F134420

General Info

Members Datasets Scaffolds Average Seq Length
127 110 95 336

Family's Representative Sequence

Representative Sequence 3300021377|Ga0213874_10012191|Ga0213874_100121912
Length 363
Sequence LIAPIAVNSWRFYAAAEIGLRPVSTHVRNFVNSGDLVLVAIPCFNEEEHIADILENLLAEGDEIRVRIVVADGGSTDRTRAIVEKFANEDGRVLLLDNPRRVQSVAVNEVVRVHGQDARFLLRVDAHAEYPRCYCEHLLAVRAATDADSVVVSMHTKGKSCFQRAHRNTTRDRWVDHGHHALMTLAAFKAVGGYDESFSHNEDAELDARLTEQGYRIFLTGEVPIVYYPRRNPVALFRQYFNIGRGRARNLLKHRRGAKLRHFVLAVVAPAILLLLLAPFVRAFALPALAWSLLCIGYGITLGVRLADPCAAASGLAAMMTQAGWSFGFWAEIVERFGQRAKPLVRHARKRFALLSNRGQIAP

Samples

Sample ID Description Type Environment
1 2510917026 Rhizobium sp. CF80 Isolate Rhizosphere
2 2597489875 Mesorhizobium ciceri ca181 Isolate Unclassified
3 2599185236 Rhizobium sp. NFR07 Isolate Rhizoplane
4 2600254933 Rhizobium sp. NFR12 Isolate Rhizoplane
5 2643221623 Aminobacter sp. DSM 101952 Root100 Isolate Unclassified
6 2657244999 Sinorhizobium sojae CCBAU 05684 Isolate Unclassified
7 2738541317 Rhizobium halophytocola DSM 21600 Isolate Unclassified
8 2765235802 Phyllobacterium bourgognense 31-25a Isolate Rhizoplane
9 2767802442 Phyllobacterium brassicacearum 29-15 Isolate Rhizoplane
10 2775506902 Phyllobacterium zundukense Tri-48 Isolate Unclassified
11 2775506904 Phyllobacterium zundukense Tri-38 Isolate Unclassified
12 2791355082 Ensifer alkalisoli YIC4027 Isolate Nodule
13 2818991461 Neorhizobium alkalisoli 1225 Isolate Unclassified
14 2821123053 Rhizobium cellulosilyticum 1193 Isolate Unclassified
15 2838074704 Sinorhizobium terangae SEMIA 6460 Isolate Unclassified
16 2838736955 Rhizobium cellulosilyticum SEMIA 448 Isolate Nodule
17 2839993093 Phyllobacterium endophyticum PEPV15 Isolate Unclassified
18 2841840854 Rhizobium cellulosilyticum SEMIA 444 Isolate Nodule
19 2842140634 Rhizobium cellulosilyticum SEMIA 452 Isolate Nodule
20 2854916844 Neorhizobium huautlense DSM 21817 Isolate Unclassified
21 2856342000 Mesorhizobium sp. M5C.F.Cr.IN.023.01.1.1 Isolate Nodule
22 2857531043 Neorhizobium sp. R-72160 Isolate Unclassified
23 2899259804 Paracoccus aeridis JC501 Isolate Rhizosphere
24 2904578770 Phyllobacterium sp. 586 Isolate Unclassified
25 2913308742 Rhizobium halophytocola DSM 21600 Isolate Unclassified
26 2919119836 Phyllobacterium sp. 1468 Isolate Rhizosphere
27 2970524798 Mesorhizobium sp. M5C.F.Ca.ET.164.01.1.1 Isolate Nodule
28 2970540015 Mesorhizobium sp. M5C.F.Ca.IN.020.29.1.1 Isolate Nodule
29 2996310559 Mesorhizobium zhangyense CGMCC 1.15528 Isolate Unclassified
30 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
31 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
32 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
33 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
34 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
35 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
36 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
37 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
38 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
39 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
40 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
41 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
42 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
43 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
44 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
45 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
46 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
47 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
48 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
49 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
50 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
51 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
52 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
53 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
54 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
55 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
56 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
66 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
68 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
69 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
70 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
71 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
72 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
73 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
74 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
75 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
76 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
77 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
78 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
79 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
80 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
81 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
82 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
83 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
84 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
85 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
86 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
87 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
88 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
89 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
90 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
91 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
92 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
93 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
94 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
95 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
96 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
97 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
98 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
99 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
100 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
101 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
102 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
103 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
104 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
105 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
106 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
107 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
108 8018150411 Rhizobium straminoryzae SM12 Isolate Rhizosphere
109 8049293176 Ensifer alkalisoli YIC4027 Isolate Nodule
110 8057132660 Paracoccus rhizosphaerae LMG 21293 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 74.8
Metatranscriptomes 0
Isolates 25.2

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.87
Nodule 8.66
Rhizoplane 3.94
Rhizosphere 53.54
Stem 0
Stem Tuber 0
Unclassified 25.98

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10043886 3300003316 Bacteria 1500
2 Ga0070658_10229146 3300005327 Bacteria 1573
3 Ga0070666_10100321 3300005335 Bacteria 1994
4 Ga0070668_100014022 3300005347 Bacteria 5993
5 Ga0070667_100042913 3300005367 Bacteria 3794
6 Ga0070709_10000151 3300005434 Bacteria 45531
7 Ga0070713_100019742 3300005436 Bacteria 5156
8 Ga0070710_10000079 3300005437 Bacteria 43931
9 Ga0070678_100122005 3300005456 Bacteria 2057
10 Ga0070681_10421274 3300005458 Bacteria 1247
11 Ga0070698_100068476 3300005471 Plasmid 3566
12 Ga0070665_100000674 3300005548 Bacteria 45861
13 Ga0070665_100012492 3300005548 Bacteria 8558
14 Ga0068862_100030849 3300005844 Bacteria 4519
15 Ga0070717_10059872 3300006028 Bacteria 3152
16 Ga0070717_10069969 3300006028 Plasmid 2923
17 Ga0075365_10020408 3300006038 Bacteria 4107
18 Ga0070715_10013713 3300006163 Bacteria 2983
19 Ga0070716_100000432 3300006173 Bacteria 17408
20 Ga0079104_1000063 3300006946 Bacteria 159519
21 Ga0105248_10389496 3300009177 Bacteria 1569
22 Ga0157373_10214137 3300013100 Bacteria 1358
23 Ga0157378_10259338 3300013297 Bacteria 1667
24 Ga0214543_1000023 3300021327 Bacteria 240412
25 Ga0213874_10012191 3300021377 Bacteria 2199
26 Ga0213876_10004330 3300021384 Bacteria 7956
27 Ga0213875_10000244 3300021388 Bacteria 54467
28 Ga0209758_1027086 3300025297 Bacteria 2460
29 Ga0207692_10000120 3300025898 Bacteria 23535
30 Ga0207680_10157171 3300025903 Bacteria 1521
31 Ga0207699_10000407 3300025906 Bacteria 22135
32 Ga0207652_10288492 3300025921 Bacteria 1481
33 Ga0207700_10008214 3300025928 Bacteria 6449
34 Ga0207665_10007361 3300025939 Bacteria 7275
35 Ga0207711_10138494 3300025941 Bacteria 2188
36 Ga0207668_10000002 3300025972 Bacteria 209163
37 Ga0207658_10027531 3300025986 Bacteria 3994
38 Ga0209281_1000110 3300027111 Bacteria 215631
39 Ga0268266_10000887 3300028379 Bacteria 38753
40 Ga0268266_10003137 3300028379 Bacteria 16797
41 Ga0265320_10068372 3300031240 Bacteria 1679
42 Ga0265340_10001230 3300031247 Bacteria 14667
43 Ga0265339_10093365 3300031249 Bacteria 1574
44 Ga0265314_10018525 3300031711 Bacteria 5426
45 Ga0265314_10026314 3300031711 Bacteria 4372
46 Ga0265314_10058170 3300031711 Bacteria 2650
47 Ga0265342_10000024 3300031712 Bacteria 171500
48 Ga0307516_10032127 3300031730 Bacteria 5287
49 Ga0395899_0023509 3300037312 Bacteria 4667
50 Ga0395898_0089765 3300037466 Bacteria 2957
51 Ga0436364_1097450 3300037853 Bacteria 76851
52 Ga0395901_0009197 3300038443 Bacteria 10010
53 Ga0436365_0857014 3300039437 Bacteria 61108
54 Ga0436363_0743291 3300039450 Unclassified 1835
55 Ga0436363_1229160 3300039450 Bacteria 13139
56 Ga0439438_041258 3300041405 Bacteria 1197
57 Ga0495664_0122875 3300046477 Bacteria 1570
58 Ga0495654_0000258 3300046530 Bacteria 48532
59 Ga0495645_0089557 3300046543 Bacteria 2200
60 Ga0495686_0117389 3300047472 Bacteria 1590
61 Ga0495686_0195034 3300047472 Bacteria 1165
62 Ga0496111_0040945 3300048914 Bacteria 3323
63 Ga0496121_0065235 3300048924 Bacteria 2964
64 Ga0496122_0000172 3300048925 Bacteria 153862
65 Ga0496123_0000132 3300048926 Bacteria 153568
66 Ga0496123_0011160 3300048926 Bacteria 7824
67 Ga0496124_0016545 3300048927 Bacteria 7003
68 Ga0496124_0064663 3300048927 Bacteria 3053
69 Ga0496124_0086092 3300048927 Bacteria 2573
70 Ga0496124_0151080 3300048927 Bacteria 1822
71 Ga0496126_0027418 3300048929 Bacteria 5440
72 Ga0501032_0045216 3300049569 Bacteria 2979
73 Ga0501032_0050719 3300049569 Bacteria 2798
74 Ga0501033_0025824 3300049570 Bacteria 4423
75 Ga0501034_0067755 3300049571 Bacteria 3581
76 Ga0501036_0342342 3300049572 Unclassified 1249
77 Ga0501038_0000321 3300049574 Bacteria 41146
78 Ga0501038_0074618 3300049574 Bacteria 2869
79 Ga0501046_0010483 3300049580 Bacteria 7953
80 Ga0501047_0275537 3300049581 Bacteria 1528
81 Ga0501070_0200034 3300049586 Bacteria 1641
82 Ga0501035_0013280 3300049822 Bacteria 7601
83 Ga0501035_0064799 3300049822 Bacteria 3246
84 Ga0501044_0038706 3300049823 Bacteria 4979
85 Ga0501044_0294046 3300049823 Unclassified 1555
86 Ga0501044_0483580 3300049823 Unclassified 1141
87 Ga0495612_0039057 3300053078 Bacteria 1930
88 Ga0500643_009637 3300053087 Bacteria 3671
89 Ga0500583_0042451 3300053092 Bacteria 2073
90 Ga0500618_000045 3300053125 Bacteria 110042
91 Ga0500559_0000177 3300053136 Bacteria 50512
92 Ga0500616_0000324 3300053153 Bacteria 68394
93 Ga0500627_0113090 3300053158 Bacteria 1222
94 Ga0500636_0004043 3300053177 Bacteria 8277
95 Ga0500636_0077379 3300053177 Unclassified 1922

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046477 Ga0495664_0122875 Ga0495664_0122875_10_870 275
2 iso_pu_bacteria 2510917026 2511168496 281
3 3300005335 Ga0070666_10100321 Ga0070666_101003213 289
4 3300005367 Ga0070667_100042913 Ga0070667_1000429134 289
5 3300005548 Ga0070665_100000674 Ga0070665_10000067438 289
6 3300009177 Ga0105248_10389496 Ga0105248_103894962 289
7 3300025903 Ga0207680_10157171 Ga0207680_101571712 289
8 3300025941 Ga0207711_10138494 Ga0207711_101384944 289
9 3300025986 Ga0207658_10027531 Ga0207658_100275312 289
10 3300028379 Ga0268266_10000887 Ga0268266_100008876 289
11 3300049581 Ga0501047_0275537 Ga0501047_0275537_22_906 292
12 3300049822 Ga0501035_0013280 Ga0501035_0013280_6699_7583 292
13 3300053087 Ga0500643_009637 Ga0500643_009637_430_1530 293
14 3300005347 Ga0070668_100014022 Ga0070668_1000140226 298
15 3300005844 Ga0068862_100030849 Ga0068862_1000308493 298
16 3300025972 Ga0207668_10000002 Ga0207668_1000000285 298
17 3300053158 Ga0500627_0113090 Ga0500627_0113090_232_1200 299
18 3300053136 Ga0500559_0000177 Ga0500559_0000177_18374_19450 308
19 3300021384 Ga0213876_10004330 Ga0213876_100043307 312
20 3300039437 Ga0436365_0857014 Ga0436365_0857014_12861_13919 312
21 3300039450 Ga0436363_1229160 Ga0436363_1229160_7404_8462 312
22 3300039450 Ga0436363_0743291 Ga0436363_0743291_592_1710 315
23 3300053177 Ga0500636_0004043 Ga0500636_0004043_4079_5161 315
24 3300053177 Ga0500636_0077379 Ga0500636_0077379_121_1203 315
25 3300021377 Ga0213874_10012191 Ga0213874_100121912 316
26 3300049571 Ga0501034_0067755 Ga0501034_0067755_2393_3361 320
27 iso_pu_bacteria 8057132660 8057135979 320
28 3300049823 Ga0501044_0483580 Ga0501044_0483580_10_987 322
29 3300049574 Ga0501038_0000321 Ga0501038_0000321_29119_30093 323
30 iso_pu_bacteria 2643221623 2644130895 323
31 3300005471 Ga0070698_100068476 Ga0070698_1000684763 325
32 3300006028 Ga0070717_10069969 Ga0070717_100699692 325
33 3300031730 Ga0307516_10032127 Ga0307516_100321275 325
34 3300048929 Ga0496126_0027418 Ga0496126_0027418_3343_4344 325
35 iso_pu_bacteria 2657244999 2657685062 325
36 iso_pu_bacteria 2791355082 2792583626 325
37 iso_pu_bacteria 2838074704 2838079056 325
38 iso_pu_bacteria 8049293176 8049298019 325
39 3300048925 Ga0496122_0000172 Ga0496122_0000172_80885_81883 326
40 3300048926 Ga0496123_0000132 Ga0496123_0000132_80933_81931 326
41 3300048927 Ga0496124_0086092 Ga0496124_0086092_384_1382 326
42 iso_pu_bacteria 2854916844 2854921298 326
43 iso_pu_bacteria 2856342000 2856348201 326
44 iso_pu_bacteria 2970524798 2970525683 326
45 3300005434 Ga0070709_10000151 Ga0070709_1000015139 327
46 3300005436 Ga0070713_100019742 Ga0070713_1000197424 327
47 3300005437 Ga0070710_10000079 Ga0070710_1000007914 327
48 3300005548 Ga0070665_100012492 Ga0070665_1000124926 327
49 3300006028 Ga0070717_10059872 Ga0070717_100598722 327
50 3300006163 Ga0070715_10013713 Ga0070715_100137133 327
51 3300006173 Ga0070716_100000432 Ga0070716_1000004324 327
52 3300013297 Ga0157378_10259338 Ga0157378_102593382 327
53 3300025898 Ga0207692_10000120 Ga0207692_100001206 327
54 3300025906 Ga0207699_10000407 Ga0207699_100004075 327
55 3300025928 Ga0207700_10008214 Ga0207700_100082142 327
56 3300025939 Ga0207665_10007361 Ga0207665_100073614 327
57 3300028379 Ga0268266_10003137 Ga0268266_100031375 327
58 3300053153 Ga0500616_0000324 Ga0500616_0000324_10911_11921 327
59 iso_pu_bacteria 2738541317 2738948399 327
60 iso_pu_bacteria 2913308742 2913313188 327
61 iso_pu_bacteria 8018150411 8018152307 327
62 3300049569 Ga0501032_0045216 Ga0501032_0045216_1595_2629 328
63 3300049574 Ga0501038_0074618 Ga0501038_0074618_1443_2477 328
64 3300049580 Ga0501046_0010483 Ga0501046_0010483_2714_3748 328
65 3300049586 Ga0501070_0200034 Ga0501070_0200034_59_1093 328
66 3300049822 Ga0501035_0064799 Ga0501035_0064799_1883_2917 328
67 3300049823 Ga0501044_0038706 Ga0501044_0038706_2318_3352 328
68 iso_pu_bacteria 2899259804 2899261653 328
69 iso_pu_bacteria 2767802442 2770197234 329
70 iso_pu_bacteria 2775506902 2776272078 329
71 iso_pu_bacteria 2775506904 2776284018 329
72 iso_pu_bacteria 2839993093 2839993959 329
73 iso_pu_bacteria 2904578770 2904579335 329
74 iso_pu_bacteria 2919119836 2919121838 329
75 3300005327 Ga0070658_10229146 Ga0070658_102291462 330
76 3300005458 Ga0070681_10421274 Ga0070681_104212741 330
77 3300006038 Ga0075365_10020408 Ga0075365_100204083 330
78 3300021388 Ga0213875_10000244 Ga0213875_1000024421 330
79 3300025297 Ga0209758_1027086 Ga0209758_10270862 330
80 3300025921 Ga0207652_10288492 Ga0207652_102884922 330
81 3300031240 Ga0265320_10068372 Ga0265320_100683722 330
82 3300031247 Ga0265340_10001230 Ga0265340_100012304 330
83 3300031249 Ga0265339_10093365 Ga0265339_100933652 330
84 3300031711 Ga0265314_10018525 Ga0265314_100185255 330
85 3300031711 Ga0265314_10026314 Ga0265314_100263143 330
86 3300031711 Ga0265314_10058170 Ga0265314_100581702 330
87 3300031712 Ga0265342_10000024 Ga0265342_1000002494 330
88 3300037312 Ga0395899_0023509 Ga0395899_0023509_631_1671 330
89 3300037466 Ga0395898_0089765 Ga0395898_0089765_504_1544 330
90 3300037853 Ga0436364_1097450 Ga0436364_1097450_49585_50655 330
91 3300038443 Ga0395901_0009197 Ga0395901_0009197_5425_6465 330
92 3300046543 Ga0495645_0089557 Ga0495645_0089557_418_1458 330
93 3300048924 Ga0496121_0065235 Ga0496121_0065235_1525_2607 330
94 3300048927 Ga0496124_0016545 Ga0496124_0016545_172_1176 330
95 3300048927 Ga0496124_0064663 Ga0496124_0064663_1277_2317 330
96 3300049572 Ga0501036_0342342 Ga0501036_0342342_94_1092 330
97 3300049823 Ga0501044_0294046 Ga0501044_0294046_350_1390 330
98 3300053078 Ga0495612_0039057 Ga0495612_0039057_496_1536 330
99 3300053092 Ga0500583_0042451 Ga0500583_0042451_718_1758 330
100 iso_pu_bacteria 2599185236 2599719861 330
101 iso_pu_bacteria 2600254933 2600373437 330
102 iso_pu_bacteria 2818991461 2819686684 330
103 iso_pu_bacteria 2821123053 2821126380 330
104 iso_pu_bacteria 2838736955 2838737144 330
105 iso_pu_bacteria 2841840854 2841842487 330
106 iso_pu_bacteria 2842140634 2842142267 330
107 iso_pu_bacteria 2857531043 2857532941 330
108 iso_pu_bacteria 2996310559 2996312854 330
109 3300003316 rootH1_10043886 rootH1_100438862 331
110 3300005456 Ga0070678_100122005 Ga0070678_1001220052 331
111 3300006946 Ga0079104_1000063 Ga0079104_1000063131 331
112 3300013100 Ga0157373_10214137 Ga0157373_102141372 331
113 3300021327 Ga0214543_1000023 Ga0214543_1000023171 331
114 3300027111 Ga0209281_1000110 Ga0209281_1000110128 331
115 3300041405 Ga0439438_041258 Ga0439438_041258_125_1165 331
116 3300046530 Ga0495654_0000258 Ga0495654_0000258_22048_23136 331
117 3300047472 Ga0495686_0117389 Ga0495686_0117389_148_1185 331
118 3300047472 Ga0495686_0195034 Ga0495686_0195034_23_1069 331
119 3300048914 Ga0496111_0040945 Ga0496111_0040945_2217_3239 331
120 3300048926 Ga0496123_0011160 Ga0496123_0011160_3177_4199 331
121 3300048927 Ga0496124_0151080 Ga0496124_0151080_655_1677 331
122 3300049569 Ga0501032_0050719 Ga0501032_0050719_993_2021 331
123 3300049570 Ga0501033_0025824 Ga0501033_0025824_45_1073 331
124 3300053125 Ga0500618_000045 Ga0500618_000045_61148_62194 331
125 iso_pu_bacteria 2597489875 2597810602 331
126 iso_pu_bacteria 2765235802 2765464015 331
127 iso_pu_bacteria 2970540015 2970547111 331

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00535

Glycos_transf_2

Glycosyl transferase family 2

38

199

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
6p61-assembly3.cif.gz_C structure of a glycosyltransferase from leptospira borgpetersenii serovar hardjo-bovis (strain jb197) 0.7787 10 216
6p61-assembly2.cif.gz_B structure of a glycosyltransferase from leptospira borgpetersenii serovar hardjo-bovis (strain jb197) 0.7734 10 216
6p61-assembly3.cif.gz_C structure of a glycosyltransferase from leptospira borgpetersenii serovar hardjo-bovis (strain jb197) 0.7526 10 216
6p61-assembly2.cif.gz_B structure of a glycosyltransferase from leptospira borgpetersenii serovar hardjo-bovis (strain jb197) 0.7511 10 216
2z86-assembly1.cif.gz_A crystal structure of chondroitin polymerase from escherichia coli strain k4 (k4cp) complexed with udp-glcua and udp 0.741 11 240
ID Description Score Start End Superfamily
af_O05154_2_177_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8609 10 100 3.90.550.10
af_P9WMX1_74_289_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.7759 11 223 3.90.550.10
af_P75905_64_287_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.7705 7 221 3.90.550.10
af_Q9RQP9_29_257_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.7683 9 221 3.90.550.10
af_Q9U2C4_56_443_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.7542 10 221 3.90.550.10
ID Description Score Start End GO Terms
AF-A0A7G6VT09-F1-model_v4 Glycosyltransferase family 2 protein 0.965 9 324 GO:0016020
GO:0016757
AF-A0A4Q3LYU0-F1-model_v4 deleted 0.9591 10 197
AF-A0A1W6LEI9-F1-model_v4 Succinoglycan biosynthesis protein exoa 0.9562 8 324
AF-A0A3S1EY40-F1-model_v4 Glycosyltransferase 0.9544 2 178 GO:0016757
AF-A0A3S1EY40-F1-model_v4 Glycosyltransferase 0.9439 2 178 GO:0016757

Feature Viewer

pLDDT pTM Quality
89.75 0.86 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map