F148497

General Info

Members Datasets Scaffolds Average Seq Length
131 93 262 445

Family's Representative Sequence

Representative Sequence 3300005539|Ga0068853_100000516|Ga0068853_10000051612
Length 487
Sequence MTRPENCGPNAVTSGLPCSRRTFLHAGAAGLAMTAASYGRVLGANDRVGVGFIGYGLIGKRHVLDFQAQADVDCVGMCDAHSGRREEGRAQLGGTARAFADFRELLEHRDVDAVVVSTPDHWHALMTMMACAAGKDVYVEKPLSLFVREGRWMADTAARHNRVVQVGTQQRSGLHYQRARELIRDGHIGEVMSVRMQAYRNVMPGFGRPADGDSPAQLDWNRLLGPAPQRAYNPNRGIYHFRWFWDYSGGQMTNLGHHALDIMHWTLGGTPSAVTSVGGRWCLTDNGETPDTQDAFFEFTPPANNSPQTVAGQHANWTAVWSHREASGVGVKPYPTEFYGTRGMLGIDRKGFVVRADKKIPPENHVPRFTGAPPVGGVARVESSGEVEYWTSAIEDQSGSEAEQFTRHVRNFLDCVKSRDTPASDLESAHRVSTMCHLANLSLRLGRKLHWDAIREDVIGDPQASAQLVRPYRAPWDAELRTLLAAK

Samples

Sample ID Description Type Environment
1 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
2 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
5 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
6 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
7 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
8 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
9 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
10 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
11 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
12 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
13 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
14 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
15 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
16 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
17 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
18 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
19 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
20 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
21 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
22 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
23 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
24 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
25 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
26 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
27 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
28 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
29 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
42 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
43 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
44 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
45 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
46 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
47 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
48 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
49 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
50 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
51 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
52 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
53 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
54 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
55 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
56 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
57 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
58 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
59 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
60 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
61 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
62 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
63 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
64 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
65 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
66 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
67 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
68 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
69 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
70 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
71 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
72 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
73 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
74 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
75 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
76 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
77 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
78 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
79 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
80 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
81 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
82 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
83 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
84 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
85 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
86 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
87 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
88 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
89 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
90 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
91 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
92 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
93 2684623219 Planctomyces sp. SH-PL14 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.47
Metatranscriptomes 0.76
Isolates 0.76

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 97.71
Stem 0
Stem Tuber 0
Unclassified 8.4

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068853_100000516 3300005539 Bacteria 26192
2 Ga0058862_12706327 3300004803 Unclassified 1545
3 Ga0065712_10069370 3300005290 Bacteria 7435
4 Ga0070701_10017966 3300005438 Bacteria 3317
5 Ga0070708_100114440 3300005445 Bacteria 2482
6 Ga0070681_10026216 3300005458 Bacteria 5860
7 Ga0070706_100027170 3300005467 Bacteria 5266
8 Ga0070706_100055307 3300005467 Bacteria 3663
9 Ga0070707_100015925 3300005468 Bacteria 7058
10 Ga0070707_100093858 3300005468 Bacteria 2905
11 Ga0070698_100014316 3300005471 Bacteria 8382
12 Ga0070698_100185285 3300005471 Bacteria 2019
13 Ga0070699_100001750 3300005518 Bacteria 19820
14 Ga0070699_100004439 3300005518 Bacteria 12410
15 Ga0070697_100048023 3300005536 Bacteria 3461
16 Ga0070697_100057829 3300005536 Bacteria 3155
17 Ga0070697_100155655 3300005536 Bacteria 1929
18 Ga0070686_100002143 3300005544 Bacteria 10878
19 Ga0070696_100019382 3300005546 Bacteria 4607
20 Ga0070696_100035599 3300005546 Bacteria 3429
21 Ga0068862_100043295 3300005844 Bacteria 3838
22 Ga0070717_10070482 3300006028 Bacteria 2914
23 Ga0075428_100013813 3300006844 Bacteria 8992
24 Ga0075428_100028731 3300006844 Bacteria 6153
25 Ga0075430_100006718 3300006846 Bacteria 9704
26 Ga0075430_100040559 3300006846 Bacteria 3941
27 Ga0075431_100008510 3300006847 Bacteria 10274
28 Ga0075431_100027185 3300006847 Bacteria 5869
29 Ga0075431_100085504 3300006847 Bacteria 3256
30 Ga0105240_10020260 3300009093 Bacteria 8877
31 Ga0105240_10034985 3300009093 Bacteria 6477
32 Ga0105240_10119715 3300009093 Bacteria 3171
33 Ga0105240_10142553 3300009093 Bacteria 2863
34 Ga0105240_10273612 3300009093 Bacteria 1943
35 Ga0105245_10116391 3300009098 Bacteria 2492
36 Ga0114129_10230021 3300009147 Unclassified 2497
37 Ga0105248_10039537 3300009177 Bacteria 5284
38 Ga0105248_10112550 3300009177 Bacteria 3069
39 Ga0105237_10024720 3300009545 Bacteria 6145
40 Ga0105237_10196192 3300009545 Bacteria 2019
41 Ga0105238_10000086 3300009551 Bacteria 104933
42 Ga0105238_10157121 3300009551 Bacteria 2249
43 Ga0157369_10069675 3300013105 Unclassified 3778
44 Ga0157374_10098573 3300013296 Bacteria 2799
45 Ga0157378_10094344 3300013297 Bacteria 2725
46 Ga0163163_10043252 3300014325 Bacteria 4416
47 Ga0163163_10137962 3300014325 Bacteria 2480
48 Ga0207684_10031753 3300025910 Bacteria 4493
49 Ga0207707_10030047 3300025912 Bacteria 4751
50 Ga0207695_10002314 3300025913 Bacteria 28418
51 Ga0207695_10071562 3300025913 Bacteria 3541
52 Ga0207695_10152990 3300025913 Bacteria 2244
53 Ga0207652_10111231 3300025921 Bacteria 2429
54 Ga0207646_10001159 3300025922 Bacteria 33482
55 Ga0207646_10187811 3300025922 Bacteria 1866
56 Ga0207694_10001999 3300025924 Bacteria 16868
57 Ga0207665_10155982 3300025939 Bacteria 1638
58 Ga0207711_10046734 3300025941 Bacteria 3699
59 Ga0207712_10086841 3300025961 Unclassified 2292
60 Ga0207639_10000860 3300026041 Bacteria 20593
61 Ga0207641_10019960 3300026088 Bacteria 5501
62 Ga0268265_10118834 3300028380 Bacteria 2174
63 Ga0265325_10023825 3300031241 Bacteria 3336
64 Ga0316576_10014548 3300031727 Bacteria 5258
65 Ga0316577_10001289 3300031733 Bacteria 11703
66 Ga0373926_0003101 3300035083 Bacteria 5338
67 Ga0373927_0003874 3300035695 Bacteria 10609
68 Ga0373927_0004064 3300035695 Bacteria 10326
69 Ga0373933_0029222 3300035724 Bacteria 3186
70 Ga0373937_0007343 3300036401 Bacteria 9542
71 Ga0373937_0024907 3300036401 Bacteria 5401
72 Ga0316582_0004685 3300036647 Bacteria 6951
73 Ga0316582_0032011 3300036647 Bacteria 3219
74 Ga0316584_0006899 3300036712 Bacteria 7720
75 Ga0316584_0014039 3300036712 Bacteria 5688
76 Ga0395900_0190399 3300037418 Unclassified 2081
77 Ga0395905_0026016 3300037471 Bacteria 5518
78 Ga0436364_0356976 3300037853 Unclassified 2272
79 Ga0436365_1829414 3300039437 Bacteria 1942
80 Ga0436360_1312172 3300039438 Unclassified 1773
81 Ga0436362_0204296 3300039453 Bacteria 3573
82 Ga0439464_0026662 3300042439 Bacteria 1604
83 Ga0495580_0057163 3300046472 Bacteria 2746
84 Ga0495580_0139488 3300046472 Unclassified 1681
85 Ga0495580_0162931 3300046472 Bacteria 1543
86 Ga0495608_0137532 3300046511 Bacteria 1560
87 Ga0495618_0118992 3300046514 Bacteria 1692
88 Ga0495630_0072021 3300046517 Bacteria 2602
89 Ga0495645_0044448 3300046543 Unclassified 3239
90 Ga0495604_0081349 3300047317 Bacteria 2425
91 Ga0495674_0011060 3300047319 Bacteria 8521
92 Ga0495675_0010054 3300047444 Bacteria 5903
93 Ga0495675_0023666 3300047444 Bacteria 3915
94 Ga0495675_0052083 3300047444 Bacteria 2599
95 Ga0495684_0018812 3300047471 Bacteria 5322
96 Ga0495684_0172829 3300047471 Bacteria 1605
97 Ga0501032_0024316 3300049569 Unclassified 4184
98 Ga0501036_0004372 3300049572 Bacteria 11403
99 Ga0501038_0002803 3300049574 Bacteria 16230
100 Ga0501039_0011940 3300049575 Bacteria 6620
101 Ga0501043_0004990 3300049579 Bacteria 10736
102 Ga0501046_0000733 3300049580 Bacteria 31696
103 Ga0501048_0016266 3300049582 Bacteria 5483
104 Ga0501067_0005358 3300049583 Bacteria 7122
105 Ga0501068_0003675 3300049584 Bacteria 8300
106 Ga0501069_0001960 3300049585 Bacteria 10281
107 Ga0501070_0105589 3300049586 Bacteria 2328
108 Ga0501071_0147979 3300049587 Bacteria 1751
109 Ga0501072_0005592 3300049588 Bacteria 9564
110 Ga0501072_0095099 3300049588 Bacteria 2368
111 Ga0501073_0041764 3300049589 Bacteria 3239
112 Ga0501074_0063020 3300049590 Bacteria 2671
113 Ga0501074_0101204 3300049590 Bacteria 2062
114 Ga0501077_0021434 3300049593 Bacteria 4088
115 Ga0501249_002783 3300049679 Unclassified 3524
116 Ga0501079_0046311 3300049741 Bacteria 3356
117 Ga0501080_0000015 3300049742 Bacteria 98057
118 Ga0501045_0042076 3300049824 Bacteria 3326
119 nmdc:mga05p37_33617_c1 3300050507 Bacteria 6281
120 nmdc:mga05p37_432109_c1 3300050507 Bacteria 1529
121 nmdc:mga0qj67_25302_c1 3300050509 Bacteria 4585
122 nmdc:mga0qj67_33872_c1 3300050509 Bacteria 3987
123 nmdc:mga06r32_30469_c1 3300050510 Bacteria 5061
124 nmdc:mga08x19_16485_c1 3300050514 Bacteria 4507
125 Ga0495601_0002842 3300053077 Bacteria 9833
126 Ga0501084_0002217 3300054114 Bacteria 15594
127 Ga0501084_0021208 3300054114 Bacteria 5418
128 Ga0501084_0116632 3300054114 Bacteria 2245
129 Ga0501082_0001604 3300060353 Bacteria 19923
130 Ga0501082_0022642 3300060353 Bacteria 5411
131 2687239568 2684623219 Bacteria 8442773
132 Ga0068853_100000516
133 Ga0058862_12706327
134 Ga0065712_10069370
135 Ga0070701_10017966
136 Ga0070708_100114440
137 Ga0070681_10026216
138 Ga0070706_100027170
139 Ga0070706_100055307
140 Ga0070707_100015925
141 Ga0070707_100093858
142 Ga0070698_100014316
143 Ga0070698_100185285
144 Ga0070699_100001750
145 Ga0070699_100004439
146 Ga0070697_100048023
147 Ga0070697_100057829
148 Ga0070697_100155655
149 Ga0070686_100002143
150 Ga0070696_100019382
151 Ga0070696_100035599
152 Ga0068862_100043295
153 Ga0070717_10070482
154 Ga0075428_100013813
155 Ga0075428_100028731
156 Ga0075430_100006718
157 Ga0075430_100040559
158 Ga0075431_100008510
159 Ga0075431_100027185
160 Ga0075431_100085504
161 Ga0105240_10020260
162 Ga0105240_10034985
163 Ga0105240_10119715
164 Ga0105240_10142553
165 Ga0105240_10273612
166 Ga0105245_10116391
167 Ga0114129_10230021
168 Ga0105248_10039537
169 Ga0105248_10112550
170 Ga0105237_10024720
171 Ga0105237_10196192
172 Ga0105238_10000086
173 Ga0105238_10157121
174 Ga0157369_10069675
175 Ga0157374_10098573
176 Ga0157378_10094344
177 Ga0163163_10043252
178 Ga0163163_10137962
179 Ga0207684_10031753
180 Ga0207707_10030047
181 Ga0207695_10002314
182 Ga0207695_10071562
183 Ga0207695_10152990
184 Ga0207652_10111231
185 Ga0207646_10001159
186 Ga0207646_10187811
187 Ga0207694_10001999
188 Ga0207665_10155982
189 Ga0207711_10046734
190 Ga0207712_10086841
191 Ga0207639_10000860
192 Ga0207641_10019960
193 Ga0268265_10118834
194 Ga0265325_10023825
195 Ga0316576_10014548
196 Ga0316577_10001289
197 Ga0373926_0003101
198 Ga0373927_0003874
199 Ga0373927_0004064
200 Ga0373933_0029222
201 Ga0373937_0007343
202 Ga0373937_0024907
203 Ga0316582_0004685
204 Ga0316582_0032011
205 Ga0316584_0006899
206 Ga0316584_0014039
207 Ga0395900_0190399
208 Ga0395905_0026016
209 Ga0436364_0356976
210 Ga0436365_1829414
211 Ga0436360_1312172
212 Ga0436362_0204296
213 Ga0439464_0026662
214 Ga0495580_0057163
215 Ga0495580_0139488
216 Ga0495580_0162931
217 Ga0495608_0137532
218 Ga0495618_0118992
219 Ga0495630_0072021
220 Ga0495645_0044448
221 Ga0495604_0081349
222 Ga0495674_0011060
223 Ga0495675_0010054
224 Ga0495675_0023666
225 Ga0495675_0052083
226 Ga0495684_0018812
227 Ga0495684_0172829
228 Ga0501032_0024316
229 Ga0501036_0004372
230 Ga0501038_0002803
231 Ga0501039_0011940
232 Ga0501043_0004990
233 Ga0501046_0000733
234 Ga0501048_0016266
235 Ga0501067_0005358
236 Ga0501068_0003675
237 Ga0501069_0001960
238 Ga0501070_0105589
239 Ga0501071_0147979
240 Ga0501072_0005592
241 Ga0501072_0095099
242 Ga0501073_0041764
243 Ga0501074_0063020
244 Ga0501074_0101204
245 Ga0501077_0021434
246 Ga0501249_002783
247 Ga0501079_0046311
248 Ga0501080_0000015
249 Ga0501045_0042076
250 nmdc:mga05p37_33617_c1
251 nmdc:mga05p37_432109_c1
252 nmdc:mga0qj67_25302_c1
253 nmdc:mga0qj67_33872_c1
254 nmdc:mga06r32_30469_c1
255 nmdc:mga08x19_16485_c1
256 Ga0495601_0002842
257 Ga0501084_0002217
258 Ga0501084_0021208
259 Ga0501084_0116632
260 Ga0501082_0001604
261 Ga0501082_0022642
262 2687239568

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01408

GFO_IDH_MocA

Oxidoreductase family, NAD-binding Rossmann fold

48

168

0.97

PF19051

GFO_IDH_MocA_C2

Oxidoreductase family, C-terminal alpha/beta domain

391

478

0.94

PF19051

GFO_IDH_MocA_C2

Oxidoreductase family, C-terminal alpha/beta domain

158

278

0.92

PF22725

GFO_IDH_MocA_C3

GFO/IDH/MocA C-terminal domain

227

346

0.79

PF02894

GFO_IDH_MocA_C

Oxidoreductase family, C-terminal alpha/beta domain

180

450

0.74

Structural Annotation

Top 5 Hits

ID Description Score Start End
1zh8-assembly1.cif.gz_B crystal structure of oxidoreductase (tm0312) from thermotoga maritima at 2.50 a resolution 0.8699 33 417
3q2k-assembly1.cif.gz_E crystal structure of the wlba dehydrogenase from bordetella pertussis in complex with nadh and udp-glcnaca 0.8608 33 419
3q2k-assembly2.cif.gz_P crystal structure of the wlba dehydrogenase from bordetella pertussis in complex with nadh and udp-glcnaca 0.8545 33 419
1zh8-assembly1.cif.gz_B crystal structure of oxidoreductase (tm0312) from thermotoga maritima at 2.50 a resolution 0.8524 33 417
2glx-assembly1.cif.gz_A crystal structure analysis of bacterial 1,5-af reductase 0.8509 35 420
ID Description Score Start End Superfamily
af_P39353_1_125_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9501 34 153 3.40.50.720
3ezyC01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9482 34 153 3.40.50.720
4hktB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9449 34 153 3.40.50.720
af_P77503_10_129_3.30.360.10 Alpha Beta;2-Layer Sandwich;Dihydrodipicolinate Reductase; domain 2;Dihydrodipicolinate Reductase; domain 2 0.9405 34 152 3.30.360.10
3ezyC01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9405 34 153 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A3N5WRW0-F1-model_v4 Gfo/Idh/MocA family oxidoreductase 0.985 31 178 GO:0000166
AF-A0A257VN93-F1-model_v4 Oxidoreductase 0.974 31 153 GO:0000166
AF-A0A7C5YH46-F1-model_v4 Gfo/Idh/MocA family oxidoreductase 0.9629 32 171 GO:0000166
AF-A0A7V6D299-F1-model_v4 Gfo/Idh/MocA family oxidoreductase 0.9596 31 169 GO:0000166
AF-A0A7C4RIA3-F1-model_v4 Gfo/Idh/MocA family oxidoreductase 0.9585 32 152 GO:0000166

Map