F139948

General Info

Members Datasets Scaffolds Average Seq Length
128 102 85 780

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2904430863|2904431104
Length 849
Sequence DTSTHPSDGRHPSDGRHQTDGRHQTDGRQARGGAATRLPSDPQHVVDGTAPDRVTALLTAMTLEEKTAQLVGYWLDQNGVVAPMQGEMAAAQGGETLPDVTRHGLGQYTRVYGTRPVEPDERAAWLWAEQRRLKRETRLGIPALVHEECLTGLAAWRAATFPTPLAWGAAFDPELVEQVGAVIGRSMRELGVHQGLAPVLDVVRDPRWGRVDECIGEDPYLVGTVGSAYVRGVQSAGVDATLKHFLGYSASRAGRNHAPVHAGPREVADVFLPPFEMALLDGGARSVMNSYAEVDGVPVAADPELLTGLLRDRLGFDGTVVADYFSVAFLEVMHGVARDRGEAAALALTAGIDVELPTGDAYLAPLVERVRGGLVDEALVDRAVLRVLRQKERLGLLDPDAFEDEPPTGVDLDSPEHRALARRLAAESLVLLANDGVLPLGGVPSGAVAGAAGETGADLRGPVAVIGPNAHRAEALQGCYSFANHVLATHPGLPLGFAIPTVLEALQDGLGDDAVRYAAGAEVEGDDRSGFAEAVATARDAAVAVVVVGDQAGLFGRGTVGEGNDSETLDLPGVQRELVEAVVATGTPTVVVLLTGRPYAIGWMLDGDHAKPSAVVQAFFPGEGGGLAIADLLTGVTAPSGRLPVSLPRSAGAQPYSYLHPRLGGPSDVTATDSTPVRPFGFGLTYTSVAYEDLQVDDTVATDGAFTASVTIRNTGDRDGTEVVQLYGHDVAASVTRPVAQLLGYARVAVPAGGSVRVRFDVPVQRFAFTDRAMRKVVEPGDVQVWVASDAAASRPGGPVPTGGIVASGDGPVRHEVPGSATDRAVVRVTGAVHEVSLADRRTVTWSLV

Samples

Sample ID Description Type Environment
1 2643221546 Microbacterium sp. Root53 Isolate Unclassified
2 2643221616 Leifsonia sp. Root227 Isolate Unclassified
3 2643221632 Leifsonia sp. Root112D2 Isolate Unclassified
4 2738541272 Promicromonospora sp. AC04 Isolate Unclassified
5 2738543027 Promicromonospora sp. CF082 Isolate Unclassified
6 2739367654 Promicromonospora sp. YR516 Isolate Unclassified
7 2751185788 Curtobacterium pusillum AA3 Isolate Unclassified
8 2758568522 Promicromonospora thailandica SAI-039 Isolate Unclassified
9 2758568621 Promicromonospora sukumoe SAI-064 Isolate Unclassified
10 2799112218 Motilibacter rhizosphaerae DSM 45622 Isolate Rhizosphere
11 2808606306 Microbacterium sp. SLBN-146 Isolate Unclassified
12 2808606368 Microbacterium sp. SLBN-1 Isolate Unclassified
13 2808606394 Promicromonospora sp. C35 Isolate Unclassified
14 2808606447 Microbacterium sp. HAR-UPW-R2A-48 Isolate Unclassified
15 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
16 2835188231 Isoptericola variabilis JZ7 Isolate Unclassified
17 2839986021 Cellulosimicrobium cellulans JZ5 Isolate Unclassified
18 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
19 2844852863 Herbiconiux flava DSM 26474 Isolate Rhizosphere
20 2852632344 Microbacterium sp. AK009 Isolate Rhizosphere
21 2852646457 Microbacterium sp. AK031 Isolate Rhizosphere
22 2857720070 Microbacterium sp. R-72113 Isolate Unclassified
23 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
24 2904430863 Curtobacterium oceanosedimentum 1519 Isolate Rhizosphere
25 2904501621 Curtobacterium sp. 1909 Isolate Unclassified
26 2906799679 Microbacterium karelineae TRM80801 Isolate Unclassified
27 2908674828 Curtobacterium sp. 1517 Isolate Rhizosphere
28 2909074476 Curtobacterium sp. 1310 Isolate Rhizosphere
29 2919039151 Curtobacterium sp. 260 Isolate Rhizosphere
30 2919042368 Curtobacterium sp. 320 Isolate Rhizosphere
31 2919055335 Leifsonia sp. 1010 Isolate Rhizosphere
32 2919523602 Leifsonia shinshuensis 3821 Isolate Unclassified
33 2920879853 Kocuria salina CV6 Isolate Unclassified
34 2928104781 Curtobacterium sp. 1544 Isolate Rhizosphere
35 2928153084 Leifsonia sp. 563 Isolate Unclassified
36 2928500415 Curtobacterium oceanosedimentum 1257 Isolate Rhizosphere
37 2932431166 Cellulosimicrobium sp. 4261 Isolate Rhizosphere
38 2945968032 Microbacterium murale W2I7 Isolate Rhizosphere
39 2946033335 Microbacterium sp. W4I4 Isolate Rhizosphere
40 2946041624 Microbacterium natoriense W4I9-1 Isolate Rhizosphere
41 2984551494 Curtobacterium sp. SORGH_AS776 Isolate Aerial Root
42 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
43 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
44 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
45 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
46 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
47 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
48 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
49 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
50 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
51 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
52 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
53 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
54 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
55 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
56 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
62 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
63 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
66 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
69 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
70 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
71 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
72 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
73 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
74 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
75 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
76 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
77 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
78 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
79 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
80 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
81 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
82 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
83 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
84 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
85 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
86 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
87 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
88 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
89 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
90 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
91 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
92 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
93 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
94 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
95 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
96 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
97 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
98 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
99 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
100 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
101 8056037122 Herbiconiux gentiana CPCC 205716 Isolate Rhizosphere
102 8056579771 Promicromonospora iranensis UTMC 00792 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 65.62
Metatranscriptomes 0.78
Isolates 33.59

Biome Distribution

Category Percentage (%)
Aerial Root 0.78
Bulb 0
Endosphere 18.75
Nodule 0
Rhizoplane 1.56
Rhizosphere 42.97
Stem 0
Stem Tuber 0.78
Unclassified 35.16

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25164J39214_1000209 3300002772 Bacteria 49837
2 JGI25165J46597_1000125 3300003214 Bacteria 131155
3 Ga0055539_1000135 3300003752 Bacteria 77054
4 Ga0055533_1000002 3300003756 Bacteria 1196393
5 Ga0055525_1000303 3300003759 Bacteria 40809
6 Ga0055527_1000025 3300003760 Bacteria 195817
7 Ga0055542_1000048 3300003762 Bacteria 195800
8 Ga0055529_1000057 3300003763 Bacteria 195807
9 Ga0070682_100019374 3300005337 Bacteria 3991
10 Ga0157369_10000225 3300013105 Bacteria 78054
11 Ga0157369_10015715 3300013105 Bacteria 8530
12 Ga0157369_10038107 3300013105 Bacteria 5259
13 Ga0171462_1001 3300013250 Bacteria 1135406
14 Ga0157372_10088779 3300013307 Bacteria 3511
15 Ga0206353_11015650 3300020082 Bacteria 3725
16 Ga0213875_10000243 3300021388 Bacteria 54536
17 Ga0209566_100032 3300025225 Bacteria 338313
18 Ga0209674_100001 3300025226 Bacteria 4013750
19 Ga0209672_100011 3300025228 Bacteria 856297
20 Ga0209147_100317 3300025229 Bacteria 37070
21 Ga0209563_100001 3300025230 Bacteria 4013775
22 Ga0209563_100969 3300025230 Bacteria 8413
23 Ga0207427_100039 3300025231 Bacteria 291576
24 Ga0209437_100471 3300025233 Bacteria 30810
25 Ga0209677_100001 3300025253 Bacteria 4013787
26 Ga0209677_103246 3300025253 Bacteria 5416
27 Ga0209148_1000023 3300025254 Bacteria 680511
28 Ga0209233_1000014 3300025261 Bacteria 996641
29 Ga0209455_1000023 3300025272 Bacteria 680449
30 Ga0207655_1010949 3300025728 Bacteria 5451
31 Ga0307406_10000005 3300031901 Bacteria 155981
32 Ga0395899_0003505 3300037312 Bacteria 12430
33 Ga0395900_0001829 3300037418 Bacteria 24258
34 Ga0395900_0007448 3300037418 Bacteria 11309
35 Ga0395900_0021895 3300037418 Bacteria 6536
36 Ga0395898_0000100 3300037466 Bacteria 226446
37 Ga0436364_0050479 3300037853 Bacteria 121594
38 Ga0451793_0337335 3300041452 Bacteria 3640
39 Ga0466972_0009055 3300044658 Bacteria 4998
40 Ga0466970_0003172 3300044765 Bacteria 7990
41 Ga0466970_0014511 3300044765 Bacteria 4046
42 Ga0466970_0029057 3300044765 Bacteria 2908
43 Ga0466959_0006327 3300045049 Bacteria 8189
44 Ga0466967_0018755 3300045976 Bacteria 5542
45 Ga0496105_0039801 3300048908 Bacteria 3875
46 Ga0496117_0006067 3300048920 Bacteria 12401
47 Ga0496117_0007513 3300048920 Bacteria 10629
48 Ga0496117_0015761 3300048920 Bacteria 6417
49 Ga0496117_0024489 3300048920 Bacteria 4773
50 Ga0496118_0002591 3300048921 Bacteria 24098
51 Ga0496118_0005171 3300048921 Bacteria 14944
52 Ga0496119_0021667 3300048922 Bacteria 4633
53 Ga0496119_0032418 3300048922 Bacteria 3482
54 Ga0496122_0000846 3300048925 Bacteria 57849
55 Ga0496122_0001203 3300048925 Bacteria 44067
56 Ga0496122_0013206 3300048925 Bacteria 8106
57 Ga0496122_0014656 3300048925 Bacteria 7561
58 Ga0496123_0000009 3300048926 Bacteria 509486
59 Ga0496123_0005824 3300048926 Bacteria 12229
60 Ga0496123_0007170 3300048926 Bacteria 10580
61 Ga0496124_0000234 3300048927 Bacteria 108472
62 Ga0496124_0001171 3300048927 Bacteria 41048
63 Ga0496124_0002072 3300048927 Bacteria 27145
64 Ga0496124_0014698 3300048927 Bacteria 7556
65 Ga0496125_0000480 3300048928 Bacteria 70815
66 Ga0496126_0013917 3300048929 Bacteria 8162
67 Ga0501032_0004955 3300049569 Bacteria 9959
68 Ga0501033_0035807 3300049570 Bacteria 3721
69 Ga0501033_0044415 3300049570 Bacteria 3308
70 Ga0501034_0021194 3300049571 Bacteria 6628
71 Ga0501034_0031925 3300049571 Bacteria 5350
72 Ga0501036_0005698 3300049572 Bacteria 10103
73 Ga0501038_0000969 3300049574 Bacteria 25734
74 Ga0501042_0035053 3300049578 Bacteria 3560
75 Ga0501047_0005656 3300049581 Bacteria 11768
76 Ga0501070_0000664 3300049586 Bacteria 31757
77 Ga0501083_0000405 3300049744 Bacteria 27489
78 Ga0501083_0010285 3300049744 Bacteria 6592
79 Ga0501035_0008211 3300049822 Bacteria 9731
80 Ga0501035_0035907 3300049822 Bacteria 4496
81 Ga0501035_0085911 3300049822 Bacteria 2772
82 Ga0501044_0011103 3300049823 Bacteria 9770
83 Ga0500635_0000056 3300053080 Bacteria 73518
84 Ga0500559_0005528 3300053136 Bacteria 5806
85 Ga0500573_0003613 3300053140 Bacteria 8025

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048928 Ga0496125_0000480 Ga0496125_0000480_78_2246 619
2 3300048920 Ga0496117_0006067 Ga0496117_0006067_7549_9864 658
3 3300048921 Ga0496118_0005171 Ga0496118_0005171_10358_12673 658
4 3300048925 Ga0496122_0001203 Ga0496122_0001203_35809_38124 665
5 3300048926 Ga0496123_0000009 Ga0496123_0000009_268410_270725 665
6 3300048927 Ga0496124_0014698 Ga0496124_0014698_4363_6678 665
7 3300048908 Ga0496105_0039801 Ga0496105_0039801_560_2875 677
8 3300003760 Ga0055527_1000025 Ga0055527_1000025139 679
9 3300003762 Ga0055542_1000048 Ga0055542_1000048139 679
10 3300003763 Ga0055529_1000057 Ga0055529_100005742 679
11 3300025228 Ga0209672_100011 Ga0209672_100011797 679
12 3300025229 Ga0209147_100317 Ga0209147_10031727 679
13 3300025254 Ga0209148_1000023 Ga0209148_1000023635 679
14 3300025272 Ga0209455_1000023 Ga0209455_1000023635 679
15 3300037418 Ga0395900_0001829 Ga0395900_0001829_7189_9507 680
16 3300037466 Ga0395898_0000100 Ga0395898_0000100_120221_122539 680
17 3300048925 Ga0496122_0000846 Ga0496122_0000846_44442_46670 684
18 3300013307 Ga0157372_10088779 Ga0157372_100887792 692
19 3300037418 Ga0395900_0007448 Ga0395900_0007448_6959_9217 692
20 3300021388 Ga0213875_10000243 Ga0213875_1000024311 693
21 3300037312 Ga0395899_0003505 Ga0395899_0003505_4888_7149 693
22 3300037853 Ga0436364_0050479 Ga0436364_0050479_41899_44316 693
23 3300041452 Ga0451793_0337335 Ga0451793_0337335_932_3226 693
24 3300048920 Ga0496117_0007513 Ga0496117_0007513_2940_5408 693
25 3300048921 Ga0496118_0002591 Ga0496118_0002591_6401_8869 693
26 3300048922 Ga0496119_0032418 Ga0496119_0032418_834_3149 693
27 3300048925 Ga0496122_0013206 Ga0496122_0013206_2669_5137 693
28 3300048926 Ga0496123_0005824 Ga0496123_0005824_5384_7852 693
29 3300048927 Ga0496124_0000234 Ga0496124_0000234_69142_71610 693
30 3300013250 Ga0171462_1001 Ga0171462_1001961 695
31 3300025728 Ga0207655_1010949 Ga0207655_10109494 696
32 3300003752 Ga0055539_1000135 Ga0055539_100013562 697
33 3300003756 Ga0055533_1000002 Ga0055533_100000223 697
34 3300003759 Ga0055525_1000303 Ga0055525_100030324 697
35 3300025225 Ga0209566_100032 Ga0209566_10003223 697
36 3300025226 Ga0209674_100001 Ga0209674_1000013543 697
37 3300025230 Ga0209563_100001 Ga0209563_1000013543 697
38 3300025253 Ga0209677_100001 Ga0209677_1000013543 697
39 iso_pu_bacteria 2808606368 2808884689 697
40 iso_pu_bacteria 2857720070 2857721893 697
41 3300013105 Ga0157369_10015715 Ga0157369_100157154 698
42 3300053140 Ga0500573_0003613 Ga0500573_0003613_3281_5584 699
43 3300049586 Ga0501070_0000664 Ga0501070_0000664_19808_22120 700
44 3300049822 Ga0501035_0085911 Ga0501035_0085911_50_2362 700
45 3300025230 Ga0209563_100969 Ga0209563_1009692 701
46 3300031901 Ga0307406_10000005 Ga0307406_1000000515 701
47 3300044658 Ga0466972_0009055 Ga0466972_0009055_2387_4711 701
48 3300045049 Ga0466959_0006327 Ga0466959_0006327_1447_3771 701
49 3300048920 Ga0496117_0024489 Ga0496117_0024489_1209_3491 702
50 3300049569 Ga0501032_0004955 Ga0501032_0004955_2468_4783 703
51 iso_pu_bacteria 2946041624 2946043282 704
52 iso_pu_bacteria 8056037122 8056040686 705
53 3300020082 Ga0206353_11015650 Ga0206353_110156501 706
54 3300025253 Ga0209677_103246 Ga0209677_1032464 706
55 iso_pu_bacteria 2808606447 2809225300 706
56 iso_pu_bacteria 2852632344 2852633885 706
57 3300013105 Ga0157369_10038107 Ga0157369_100381073 707
58 3300044765 Ga0466970_0014511 Ga0466970_0014511_496_2820 707
59 3300048920 Ga0496117_0015761 Ga0496117_0015761_4049_6373 707
60 iso_pu_bacteria 2808606306 2808628870 707
61 iso_pu_bacteria 2844841374 2844845205 707
62 iso_pu_bacteria 2919055335 2919056997 707
63 iso_pu_bacteria 2919523602 2919527055 707
64 iso_pu_bacteria 2928153084 2928154753 707
65 iso_pu_bacteria 2844852863 2844856176 708
66 iso_pu_bacteria 2920879853 2920880066 708
67 iso_pu_bacteria 2799112218 2799184614 710
68 3300048925 Ga0496122_0014656 Ga0496122_0014656_3425_5893 711
69 3300048926 Ga0496123_0007170 Ga0496123_0007170_4675_7143 711
70 3300048927 Ga0496124_0001171 Ga0496124_0001171_36935_39403 711
71 3300044765 Ga0466970_0029057 Ga0466970_0029057_30_2438 712
72 3300045976 Ga0466967_0018755 Ga0466967_0018755_2565_4973 712
73 3300053080 Ga0500635_0000056 Ga0500635_0000056_57207_59582 713
74 3300048927 Ga0496124_0002072 Ga0496124_0002072_1710_4184 716
75 iso_pu_bacteria 2852646457 2852646607 718
76 3300037418 Ga0395900_0021895 Ga0395900_0021895_159_2624 722
77 iso_pu_bacteria 2945968032 2945970981 722
78 3300053136 Ga0500559_0005528 Ga0500559_0005528_832_3192 727
79 iso_pu_bacteria 2811994878 2812351806 727
80 3300049570 Ga0501033_0044415 Ga0501033_0044415_837_3269 728
81 3300049744 Ga0501083_0010285 Ga0501083_0010285_3451_5883 728
82 iso_pu_bacteria 2751185788 2753300998 728
83 iso_pu_bacteria 2928104781 2928106449 728
84 3300048929 Ga0496126_0013917 Ga0496126_0013917_1549_3972 729
85 iso_pu_bacteria 2919042368 2919044855 729
86 iso_pu_bacteria 2643221546 2643753001 730
87 iso_pu_bacteria 2906799679 2906803333 730
88 3300044765 Ga0466970_0003172 Ga0466970_0003172_4276_6834 732
89 3300048922 Ga0496119_0021667 Ga0496119_0021667_1144_3555 732
90 iso_pu_bacteria 2904430863 2904431104 732
91 iso_pu_bacteria 2904501621 2904504548 732
92 iso_pu_bacteria 2908674828 2908675025 732
93 iso_pu_bacteria 2909074476 2909075653 732
94 iso_pu_bacteria 2919039151 2919039708 732
95 iso_pu_bacteria 2928500415 2928500725 732
96 3300049571 Ga0501034_0031925 Ga0501034_0031925_1770_4193 733
97 3300049572 Ga0501036_0005698 Ga0501036_0005698_1937_4360 733
98 3300049574 Ga0501038_0000969 Ga0501038_0000969_11037_13460 733
99 3300049578 Ga0501042_0035053 Ga0501042_0035053_75_2525 733
100 3300049581 Ga0501047_0005656 Ga0501047_0005656_4332_6755 733
101 3300049822 Ga0501035_0008211 Ga0501035_0008211_5553_7976 733
102 3300049823 Ga0501044_0011103 Ga0501044_0011103_3472_5895 733
103 iso_pu_bacteria 2946033335 2946036152 733
104 iso_pu_bacteria 2739367654 2739608315 734
105 iso_pu_bacteria 2738543027 2739327222 737
106 iso_pu_bacteria 2758568621 2760625824 737
107 iso_pu_bacteria 2835188231 2835191421 737
108 3300049570 Ga0501033_0035807 Ga0501033_0035807_1238_3664 738
109 3300049744 Ga0501083_0000405 Ga0501083_0000405_18656_21082 738
110 iso_pu_bacteria 2738541272 2738695055 738
111 iso_pu_bacteria 2758568522 2760305666 738
112 iso_pu_bacteria 2808606394 2809030853 739
113 iso_pu_bacteria 2839986021 2839986213 739
114 iso_pu_bacteria 2984551494 2984553153 739
115 iso_pu_bacteria 8056579771 8056581894 739
116 3300005337 Ga0070682_100019374 Ga0070682_1000193743 741
117 3300013105 Ga0157369_10000225 Ga0157369_1000022522 742
118 iso_pu_bacteria 2643221616 2644094813 742
119 iso_pu_bacteria 2643221632 2644181182 743
120 iso_pu_bacteria 2884763398 2884764172 745
121 iso_pu_bacteria 2932431166 2932432521 745
122 3300049571 Ga0501034_0021194 Ga0501034_0021194_809_3232 747
123 3300049822 Ga0501035_0035907 Ga0501035_0035907_801_3224 747
124 3300002772 JGI25164J39214_1000209 JGI25164J39214_100020910 749
125 3300003214 JGI25165J46597_1000125 JGI25165J46597_1000125102 749
126 3300025231 Ga0207427_100039 Ga0207427_100039149 749
127 3300025233 Ga0209437_100471 Ga0209437_10047110 749
128 3300025261 Ga0209233_1000014 Ga0209233_1000014369 749

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF14310

Fn3-like

Fibronectin type III-like domain

722

791

0.97

PF00933

Glyco_hydro_3

Glycosyl hydrolase family 3 N terminal domain

62

390

0.95

PF01915

Glyco_hydro_3_C

Glycosyl hydrolase family 3 C-terminal domain

429

686

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
7zdy-assembly1.cif.gz_W crystal structure of beta-xylosidase from thermotoga maritima in complex with methyl-beta-d-xylopyranoside 0.8446 7 738
7zdy-assembly1.cif.gz_Y crystal structure of beta-xylosidase from thermotoga maritima in complex with methyl-beta-d-xylopyranoside 0.8412 7 738
7zeq-assembly1.cif.gz_Y apo crystal structure of beta-xylosidase from thermotoga maritima 0.8379 7 739
7zeq-assembly1.cif.gz_X apo crystal structure of beta-xylosidase from thermotoga maritima 0.8342 7 739
7zb3-assembly1.cif.gz_A crystal structure of beta-xylosidase from thermotoga maritima in complex with xylohexaose hydrolysed to xylobiose 0.8333 7 739
ID Description Score Start End Superfamily
af_A0A0R0K4H0_93_293_3.40.50.1700 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycoside hydrolase family 3 C-terminal domain 0.8672 344 564 3.40.50.1700
af_A0A0P0Y573_257_505_3.40.50.1700 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycoside hydrolase family 3 C-terminal domain 0.865 346 562 3.40.50.1700
5jp0B03 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.8531 603 676 2.60.40.10
4i3gB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycoside hydrolase family 3 C-terminal domain 0.8483 343 564 3.40.50.1700
af_A0A0R0K4H0_93_293_3.40.50.1700 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycoside hydrolase family 3 C-terminal domain 0.8386 344 564 3.40.50.1700
ID Description Score Start End GO Terms
AF-A0A060BZK8-F1-model_v4 Glyco_hydro_3 0.959 193 329 GO:0009044
GO:0031222
GO:0045493
GO:0046556
AF-A0A6B2XNN1-F1-model_v4 Glycosyl hydrolase 0.956 173 291 GO:0009044
GO:0031222
GO:0045493
GO:0046556
AF-A0A820PXB0-F1-model_v4 beta-glucosidase (EC 3.2.1.21) 0.9547 173 286 GO:0008422
GO:0009251
AF-A0A074UED9-F1-model_v4 deleted 0.9429 173 289
AF-A0A820I2J5-F1-model_v4 beta-glucosidase (EC 3.2.1.21) 0.9233 185 323 GO:0008422
GO:0009251

Feature Viewer

pLDDT pTM Quality
81.03 0.84 High
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Predicted Structure (AlphaFold2)

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