F149088

General Info

Members Datasets Scaffolds Average Seq Length
131 98 262 331

Family's Representative Sequence

Representative Sequence 3300009176|Ga0105242_10346836|Ga0105242_103468362
Length 343
Sequence LRATSASVRACRAVKSPSGYRLGIINPLTLVGNEIKTILRDRAFPFDRIALLDSAGEAAGALTDIGDEPAVVAPITDIELEDLDLVFFCGPPATNRPWIERQRADDFVVIDVSQPTSIEEGKLAVAGINLESIDATDKLIVSPHPVTIPLALILHQIATVSPVEICTATVVQPASEFEQAGVEELAKQTISVLNIQSVPQEVFDRQLAFNLYPAAEHNEEFIVAQVKALTDPRTQLALQVTQGTIFHSHTFSLFVKTQSELTREQVLDALRSSPAIALPEGDQAFGTIDAAGKDEVLIAEVRPDPSIRGGFWVWAVCDNLRRSSALNAVLVAEKVLFGSGVTN

Samples

Sample ID Description Type Environment
1 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
13 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
14 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
15 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
18 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
19 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
20 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
21 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
22 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
23 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
24 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
25 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
26 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
27 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
28 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
29 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
30 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
31 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
32 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
33 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
34 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
35 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
36 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
37 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
38 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
39 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
41 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
43 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
44 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
45 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
46 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
47 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
48 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
49 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
50 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
51 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
52 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
53 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
54 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
55 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
80 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
81 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
82 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
83 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
84 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
85 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
86 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
87 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
88 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
89 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
90 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
91 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
92 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
93 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
94 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
95 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
96 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
97 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
98 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 94.66
Stem 0
Stem Tuber 0
Unclassified 9.92

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105242_10346836 3300009176 Bacteria 1370
2 Ga0070658_10251873 3300005327 Bacteria 1498
3 Ga0070683_100000038 3300005329 Bacteria 120641
4 Ga0070670_100001364 3300005331 Bacteria 19569
5 Ga0070670_100199013 3300005331 Unclassified 1740
6 Ga0070677_10105372 3300005333 Bacteria 1250
7 Ga0068869_100025328 3300005334 Bacteria 4118
8 Ga0068869_100028896 3300005334 Bacteria 3879
9 Ga0070680_100040675 3300005336 Bacteria 3766
10 Ga0070682_100000003 3300005337 Bacteria 469319
11 Ga0068868_100000088 3300005338 Bacteria 56398
12 Ga0068868_100001822 3300005338 Bacteria 14654
13 Ga0070692_10058202 3300005345 Bacteria 2029
14 Ga0070675_100000038 3300005354 Bacteria 84939
15 Ga0070673_100098620 3300005364 Bacteria 2402
16 Ga0070709_10169833 3300005434 Bacteria 1523
17 Ga0070701_10020646 3300005438 Bacteria 3130
18 Ga0070708_100109660 3300005445 Bacteria 2536
19 Ga0070681_10448351 3300005458 Unclassified 1202
20 Ga0070685_10025115 3300005466 Bacteria 3280
21 Ga0070706_100022537 3300005467 Bacteria 5797
22 Ga0070706_100303088 3300005467 Bacteria 1490
23 Ga0070707_100030464 3300005468 Bacteria 5137
24 Ga0070698_100150104 3300005471 Bacteria 2278
25 Ga0070698_100162692 3300005471 Unclassified 2175
26 Ga0070698_100281636 3300005471 Bacteria 1594
27 Ga0070697_100015672 3300005536 Bacteria 5952
28 Ga0068853_100076967 3300005539 Unclassified 2914
29 Ga0070672_100001160 3300005543 Bacteria 16105
30 Ga0070693_100200256 3300005547 Bacteria 1296
31 Ga0068857_100038332 3300005577 Bacteria 4245
32 Ga0070702_100161189 3300005615 Bacteria 1450
33 Ga0070702_100213436 3300005615 Unclassified 1286
34 Ga0068864_100000059 3300005618 Bacteria 125184
35 Ga0068861_100137010 3300005719 Bacteria 1993
36 Ga0068858_100000320 3300005842 Bacteria 50732
37 Ga0070717_10000048 3300006028 Bacteria 104474
38 Ga0097621_100226739 3300006237 Unclassified 1630
39 Ga0075428_100006469 3300006844 Bacteria 13031
40 Ga0075431_100005378 3300006847 Bacteria 12640
41 Ga0075434_100171850 3300006871 Bacteria 2187
42 Ga0075429_100186212 3300006880 Bacteria 1819
43 Ga0075436_100026816 3300006914 Bacteria 3967
44 Ga0075435_100000512 3300007076 Bacteria 23675
45 Ga0075435_100212088 3300007076 Bacteria 1643
46 Ga0075435_100357658 3300007076 Bacteria 1252
47 Ga0105240_10099016 3300009093 Bacteria 3549
48 Ga0111539_10000088 3300009094 Bacteria 95177
49 Ga0105245_10004093 3300009098 Bacteria 12945
50 Ga0105245_10004873 3300009098 Bacteria 11812
51 Ga0114129_10081112 3300009147 Bacteria 4509
52 Ga0114129_10217128 3300009147 Bacteria 2582
53 Ga0105242_10001720 3300009176 Bacteria 17280
54 Ga0105238_10000002 3300009551 Bacteria 772711
55 Ga0105239_10012270 3300010375 Bacteria 9545
56 Ga0157369_10000289 3300013105 Bacteria 67235
57 Ga0157374_10000005 3300013296 Bacteria 646767
58 Ga0157378_10000194 3300013297 Bacteria 58958
59 Ga0157378_10000863 3300013297 Bacteria 28088
60 Ga0163162_10014442 3300013306 Bacteria 7715
61 Ga0157375_10000011 3300013308 Bacteria 334557
62 Ga0157375_10000031 3300013308 Bacteria 195209
63 Ga0157375_10000999 3300013308 Bacteria 24429
64 Ga0163163_10061312 3300014325 Bacteria 3726
65 Ga0157380_10004825 3300014326 Bacteria 9397
66 Ga0157377_10000001 3300014745 Bacteria 623098
67 Ga0157377_10000389 3300014745 Bacteria 19070
68 Ga0157376_10000011 3300014969 Bacteria 307434
69 Ga0213873_10000004 3300021358 Bacteria 774374
70 Ga0213873_10001775 3300021358 Bacteria 3632
71 Ga0213876_10000007 3300021384 Bacteria 670340
72 Ga0213876_10000009 3300021384 Bacteria 496136
73 Ga0213876_10103625 3300021384 Bacteria 1509
74 Ga0207699_10174994 3300025906 Bacteria 1439
75 Ga0207645_10251069 3300025907 Unclassified 1170
76 Ga0207643_10046125 3300025908 Bacteria 2463
77 Ga0207707_10295277 3300025912 Unclassified 1402
78 Ga0207695_10040527 3300025913 Bacteria 4991
79 Ga0207646_10023823 3300025922 Bacteria 5618
80 Ga0207694_10000001 3300025924 Bacteria 4078485
81 Ga0207650_10000021 3300025925 Bacteria 322394
82 Ga0207650_10010618 3300025925 Bacteria 6324
83 Ga0207659_10000009 3300025926 Bacteria 308304
84 Ga0207687_10002861 3300025927 Bacteria 11714
85 Ga0207687_10020538 3300025927 Bacteria 4382
86 Ga0207686_10001779 3300025934 Bacteria 11987
87 Ga0207665_10039735 3300025939 Bacteria 3137
88 Ga0207665_10073780 3300025939 Bacteria 2334
89 Ga0207665_10090903 3300025939 Bacteria 2116
90 Ga0207691_10002888 3300025940 Bacteria 16751
91 Ga0207689_10006699 3300025942 Bacteria 10162
92 Ga0207661_10000006 3300025944 Bacteria 537727
93 Ga0207651_10108433 3300025960 Bacteria 2078
94 Ga0207640_10003479 3300025981 Bacteria 8481
95 Ga0207677_10000006 3300026023 Bacteria 283855
96 Ga0207677_10000172 3300026023 Bacteria 50966
97 Ga0207703_10000004 3300026035 Bacteria 526312
98 Ga0207639_10000015 3300026041 Bacteria 265362
99 Ga0207639_10059375 3300026041 Unclassified 2946
100 Ga0207648_10415658 3300026089 Bacteria 1220
101 Ga0207676_10000007 3300026095 Bacteria 591074
102 Ga0207674_10016411 3300026116 Bacteria 8107
103 Ga0207675_100130932 3300026118 Bacteria 2379
104 Ga0207428_10000148 3300027907 Bacteria 95185
105 Ga0307416_100110486 3300032002 Bacteria 2421
106 Ga0373940_0062125 3300035088 Unclassified 1071
107 Ga0373932_0002339 3300035112 Bacteria 4813
108 Ga0436365_0379659 3300039437 Bacteria 116274
109 Ga0436365_0394061 3300039437 Bacteria 142715
110 Ga0436365_1291435 3300039437 Bacteria 7919
111 Ga0436362_0290430 3300039453 Bacteria 772596
112 Ga0436362_1114911 3300039453 Bacteria 4700
113 Ga0451839_0564361 3300041496 Bacteria 3235
114 Ga0451577_0198331 3300042876 Unclassified 1812
115 Ga0495620_0001645 3300046515 Bacteria 13224
116 Ga0495588_0094239 3300046674 Bacteria 1570
117 Ga0501073_0021801 3300049589 Bacteria 4615
118 Ga0501080_0053653 3300049742 Bacteria 3754
119 nmdc:mga05p37_153092_c1 3300050507 Unclassified 2819
120 nmdc:mga05p37_178962_c1 3300050507 Bacteria 2581
121 nmdc:mga09592_159517_c1 3300050508 Bacteria 1948
122 nmdc:mga09592_208440_c1 3300050508 Bacteria 1693
123 nmdc:mga06r32_12606_c1 3300050510 Bacteria 7637
124 nmdc:mga08y16_41_c1 3300050511 Bacteria 128981
125 nmdc:mga0n895_183928_c1 3300050512 Bacteria 2121
126 nmdc:mga0rr50_31222_c1 3300050513 Bacteria 3781
127 nmdc:mga0rr50_80_c1 3300050513 Bacteria 53811
128 nmdc:mga0rr50_97427_c1 3300050513 Unclassified 2303
129 nmdc:mga08x19_8865_c1 3300050514 Bacteria 6001
130 Ga0495655_0000149 3300053083 Bacteria 13096
131 Ga0495655_0005553 3300053083 Bacteria 2236
132 Ga0105242_10346836
133 Ga0070658_10251873
134 Ga0070683_100000038
135 Ga0070670_100001364
136 Ga0070670_100199013
137 Ga0070677_10105372
138 Ga0068869_100025328
139 Ga0068869_100028896
140 Ga0070680_100040675
141 Ga0070682_100000003
142 Ga0068868_100000088
143 Ga0068868_100001822
144 Ga0070692_10058202
145 Ga0070675_100000038
146 Ga0070673_100098620
147 Ga0070709_10169833
148 Ga0070701_10020646
149 Ga0070708_100109660
150 Ga0070681_10448351
151 Ga0070685_10025115
152 Ga0070706_100022537
153 Ga0070706_100303088
154 Ga0070707_100030464
155 Ga0070698_100150104
156 Ga0070698_100162692
157 Ga0070698_100281636
158 Ga0070697_100015672
159 Ga0068853_100076967
160 Ga0070672_100001160
161 Ga0070693_100200256
162 Ga0068857_100038332
163 Ga0070702_100161189
164 Ga0070702_100213436
165 Ga0068864_100000059
166 Ga0068861_100137010
167 Ga0068858_100000320
168 Ga0070717_10000048
169 Ga0097621_100226739
170 Ga0075428_100006469
171 Ga0075431_100005378
172 Ga0075434_100171850
173 Ga0075429_100186212
174 Ga0075436_100026816
175 Ga0075435_100000512
176 Ga0075435_100212088
177 Ga0075435_100357658
178 Ga0105240_10099016
179 Ga0111539_10000088
180 Ga0105245_10004093
181 Ga0105245_10004873
182 Ga0114129_10081112
183 Ga0114129_10217128
184 Ga0105242_10001720
185 Ga0105238_10000002
186 Ga0105239_10012270
187 Ga0157369_10000289
188 Ga0157374_10000005
189 Ga0157378_10000194
190 Ga0157378_10000863
191 Ga0163162_10014442
192 Ga0157375_10000011
193 Ga0157375_10000031
194 Ga0157375_10000999
195 Ga0163163_10061312
196 Ga0157380_10004825
197 Ga0157377_10000001
198 Ga0157377_10000389
199 Ga0157376_10000011
200 Ga0213873_10000004
201 Ga0213873_10001775
202 Ga0213876_10000007
203 Ga0213876_10000009
204 Ga0213876_10103625
205 Ga0207699_10174994
206 Ga0207645_10251069
207 Ga0207643_10046125
208 Ga0207707_10295277
209 Ga0207695_10040527
210 Ga0207646_10023823
211 Ga0207694_10000001
212 Ga0207650_10000021
213 Ga0207650_10010618
214 Ga0207659_10000009
215 Ga0207687_10002861
216 Ga0207687_10020538
217 Ga0207686_10001779
218 Ga0207665_10039735
219 Ga0207665_10073780
220 Ga0207665_10090903
221 Ga0207691_10002888
222 Ga0207689_10006699
223 Ga0207661_10000006
224 Ga0207651_10108433
225 Ga0207640_10003479
226 Ga0207677_10000006
227 Ga0207677_10000172
228 Ga0207703_10000004
229 Ga0207639_10000015
230 Ga0207639_10059375
231 Ga0207648_10415658
232 Ga0207676_10000007
233 Ga0207674_10016411
234 Ga0207675_100130932
235 Ga0207428_10000148
236 Ga0307416_100110486
237 Ga0373940_0062125
238 Ga0373932_0002339
239 Ga0436365_0379659
240 Ga0436365_0394061
241 Ga0436365_1291435
242 Ga0436362_0290430
243 Ga0436362_1114911
244 Ga0451839_0564361
245 Ga0451577_0198331
246 Ga0495620_0001645
247 Ga0495588_0094239
248 Ga0501073_0021801
249 Ga0501080_0053653
250 nmdc:mga05p37_153092_c1
251 nmdc:mga05p37_178962_c1
252 nmdc:mga09592_159517_c1
253 nmdc:mga09592_208440_c1
254 nmdc:mga06r32_12606_c1
255 nmdc:mga08y16_41_c1
256 nmdc:mga0n895_183928_c1
257 nmdc:mga0rr50_31222_c1
258 nmdc:mga0rr50_80_c1
259 nmdc:mga0rr50_97427_c1
260 nmdc:mga08x19_8865_c1
261 Ga0495655_0000149
262 Ga0495655_0005553

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02774

Semialdhyde_dhC

Semialdehyde dehydrogenase, dimerisation domain

155

322

0.88

PF01118

Semialdhyde_dh

Semialdehyde dehydrogenase, NAD binding domain

23

150

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
2qz9-assembly2.cif.gz_B-2 crystal structure of aspartate semialdehyde dehydrogenase ii from vibrio cholerae 0.8525 9 329
3pwk-assembly1.cif.gz_B crystal structure of aspartate beta-semialdehide dehydrogenase from streptococcus pneumoniae with 2',5'-adenosine diphosphate and d-2-aminoadipate 0.8456 9 324
2hjs-assembly1.cif.gz_A-2 the structure of a probable aspartate-semialdehyde dehydrogenase from pseudomonas aeruginosa 0.8455 9 326
2r00-assembly2.cif.gz_C-2 crystal structure of aspartate semialdehyde dehydrogenase ii complexed with asa from vibrio cholerae 0.8376 9 329
2yv3-assembly1.cif.gz_B crystal structure of aspartate semialdehyde dehydrogenase from thermus thermophilus hb8 0.8292 11 325
ID Description Score Start End Superfamily
2hjsA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8805 9 132 3.40.50.720
af_Q93Y73_42_261_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8751 14 149 3.40.50.720
af_P08390_5_140_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8694 10 139 3.40.50.720
af_Q2FYP0_5_212_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8662 14 147 3.40.50.720
af_Q93Y73_38_165_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8639 9 131 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A7V3BTX6-F1-model_v4 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) 0.926 11 149 GO:0004073
GO:0051287
AF-A0A4Q3W1J1-F1-model_v4 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) 0.9105 9 153 GO:0004073
GO:0051287
AF-A0A7C6WFH0-F1-model_v4 Aspartate-semialdehyde dehydrogenase 0.907 9 149 GO:0016620
GO:0051287
AF-A0A7C4AGA7-F1-model_v4 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) 0.9057 9 109 GO:0004073
GO:0051287
AF-A0A2V7W391-F1-model_v4 Semialdehyde dehydrogenase NAD-binding domain-containing protein 0.9042 1 326 GO:0008652
GO:0016620
GO:0046983
GO:0051287

Map