F139513

General Info

Members Datasets Scaffolds Average Seq Length
128 105 79 553

Family's Representative Sequence

Representative Sequence 3300049570|Ga0501033_0028146|Ga0501033_0028146_2191_3867
Length 558
Sequence VNLWLFLAQFATLAVILGLVYRPLGDYMAHTFTTTRDLGLERGFYRLIGVRSDAAQSWPAYLRGVLAFSVVGVFFVYILQRVQEWLPYALGLPNVPPGLAFNTAISFMTNTNWQSYSPELTLGYTVQFAGLAVQNFVSAAVGIAVAIALVRGFALRKSGTIGNFWVDLTRSVTRILLPIAIVGSVVLIAGGVIQNFNQVETVHTIAGGVQHLPGGPTTSQEVIKELGTNGGGFFNMNSAHPFENPTAWTSLFEVFLMLLIPFALPRTFGRIVGDNRQGYAILAAMGVLFTASLVAGTLFELHGGGDSAIAAAGGAMEGKEQRLGIIGSLLFDTTGTSTSTGAVASMHDSMTSFGGMMMIINMMLGEVSPGGVGTGLYGMLVMAIVAVFLAGLMIGRTPEYLGKKIAAREIKLASLYFLTTPTLVLVGLALSFAIPPITHDLEHTSMWNPGQHGYSEVLYAFTSAANNNGSAFAGITANTPWLNASLGAAMFLGRLLPIAFVLALAGSLAAQDRIPVTTATLPTHRPQFVGLLIGTVLLVSALTYFPVLALGPIAEGLH

Samples

Sample ID Description Type Environment
1 2585428157 Microbacterium sp. CF335 Isolate Rhizosphere
2 2643221542 Microbacterium sp. Root1433D1 Isolate Unclassified
3 2643221553 Microbacterium sp. Root553 Isolate Unclassified
4 2643221597 Microbacterium sp. Root180 Isolate Unclassified
5 2643221630 Microbacterium sp. Root322 Isolate Unclassified
6 2643221724 Microbacterium sp. Root280D1 Isolate Unclassified
7 2721755702 Agromyces sp. AR33 Isolate Rhizosphere
8 2728369380 Microbacterium sp. 1.5R Isolate Rhizosphere
9 2747842429 Microbacterium sp. WCS2014-259 Isolate Unclassified
10 2757320536 Microbacterium sp. NFIX05 Isolate Unclassified
11 2773857758 Microbacterium chocolatum 1320 Isolate Unclassified
12 2773857759 Microbacterium sp. 1294 Isolate Unclassified
13 2808606306 Microbacterium sp. SLBN-146 Isolate Unclassified
14 2808606447 Microbacterium sp. HAR-UPW-R2A-48 Isolate Unclassified
15 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
16 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
17 2852632344 Microbacterium sp. AK009 Isolate Rhizosphere
18 2852663356 Microbacterium sp. JAI119 Isolate Rhizosphere
19 2852677369 Pseudoclavibacter sp. JAI123 Isolate Rhizosphere
20 2857720070 Microbacterium sp. R-72113 Isolate Unclassified
21 2857723135 Microbacterium sp. R-72356 Isolate Unclassified
22 2857727296 Kocuria sp. R-72562 Isolate Unclassified
23 2857729791 Plantibacter sp. R-72288 Isolate Unclassified
24 2904509784 Microbacterium sp. 1676 Isolate Rhizosphere
25 2908678064 Microbacterium sp. 1518 Isolate Rhizosphere
26 2919055335 Leifsonia sp. 1010 Isolate Rhizosphere
27 2919069694 Microbacterium sp. 1154 Isolate Unclassified
28 2919523602 Leifsonia shinshuensis 3821 Isolate Unclassified
29 2928090899 Microbacterium sp. 1262 Isolate Rhizosphere
30 2928121344 Plantibacter flavus 1756 Isolate Rhizosphere
31 2928153084 Leifsonia sp. 563 Isolate Unclassified
32 2932431166 Cellulosimicrobium sp. 4261 Isolate Rhizosphere
33 2935409751 Agromyces sp. PvR057 Isolate Rhizosphere
34 2939657138 Conyzicola nivalis 2857 Isolate Rhizosphere
35 2945968032 Microbacterium murale W2I7 Isolate Rhizosphere
36 2966924647 Frigoribacterium sp. 2355 Isolate Rhizosphere
37 2974294766 Microbacterium proteolyticum SORGH_AS 209 Isolate Unclassified
38 2974324384 Microbacterium sp. SORGH_AS 344 Isolate Unclassified
39 2977228692 Microbacterium sp. SORGH_AS 421 Isolate Unclassified
40 2977236895 Microbacterium testaceum SORGH_AS 426 Isolate Unclassified
41 2977251589 Microbacterium sp. SORGH_AS 505 Isolate Unclassified
42 2977264416 Microbacterium testaceum SORGH_AS 594 Isolate Unclassified
43 2984580707 Microbacterium paludicola SORGH_AS919 Isolate Aerial Root
44 2995726249 Leucobacter zeae CC-MF41 Isolate Rhizosphere
45 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
46 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
47 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
48 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
49 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
50 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
51 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
52 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
53 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
54 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
55 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
56 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
57 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
58 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
65 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
66 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
67 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
68 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
69 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
70 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
71 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
72 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
73 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
74 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
75 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
76 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
77 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
78 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
79 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
80 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
81 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
82 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
83 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
84 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
85 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
86 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
87 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
88 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
89 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
90 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
91 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
92 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
93 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
94 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
95 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
96 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
97 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
98 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
99 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
100 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
101 8016254467 Microbacterium sp. SLBN-111 (version 3) Isolate Rhizosphere
102 8055034563 Leucobacter allii H21R-40 Isolate Rhizosphere
103 8055037949 Leucobacter rhizosphaerae H25R-14 Isolate Rhizosphere
104 8057345674 Herbiconiux aconitum CPCC 205763 Isolate Rhizosphere
105 8057568493 Actinorhabdospora filicis NBRC 111898 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 61.72
Metatranscriptomes 0
Isolates 38.28

Biome Distribution

Category Percentage (%)
Aerial Root 0.78
Bulb 0
Endosphere 13.28
Nodule 0
Rhizoplane 7.81
Rhizosphere 39.84
Stem 0
Stem Tuber 0
Unclassified 38.28

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10018962 3300001979 Bacteria 2431
2 JGI24735J21928_10000186 3300002067 Bacteria 22134
3 Ga0055539_1000083 3300003752 Bacteria 121281
4 Ga0055533_1000037 3300003756 Bacteria 255573
5 Ga0055525_1000300 3300003759 Bacteria 41688
6 Ga0065714_10088726 3300005288 Bacteria 2005
7 Ga0075365_10013684 3300006038 Bacteria 4864
8 Ga0075367_10002827 3300006178 Bacteria 8062
9 Ga0105244_10017168 3300009036 Bacteria 4100
10 Ga0105248_10073304 3300009177 Bacteria 3848
11 Ga0157369_10117603 3300013105 Bacteria 2822
12 Ga0163162_10120449 3300013306 Bacteria 2728
13 Ga0163163_10015201 3300014325 Bacteria 7109
14 Ga0209566_100047 3300025225 Bacteria 243995
15 Ga0209674_100001 3300025226 Bacteria 4013750
16 Ga0209563_100001 3300025230 Bacteria 4013775
17 Ga0209563_101079 3300025230 Bacteria 7867
18 Ga0209677_100001 3300025253 Bacteria 4013787
19 Ga0207647_10002144 3300025904 Bacteria 15079
20 Ga0207674_10136776 3300026116 Bacteria 2412
21 Ga0307406_10000031 3300031901 Bacteria 87391
22 Ga0451837_1854562 3300041494 Bacteria 2647
23 Ga0466972_0008570 3300044658 Bacteria 5131
24 Ga0466972_0017706 3300044658 Bacteria 3565
25 Ga0466961_0036715 3300044693 Bacteria 3145
26 Ga0466960_0009763 3300044901 Bacteria 3968
27 Ga0466959_0098164 3300045049 Bacteria 2098
28 Ga0495627_004256 3300046453 Bacteria 6041
29 Ga0495629_0054121 3300046459 Bacteria 2807
30 Ga0496104_0007235 3300048907 Bacteria 9794
31 Ga0496105_0011093 3300048908 Bacteria 7105
32 Ga0496105_0037248 3300048908 Bacteria 4005
33 Ga0496105_0047894 3300048908 Bacteria 3527
34 Ga0496112_0219217 3300048915 Bacteria 1859
35 Ga0496114_0044976 3300048917 Bacteria 3665
36 Ga0496114_0050145 3300048917 Bacteria 3474
37 Ga0496114_0051191 3300048917 Bacteria 3438
38 Ga0496114_0203620 3300048917 Bacteria 1734
39 Ga0496115_0104770 3300048918 Bacteria 2321
40 Ga0496117_0000014 3300048920 Bacteria 584427
41 Ga0496117_0000071 3300048920 Bacteria 242170
42 Ga0496117_0005863 3300048920 Bacteria 12703
43 Ga0496117_0054130 3300048920 Bacteria 2813
44 Ga0496117_0093688 3300048920 Bacteria 1925
45 Ga0496118_0026282 3300048921 Bacteria 4964
46 Ga0496119_0003016 3300048922 Bacteria 17825
47 Ga0496119_0006676 3300048922 Bacteria 10613
48 Ga0496119_0015870 3300048922 Bacteria 5767
49 Ga0496120_0002041 3300048923 Bacteria 21859
50 Ga0496120_0029763 3300048923 Bacteria 3330
51 Ga0496122_0001035 3300048925 Bacteria 48821
52 Ga0496122_0003426 3300048925 Bacteria 20874
53 Ga0496122_0005723 3300048925 Bacteria 14653
54 Ga0496122_0007211 3300048925 Bacteria 12442
55 Ga0496122_0027460 3300048925 Bacteria 4865
56 Ga0496123_0000351 3300048926 Bacteria 86447
57 Ga0496123_0001666 3300048926 Bacteria 29767
58 Ga0496124_0000321 3300048927 Bacteria 88675
59 Ga0496124_0033470 3300048927 Bacteria 4521
60 Ga0496125_0003686 3300048928 Bacteria 18298
61 Ga0496125_0021403 3300048928 Bacteria 6033
62 Ga0496126_0020079 3300048929 Bacteria 6560
63 Ga0501033_0028146 3300049570 Bacteria 4224
64 Ga0501034_0025326 3300049571 Bacteria 6040
65 Ga0501036_0135251 3300049572 Bacteria 2081
66 Ga0501042_0001291 3300049578 Bacteria 14594
67 Ga0501043_0073477 3300049579 Bacteria 2686
68 Ga0501073_0000075 3300049589 Bacteria 61808
69 Ga0501074_0022941 3300049590 Bacteria 4539
70 Ga0501074_0099361 3300049590 Bacteria 2083
71 Ga0501080_0017600 3300049742 Bacteria 6607
72 Ga0501080_0055117 3300049742 Bacteria 3703
73 nmdc:mga00v17_21474_c1 3300050491 Bacteria 3051
74 Ga0500650_0008939 3300053098 Bacteria 3992
75 Ga0500556_0000129 3300053104 Bacteria 64921
76 Ga0500593_000501 3300053117 Bacteria 15491
77 Ga0500655_004566 3300053133 Bacteria 2492
78 Ga0500559_0000158 3300053136 Bacteria 53298
79 Ga0500616_0000233 3300053153 Bacteria 87378

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048923 Ga0496120_0029763 Ga0496120_0029763_1922_3313 463
2 3300048915 Ga0496112_0219217 Ga0496112_0219217_14_1558 484
3 3300041494 Ga0451837_1854562 Ga0451837_1854562_39_1496 485
4 3300048918 Ga0496115_0104770 Ga0496115_0104770_812_2293 493
5 3300044901 Ga0466960_0009763 Ga0466960_0009763_1182_2855 526
6 3300048929 Ga0496126_0020079 Ga0496126_0020079_41_1714 532
7 3300049578 Ga0501042_0001291 Ga0501042_0001291_8480_10177 536
8 3300049589 Ga0501073_0000075 Ga0501073_0000075_32014_33687 536
9 3300049742 Ga0501080_0055117 Ga0501080_0055117_1009_2682 536
10 3300046459 Ga0495629_0054121 Ga0495629_0054121_279_1943 540
11 3300009177 Ga0105248_10073304 Ga0105248_100733042 541
12 3300014325 Ga0163163_10015201 Ga0163163_100152013 541
13 3300026116 Ga0207674_10136776 Ga0207674_101367764 541
14 3300048907 Ga0496104_0007235 Ga0496104_0007235_457_2121 541
15 3300048908 Ga0496105_0037248 Ga0496105_0037248_313_1977 541
16 iso_pu_bacteria 8057568493 8057572794 545
17 3300006038 Ga0075365_10013684 Ga0075365_100136846 549
18 3300049571 Ga0501034_0025326 Ga0501034_0025326_3755_5428 551
19 3300006178 Ga0075367_10002827 Ga0075367_100028277 552
20 3300053104 Ga0500556_0000129 Ga0500556_0000129_56525_58213 552
21 3300053117 Ga0500593_000501 Ga0500593_000501_12223_13911 552
22 3300053133 Ga0500655_004566 Ga0500655_004566_258_1946 552
23 iso_pu_bacteria 2857727296 2857728209 552
24 iso_pu_bacteria 2721755702 2723640367 553
25 iso_pu_bacteria 2773857759 2774382898 553
26 iso_pu_bacteria 2844841374 2844843517 553
27 iso_pu_bacteria 2857729791 2857731427 553
28 iso_pu_bacteria 2928121344 2928122020 553
29 iso_pu_bacteria 2932431166 2932432457 553
30 iso_pu_bacteria 2935409751 2935409908 553
31 iso_pu_bacteria 2939657138 2939658872 553
32 iso_pu_bacteria 2966924647 2966927469 553
33 iso_pu_bacteria 2977251589 2977253077 553
34 iso_pu_bacteria 2995726249 2995728619 553
35 iso_pu_bacteria 8055034563 8055035819 553
36 iso_pu_bacteria 8055037949 8055039250 553
37 iso_pu_bacteria 2928153084 2928154128 554
38 iso_pu_bacteria 2643221542 2643734331 555
39 iso_pu_bacteria 2643221630 2644172448 555
40 iso_pu_bacteria 2852663356 2852666409 555
41 iso_pu_bacteria 2857723135 2857725637 555
42 iso_pu_bacteria 2945968032 2945970131 555
43 3300031901 Ga0307406_10000031 Ga0307406_100000316 556
44 3300044658 Ga0466972_0008570 Ga0466972_0008570_11_1684 556
45 3300045049 Ga0466959_0098164 Ga0466959_0098164_397_2070 556
46 3300048920 Ga0496117_0000014 Ga0496117_0000014_106073_107743 556
47 3300048925 Ga0496122_0001035 Ga0496122_0001035_11321_12991 556
48 3300048926 Ga0496123_0000351 Ga0496123_0000351_59508_61178 556
49 3300048927 Ga0496124_0000321 Ga0496124_0000321_58330_60000 556
50 3300049590 Ga0501074_0099361 Ga0501074_0099361_294_1967 556
51 iso_pu_bacteria 2585428157 2588107085 556
52 iso_pu_bacteria 2643221597 2643997423 556
53 iso_pu_bacteria 2757320536 2758225163 556
54 iso_pu_bacteria 2773857758 2774379274 556
55 iso_pu_bacteria 2808606447 2809225745 556
56 iso_pu_bacteria 2811994872 2812325270 556
57 iso_pu_bacteria 2852632344 2852635382 556
58 iso_pu_bacteria 2852677369 2852678082 556
59 iso_pu_bacteria 2857720070 2857721581 556
60 iso_pu_bacteria 2904509784 2904513095 556
61 iso_pu_bacteria 2908678064 2908679688 556
62 iso_pu_bacteria 2919069694 2919070346 556
63 iso_pu_bacteria 2928090899 2928093311 556
64 iso_pu_bacteria 2974294766 2974295311 556
65 iso_pu_bacteria 2974324384 2974324886 556
66 iso_pu_bacteria 2977228692 2977229899 556
67 iso_pu_bacteria 2977236895 2977238060 556
68 iso_pu_bacteria 2984580707 2984583043 556
69 iso_pu_bacteria 8016254467 8016255525 556
70 iso_pu_bacteria 8057345674 8057346180 556
71 3300001979 JGI24740J21852_10018962 JGI24740J21852_100189623 557
72 3300002067 JGI24735J21928_10000186 JGI24735J21928_1000018616 557
73 3300003752 Ga0055539_1000083 Ga0055539_100008333 557
74 3300003756 Ga0055533_1000037 Ga0055533_1000037158 557
75 3300003759 Ga0055525_1000300 Ga0055525_100030015 557
76 3300005288 Ga0065714_10088726 Ga0065714_100887262 557
77 3300009036 Ga0105244_10017168 Ga0105244_100171682 557
78 3300013105 Ga0157369_10117603 Ga0157369_101176032 557
79 3300013306 Ga0163162_10120449 Ga0163162_101204492 557
80 3300025225 Ga0209566_100047 Ga0209566_100047114 557
81 3300025226 Ga0209674_100001 Ga0209674_1000012307 557
82 3300025230 Ga0209563_100001 Ga0209563_1000012307 557
83 3300025230 Ga0209563_101079 Ga0209563_1010796 557
84 3300025253 Ga0209677_100001 Ga0209677_1000012307 557
85 3300025904 Ga0207647_10002144 Ga0207647_100021449 557
86 3300044658 Ga0466972_0017706 Ga0466972_0017706_939_2627 557
87 3300044693 Ga0466961_0036715 Ga0466961_0036715_933_2606 557
88 3300046453 Ga0495627_004256 Ga0495627_004256_2790_4469 557
89 3300048908 Ga0496105_0011093 Ga0496105_0011093_1785_3467 557
90 3300048908 Ga0496105_0047894 Ga0496105_0047894_855_2528 557
91 3300048917 Ga0496114_0044976 Ga0496114_0044976_913_2586 557
92 3300048917 Ga0496114_0050145 Ga0496114_0050145_1009_2691 557
93 3300048917 Ga0496114_0051191 Ga0496114_0051191_415_2100 557
94 3300048917 Ga0496114_0203620 Ga0496114_0203620_20_1705 557
95 3300048920 Ga0496117_0000071 Ga0496117_0000071_25994_27676 557
96 3300048920 Ga0496117_0005863 Ga0496117_0005863_2855_4549 557
97 3300048920 Ga0496117_0054130 Ga0496117_0054130_149_1831 557
98 3300048920 Ga0496117_0093688 Ga0496117_0093688_31_1719 557
99 3300048921 Ga0496118_0026282 Ga0496118_0026282_2472_4154 557
100 3300048922 Ga0496119_0003016 Ga0496119_0003016_14140_15825 557
101 3300048922 Ga0496119_0006676 Ga0496119_0006676_252_1946 557
102 3300048922 Ga0496119_0015870 Ga0496119_0015870_2795_4477 557
103 3300048923 Ga0496120_0002041 Ga0496120_0002041_19891_21576 557
104 3300048925 Ga0496122_0003426 Ga0496122_0003426_6108_7790 557
105 3300048925 Ga0496122_0005723 Ga0496122_0005723_3995_5674 557
106 3300048925 Ga0496122_0007211 Ga0496122_0007211_4386_6068 557
107 3300048925 Ga0496122_0027460 Ga0496122_0027460_927_2606 557
108 3300048926 Ga0496123_0001666 Ga0496123_0001666_2729_4411 557
109 3300048927 Ga0496124_0033470 Ga0496124_0033470_2799_4481 557
110 3300048928 Ga0496125_0003686 Ga0496125_0003686_13682_15364 557
111 3300048928 Ga0496125_0021403 Ga0496125_0021403_2289_3968 557
112 3300049570 Ga0501033_0028146 Ga0501033_0028146_2191_3867 557
113 3300049572 Ga0501036_0135251 Ga0501036_0135251_69_1745 557
114 3300049579 Ga0501043_0073477 Ga0501043_0073477_696_2372 557
115 3300049590 Ga0501074_0022941 Ga0501074_0022941_1166_2842 557
116 3300049742 Ga0501080_0017600 Ga0501080_0017600_860_2536 557
117 3300050491 nmdc:mga00v17_21474_c1 nmdc:mga00v17_21474_c1_320_2017 557
118 3300053098 Ga0500650_0008939 Ga0500650_0008939_709_2382 557
119 3300053136 Ga0500559_0000158 Ga0500559_0000158_3750_5429 557
120 3300053153 Ga0500616_0000233 Ga0500616_0000233_51012_52685 557
121 iso_pu_bacteria 2643221553 2643784115 557
122 iso_pu_bacteria 2643221724 2644678719 557
123 iso_pu_bacteria 2728369380 2730228222 557
124 iso_pu_bacteria 2747842429 2747955138 557
125 iso_pu_bacteria 2808606306 2808629502 557
126 iso_pu_bacteria 2919055335 2919055996 557
127 iso_pu_bacteria 2919523602 2919525908 557
128 iso_pu_bacteria 2977264416 2977265136 557

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03814

KdpA

Potassium-transporting ATPase A subunit

11

557

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
7nnl-assembly1.cif.gz_A cryo-em structure of the kdpfabc complex in an e1-atp conformation loaded with k+ 0.8452 1 557
5mrw-assembly2.cif.gz_E structure of the kdpfabc complex 0.8447 1 557
7nnp-assembly1.cif.gz_A rb-loaded cryo-em structure of the e1-atp kdpfabc complex. 0.8412 1 557
7zp9-assembly1.cif.gz_I ktrab complex - ktra8 ring with a ktrb dimer on each side 0.7162 61 504
7zp9-assembly1.cif.gz_I ktrab complex - ktra8 ring with a ktrb dimer on each side 0.6715 61 504
ID Description Score Start End Superfamily
af_Q22940_41_396_1.10.287.70 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.467 388 506 1.10.287.70
af_A1Z8N9_294_443_1.10.287.70 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.3735 409 517 1.10.287.70
af_Q9GYM8_217_335_1.10.287.70 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.3603 383 507 1.10.287.70
af_Q9GYM8_217_335_1.10.287.70 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.3479 383 507 1.10.287.70
af_Q9R283_623_931_1.20.120.350 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Voltage-gated potassium channels. Chain C 0.3355 278 508 1.20.120.350
ID Description Score Start End GO Terms
AF-A0A6N9YE50-F1-model_v4 deleted 0.9713 30 191
AF-A0A6I5E2Z9-F1-model_v4 deleted 0.9604 7 189
AF-A0A6B3H802-F1-model_v4 Potassium-transporting ATPase subunit KdpA 0.9555 376 514 GO:0005886
GO:0008556
AF-A0A6G3WNZ8-F1-model_v4 Potassium-transporting ATPase subunit KdpA 0.9551 7 186 GO:0005886
GO:0008556
AF-A0A6G3VCE4-F1-model_v4 deleted 0.9545 54 130

Feature Viewer

pLDDT pTM Quality
78.69 0.86 High
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Predicted Structure (AlphaFold2)

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