F147153

General Info

Members Datasets Scaffolds Average Seq Length
130 97 111 900

Family's Representative Sequence

Representative Sequence 3300050493|nmdc:mga0k408_140_c2|nmdc:mga0k408_140_c2_24596_27493
Length 965
Sequence MKNSTLPVLKYLFVAIVLLFITQFARAQSDLKLWYKQPAKKWTDALPIGNGRLGAMIFGGVDEDRIQFNEQTLWTGGPRAYERQGAVKYLQPIRQLLFDGKQSEAEALAEKHFMGMKSNETTYAADSARWVEKMRNIKVKQVADFNESTTWKSIVLPTAQGWETTPGFEGLDGAVWLTTTFELPAKWKGKNLVLSLGRIRDLDITYINGNQVGTTSGTTYRKYIIPAKELHTGTNLIAIQVLNFNDKGGLTSAAKEMLLYPEGFEVTTIKGGVTSSDVTTAVDKKGSIIEPIKLSGTWKYRIQDDNPPAYPRYNADYQPFGDLYLQFPNQTISEYKRDLDITNATAHVTYKANGINYTREYLASAPGQVITIHLTADKPGSITVKALMRSLHKKFITRKVDDYTLALSLKVHDGVLRGVSYLHLHAVGGKVLVTPNNIKVTGANEATFYLTAATNFKNYHDVSGNPEAICKKQIAVIAHKSYPVVKADHIKDYQKYLKTFSLDLGKGMNADLPTDERILKLRDTPDPSFITLYTQYGRYLLISSSRPGNGPANLQGLWNDLLTPPWGSKFTTNINLQMNYWPAEVLNLSACSEPFFSIVDDLAKTGRQTAKEHYGAPGWVLHHNTDLWRGTDPVNASNHGIWVSGGAWLCHQLWEHYLYTKDKSFLQNRAYPEMKGAAEFFVHFLVKDPKTGYLISTPSNSPEHGGLVAGPAMDHQIIRDLFKNCIAASTLLGIDKDFADTLKAKYDQIAPNKIGKYGQLQEWMEDKDDTTDTHRHVSHMWGVFPGTDITWKTPDLMHAAQKSMLYRGDEGTGWSIAWKVNIWARMKQGDHAYLMFTKLLSPADVSSGKEKGGVYHNLFDAHPPFQIDGNFGGAAGLSEMLLQSQGDDIELLPALPSALPQGSIKGICARGGFELNFNWQNGQLQGVQVQSKMGGVCRLRYHDKTIIINTQKGGSYQFNADLKQL

Samples

Sample ID Description Type Environment
1 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
2 2721755487 Sphingobacterium sp. B29 Isolate Rhizosphere
3 2738543023 Pedobacter sp. OK628 Isolate Unclassified
4 2852627209 Pedobacter sp. AK017 Isolate Rhizosphere
5 2896317667 Sphingobacterium sp. SGR-19 Isolate Rhizosphere
6 2904780799 Sphingobacterium sp. 1304 Isolate Rhizosphere
7 2914759650 Rhizosphaericola mali Isolate Rhizosphere
8 2919177583 Sphingobacterium sp. 2149 Isolate Rhizosphere
9 2919186247 Pedobacter africanus 2697 Isolate Rhizosphere
10 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
11 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
12 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
13 2929154850 Filimonas sp. R-72421 Hybrid assembly Isolate Unclassified
14 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
15 2939664404 Pedobacter africanus 2990 Isolate Rhizosphere
16 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified
17 2995463766 Streptacidiphilus fuscans NEAU-YB345 Isolate Unclassified
18 3003233435 Sphingobacterium shayense CrR18 Isolate Unclassified
19 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
20 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
21 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
22 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
23 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
24 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
25 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
26 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
27 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
28 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
29 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
30 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
31 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
32 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
33 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
34 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
35 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
36 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
37 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
39 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
40 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
42 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
43 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
44 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
45 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
46 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
47 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
48 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
49 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
61 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
62 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
63 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
64 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
65 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
66 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
67 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
68 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
69 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
70 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
71 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
72 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
73 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
74 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
75 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
76 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
77 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
78 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
79 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
80 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
81 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
82 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
83 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
84 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
85 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
86 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
87 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
88 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
89 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
90 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
91 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
92 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
93 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
94 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
95 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
96 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
97 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 85.38
Metatranscriptomes 0
Isolates 14.62

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.23
Nodule 0
Rhizoplane 1.54
Rhizosphere 78.46
Stem 0
Stem Tuber 0
Unclassified 10.77

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24737J22298_10000200 3300001990 Bacteria 19492
2 JGI24735J21928_10000013 3300002067 Bacteria 208663
3 JGI24751J29686_10000591 3300002459 Bacteria 9706
4 rootH1_10004715 3300003316 Bacteria 17685
5 rootH2_10001334 3300003320 Bacteria 238709
6 Ga0065715_10005996 3300005293 Bacteria 4141
7 Ga0070658_10002584 3300005327 Bacteria 15085
8 Ga0070683_100001285 3300005329 Bacteria 19108
9 Ga0070683_100016576 3300005329 Bacteria 6502
10 Ga0070659_100000283 3300005366 Bacteria 39665
11 Ga0070714_100000904 3300005435 Bacteria 21045
12 Ga0070713_100004170 3300005436 Bacteria 9644
13 Ga0070684_100003983 3300005535 Bacteria 11191
14 Ga0070697_100000021 3300005536 Bacteria 138216
15 Ga0068855_100000515 3300005563 Bacteria 47609
16 Ga0068855_100001887 3300005563 Bacteria 26031
17 Ga0068855_100006577 3300005563 Bacteria 14130
18 Ga0068856_100031918 3300005614 Bacteria 5153
19 Ga0068852_100019071 3300005616 Bacteria 5419
20 Ga0068861_100014928 3300005719 Bacteria 5461
21 Ga0075366_10006144 3300006195 Bacteria 6551
22 Ga0097621_100032647 3300006237 Bacteria 4140
23 Ga0075430_100017095 3300006846 Bacteria 6179
24 Ga0105240_10000010 3300009093 Bacteria 537830
25 Ga0105240_10000140 3300009093 Bacteria 148591
26 Ga0105240_10000384 3300009093 Bacteria 82999
27 Ga0105240_10002203 3300009093 Bacteria 31766
28 Ga0105240_10024600 3300009093 Bacteria 7932
29 Ga0114129_10015116 3300009147 Bacteria 10985
30 Ga0114129_10053196 3300009147 Bacteria 5679
31 Ga0105242_10047226 3300009176 Bacteria 3495
32 Ga0105237_10004361 3300009545 Bacteria 16401
33 Ga0105237_10019841 3300009545 Bacteria 6940
34 Ga0105249_10029277 3300009553 Bacteria 4973
35 Ga0105239_10000509 3300010375 Bacteria 56261
36 Ga0105239_10002906 3300010375 Bacteria 21402
37 Ga0105239_10004203 3300010375 Bacteria 17293
38 Ga0105239_10005566 3300010375 Bacteria 14732
39 Ga0157373_10001072 3300013100 Bacteria 21023
40 Ga0157369_10043506 3300013105 Bacteria 4895
41 Ga0157374_10000004 3300013296 Bacteria 759774
42 Ga0157376_10000598 3300014969 Bacteria 23295
43 Ga0207705_10000509 3300025909 Bacteria 33052
44 Ga0207654_10006643 3300025911 Bacteria 5819
45 Ga0207695_10000019 3300025913 Bacteria 732137
46 Ga0207695_10000027 3300025913 Bacteria 612456
47 Ga0207695_10000076 3300025913 Bacteria 307969
48 Ga0207695_10000089 3300025913 Bacteria 273463
49 Ga0207695_10000090 3300025913 Bacteria 272143
50 Ga0207695_10000560 3300025913 Bacteria 76436
51 Ga0207671_10000670 3300025914 Bacteria 44624
52 Ga0207671_10004265 3300025914 Bacteria 13758
53 Ga0207694_10007903 3300025924 Bacteria 8050
54 Ga0207664_10008021 3300025929 Bacteria 7342
55 Ga0207690_10001396 3300025932 Bacteria 15186
56 Ga0207686_10003027 3300025934 Bacteria 9056
57 Ga0207661_10015754 3300025944 Bacteria 5568
58 Ga0207667_10000373 3300025949 Bacteria 60563
59 Ga0207667_10006000 3300025949 Bacteria 14783
60 Ga0207667_10015596 3300025949 Bacteria 8621
61 Ga0207667_10044728 3300025949 Bacteria 4690
62 Ga0207675_100024231 3300026118 Bacteria 5643
63 Ga0307515_10000311 3300028794 Bacteria 120044
64 Ga0307515_10046661 3300028794 Bacteria 6615
65 Ga0265338_10000075 3300028800 Bacteria 180334
66 Ga0265338_10000111 3300028800 Bacteria 151469
67 Ga0265338_10035253 3300028800 Bacteria 4815
68 Ga0265324_10000581 3300029957 Bacteria 24955
69 Ga0307511_10002047 3300030521 Bacteria 21127
70 Ga0307509_10000127 3300031507 Bacteria 112456
71 Ga0307408_100000115 3300031548 Bacteria 88580
72 Ga0373937_0018164 3300036401 Bacteria 6275
73 Ga0395900_0000048 3300037418 Bacteria 227760
74 Ga0466969_0000308 3300044656 Bacteria 26976
75 Ga0466972_0000006 3300044658 Bacteria 282264
76 Ga0466966_0002794 3300044684 Bacteria 11478
77 Ga0453684_0005842 3300044712 Bacteria 23932
78 Ga0466970_0004170 3300044765 Bacteria 7109
79 Ga0466957_0000638 3300044842 Bacteria 17723
80 Ga0466959_0000241 3300045049 Bacteria 34027
81 Ga0495650_0000025 3300046471 Bacteria 486001
82 Ga0495650_0007125 3300046471 Bacteria 6790
83 Ga0495585_0000383 3300046492 Bacteria 42537
84 Ga0495606_0000026 3300046507 Bacteria 259118
85 Ga0495633_0000269 3300046558 Bacteria 61152
86 Ga0495668_0000032 3300046616 Bacteria 254951
87 Ga0495611_0000015 3300046648 Bacteria 129696
88 Ga0495625_0000008 3300046660 Bacteria 536165
89 Ga0495625_0000304 3300046660 Bacteria 75543
90 Ga0495625_0002656 3300046660 Bacteria 19044
91 Ga0495625_0003917 3300046660 Bacteria 14324
92 Ga0495625_0012909 3300046660 Bacteria 6746
93 Ga0495661_0002507 3300046665 Bacteria 14119
94 Ga0495649_0000006 3300046694 Bacteria 542188
95 Ga0495687_010671 3300047443 Bacteria 5016
96 Ga0495686_0000097 3300047472 Bacteria 183450
97 Ga0496106_0040540 3300048909 Bacteria 3488
98 Ga0501032_0003111 3300049569 Bacteria 12798
99 Ga0501035_0001997 3300049822 Bacteria 20372
100 Ga0501044_0000164 3300049823 Bacteria 82524
101 nmdc:mga0k408_140_c2 3300050493 Bacteria 30824
102 nmdc:mga0k408_5862_c1 3300050493 Bacteria 6548
103 Ga0500578_0000300 3300053086 Bacteria 60425
104 Ga0500583_0000094 3300053092 Bacteria 48535
105 Ga0500583_0000223 3300053092 Bacteria 20918
106 Ga0500562_000004 3300053108 Bacteria 270087
107 Ga0500618_003189 3300053125 Bacteria 5748
108 Ga0500616_0011595 3300053153 Bacteria 5196
109 Ga0500622_0001256 3300053156 Bacteria 20720
110 Ga0500622_0008406 3300053156 Bacteria 5777
111 Ga0500611_000073 3300053727 Bacteria 40697

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005329 Ga0070683_100001285 Ga0070683_10000128513 712
2 3300049569 Ga0501032_0003111 Ga0501032_0003111_5190_7676 728
3 3300049822 Ga0501035_0001997 Ga0501035_0001997_3934_6420 728
4 3300049823 Ga0501044_0000164 Ga0501044_0000164_66045_68531 728
5 iso_pu_bacteria 2995463766 2995467920 729
6 iso_pu_bacteria 2995463766 2995470623 729
7 3300030521 Ga0307511_10002047 Ga0307511_1000204713 732
8 3300005435 Ga0070714_100000904 Ga0070714_1000009049 733
9 3300005436 Ga0070713_100004170 Ga0070713_1000041704 733
10 3300025929 Ga0207664_10008021 Ga0207664_100080214 733
11 3300005293 Ga0065715_10005996 Ga0065715_100059961 735
12 3300048909 Ga0496106_0040540 Ga0496106_0040540_766_3132 736
13 3300006237 Ga0097621_100032647 Ga0097621_1000326472 737
14 3300009176 Ga0105242_10047226 Ga0105242_100472262 737
15 3300025934 Ga0207686_10003027 Ga0207686_100030276 737
16 3300005536 Ga0070697_100000021 Ga0070697_10000002164 741
17 3300028800 Ga0265338_10000075 Ga0265338_1000007525 741
18 3300031548 Ga0307408_100000115 Ga0307408_10000011566 745
19 3300005327 Ga0070658_10002584 Ga0070658_100025845 748
20 3300025909 Ga0207705_10000509 Ga0207705_1000050921 748
21 3300028800 Ga0265338_10000111 Ga0265338_1000011111 748
22 3300029957 Ga0265324_10000581 Ga0265324_100005817 748
23 3300036401 Ga0373937_0018164 Ga0373937_0018164_2957_5314 750
24 3300028800 Ga0265338_10035253 Ga0265338_100352534 751
25 3300031507 Ga0307509_10000127 Ga0307509_1000012767 751
26 iso_pu_bacteria 2919186247 2919186319 751
27 3300044712 Ga0453684_0005842 Ga0453684_0005842_18433_20781 753
28 3300005563 Ga0068855_100000515 Ga0068855_10000051517 758
29 3300025913 Ga0207695_10000089 Ga0207695_1000008951 758
30 3300025949 Ga0207667_10000373 Ga0207667_1000037341 758
31 iso_pu_bacteria 2939664404 2939666411 767
32 3300053156 Ga0500622_0008406 Ga0500622_0008406_31_2607 852
33 3300009093 Ga0105240_10000140 Ga0105240_10000140101 897
34 3300009093 Ga0105240_10000384 Ga0105240_1000038442 897
35 3300009545 Ga0105237_10019841 Ga0105237_100198412 897
36 3300010375 Ga0105239_10005566 Ga0105239_100055663 897
37 3300025913 Ga0207695_10000027 Ga0207695_10000027237 897
38 3300025913 Ga0207695_10000560 Ga0207695_1000056037 897
39 3300005616 Ga0068852_100019071 Ga0068852_1000190712 898
40 3300025924 Ga0207694_10007903 Ga0207694_100079032 898
41 iso_pu_bacteria 2914759650 2914761339 905
42 3300009093 Ga0105240_10024600 Ga0105240_100246004 907
43 3300013296 Ga0157374_10000004 Ga0157374_10000004415 909
44 3300014969 Ga0157376_10000598 Ga0157376_100005983 909
45 3300025944 Ga0207661_10015754 Ga0207661_100157542 913
46 iso_pu_bacteria 2896317667 2896319113 913
47 iso_pu_bacteria 3003233435 3003233861 913
48 3300053092 Ga0500583_0000223 Ga0500583_0000223_11116_13911 914
49 iso_pu_bacteria 2721755487 2722730740 914
50 iso_pu_bacteria 2904780799 2904783257 914
51 iso_pu_bacteria 2919177583 2919180865 914
52 3300005366 Ga0070659_100000283 Ga0070659_1000002835 915
53 3300025932 Ga0207690_10001396 Ga0207690_100013965 915
54 3300025914 Ga0207671_10004265 Ga0207671_100042654 918
55 3300047443 Ga0495687_010671 Ga0495687_010671_607_3366 918
56 3300010375 Ga0105239_10002906 Ga0105239_100029062 920
57 3300005329 Ga0070683_100016576 Ga0070683_1000165762 921
58 3300005535 Ga0070684_100003983 Ga0070684_1000039832 921
59 3300005563 Ga0068855_100001887 Ga0068855_1000018874 921
60 3300005719 Ga0068861_100014928 Ga0068861_1000149282 921
61 3300006846 Ga0075430_100017095 Ga0075430_1000170952 921
62 3300009093 Ga0105240_10002203 Ga0105240_1000220322 921
63 3300009147 Ga0114129_10015116 Ga0114129_100151163 921
64 3300013100 Ga0157373_10001072 Ga0157373_100010724 921
65 3300025913 Ga0207695_10000076 Ga0207695_10000076198 921
66 3300025913 Ga0207695_10000090 Ga0207695_10000090196 921
67 3300025949 Ga0207667_10006000 Ga0207667_100060005 921
68 3300026118 Ga0207675_100024231 Ga0207675_1000242312 921
69 3300002459 JGI24751J29686_10000591 JGI24751J29686_100005913 923
70 3300009553 Ga0105249_10029277 Ga0105249_100292772 923
71 iso_pu_bacteria 2738543023 2739300160 923
72 3300009147 Ga0114129_10053196 Ga0114129_100531962 924
73 iso_pu_bacteria 2852627209 2852628638 924
74 3300025911 Ga0207654_10006643 Ga0207654_100066432 925
75 3300025913 Ga0207695_10000019 Ga0207695_10000019286 925
76 3300053727 Ga0500611_000073 Ga0500611_000073_25672_28485 925
77 3300005563 Ga0068855_100006577 Ga0068855_1000065774 926
78 3300025949 Ga0207667_10044728 Ga0207667_100447281 926
79 3300028794 Ga0307515_10046661 Ga0307515_100466613 926
80 3300044656 Ga0466969_0000308 Ga0466969_0000308_353_3163 926
81 3300044684 Ga0466966_0002794 Ga0466966_0002794_4914_7724 926
82 3300045049 Ga0466959_0000241 Ga0466959_0000241_30840_33650 926
83 iso_pu_bacteria 2929154850 2929156000 926
84 3300005614 Ga0068856_100031918 Ga0068856_1000319182 927
85 3300009093 Ga0105240_10000010 Ga0105240_10000010166 927
86 3300010375 Ga0105239_10000509 Ga0105239_100005092 927
87 3300046648 Ga0495611_0000015 Ga0495611_0000015_47755_50559 927
88 3300010375 Ga0105239_10004203 Ga0105239_100042031 928
89 3300044842 Ga0466957_0000638 Ga0466957_0000638_12293_15127 928
90 3300053125 Ga0500618_003189 Ga0500618_003189_2848_5664 928
91 iso_pu_bacteria 2977232053 2977235722 929
92 3300044658 Ga0466972_0000006 Ga0466972_0000006_54829_57645 930
93 3300044765 Ga0466970_0004170 Ga0466970_0004170_3008_5833 930
94 3300009545 Ga0105237_10004361 Ga0105237_100043613 931
95 3300046471 Ga0495650_0000025 Ga0495650_0000025_238155_241022 931
96 3300046492 Ga0495585_0000383 Ga0495585_0000383_16755_19553 931
97 3300046660 Ga0495625_0000008 Ga0495625_0000008_63177_66044 931
98 3300046665 Ga0495661_0002507 Ga0495661_0002507_2296_5163 931
99 3300046694 Ga0495649_0000006 Ga0495649_0000006_288677_291544 931
100 iso_pu_bacteria 2599185184 2599480249 931
101 iso_pu_bacteria 2928078545 2928083474 931
102 iso_pu_bacteria 2928147474 2928151263 931
103 iso_pu_bacteria 2932082852 2932084562 931
104 3300053086 Ga0500578_0000300 Ga0500578_0000300_44899_47721 932
105 3300053092 Ga0500583_0000094 Ga0500583_0000094_24453_27275 932
106 3300053108 Ga0500562_000004 Ga0500562_000004_238269_241103 932
107 3300053156 Ga0500622_0001256 Ga0500622_0001256_7858_10698 932
108 iso_pu_bacteria 2919437846 2919441731 932
109 3300053153 Ga0500616_0011595 Ga0500616_0011595_1691_4555 933
110 3300037418 Ga0395900_0000048 Ga0395900_0000048_117516_120353 934
111 3300001990 JGI24737J22298_10000200 JGI24737J22298_100002003 935
112 3300002067 JGI24735J21928_10000013 JGI24735J21928_100000135 935
113 3300003316 rootH1_10004715 rootH1_100047153 935
114 3300003320 rootH2_10001334 rootH2_1000133434 935
115 3300006195 Ga0075366_10006144 Ga0075366_100061443 935
116 3300013105 Ga0157369_10043506 Ga0157369_100435062 935
117 3300025914 Ga0207671_10000670 Ga0207671_1000067018 935
118 3300025949 Ga0207667_10015596 Ga0207667_100155962 935
119 3300028794 Ga0307515_10000311 Ga0307515_1000031170 935
120 3300046471 Ga0495650_0007125 Ga0495650_0007125_3926_6754 935
121 3300046507 Ga0495606_0000026 Ga0495606_0000026_247152_249962 935
122 3300046558 Ga0495633_0000269 Ga0495633_0000269_35569_38463 935
123 3300046616 Ga0495668_0000032 Ga0495668_0000032_230308_233202 935
124 3300046660 Ga0495625_0000304 Ga0495625_0000304_33529_36423 935
125 3300046660 Ga0495625_0002656 Ga0495625_0002656_10106_13000 935
126 3300046660 Ga0495625_0003917 Ga0495625_0003917_2373_5201 935
127 3300046660 Ga0495625_0012909 Ga0495625_0012909_1448_4276 935
128 3300047472 Ga0495686_0000097 Ga0495686_0000097_102097_104925 935
129 3300050493 nmdc:mga0k408_140_c2 nmdc:mga0k408_140_c2_24596_27493 935
130 3300050493 nmdc:mga0k408_5862_c1 nmdc:mga0k408_5862_c1_46_2937 935

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF22124

Glyco_hydro_95_cat

Glycosyl hydrolase family 95 catalytic domain

481

881

0.99

PF14498

Glyco_hyd_65N_2

Glycosyl hydrolase family 65, N-terminal domain

33

130

0.95

PF14498

Glyco_hyd_65N_2

Glycosyl hydrolase family 65, N-terminal domain

299

459

0.94

PF21307

Glyco_hydro_95_C

Glycoside hydrolase family 95, C-terminal domain

883

963

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
7kmq-assembly1.cif.gz_B crystal structure of the gh95 alpha-l-1,2-fucosidase (xac1774) from xanthomonas citri 0.9594 25 929
7kmq-assembly1.cif.gz_A crystal structure of the gh95 alpha-l-1,2-fucosidase (xac1774) from xanthomonas citri 0.9536 25 935
7kmq-assembly1.cif.gz_A crystal structure of the gh95 alpha-l-1,2-fucosidase (xac1774) from xanthomonas citri 0.9411 25 935
7kmq-assembly1.cif.gz_B crystal structure of the gh95 alpha-l-1,2-fucosidase (xac1774) from xanthomonas citri 0.9368 25 929
4ufc-assembly1.cif.gz_A crystal structure of the gh95 enzyme bacova_03438 0.9013 25 927
ID Description Score Start End Superfamily
af_I1JAZ9_346_721_1.50.10.10 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.9559 488 851 1.50.10.10
af_Q339Q0_341_759_1.50.10.10 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.954 478 851 1.50.10.10
af_Q8L7W8_302_753_1.50.10.10 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.9536 425 851 1.50.10.10
af_K7N372_779_874_2.60.40.1180 Mainly Beta;Sandwich;Immunoglobulin-like;Golgi alpha-mannosidase II 0.9342 853 934 2.60.40.1180
af_A0A1D6KCI7_1_88_2.60.40.1180 Mainly Beta;Sandwich;Immunoglobulin-like;Golgi alpha-mannosidase II 0.9338 850 933 2.60.40.1180
ID Description Score Start End GO Terms
AF-A0A4V1UH05-F1-model_v4 deleted 0.9871 359 796
AF-A0A699QNI4-F1-model_v4 Alpha-L-fucosidase 2-like isoform X2 0.9863 549 806 GO:0004560
GO:0005975
AF-A0A519TE00-F1-model_v4 Glycoside hydrolase family 95 protein 0.9845 551 895 GO:0004560
GO:0005975
AF-A0A4Q3AZ17-F1-model_v4 deleted 0.9841 450 933
AF-A0A4V1UH05-F1-model_v4 deleted 0.9804 359 796

Feature Viewer

pLDDT pTM Quality
91.24 0.91 High
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Predicted Structure (AlphaFold2)

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