F139060

General Info

Members Datasets Scaffolds Average Seq Length
128 94 256 153

Family's Representative Sequence

Representative Sequence 3300044765|Ga0466970_0016411|Ga0466970_0016411_1784_2311
Length 175
Sequence MPNTAATLEALARSRYALLRSLRRDGTTVDTPIWFVLDGRTALFRTKIGPKTRRLAAQPEVELVVCDYKGRVTGTTWLTGRATMLAGREAEQANSALHRRYGWQWNIVPLLKIPGVTNVHRDLPLREKLRRARHRALWPDSAIVKIELDVQPRQPGPSNALRSPISADDGVTRSD

Samples

Sample ID Description Type Environment
1 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
2 3300000546 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled Metagenome Rhizosphere
3 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
11 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
12 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
13 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
14 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
15 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
16 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
17 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
18 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
19 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
20 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
21 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
22 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
23 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
24 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
25 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
26 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
27 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
28 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
29 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
30 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
31 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
32 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
41 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
42 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
43 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
44 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
45 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
46 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
47 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
48 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
49 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
50 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
51 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
52 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
53 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
54 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
55 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
56 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
57 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
58 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
59 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
60 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
61 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
62 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
63 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
64 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
65 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
66 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
67 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
68 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
69 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
70 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
71 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
72 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
73 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
74 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
75 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
76 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
77 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
78 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
79 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
80 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
81 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
82 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
83 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
84 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
85 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
86 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
87 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
88 2643221687 Mycobacterium sp. Root135 Isolate Unclassified
89 2643221715 Mycobacterium sp. Root265 Isolate Unclassified
90 2738541274 Mycobacterium sp. YR708 Isolate Unclassified
91 2738543028 Mycobacterium sp. YR782 Isolate Unclassified
92 2902799365 Mycolicibacterium sp. P1-5 Isolate Unclassified
93 2902810491 Mycolicibacterium sp. P9-22 Isolate Unclassified
94 2939582691 Mycolicibacterium sp. 624 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.53
Metatranscriptomes 0
Isolates 5.47

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 30.47
Nodule 0
Rhizoplane 4.69
Rhizosphere 55.47
Stem 0
Stem Tuber 0
Unclassified 3.12

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466970_0016411 3300044765 Bacteria 3818
2 LJNas_1024360 3300000546 Bacteria 646
3 JGI24034J26672_10016201 3300002239 Bacteria 1146
4 Ga0070670_100123723 3300005331 Bacteria 2232
5 Ga0070666_10863200 3300005335 Bacteria 668
6 Ga0070682_100065035 3300005337 Bacteria 2317
7 Ga0070668_101577481 3300005347 Bacteria 601
8 Ga0070709_10467991 3300005434 Bacteria 952
9 Ga0070714_100254242 3300005435 Bacteria 1625
10 Ga0070711_100844928 3300005439 Bacteria 779
11 Ga0070698_101509362 3300005471 Unclassified 623
12 Ga0068860_100051677 3300005843 Bacteria 3910
13 Ga0068862_100280799 3300005844 Bacteria 1526
14 Ga0081455_10018036 3300005937 Bacteria 6740
15 Ga0081455_10053111 3300005937 Bacteria 3464
16 Ga0081538_10173750 3300005981 Bacteria 935
17 Ga0081540_1211370 3300005983 Bacteria 697
18 Ga0075365_10007534 3300006038 Bacteria 6108
19 Ga0075363_100058461 3300006048 Bacteria 2071
20 Ga0075363_100081637 3300006048 Bacteria 1769
21 Ga0075364_10034640 3300006051 Bacteria 3259
22 Ga0075364_10161999 3300006051 Bacteria 1510
23 Ga0075364_10959653 3300006051 Bacteria 582
24 Ga0075367_10349898 3300006178 Bacteria 932
25 Ga0075367_10599108 3300006178 Unclassified 700
26 Ga0075369_10048379 3300006186 Bacteria 1835
27 Ga0075369_10132878 3300006186 Bacteria 1132
28 Ga0075370_10004102 3300006353 Bacteria 7017
29 Ga0075370_10019963 3300006353 Bacteria 3654
30 Ga0075370_10468367 3300006353 Bacteria 759
31 Ga0105243_10917953 3300009148 Bacteria 872
32 Ga0105237_10000175 3300009545 Bacteria 90284
33 Ga0105249_10050196 3300009553 Bacteria 3804
34 Ga0105249_12710476 3300009553 Bacteria 568
35 Ga0105239_10005120 3300010375 Bacteria 15474
36 Ga0163163_10851684 3300014325 Bacteria 975
37 Ga0163161_10220931 3300017792 Bacteria 1467
38 Ga0213876_10017758 3300021384 Bacteria 3754
39 Ga0209025_1107468 3300025294 Bacteria 866
40 Ga0209051_1119775 3300025303 Bacteria 670
41 Ga0207671_10027157 3300025914 Bacteria 4281
42 Ga0207664_11015435 3300025929 Bacteria 743
43 Ga0207712_10039029 3300025961 Bacteria 3251
44 Ga0207668_11422468 3300025972 Bacteria 625
45 Ga0207678_10196054 3300026067 Bacteria 1726
46 Ga0207675_100284187 3300026118 Bacteria 1608
47 Ga0268265_10192354 3300028380 Bacteria 1763
48 Ga0268264_10155221 3300028381 Bacteria 2056
49 Ga0307413_10241622 3300031824 Bacteria 1334
50 Ga0307406_10029369 3300031901 Bacteria 3330
51 Ga0307407_10067364 3300031903 Bacteria 2116
52 Ga0307409_100516658 3300031995 Bacteria 1166
53 Ga0436365_0960069 3300039437 Bacteria 12819
54 Ga0439461_0059119 3300041410 Bacteria 867
55 Ga0439466_0044524 3300041411 Bacteria 1470
56 Ga0439465_0005528 3300041413 Bacteria 4028
57 Ga0439465_0015238 3300041413 Bacteria 2398
58 Ga0439465_0053668 3300041413 Bacteria 1324
59 Ga0451789_0144968 3300041443 Bacteria 1014
60 Ga0451853_1066334 3300041512 Bacteria 577
61 Ga0439431_0017087 3300041997 Bacteria 1703
62 Ga0439434_0040946 3300042435 Bacteria 1423
63 Ga0439434_0151194 3300042435 Bacteria 769
64 Ga0466969_0317780 3300044656 Bacteria 705
65 Ga0466972_0018392 3300044658 Bacteria 3493
66 Ga0466965_0041570 3300044683 Bacteria 2265
67 Ga0466966_0018957 3300044684 Bacteria 4534
68 Ga0466966_0142563 3300044684 Bacteria 1464
69 Ga0466963_0066695 3300044694 Bacteria 2415
70 Ga0466963_0154831 3300044694 Bacteria 1593
71 Ga0466963_0366914 3300044694 Bacteria 1014
72 Ga0466968_0100553 3300044735 Bacteria 1290
73 Ga0466970_0013301 3300044765 Bacteria 4219
74 Ga0466957_0060158 3300044842 Bacteria 2329
75 Ga0466960_0000190 3300044901 Bacteria 21147
76 Ga0466959_0063174 3300045049 Bacteria 2689
77 Ga0466967_0527628 3300045976 Bacteria 1161
78 Ga0466967_1015560 3300045976 Bacteria 826
79 Ga0466967_1405879 3300045976 Bacteria 695
80 Ga0466967_1453651 3300045976 Bacteria 683
81 Ga0495638_0010617 3300046460 Bacteria 6378
82 Ga0495649_0103656 3300046694 Bacteria 1511
83 Ga0495649_0361812 3300046694 Unclassified 732
84 Ga0495672_0059600 3300047320 Bacteria 2208
85 Ga0495672_0154183 3300047320 Bacteria 1188
86 Ga0495672_0347343 3300047320 Bacteria 690
87 Ga0496100_0320042 3300048903 Unclassified 1165
88 Ga0496102_0033667 3300048905 Bacteria 4606
89 Ga0496113_0454544 3300048916 Bacteria 1029
90 Ga0496113_0524347 3300048916 Bacteria 951
91 Ga0496114_0090247 3300048917 Bacteria 2601
92 Ga0496125_0283092 3300048928 Bacteria 1026
93 Ga0496126_0011612 3300048929 Bacteria 9091
94 Ga0496126_0070555 3300048929 Bacteria 3112
95 Ga0501032_0503368 3300049569 Bacteria 774
96 Ga0501047_0234170 3300049581 Bacteria 1688
97 nmdc:mga03683_463717_c1 3300050489 Bacteria 610
98 nmdc:mga03n38_111759_c1 3300050490 Bacteria 1331
99 nmdc:mga03n38_426384_c1 3300050490 Bacteria 734
100 nmdc:mga03n38_614613_c1 3300050490 Bacteria 620
101 nmdc:mga00v17_14078_c1 3300050491 Bacteria 4458
102 nmdc:mga0yw44_773_c1 3300050492 Bacteria 11435
103 nmdc:mga06z11_102922_c1 3300050494 Bacteria 1155
104 nmdc:mga06z11_828531_c1 3300050494 Bacteria 564
105 nmdc:mga07m45_23926_c1 3300050496 Bacteria 3341
106 nmdc:mga07m45_252526_c1 3300050496 Bacteria 1026
107 nmdc:mga0qj67_232412_c1 3300050509 Bacteria 1496
108 nmdc:mga0sz30_106274_c1 3300050516 Bacteria 1228
109 nmdc:mga0sz30_139528_c1 3300050516 Bacteria 1070
110 nmdc:mga0sz30_64134_c1 3300050516 Bacteria 1573
111 nmdc:mga0sz30_9048_c1 3300050516 Bacteria 3777
112 Ga0500635_0020022 3300053080 Bacteria 2043
113 Ga0500652_000287 3300053131 Bacteria 18511
114 Ga0500559_0075901 3300053136 Bacteria 1521
115 Ga0500559_0224526 3300053136 Bacteria 885
116 Ga0500588_0095354 3300053146 Bacteria 1018
117 Ga0500588_0223195 3300053146 Bacteria 703
118 Ga0500616_0007671 3300053153 Bacteria 6816
119 Ga0500627_0077781 3300053158 Bacteria 1476
120 Ga0500645_000263 3300053730 Bacteria 37917
121 Ga0500645_026181 3300053730 Bacteria 1775
122 2644485968 2643221687 Bacteria 6500351
123 2644633747 2643221715 Bacteria 6671032
124 2738707644 2738541274 Bacteria 6909446
125 2739332656 2738543028 Bacteria 6917070
126 2902801057 2902799365 Bacteria 5419524
127 2902814957 2902810491 Bacteria 6794147
128 2939585812 2939582691 Bacteria 7088898
129 Ga0466970_0016411
130 LJNas_1024360
131 JGI24034J26672_10016201
132 Ga0070670_100123723
133 Ga0070666_10863200
134 Ga0070682_100065035
135 Ga0070668_101577481
136 Ga0070709_10467991
137 Ga0070714_100254242
138 Ga0070711_100844928
139 Ga0070698_101509362
140 Ga0068860_100051677
141 Ga0068862_100280799
142 Ga0081455_10018036
143 Ga0081455_10053111
144 Ga0081538_10173750
145 Ga0081540_1211370
146 Ga0075365_10007534
147 Ga0075363_100058461
148 Ga0075363_100081637
149 Ga0075364_10034640
150 Ga0075364_10161999
151 Ga0075364_10959653
152 Ga0075367_10349898
153 Ga0075367_10599108
154 Ga0075369_10048379
155 Ga0075369_10132878
156 Ga0075370_10004102
157 Ga0075370_10019963
158 Ga0075370_10468367
159 Ga0105243_10917953
160 Ga0105237_10000175
161 Ga0105249_10050196
162 Ga0105249_12710476
163 Ga0105239_10005120
164 Ga0163163_10851684
165 Ga0163161_10220931
166 Ga0213876_10017758
167 Ga0209025_1107468
168 Ga0209051_1119775
169 Ga0207671_10027157
170 Ga0207664_11015435
171 Ga0207712_10039029
172 Ga0207668_11422468
173 Ga0207678_10196054
174 Ga0207675_100284187
175 Ga0268265_10192354
176 Ga0268264_10155221
177 Ga0307413_10241622
178 Ga0307406_10029369
179 Ga0307407_10067364
180 Ga0307409_100516658
181 Ga0436365_0960069
182 Ga0439461_0059119
183 Ga0439466_0044524
184 Ga0439465_0005528
185 Ga0439465_0015238
186 Ga0439465_0053668
187 Ga0451789_0144968
188 Ga0451853_1066334
189 Ga0439431_0017087
190 Ga0439434_0040946
191 Ga0439434_0151194
192 Ga0466969_0317780
193 Ga0466972_0018392
194 Ga0466965_0041570
195 Ga0466966_0018957
196 Ga0466966_0142563
197 Ga0466963_0066695
198 Ga0466963_0154831
199 Ga0466963_0366914
200 Ga0466968_0100553
201 Ga0466970_0013301
202 Ga0466957_0060158
203 Ga0466960_0000190
204 Ga0466959_0063174
205 Ga0466967_0527628
206 Ga0466967_1015560
207 Ga0466967_1405879
208 Ga0466967_1453651
209 Ga0495638_0010617
210 Ga0495649_0103656
211 Ga0495649_0361812
212 Ga0495672_0059600
213 Ga0495672_0154183
214 Ga0495672_0347343
215 Ga0496100_0320042
216 Ga0496102_0033667
217 Ga0496113_0454544
218 Ga0496113_0524347
219 Ga0496114_0090247
220 Ga0496125_0283092
221 Ga0496126_0011612
222 Ga0496126_0070555
223 Ga0501032_0503368
224 Ga0501047_0234170
225 nmdc:mga03683_463717_c1
226 nmdc:mga03n38_111759_c1
227 nmdc:mga03n38_426384_c1
228 nmdc:mga03n38_614613_c1
229 nmdc:mga00v17_14078_c1
230 nmdc:mga0yw44_773_c1
231 nmdc:mga06z11_102922_c1
232 nmdc:mga06z11_828531_c1
233 nmdc:mga07m45_23926_c1
234 nmdc:mga07m45_252526_c1
235 nmdc:mga0qj67_232412_c1
236 nmdc:mga0sz30_106274_c1
237 nmdc:mga0sz30_139528_c1
238 nmdc:mga0sz30_64134_c1
239 nmdc:mga0sz30_9048_c1
240 Ga0500635_0020022
241 Ga0500652_000287
242 Ga0500559_0075901
243 Ga0500559_0224526
244 Ga0500588_0095354
245 Ga0500588_0223195
246 Ga0500616_0007671
247 Ga0500627_0077781
248 Ga0500645_000263
249 Ga0500645_026181
250 2644485968
251 2644633747
252 2738707644
253 2739332656
254 2902801057
255 2902814957
256 2939585812

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01243

Putative_PNPOx

Pyridoxamine 5'-phosphate oxidase

4

89

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
1wv4-assembly1.cif.gz_A x-ray structure of escherichia coli pyridoxine 5'-phosphate oxidase in tetragonal crystal form 0.8093 14 86
5jab-assembly1.cif.gz_B structure of the biliverdin reductase rv2074 from mycobacterium tuberculosis in complex with f420 0.7684 1 150
3db0-assembly1.cif.gz_B crystal structure of putative pyridoxamine 5'-phosphate oxidase (np_472219.1) from listeria innocua at 2.00 a resolution 0.763 4 150
2arz-assembly1.cif.gz_A crystal structure of protein of unknown function from pseudomonas aeruginosa 0.7441 5 149
2arz-assembly1.cif.gz_B crystal structure of protein of unknown function from pseudomonas aeruginosa 0.7437 5 146
ID Description Score Start End Superfamily
af_O86340_6_112_2.30.110.10 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.8776 9 108 2.30.110.10
af_O86340_6_112_2.30.110.10 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.8173 9 108 2.30.110.10
2imlD01 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.769 14 83 2.30.110.10
2arzB01 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.7437 5 146 2.30.110.10
3r5pA00 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.7349 13 147 2.30.110.10
ID Description Score Start End GO Terms
AF-A0A101BFU0-F1-model_v4 Pyridoxamine 5-phosphate oxidase 0.9844 6 147 GO:0005829
GO:0016627
GO:0070967
AF-A0A449GES3-F1-model_v4 PPOX class probable F420-dependent enzyme, Rv2061 family 0.9827 14 149 GO:0005829
GO:0016627
GO:0070967
AF-A0A6N4VUZ2-F1-model_v4 deleted 0.9716 11 149
AF-A0A2V0MY13-F1-model_v4 PPOX class F420-dependent oxidoreductase 0.9711 8 149 GO:0005829
GO:0016627
GO:0070967
AF-A0A810KA84-F1-model_v4 deleted 0.9687 18 149

Map