F136259
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 127 | 112 | 254 | 480 |
Family's Representative Sequence
| Representative Sequence | iso_pu_bacteria|2977254563|2977256977 |
| Length | 501 |
| Sequence | VVKALEEKNNDQEKIEGEKVEQDLLSENKSGYIRLKKFQFIMLLFLLVFLSAGITTIAFAFGKEKVVTVGADRPEFNKLYEAFDTLKNGYYKDVDQKKLINGAINGMVESLDDPYSDYMSNEEAKSFHSSISSSFEGIGAEIQEKDGHIVIVSPIKGSPAEKAGLKPNDMIISVDGKSLQGMNSTQAVTLIRGKKGTKVELTIQRPGTEAPMTVPIIRDTIPIETVYGEMVDDTIAKVQITSFSSNTSKELVTTLNDLQKKGMKGLVLDLRQNPGGLLDQAVSITSMFVPKGKIIVKEEDRNGKIKEIASQNQGNPDLPLVVLIDKGSASASEIFAAAVKESAGIPLVGEKSFGKGTVQTAEDFKDGSNLKYTIAKWLTPNGNWIHKKGIEPDVAVALPDYATLPIIDPEKELSISNSSTEIQTAQKMLKAIGYDPGREDGFFDEKTKQAVIAFQKAQKLSADGVLKGDSTLKLMELLRDKIKTSDTQLQKAIEVLKGRMK |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300003578 | Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) | Metatranscriptome | Unclassified |
| 2 | 3300009036 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG | Metagenome | Rhizosphere |
| 3 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 4 | 3300025225 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 5 | 3300025233 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) | Metagenome | Endosphere |
| 6 | 3300025294 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 7 | 3300027312 | Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 8 | 3300030500 | Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) | Metagenome | Rhizosphere |
| 9 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 10 | 3300041404 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 | Metagenome | Rhizosphere |
| 11 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 12 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 13 | 3300044735 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R | Metagenome | Rhizosphere |
| 14 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 15 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 16 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 17 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 18 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 19 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 20 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 21 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 22 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 23 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 24 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 25 | 2977254563 | Bacillus sp. SORGH_AS 510 | Isolate | Unclassified |
| 26 | 2512564039 | Paenibacillus mucilaginosus 3016 | Isolate | Rhizosphere |
| 27 | 2548877040 | Paenibacillus sonchi X19-5 | Isolate | Rhizosphere |
| 28 | 2571042143 | Paenibacillus graminis RSA19 | Isolate | Unclassified |
| 29 | 2571042588 | Paenibacillus zanthoxyli JH29 | Isolate | Unclassified |
| 30 | 2576861424 | Paenibacillus sabinae T27 | Isolate | Rhizosphere |
| 31 | 2579778775 | Paenibacillus durus P3L-5 | Isolate | Unclassified |
| 32 | 2585428059 | Paenibacillus chondroitinus OK414 | Isolate | Rhizosphere |
| 33 | 2593339198 | Paenibacillus sp. UNCCL117 | Isolate | Unclassified |
| 34 | 2600255286 | Paenibacillus sp. NFR01 | Isolate | Rhizoplane |
| 35 | 2619619294 | Paenibacillus durus ATCC 35681 | Isolate | Unclassified |
| 36 | 2643221543 | Paenibacillus sp. Root52 | Isolate | Unclassified |
| 37 | 2643221676 | Paenibacillus sp. Root444D2 | Isolate | Unclassified |
| 38 | 2643221735 | Bacillus sp. Root920 | Isolate | Unclassified |
| 39 | 2671180330 | Peribacillus simplex SH-B26 | Isolate | Unclassified |
| 40 | 2671180694 | Paenibacillus sp. A3 | Isolate | Unclassified |
| 41 | 2684623153 | Bacillus pumilus SH-B9 | Isolate | Unclassified |
| 42 | 2687453109 | Bacillus pumilus SH-B11 | Isolate | Unclassified |
| 43 | 2728368933 | Paenibacillus jilunlii DSM 23019 | Isolate | Rhizosphere |
| 44 | 2738541295 | Bacillus sp. OK085 | Isolate | Unclassified |
| 45 | 2791355222 | Paenibacillus oryzae 1DrF-4 | Isolate | Unclassified |
| 46 | 2811994870 | Bacillus sp. JB4 | Isolate | Unclassified |
| 47 | 2816332186 | Peribacillus frigoritolerans 3612 | Isolate | Unclassified |
| 48 | 2816332295 | Bacillus paralicheniformis MDJK30 | Isolate | Rhizosphere |
| 49 | 2818991441 | Niallia circulans 3243 | Isolate | Rhizosphere |
| 50 | 2818991459 | Paenibacillus sp. 597 | Isolate | Unclassified |
| 51 | 2818991468 | Bacillus safensis 3300 | Isolate | Rhizosphere |
| 52 | 2823526263 | Bacillus altitudinis P-10 | Isolate | Unclassified |
| 53 | 2842682962 | Bacillus sp. R-72492 | Isolate | Unclassified |
| 54 | 2849139964 | Bacillus sp. R-71875 | Isolate | Unclassified |
| 55 | 2852673933 | Sporosarcina sp. JAI121 | Isolate | Rhizosphere |
| 56 | 2857453340 | Paenibacillus sp. R-74130 | Isolate | Unclassified |
| 57 | 2857581216 | Bacillus sp. R-71922 | Isolate | Unclassified |
| 58 | 2857604169 | Domibacillus sp. R-71921 | Isolate | Unclassified |
| 59 | 2857609550 | Domibacillus sp. R-71929 | Isolate | Unclassified |
| 60 | 2864733723 | Paenibacillus sp. JGP012 | Isolate | Rhizosphere |
| 61 | 2864997549 | Paenibacillus sp. R-72005 | Isolate | Unclassified |
| 62 | 2881636855 | Paenibacillus sp. 7197 | Isolate | Rhizosphere |
| 63 | 2881644220 | Siminovitchia terrae LMG 29736 | Isolate | Rhizosphere |
| 64 | 2885526491 | Paenibacillus sp. LK1 | Isolate | Rhizosphere |
| 65 | 2889042446 | Paenibacillus sp. 37 | Isolate | Rhizosphere |
| 66 | 2889295896 | Paenibacillus sp. PvR098 | Isolate | Rhizosphere |
| 67 | 2904113452 | Paenibacillus paridis py1325 | Isolate | Unclassified |
| 68 | 2904162308 | Paenibacillus sp. AD87 | Isolate | Unclassified |
| 69 | 2904490793 | Paenibacillus sp. 1295 | Isolate | Rhizosphere |
| 70 | 2904755435 | Paenibacillus aceris KACC 19194 | Isolate | Rhizosphere |
| 71 | 2908665501 | Bacillus pumilus 1391 | Isolate | Rhizosphere |
| 72 | 2919093281 | Bacillus safensis 1383 | Isolate | Rhizosphere |
| 73 | 2919160200 | Paenibacillus sp. 2003 | Isolate | Unclassified |
| 74 | 2919414237 | Neobacillus niacini 3240 | Isolate | Rhizosphere |
| 75 | 2919425241 | Bacillus sp. 3255 | Isolate | Rhizosphere |
| 76 | 2919726948 | Bacillus pumilus 4489 | Isolate | Unclassified |
| 77 | 2928510474 | Sporosarcina psychrophila 1288 | Isolate | Rhizosphere |
| 78 | 2929206907 | Paenibacillus sp. R-74146 Hybrid assembly | Isolate | Unclassified |
| 79 | 2931384279 | Paenibacillus sp. DR312 | Isolate | Rhizosphere |
| 80 | 2936361878 | Neobacillus endophyticus BRMEA1 | Isolate | Unclassified |
| 81 | 2938649242 | Paenibacillus helianthi P26E | Isolate | Rhizosphere |
| 82 | 2939679117 | Paenibacillus sp. 4624 | Isolate | Rhizosphere |
| 83 | 2945991243 | Paenibacillus sp. B21a W2I17 | Isolate | Rhizosphere |
| 84 | 2946053406 | Paenibacillus sp. W4I10 | Isolate | Rhizosphere |
| 85 | 2954773129 | Bacillus sp. TBS-096 | Isolate | Rhizosphere |
| 86 | 2968558590 | Paenibacillus sp. P3E | Isolate | Rhizosphere |
| 87 | 2971403814 | Paenibacillus tritici LMG 29502 | Isolate | Unclassified |
| 88 | 2971410472 | Paenibacillus oryzisoli 1ZS3-15 | Isolate | Unclassified |
| 89 | 2971511577 | Paenibacillus apii 7124 | Isolate | Rhizosphere |
| 90 | 2980125574 | Paenibacillus sp. tmac-D7 | Isolate | Unclassified |
| 91 | 2980176882 | Paenibacillus apii 7028 | Isolate | Rhizosphere |
| 92 | 2981284811 | Paenibacillus sp. PvR052 | Isolate | Rhizosphere |
| 93 | 2981289755 | Paenibacillus sp. PvR148 | Isolate | Rhizosphere |
| 94 | 2981980479 | Paenibacillus sp. PvR018 | Isolate | Rhizosphere |
| 95 | 2981985349 | Paenibacillus sp. PvR053 | Isolate | Rhizosphere |
| 96 | 2984532647 | Paenibacillus sp. SORGH_AS338 | Isolate | Aerial Root |
| 97 | 2988225383 | Paenibacillus sp. P46E | Isolate | Rhizosphere |
| 98 | 2990275345 | Bacillus sp. SLBN-46 | Isolate | Unclassified |
| 99 | 2996632988 | Paenibacillus sp. P32E | Isolate | Rhizosphere |
| 100 | 3001267043 | Bacillus sp. FJAT-49870 | Isolate | Rhizosphere |
| 101 | 3001272096 | Lederbergia citrisecunda FJAT-49732 | Isolate | Rhizosphere |
| 102 | 3001892409 | Neobacillus rhizophilus FJAT-49825 | Isolate | Rhizosphere |
| 103 | 3006858327 | Bacillus paralicheniformis SUBG0010 | Isolate | Unclassified |
| 104 | 3006969106 | Bacillus sp. FJAT-50079 | Isolate | Rhizosphere |
| 105 | 3006978542 | Bacillus sp. FJAT-49705 | Isolate | Rhizosphere |
| 106 | 8054280661 | Metabacillus kandeliae GX 13764 | Isolate | Rhizosphere |
| 107 | 8054465665 | Paenibacillus sonchi IIRRBNF1 | Isolate | Rhizosphere |
| 108 | 8054795415 | Paenibacillus periandrae PM10 | Isolate | Nodule |
| 109 | 8055632911 | Paenibacillus radicibacter N1-5-1-14 | Isolate | Unclassified |
| 110 | 8056533031 | Paenibacillus qinlingensis TEGT-2 | Isolate | Unclassified |
| 111 | 8057733483 | Paenibacillus apiarius MW-14 | Isolate | Rhizosphere |
| 112 | 8057977335 | Paenibacillus oenotherae DT7-4 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 29.13 |
| Metatranscriptomes | 1.57 |
| Isolates | 69.29 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0.79 |
| Bulb | 0 |
| Endosphere | 5.51 |
| Nodule | 0.79 |
| Rhizoplane | 2.36 |
| Rhizosphere | 43.31 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0.79 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0006562J51391_1003886 | 3300003578 | Bacteria | 5108 |
| 2 | Ga0006562J51391_1012722 | 3300003578 | Bacteria | 2913 |
| 3 | Ga0105244_10076508 | 3300009036 | Bacteria | 1662 |
| 4 | Ga0105246_10000198 | 3300011119 | Bacteria | 30210 |
| 5 | Ga0209566_100163 | 3300025225 | Bacteria | 74229 |
| 6 | Ga0209566_100228 | 3300025225 | Bacteria | 54872 |
| 7 | Ga0209437_100568 | 3300025233 | Bacteria | 24103 |
| 8 | Ga0209025_1000001 | 3300025294 | Bacteria | 1888151 |
| 9 | Ga0209025_1001872 | 3300025294 | Bacteria | 24656 |
| 10 | Ga0209025_1019069 | 3300025294 | Bacteria | 3837 |
| 11 | Ga0209025_1036933 | 3300025294 | Bacteria | 2177 |
| 12 | Ga0209371_1014869 | 3300027312 | Bacteria | 2115 |
| 13 | Ga0268256_1016492 | 3300030500 | Bacteria | 2115 |
| 14 | Ga0395899_0056264 | 3300037312 | Bacteria | 2907 |
| 15 | Ga0439436_0000988 | 3300041404 | Bacteria | 7899 |
| 16 | Ga0466969_0003607 | 3300044656 | Bacteria | 8236 |
| 17 | Ga0466961_0019223 | 3300044693 | Bacteria | 4397 |
| 18 | Ga0466968_0013705 | 3300044735 | Bacteria | 3191 |
| 19 | Ga0466959_0030627 | 3300045049 | Bacteria | 3984 |
| 20 | Ga0496110_0005165 | 3300048913 | Bacteria | 10206 |
| 21 | Ga0496111_0004279 | 3300048914 | Bacteria | 8995 |
| 22 | Ga0496116_0005323 | 3300048919 | Bacteria | 11988 |
| 23 | Ga0496116_0025998 | 3300048919 | Unclassified | 4290 |
| 24 | Ga0496116_0073362 | 3300048919 | Bacteria | 2158 |
| 25 | Ga0496117_0003451 | 3300048920 | Bacteria | 18384 |
| 26 | Ga0496119_0000316 | 3300048922 | Bacteria | 67705 |
| 27 | Ga0496120_0001011 | 3300048923 | Bacteria | 37738 |
| 28 | Ga0496122_0014113 | 3300048925 | Bacteria | 7749 |
| 29 | Ga0496122_0020884 | 3300048925 | Bacteria | 5888 |
| 30 | Ga0496122_0029564 | 3300048925 | Bacteria | 4619 |
| 31 | Ga0496122_0030642 | 3300048925 | Bacteria | 4501 |
| 32 | Ga0496122_0081147 | 3300048925 | Bacteria | 2259 |
| 33 | Ga0496124_0000976 | 3300048927 | Bacteria | 45516 |
| 34 | Ga0496124_0001671 | 3300048927 | Bacteria | 31548 |
| 35 | Ga0496124_0185642 | 3300048927 | Bacteria | 1596 |
| 36 | Ga0496125_0001061 | 3300048928 | Bacteria | 42479 |
| 37 | Ga0496125_0014292 | 3300048928 | Bacteria | 7737 |
| 38 | Ga0496126_0002425 | 3300048929 | Bacteria | 25239 |
| 39 | Ga0496126_0008999 | 3300048929 | Bacteria | 10683 |
| 40 | 2977256977 | 2977254563 | Bacteria | 4828420 |
| 41 | 2512729551 | 2512564039 | Bacteria | 8739048 |
| 42 | 2550900659 | 2548877040 | Bacteria | 7507281 |
| 43 | 2571532614 | 2571042143 | Bacteria | 6986194 |
| 44 | 2573040033 | 2571042588 | Bacteria | 5045676 |
| 45 | 2578338986 | 2576861424 | Bacteria | 5270569 |
| 46 | 2580934824 | 2579778775 | Bacteria | 5360914 |
| 47 | 2587743508 | 2585428059 | Bacteria | 8696589 |
| 48 | 2595320694 | 2593339198 | Bacteria | 7267884 |
| 49 | 2601640474 | 2600255286 | Bacteria | 5390125 |
| 50 | 2621277446 | 2619619294 | Bacteria | 5575484 |
| 51 | 2643736892 | 2643221543 | Bacteria | 6628015 |
| 52 | 2644423336 | 2643221676 | Bacteria | 8119172 |
| 53 | 2644740494 | 2643221735 | Bacteria | 3676263 |
| 54 | 2672336490 | 2671180330 | Bacteria | 5521719 |
| 55 | 2673818650 | 2671180694 | Bacteria | 7506943 |
| 56 | 2686997146 | 2684623153 | Bacteria | 3878815 |
| 57 | 2687498452 | 2687453109 | Bacteria | 3860091 |
| 58 | 2728531424 | 2728368933 | Bacteria | 7044283 |
| 59 | 2738816048 | 2738541295 | Bacteria | 5730091 |
| 60 | 2793185553 | 2791355222 | Bacteria | 5898266 |
| 61 | 2812316335 | 2811994870 | Bacteria | 3776934 |
| 62 | 2816863045 | 2816332186 | Bacteria | 5331395 |
| 63 | 2817480372 | 2816332295 | Bacteria | 4352468 |
| 64 | 2819569467 | 2818991441 | Bacteria | 5062707 |
| 65 | 2819675516 | 2818991459 | Bacteria | 8736032 |
| 66 | 2819723407 | 2818991468 | Bacteria | 3723169 |
| 67 | 2823528313 | 2823526263 | Bacteria | 3765752 |
| 68 | 2842683093 | 2842682962 | Bacteria | 5589973 |
| 69 | 2849143922 | 2849139964 | Bacteria | 5613304 |
| 70 | 2852674727 | 2852673933 | Bacteria | 3347676 |
| 71 | 2857459154 | 2857453340 | Bacteria | 8090534 |
| 72 | 2857582788 | 2857581216 | Bacteria | 5522813 |
| 73 | 2857604379 | 2857604169 | Bacteria | 5111450 |
| 74 | 2857611024 | 2857609550 | Bacteria | 3753890 |
| 75 | 2864736443 | 2864733723 | Bacteria | 6770668 |
| 76 | 2865000966 | 2864997549 | Bacteria | 5139696 |
| 77 | 2881638069 | 2881636855 | Bacteria | 5205297 |
| 78 | 2881649516 | 2881644220 | Bacteria | 5302661 |
| 79 | 2885529852 | 2885526491 | Bacteria | 7164189 |
| 80 | 2889048080 | 2889042446 | Bacteria | 7618936 |
| 81 | 2889299409 | 2889295896 | Bacteria | 4704906 |
| 82 | 2904117904 | 2904113452 | Bacteria | 7796941 |
| 83 | 2904168080 | 2904162308 | Bacteria | 7086713 |
| 84 | 2904494348 | 2904490793 | Bacteria | 7046938 |
| 85 | 2904762752 | 2904755435 | Bacteria | 7986759 |
| 86 | 2908668479 | 2908665501 | Bacteria | 3678115 |
| 87 | 2919096248 | 2919093281 | Bacteria | 3660974 |
| 88 | 2919165135 | 2919160200 | Bacteria | 6929020 |
| 89 | 2919414889 | 2919414237 | Bacteria | 5429133 |
| 90 | 2919430533 | 2919425241 | Bacteria | 8055701 |
| 91 | 2919728025 | 2919726948 | Bacteria | 3696050 |
| 92 | 2928511418 | 2928510474 | Bacteria | 4815308 |
| 93 | 2929207049 | 2929206907 | Bacteria | 5918291 |
| 94 | 2931385186 | 2931384279 | Bacteria | 7299545 |
| 95 | 2936367045 | 2936361878 | Bacteria | 5632809 |
| 96 | 2938652517 | 2938649242 | Bacteria | 7118381 |
| 97 | 2939680647 | 2939679117 | Bacteria | 6921672 |
| 98 | 2945996172 | 2945991243 | Bacteria | 7008369 |
| 99 | 2946058862 | 2946053406 | Bacteria | 6978655 |
| 100 | 2954774170 | 2954773129 | Bacteria | 3741715 |
| 101 | 2968559319 | 2968558590 | Bacteria | 6956864 |
| 102 | 2971410398 | 2971403814 | Bacteria | 7370929 |
| 103 | 2971416550 | 2971410472 | Bacteria | 8311090 |
| 104 | 2971514421 | 2971511577 | Bacteria | 5404012 |
| 105 | 2980128724 | 2980125574 | Bacteria | 5567337 |
| 106 | 2980180634 | 2980176882 | Bacteria | 5397533 |
| 107 | 2981288820 | 2981284811 | Bacteria | 4641497 |
| 108 | 2981293727 | 2981289755 | Bacteria | 4641509 |
| 109 | 2981984428 | 2981980479 | Bacteria | 4641628 |
| 110 | 2981989444 | 2981985349 | Bacteria | 4641497 |
| 111 | 2984537358 | 2984532647 | Bacteria | 5288506 |
| 112 | 2988227409 | 2988225383 | Bacteria | 7221625 |
| 113 | 2990277850 | 2990275345 | Bacteria | 4887158 |
| 114 | 2996637750 | 2996632988 | Bacteria | 6921523 |
| 115 | 3001268094 | 3001267043 | Bacteria | 4823521 |
| 116 | 3001273595 | 3001272096 | Bacteria | 4729684 |
| 117 | 3001898153 | 3001892409 | Bacteria | 6328293 |
| 118 | 3006860717 | 3006858327 | Bacteria | 4317835 |
| 119 | 3006973045 | 3006969106 | Bacteria | 4739423 |
| 120 | 3006981391 | 3006978542 | Bacteria | 5328100 |
| 121 | 8054281619 | 8054280661 | Bacteria | 4232245 |
| 122 | 8054471416 | 8054465665 | Bacteria | 7323556 |
| 123 | 8054799118 | 8054795415 | Bacteria | 9785225 |
| 124 | 8055633179 | 8055632911 | Bacteria | 5283357 |
| 125 | 8056536092 | 8056533031 | Bacteria | 8964429 |
| 126 | 8057735243 | 8057733483 | Bacteria | 6578323 |
| 127 | 8057981382 | 8057977335 | Bacteria | 5694872 |
| 128 | Ga0006562J51391_1003886 | |||
| 129 | Ga0006562J51391_1012722 | |||
| 130 | Ga0105244_10076508 | |||
| 131 | Ga0105246_10000198 | |||
| 132 | Ga0209566_100163 | |||
| 133 | Ga0209566_100228 | |||
| 134 | Ga0209437_100568 | |||
| 135 | Ga0209025_1000001 | |||
| 136 | Ga0209025_1001872 | |||
| 137 | Ga0209025_1019069 | |||
| 138 | Ga0209025_1036933 | |||
| 139 | Ga0209371_1014869 | |||
| 140 | Ga0268256_1016492 | |||
| 141 | Ga0395899_0056264 | |||
| 142 | Ga0439436_0000988 | |||
| 143 | Ga0466969_0003607 | |||
| 144 | Ga0466961_0019223 | |||
| 145 | Ga0466968_0013705 | |||
| 146 | Ga0466959_0030627 | |||
| 147 | Ga0496110_0005165 | |||
| 148 | Ga0496111_0004279 | |||
| 149 | Ga0496116_0005323 | |||
| 150 | Ga0496116_0025998 | |||
| 151 | Ga0496116_0073362 | |||
| 152 | Ga0496117_0003451 | |||
| 153 | Ga0496119_0000316 | |||
| 154 | Ga0496120_0001011 | |||
| 155 | Ga0496122_0014113 | |||
| 156 | Ga0496122_0020884 | |||
| 157 | Ga0496122_0029564 | |||
| 158 | Ga0496122_0030642 | |||
| 159 | Ga0496122_0081147 | |||
| 160 | Ga0496124_0000976 | |||
| 161 | Ga0496124_0001671 | |||
| 162 | Ga0496124_0185642 | |||
| 163 | Ga0496125_0001061 | |||
| 164 | Ga0496125_0014292 | |||
| 165 | Ga0496126_0002425 | |||
| 166 | Ga0496126_0008999 | |||
| 167 | 2977256977 | |||
| 168 | 2512729551 | |||
| 169 | 2550900659 | |||
| 170 | 2571532614 | |||
| 171 | 2573040033 | |||
| 172 | 2578338986 | |||
| 173 | 2580934824 | |||
| 174 | 2587743508 | |||
| 175 | 2595320694 | |||
| 176 | 2601640474 | |||
| 177 | 2621277446 | |||
| 178 | 2643736892 | |||
| 179 | 2644423336 | |||
| 180 | 2644740494 | |||
| 181 | 2672336490 | |||
| 182 | 2673818650 | |||
| 183 | 2686997146 | |||
| 184 | 2687498452 | |||
| 185 | 2728531424 | |||
| 186 | 2738816048 | |||
| 187 | 2793185553 | |||
| 188 | 2812316335 | |||
| 189 | 2816863045 | |||
| 190 | 2817480372 | |||
| 191 | 2819569467 | |||
| 192 | 2819675516 | |||
| 193 | 2819723407 | |||
| 194 | 2823528313 | |||
| 195 | 2842683093 | |||
| 196 | 2849143922 | |||
| 197 | 2852674727 | |||
| 198 | 2857459154 | |||
| 199 | 2857582788 | |||
| 200 | 2857604379 | |||
| 201 | 2857611024 | |||
| 202 | 2864736443 | |||
| 203 | 2865000966 | |||
| 204 | 2881638069 | |||
| 205 | 2881649516 | |||
| 206 | 2885529852 | |||
| 207 | 2889048080 | |||
| 208 | 2889299409 | |||
| 209 | 2904117904 | |||
| 210 | 2904168080 | |||
| 211 | 2904494348 | |||
| 212 | 2904762752 | |||
| 213 | 2908668479 | |||
| 214 | 2919096248 | |||
| 215 | 2919165135 | |||
| 216 | 2919414889 | |||
| 217 | 2919430533 | |||
| 218 | 2919728025 | |||
| 219 | 2928511418 | |||
| 220 | 2929207049 | |||
| 221 | 2931385186 | |||
| 222 | 2936367045 | |||
| 223 | 2938652517 | |||
| 224 | 2939680647 | |||
| 225 | 2945996172 | |||
| 226 | 2946058862 | |||
| 227 | 2954774170 | |||
| 228 | 2968559319 | |||
| 229 | 2971410398 | |||
| 230 | 2971416550 | |||
| 231 | 2971514421 | |||
| 232 | 2980128724 | |||
| 233 | 2980180634 | |||
| 234 | 2981288820 | |||
| 235 | 2981293727 | |||
| 236 | 2981984428 | |||
| 237 | 2981989444 | |||
| 238 | 2984537358 | |||
| 239 | 2988227409 | |||
| 240 | 2990277850 | |||
| 241 | 2996637750 | |||
| 242 | 3001268094 | |||
| 243 | 3001273595 | |||
| 244 | 3001898153 | |||
| 245 | 3006860717 | |||
| 246 | 3006973045 | |||
| 247 | 3006981391 | |||
| 248 | 8054281619 | |||
| 249 | 8054471416 | |||
| 250 | 8054799118 | |||
| 251 | 8055633179 | |||
| 252 | 8056536092 | |||
| 253 | 8057735243 | |||
| 254 | 8057981382 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 5nm7-assembly2.cif.gz_A | crystal structure of burkholderia ap3 phage endolysin | 0.9722 | 381 | 443 |
| 5nm7-assembly1.cif.gz_G | crystal structure of burkholderia ap3 phage endolysin | 0.966 | 381 | 446 |
| 5tv7-assembly2.cif.gz_B | 2.05 angstrom resolution crystal structure of peptidoglycan-binding protein from clostridioides difficile in complex with glutamine hydroxamate. | 0.9567 | 377 | 443 |
| 4xxt-assembly1.cif.gz_A | crystal structure of fused zn-dependent amidase/peptidase/peptodoglycan-binding domain-containing protein from clostridium acetobutylicum atcc 824 | 0.9551 | 380 | 443 |
| 6bxg-assembly1.cif.gz_A | 1.45 angstrom resolution crystal structure of pdz domain of carboxy-terminal protease from vibrio cholerae in complex with peptide. | 0.9269 | 106 | 194 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q5ZA08_147_239_2.30.42.10 | Mainly Beta;Roll;Pdz3 Domain;PDZ domain | 0.961 | 109 | 192 | 2.30.42.10 |
| 3bkvA01 | Mainly Alpha;Orthogonal Bundle;Muramoyl-pentapeptide Carboxypeptidase; domain 1;PGBD-like superfamily/PGBD | 0.946 | 381 | 445 | 1.10.101.10 |
| 4g54A02 | Mainly Alpha;Orthogonal Bundle;Muramoyl-pentapeptide Carboxypeptidase; domain 1;PGBD-like superfamily/PGBD | 0.9266 | 380 | 445 | 1.10.101.10 |
| 1fc6A02 | Mainly Beta;Roll;Pdz3 Domain;PDZ domain | 0.9223 | 109 | 194 | 2.30.42.10 |
| af_O23614_210_301_2.30.42.10 | Mainly Beta;Roll;Pdz3 Domain;PDZ domain | 0.9172 | 109 | 194 | 2.30.42.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A6M0FZN6-F1-model_v4 | Tetratricopeptide repeat protein | 0.9813 | 107 | 192 |
GO:0009279
GO:0046813 |
| AF-A0A315R617-F1-model_v4 | Peptidase M23 | 0.9777 | 380 | 450 |
GO:0008932
|
| AF-A0A0B4ZN63-F1-model_v4 | Serine protease | 0.9592 | 82 | 356 |
GO:0004175
GO:0006508 GO:0007165 GO:0008236 |
| AF-D6THZ6-F1-model_v4 | Peptidoglycan-binding domain 1 protein | 0.9525 | 381 | 453 |
|
| AF-R5LK79-F1-model_v4 | Carboxyl-terminal protease | 0.9521 | 41 | 375 |
GO:0004175
GO:0006508 GO:0007165 GO:0008236 GO:0016020 GO:0030288 |