F142003

General Info

Members Datasets Scaffolds Average Seq Length
129 81 258 319

Family's Representative Sequence

Representative Sequence 3300025910|Ga0207684_10003528|Ga0207684_1000352815
Length 365
Sequence VHNECMDSQAQKLPKTLQEAIVYFSDADRALAFAIILRWPDGKITCPRCESDRHSFISTRRMWFCKGCKKQFTVKVGTIFEDSPLGMDKWMTAVWLIVNCKNGISSYEIARDLGITQKSAWFMMHRIRGAMDSGSFNKLSGEIEADETFIGGKARNMHVSKRERRITGTGGKDKTAVMGILERGGKVRTIVVDSRRKKVLQAEVKKHVEAGSALYTDALLSYDGLASDYAHQVIDHAMKYVDGKIHTNGLENFWSLLKRSIGGTYVSVEPFHLFRYLDEQAFRYNNRKEMNDADRFQSVMGKVFGRRLTWKQLTGKTGSQAQLNCEGKSKAKTWKSERLTSGFPYFRSADRFVGCILRLGFGNAE

Samples

Sample ID Description Type Environment
1 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
6 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
7 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
8 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
9 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
10 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
11 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
12 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
13 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
14 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
15 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
16 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
17 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
18 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
19 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
20 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
21 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
22 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
23 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
24 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
25 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
26 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
27 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
28 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
29 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
30 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
31 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
32 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
33 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
34 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
35 3300022732 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU1 Metagenome Rhizosphere
36 3300022734 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU3 Metagenome Rhizosphere
37 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
49 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
50 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
51 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
52 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
53 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
54 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
55 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
56 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
57 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
58 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
59 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
60 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
61 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
62 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
63 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
64 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
65 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
66 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
67 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
68 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
69 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
70 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
71 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
72 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
73 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
74 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
75 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
76 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
77 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
78 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
79 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
80 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
81 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.45
Metatranscriptomes 1.55
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.55
Nodule 0
Rhizoplane 0
Rhizosphere 95.35
Stem 0
Stem Tuber 0
Unclassified 25.58

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207684_10003528 3300025910 Bacteria 15243
2 rootH2_10155820 3300003320 Bacteria 9829
3 Ga0065707_10000678 3300005295 Bacteria 18643
4 Ga0070683_100073186 3300005329 Bacteria 3200
5 Ga0070694_100002319 3300005444 Bacteria 11256
6 Ga0070708_100099608 3300005445 Bacteria 2659
7 Ga0070708_100245490 3300005445 Unclassified 1681
8 Ga0070681_10035766 3300005458 Unclassified 4989
9 Ga0070681_10432497 3300005458 Unclassified 1228
10 Ga0070685_10035415 3300005466 Bacteria 2816
11 Ga0070706_100032168 3300005467 Bacteria 4838
12 Ga0070706_100092097 3300005467 Unclassified 2812
13 Ga0070706_100228965 3300005467 Unclassified 1735
14 Ga0070706_100320627 3300005467 Unclassified 1445
15 Ga0070707_100000594 3300005468 Bacteria 36399
16 Ga0070707_100045389 3300005468 Bacteria 4206
17 Ga0070707_100137496 3300005468 Unclassified 2377
18 Ga0070707_100147652 3300005468 Bacteria 2288
19 Ga0070699_100092653 3300005518 Bacteria 2643
20 Ga0070697_100000161 3300005536 Bacteria 54619
21 Ga0070697_100000194 3300005536 Bacteria 49634
22 Ga0070697_100000244 3300005536 Bacteria 44183
23 Ga0070697_100000470 3300005536 Bacteria 30775
24 Ga0070697_100001821 3300005536 Bacteria 16288
25 Ga0070697_100044490 3300005536 Bacteria 3596
26 Ga0070697_100077150 3300005536 Bacteria 2740
27 Ga0070665_100028066 3300005548 Bacteria 5669
28 Ga0068855_100105140 3300005563 Unclassified 3246
29 Ga0068855_100151973 3300005563 Unclassified 2632
30 Ga0068855_100152384 3300005563 Unclassified 2628
31 Ga0068855_100353661 3300005563 Bacteria 1618
32 Ga0068859_100006877 3300005617 Bacteria 11549
33 Ga0068859_100046616 3300005617 Bacteria 4352
34 Ga0068864_100074025 3300005618 Bacteria 2971
35 Ga0068864_100113792 3300005618 Unclassified 2412
36 Ga0068863_100008476 3300005841 Bacteria 10042
37 Ga0068863_100285575 3300005841 Unclassified 1599
38 Ga0068860_100017413 3300005843 Bacteria 7000
39 Ga0068860_100220752 3300005843 Bacteria 1841
40 Ga0068862_100064346 3300005844 Bacteria 3157
41 Ga0070717_10000328 3300006028 Bacteria 30753
42 Ga0070717_10015796 3300006028 Bacteria 5836
43 Ga0068871_100136983 3300006358 Bacteria 2080
44 Ga0097620_100006877 3300006931 Bacteria 11549
45 Ga0097620_100046618 3300006931 Bacteria 4352
46 Ga0105240_10065682 3300009093 Bacteria 4503
47 Ga0105240_10168684 3300009093 Unclassified 2594
48 Ga0105240_10249544 3300009093 Bacteria 2053
49 Ga0105245_10033361 3300009098 Unclassified 4563
50 Ga0105245_10260471 3300009098 Bacteria 1688
51 Ga0105241_10049447 3300009174 Bacteria 3202
52 Ga0105242_10029671 3300009176 Bacteria 4362
53 Ga0105242_10079513 3300009176 Bacteria 2738
54 Ga0105248_10270608 3300009177 Unclassified 1913
55 Ga0105238_10000015 3300009551 Bacteria 241590
56 Ga0105238_10518143 3300009551 Bacteria 1195
57 Ga0105249_10394080 3300009553 Bacteria 1413
58 Ga0157370_10072706 3300013104 Bacteria 3244
59 Ga0157370_10091049 3300013104 Bacteria 2864
60 Ga0157370_10108703 3300013104 Bacteria 2593
61 Ga0163162_10002452 3300013306 Bacteria 17499
62 Ga0163162_10011989 3300013306 Bacteria 8453
63 Ga0163162_10079941 3300013306 Unclassified 3336
64 Ga0163162_10341656 3300013306 Unclassified 1629
65 Ga0163163_10000822 3300014325 Bacteria 26449
66 Ga0163163_10000971 3300014325 Bacteria 24377
67 Ga0163161_10031549 3300017792 Unclassified 3776
68 Ga0213876_10007523 3300021384 Bacteria 5916
69 Ga0224569_100594 3300022732 Unclassified 3115
70 Ga0224571_100107 3300022734 Unclassified 3370
71 Ga0224571_100396 3300022734 Bacteria 2365
72 Ga0207684_10425591 3300025910 Bacteria 1140
73 Ga0207654_10049080 3300025911 Bacteria 2418
74 Ga0207695_10121452 3300025913 Unclassified 2580
75 Ga0207695_10133628 3300025913 Bacteria 2436
76 Ga0207646_10000020 3300025922 Bacteria 272909
77 Ga0207646_10000877 3300025922 Bacteria 38868
78 Ga0207646_10030940 3300025922 Bacteria 4848
79 Ga0207646_10202969 3300025922 Bacteria 1791
80 Ga0207694_10000017 3300025924 Bacteria 342100
81 Ga0207686_10051326 3300025934 Bacteria 2569
82 Ga0207667_10138375 3300025949 Unclassified 2507
83 Ga0207667_10312908 3300025949 Unclassified 1604
84 Ga0207641_10006613 3300026088 Bacteria 9734
85 Ga0207641_10324753 3300026088 Unclassified 1460
86 Ga0207676_10059327 3300026095 Unclassified 3021
87 Ga0268266_10014875 3300028379 Bacteria 6681
88 Ga0268265_10029878 3300028380 Bacteria 3920
89 Ga0268264_10012312 3300028381 Bacteria 7040
90 Ga0268264_10252585 3300028381 Bacteria 1639
91 Ga0265338_10002593 3300028800 Bacteria 26721
92 Ga0265760_10000009 3300031090 Bacteria 108179
93 Ga0265760_10006875 3300031090 Bacteria 3260
94 Ga0265327_10026244 3300031251 Unclassified 3379
95 Ga0265314_10065359 3300031711 Bacteria 2457
96 Ga0307510_10017590 3300033180 Bacteria 8429
97 Ga0373934_0057397 3300035086 Bacteria 1549
98 Ga0373932_0000086 3300035112 Bacteria 24375
99 Ga0373961_0000841 3300035241 Bacteria 10390
100 Ga0373935_0002562 3300035692 Bacteria 10438
101 Ga0373937_0004408 3300036401 Bacteria 11964
102 Ga0436365_1017253 3300039437 Bacteria 22039
103 Ga0453683_0051857 3300044673 Bacteria 2569
104 Ga0495580_0000627 3300046472 Bacteria 29922
105 Ga0495580_0151360 3300046472 Unclassified 1607
106 Ga0495580_0220412 3300046472 Bacteria 1304
107 Ga0495582_0000169 3300046473 Bacteria 35465
108 Ga0495608_0024728 3300046511 Unclassified 4104
109 Ga0495618_0031311 3300046514 Bacteria 3327
110 Ga0495643_0014715 3300046522 Unclassified 4648
111 Ga0495667_0027352 3300046559 Bacteria 3843
112 Ga0495634_0071002 3300046642 Bacteria 2294
113 Ga0495657_0056566 3300046675 Bacteria 2611
114 Ga0495613_0009783 3300046689 Bacteria 7127
115 Ga0495600_0021560 3300046809 Unclassified 4128
116 Ga0495680_0063562 3300047322 Bacteria 2834
117 Ga0495675_0038226 3300047444 Bacteria 3056
118 Ga0495684_0011335 3300047471 Bacteria 6882
119 Ga0495684_0035624 3300047471 Bacteria 3816
120 Ga0495686_0075122 3300047472 Bacteria 2073
121 Ga0501298_021467 3300049521 Unclassified 1209
122 Ga0501034_0089233 3300049571 Bacteria 3081
123 Ga0501225_0017673 3300049705 Bacteria 1980
124 Ga0501083_0008141 3300049744 Bacteria 7418
125 Ga0501083_0344455 3300049744 Unclassified 969
126 nmdc:mga0n895_146362_c1 3300050512 Bacteria 2392
127 Ga0500568_0000129 3300053139 Bacteria 68121
128 Ga0500616_0000262 3300053153 Bacteria 80829
129 Ga0501084_0435415 3300054114 Unclassified 1108
130 Ga0207684_10003528
131 rootH2_10155820
132 Ga0065707_10000678
133 Ga0070683_100073186
134 Ga0070694_100002319
135 Ga0070708_100099608
136 Ga0070708_100245490
137 Ga0070681_10035766
138 Ga0070681_10432497
139 Ga0070685_10035415
140 Ga0070706_100032168
141 Ga0070706_100092097
142 Ga0070706_100228965
143 Ga0070706_100320627
144 Ga0070707_100000594
145 Ga0070707_100045389
146 Ga0070707_100137496
147 Ga0070707_100147652
148 Ga0070699_100092653
149 Ga0070697_100000161
150 Ga0070697_100000194
151 Ga0070697_100000244
152 Ga0070697_100000470
153 Ga0070697_100001821
154 Ga0070697_100044490
155 Ga0070697_100077150
156 Ga0070665_100028066
157 Ga0068855_100105140
158 Ga0068855_100151973
159 Ga0068855_100152384
160 Ga0068855_100353661
161 Ga0068859_100006877
162 Ga0068859_100046616
163 Ga0068864_100074025
164 Ga0068864_100113792
165 Ga0068863_100008476
166 Ga0068863_100285575
167 Ga0068860_100017413
168 Ga0068860_100220752
169 Ga0068862_100064346
170 Ga0070717_10000328
171 Ga0070717_10015796
172 Ga0068871_100136983
173 Ga0097620_100006877
174 Ga0097620_100046618
175 Ga0105240_10065682
176 Ga0105240_10168684
177 Ga0105240_10249544
178 Ga0105245_10033361
179 Ga0105245_10260471
180 Ga0105241_10049447
181 Ga0105242_10029671
182 Ga0105242_10079513
183 Ga0105248_10270608
184 Ga0105238_10000015
185 Ga0105238_10518143
186 Ga0105249_10394080
187 Ga0157370_10072706
188 Ga0157370_10091049
189 Ga0157370_10108703
190 Ga0163162_10002452
191 Ga0163162_10011989
192 Ga0163162_10079941
193 Ga0163162_10341656
194 Ga0163163_10000822
195 Ga0163163_10000971
196 Ga0163161_10031549
197 Ga0213876_10007523
198 Ga0224569_100594
199 Ga0224571_100107
200 Ga0224571_100396
201 Ga0207684_10425591
202 Ga0207654_10049080
203 Ga0207695_10121452
204 Ga0207695_10133628
205 Ga0207646_10000020
206 Ga0207646_10000877
207 Ga0207646_10030940
208 Ga0207646_10202969
209 Ga0207694_10000017
210 Ga0207686_10051326
211 Ga0207667_10138375
212 Ga0207667_10312908
213 Ga0207641_10006613
214 Ga0207641_10324753
215 Ga0207676_10059327
216 Ga0268266_10014875
217 Ga0268265_10029878
218 Ga0268264_10012312
219 Ga0268264_10252585
220 Ga0265338_10002593
221 Ga0265760_10000009
222 Ga0265760_10006875
223 Ga0265327_10026244
224 Ga0265314_10065359
225 Ga0307510_10017590
226 Ga0373934_0057397
227 Ga0373932_0000086
228 Ga0373961_0000841
229 Ga0373935_0002562
230 Ga0373937_0004408
231 Ga0436365_1017253
232 Ga0453683_0051857
233 Ga0495580_0000627
234 Ga0495580_0151360
235 Ga0495580_0220412
236 Ga0495582_0000169
237 Ga0495608_0024728
238 Ga0495618_0031311
239 Ga0495643_0014715
240 Ga0495667_0027352
241 Ga0495634_0071002
242 Ga0495657_0056566
243 Ga0495613_0009783
244 Ga0495600_0021560
245 Ga0495680_0063562
246 Ga0495675_0038226
247 Ga0495684_0011335
248 Ga0495684_0035624
249 Ga0495686_0075122
250 Ga0501298_021467
251 Ga0501034_0089233
252 Ga0501225_0017673
253 Ga0501083_0008141
254 Ga0501083_0344455
255 nmdc:mga0n895_146362_c1
256 Ga0500568_0000129
257 Ga0500616_0000262
258 Ga0501084_0435415

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12762

DDE_Tnp_IS1595

ISXO2-like transposase domain

138

285

0.98

PF12760

Zn_Tnp_IS1595

Transposase zinc-ribbon domain

25

71

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
2ve8-assembly3.cif.gz_C xray structure of ftsk gamma domain (p. aeruginosa) 0.81 86 126
3f72-assembly1.cif.gz_B crystal structure of the staphylococcus aureus pi258 cadc metal binding site 2 mutant 0.8007 89 123
3f72-assembly1.cif.gz_A crystal structure of the staphylococcus aureus pi258 cadc metal binding site 2 mutant 0.7845 89 123
3fm5-assembly3.cif.gz_D x-ray crystal structure of transcriptional regulator (marr family) from rhodococcus sp. rha1 0.7801 85 123
3fm5-assembly3.cif.gz_B x-ray crystal structure of transcriptional regulator (marr family) from rhodococcus sp. rha1 0.7738 85 123
ID Description Score Start End Superfamily
af_P76540_107_166_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8665 90 123 1.10.10.10
2z99A01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8385 84 120 1.10.10.10
1jmrA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8378 83 120 1.10.10.10
1mkmA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8378 83 120 1.10.10.10
af_Q2G142_73_156_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8368 84 127 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A6N2JT95-F1-model_v4 IS1595 family transposase 0.9391 77 320
AF-A0A2V6LEI6-F1-model_v4 DDE transposase 0.9375 7 112
AF-A0A6N2JT95-F1-model_v4 IS1595 family transposase 0.9316 77 320
AF-A0A1F6CSF9-F1-model_v4 ISXO2-like transposase domain-containing protein 0.9315 5 250
AF-A0A6N2JKU4-F1-model_v4 IS1595 family transposase 0.93 1 316

Map