 3300003323 rootH1_10027491 rootH1_100274913 388
126 3300010375 Ga0105239_10012803 Ga0105239_100128032 388
127 3300037471 Ga0395905_0052053 Ga0395905_0052053_2149_3348 389
128 3300002987 JGI25159J45721_1009220 JGI25159J45721_10092202 392
129 3300025208 Ga0209436_100347 Ga0209436_1003472 392
130 3300025284 Ga0209130_1003083 Ga0209130_10030834 392
131 3300025302 Ga0207426_1000148 Ga0207426_10001482 392

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01757

Acyl_transf_3

Acyltransferase family

47

392

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
3nc1-assembly1.cif.gz_A crystal structure of the crm1-rangtp complex 0.2474 181 366
6hfb-assembly3.cif.gz_C outward-facing conformation of a multidrug resistance mate family transporter of the mop superfamily. 0.2474 13 373
4oh3-assembly1.cif.gz_A crystal structure of a nitrate transporter 0.2414 210 378
6hfb-assembly3.cif.gz_C outward-facing conformation of a multidrug resistance mate family transporter of the mop superfamily. 0.2326 13 373
8t6b-assembly1.cif.gz_A human vmat2 in complex with serotonin 0.228 13 355
ID Description Score Start End Superfamily
af_A0A0R0GUC5_71_252_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.4357 215 355 1.20.1250.20
af_Q8IIV4_2_207_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.3558 172 355 1.20.1250.20
af_G5E8K6_233_441_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.3475 178 380 1.20.1250.20
af_G5EF35_288_482_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.3472 171 366 1.20.1250.20
af_Q9V3J5_45_549_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.345 212 353 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A1M7G4E4-F1-model_v4 Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains 0.989 12 373 GO:0009103
GO:0016020
GO:0016747
GO:0016787
AF-A0A0J7I6D3-F1-model_v4 Acyltransferase 0.9808 14 372 GO:0009103
GO:0016020
GO:0016747
AF-A0A7K1U0A5-F1-model_v4 Acyltransferase family protein 0.9785 9 369 GO:0009103
GO:0016020
GO:0016747
AF-A0A3C1BIZ7-F1-model_v4 Acyltransferase 0.9779 52 373 GO:0009103
GO:0016020
GO:0016747
AF-A0A1M6UR02-F1-model_v4 Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains 0.9746 8 376 GO:0009103
GO:0016020
GO:0016747
GO:0016787

Feature Viewer

pLDDT pTM Quality
87.84 0.88 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map