F128232

General Info

Members Datasets Scaffolds Average Seq Length
125 103 250 208

Family's Representative Sequence

Representative Sequence 3300049591|Ga0501075_0000170|Ga0501075_0000170_10758_11483
Length 241
Sequence VTAEAAAHPRLDYWRCNANAFEERHPPTLVREDAVVADSFKLVVLASGTGSNLQAILDQVHERDGVEVAGVGSDKPGAPALERAREARIPVGVFPTADFPDREARDVAMGDWIDALGADLVALAGYMQLLSKGFVARFRHRIVNVHPALLPAFPGLDAIGQALEAGVGVTGVTVHFVDEGVDTGPVLLQREVPVPADRDRAALEQAVHATEHELYPEAIRMIAAGRVRIEASDPRVVLVDE

Samples

Sample ID Description Type Environment
1 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
2 3300002074 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 Metagenome Rhizosphere
3 3300002244 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1 Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
12 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
13 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
14 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
15 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
16 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
17 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
18 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
19 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
20 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
21 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
22 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
23 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
24 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
25 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
26 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
27 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
28 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
29 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
30 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
31 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
32 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
33 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
34 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
35 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
57 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
58 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
59 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
60 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
61 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
62 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
63 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
64 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
65 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
66 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
67 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
68 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
69 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
70 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
71 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
72 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
73 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
74 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
75 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
76 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
77 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
78 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
79 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
80 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
81 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
82 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
83 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
84 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
85 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
86 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
87 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
88 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
89 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
90 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
91 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
92 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
93 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
94 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
95 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
96 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
97 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
98 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
99 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
100 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
101 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
102 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
103 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 8.8
Rhizosphere 90.4
Stem 0
Stem Tuber 0
Unclassified 0.8

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501075_0000170 3300049591 Bacteria 33818
2 JGI24748J21848_1002521 3300002074 Bacteria 2069
3 JGI24742J22300_10001681 3300002244 Bacteria 3526
4 Ga0070683_100118988 3300005329 Bacteria 2495
5 Ga0070677_10000027 3300005333 Bacteria 43465
6 Ga0070682_100000057 3300005337 Bacteria 108832
7 Ga0068868_100000864 3300005338 Bacteria 20513
8 Ga0070689_100061637 3300005340 Bacteria 2918
9 Ga0070691_10005930 3300005341 Bacteria 5573
10 Ga0070668_100189045 3300005347 Bacteria 1686
11 Ga0070674_100000003 3300005356 Bacteria 258221
12 Ga0070688_100403745 3300005365 Bacteria 1012
13 Ga0070667_100002036 3300005367 Bacteria 17915
14 Ga0070711_100018295 3300005439 Bacteria 4470
15 Ga0070662_100000005 3300005457 Bacteria 183056
16 Ga0070693_100013117 3300005547 Bacteria 4213
17 Ga0070665_100286382 3300005548 Bacteria 1650
18 Ga0068856_100026469 3300005614 Bacteria 5656
19 Ga0068852_100000103 3300005616 Bacteria 56542
20 Ga0068852_100125765 3300005616 Bacteria 2354
21 Ga0068864_100000066 3300005618 Bacteria 116383
22 Ga0068866_10000002 3300005718 Bacteria 394090
23 Ga0068866_10007750 3300005718 Bacteria 4505
24 Ga0068863_100000032 3300005841 Bacteria 172402
25 Ga0068862_100000689 3300005844 Bacteria 34498
26 Ga0081455_10053828 3300005937 Bacteria 3436
27 Ga0070715_10000012 3300006163 Bacteria 173731
28 Ga0070712_100230770 3300006175 Bacteria 1470
29 Ga0075433_10000175 3300006852 Bacteria 35454
30 Ga0105245_10000340 3300009098 Bacteria 44025
31 Ga0105245_10001556 3300009098 Bacteria 20821
32 Ga0105245_10797623 3300009098 Bacteria 982
33 Ga0105238_10000028 3300009551 Bacteria 188361
34 Ga0105249_10000073 3300009553 Bacteria 145660
35 Ga0157374_10352196 3300013296 Bacteria 1463
36 Ga0163163_10629285 3300014325 Bacteria 1136
37 Ga0157380_10002277 3300014326 Bacteria 12904
38 Ga0157379_10116475 3300014968 Bacteria 2403
39 Ga0157379_10154479 3300014968 Bacteria 2070
40 Ga0207682_10000003 3300025893 Bacteria 128548
41 Ga0207642_10000001 3300025899 Bacteria 714030
42 Ga0207642_10000003 3300025899 Bacteria 650651
43 Ga0207642_10000004 3300025899 Bacteria 407822
44 Ga0207642_10010592 3300025899 Bacteria 3258
45 Ga0207685_10000001 3300025905 Bacteria 604473
46 Ga0207693_10417963 3300025915 Bacteria 1048
47 Ga0207663_10147994 3300025916 Bacteria 1644
48 Ga0207694_10000008 3300025924 Bacteria 484902
49 Ga0207687_10000012 3300025927 Bacteria 370729
50 Ga0207706_10000006 3300025933 Bacteria 216994
51 Ga0207670_10056287 3300025936 Bacteria 2662
52 Ga0207669_10000016 3300025937 Bacteria 124532
53 Ga0207669_10000405 3300025937 Bacteria 18931
54 Ga0207712_10000003 3300025961 Bacteria 615314
55 Ga0207712_10009163 3300025961 Bacteria 6264
56 Ga0207658_10039679 3300025986 Bacteria 3397
57 Ga0207658_10470107 3300025986 Unclassified 1116
58 Ga0207677_10000760 3300026023 Bacteria 18586
59 Ga0207703_10209557 3300026035 Bacteria 1737
60 Ga0207702_10004938 3300026078 Bacteria 11718
61 Ga0207641_10000071 3300026088 Bacteria 151812
62 Ga0207641_10106471 3300026088 Bacteria 2479
63 Ga0207676_10000038 3300026095 Bacteria 171492
64 Ga0207683_10340723 3300026121 Bacteria 1375
65 Ga0207698_10000009 3300026142 Bacteria 281300
66 Ga0207698_10100388 3300026142 Bacteria 2397
67 Ga0268265_10036367 3300028380 Bacteria 3606
68 Ga0268264_10217385 3300028381 Bacteria 1758
69 Ga0265318_10174769 3300028577 Bacteria 786
70 Ga0265338_10000047 3300028800 Bacteria 220905
71 Ga0265325_10006638 3300031241 Bacteria 6999
72 Ga0265331_10012472 3300031250 Bacteria 4603
73 Ga0373957_0071491 3300035120 Bacteria 1358
74 Ga0373955_0146001 3300035172 Bacteria 1390
75 Ga0395898_0032831 3300037466 Bacteria 5182
76 Ga0395905_0073539 3300037471 Bacteria 3204
77 Ga0395901_0036055 3300038443 Bacteria 5110
78 Ga0495603_0001513 3300046455 Bacteria 13561
79 Ga0495638_0045715 3300046460 Bacteria 2753
80 Ga0495641_0020941 3300046461 Bacteria 3301
81 Ga0495653_0201379 3300046463 Bacteria 1351
82 Ga0495662_0000057 3300046476 Bacteria 38642
83 Ga0495662_0004757 3300046476 Bacteria 6804
84 Ga0495662_0076902 3300046476 Bacteria 1621
85 Ga0495662_0233604 3300046476 Bacteria 906
86 Ga0495618_0000003 3300046514 Bacteria 256269
87 Ga0495620_0000113 3300046515 Bacteria 64629
88 Ga0495628_0005170 3300046516 Bacteria 11470
89 Ga0495628_0007653 3300046516 Bacteria 9339
90 Ga0495640_0023322 3300046533 Bacteria 4510
91 Ga0495587_0010558 3300046536 Bacteria 5874
92 Ga0495598_0003162 3300046537 Bacteria 3468
93 Ga0495621_0003118 3300046539 Bacteria 4535
94 Ga0495645_0004432 3300046543 Bacteria 9588
95 Ga0495633_0023066 3300046558 Bacteria 3086
96 Ga0495635_0000009 3300046663 Bacteria 259024
97 Ga0495657_0024813 3300046675 Bacteria 4264
98 Ga0495647_0000319 3300046681 Bacteria 13543
99 Ga0495658_0000007 3300046683 Bacteria 139822
100 Ga0495669_0000213 3300046684 Bacteria 35060
101 Ga0495613_0000249 3300046689 Bacteria 50975
102 Ga0495613_0123449 3300046689 Bacteria 1858
103 Ga0495680_0000255 3300047322 Bacteria 58745
104 Ga0495675_0360735 3300047444 Bacteria 853
105 Ga0496100_0311500 3300048903 Bacteria 1180
106 Ga0496104_0000003 3300048907 Bacteria 669219
107 Ga0496105_0000008 3300048908 Bacteria 335652
108 Ga0496106_0065930 3300048909 Bacteria 2757
109 Ga0496108_0000002 3300048911 Bacteria 700890
110 Ga0496109_0000001 3300048912 Bacteria 700852
111 Ga0496111_0094090 3300048914 Bacteria 2198
112 Ga0496113_0012658 3300048916 Bacteria 5678
113 Ga0496113_0039702 3300048916 Bacteria 3466
114 Ga0496113_0181219 3300048916 Bacteria 1670
115 Ga0496114_0004811 3300048917 Bacteria 10519
116 Ga0496125_0043211 3300048928 Bacteria 3829
117 Ga0501042_0078761 3300049578 Bacteria 2360
118 Ga0501046_0393773 3300049580 Bacteria 1001
119 Ga0501081_0257909 3300049743 Bacteria 1273
120 Ga0501045_0595005 3300049824 Bacteria 819
121 nmdc:mga0a205_12_c2 3300050515 Bacteria 69190
122 Ga0495612_0000211 3300053078 Bacteria 24665
123 Ga0495619_0000024 3300053085 Bacteria 180821
124 Ga0495619_0001209 3300053085 Bacteria 16929
125 Ga0495619_0003003 3300053085 Bacteria 10951
126 Ga0501075_0000170
127 JGI24748J21848_1002521
128 JGI24742J22300_10001681
129 Ga0070683_100118988
130 Ga0070677_10000027
131 Ga0070682_100000057
132 Ga0068868_100000864
133 Ga0070689_100061637
134 Ga0070691_10005930
135 Ga0070668_100189045
136 Ga0070674_100000003
137 Ga0070688_100403745
138 Ga0070667_100002036
139 Ga0070711_100018295
140 Ga0070662_100000005
141 Ga0070693_100013117
142 Ga0070665_100286382
143 Ga0068856_100026469
144 Ga0068852_100000103
145 Ga0068852_100125765
146 Ga0068864_100000066
147 Ga0068866_10000002
148 Ga0068866_10007750
149 Ga0068863_100000032
150 Ga0068862_100000689
151 Ga0081455_10053828
152 Ga0070715_10000012
153 Ga0070712_100230770
154 Ga0075433_10000175
155 Ga0105245_10000340
156 Ga0105245_10001556
157 Ga0105245_10797623
158 Ga0105238_10000028
159 Ga0105249_10000073
160 Ga0157374_10352196
161 Ga0163163_10629285
162 Ga0157380_10002277
163 Ga0157379_10116475
164 Ga0157379_10154479
165 Ga0207682_10000003
166 Ga0207642_10000001
167 Ga0207642_10000003
168 Ga0207642_10000004
169 Ga0207642_10010592
170 Ga0207685_10000001
171 Ga0207693_10417963
172 Ga0207663_10147994
173 Ga0207694_10000008
174 Ga0207687_10000012
175 Ga0207706_10000006
176 Ga0207670_10056287
177 Ga0207669_10000016
178 Ga0207669_10000405
179 Ga0207712_10000003
180 Ga0207712_10009163
181 Ga0207658_10039679
182 Ga0207658_10470107
183 Ga0207677_10000760
184 Ga0207703_10209557
185 Ga0207702_10004938
186 Ga0207641_10000071
187 Ga0207641_10106471
188 Ga0207676_10000038
189 Ga0207683_10340723
190 Ga0207698_10000009
191 Ga0207698_10100388
192 Ga0268265_10036367
193 Ga0268264_10217385
194 Ga0265318_10174769
195 Ga0265338_10000047
196 Ga0265325_10006638
197 Ga0265331_10012472
198 Ga0373957_0071491
199 Ga0373955_0146001
200 Ga0395898_0032831
201 Ga0395905_0073539
202 Ga0395901_0036055
203 Ga0495603_0001513
204 Ga0495638_0045715
205 Ga0495641_0020941
206 Ga0495653_0201379
207 Ga0495662_0000057
208 Ga0495662_0004757
209 Ga0495662_0076902
210 Ga0495662_0233604
211 Ga0495618_0000003
212 Ga0495620_0000113
213 Ga0495628_0005170
214 Ga0495628_0007653
215 Ga0495640_0023322
216 Ga0495587_0010558
217 Ga0495598_0003162
218 Ga0495621_0003118
219 Ga0495645_0004432
220 Ga0495633_0023066
221 Ga0495635_0000009
222 Ga0495657_0024813
223 Ga0495647_0000319
224 Ga0495658_0000007
225 Ga0495669_0000213
226 Ga0495613_0000249
227 Ga0495613_0123449
228 Ga0495680_0000255
229 Ga0495675_0360735
230 Ga0496100_0311500
231 Ga0496104_0000003
232 Ga0496105_0000008
233 Ga0496106_0065930
234 Ga0496108_0000002
235 Ga0496109_0000001
236 Ga0496111_0094090
237 Ga0496113_0012658
238 Ga0496113_0039702
239 Ga0496113_0181219
240 Ga0496114_0004811
241 Ga0496125_0043211
242 Ga0501042_0078761
243 Ga0501046_0393773
244 Ga0501081_0257909
245 Ga0501045_0595005
246 nmdc:mga0a205_12_c2
247 Ga0495612_0000211
248 Ga0495619_0000024
249 Ga0495619_0001209
250 Ga0495619_0003003

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00551

Formyl_trans_N

Formyl transferase

40

219

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
1c2t-assembly1.cif.gz_A new insights into inhibitor design from the crystal structure and nmr studies of e. coli gar transformylase in complex with beta-gar and 10-formyl-5,8,10-trideazafolic acid. 0.9708 5 189
4s1n-assembly1.cif.gz_A the crystal structure of phosphoribosylglycinamide formyltransferase from streptococcus pneumoniae tigr4 0.9671 5 186
2ywr-assembly1.cif.gz_A crystal structure of gar transformylase from aquifex aeolicus 0.9658 4 189
3kcq-assembly2.cif.gz_D-3 crystal structure of phosphoribosylglycinamide formyltransferase from anaplasma phagocytophilum 0.9617 3 189
3av3-assembly1.cif.gz_A crystal structure of glycinamide ribonucleotide transformylase 1 from geobacillus kaustophilus 0.9616 3 186
ID Description Score Start End Superfamily
4s1nA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Formyl transferase, N-terminal domain 0.967 5 186 3.40.50.170
3aufA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Formyl transferase, N-terminal domain 0.9611 2 189 3.40.50.170
af_Q2FZI7_1_188_3.40.50.170 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Formyl transferase, N-terminal domain 0.9611 5 183 3.40.50.170
3kcqB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Formyl transferase, N-terminal domain 0.9608 3 189 3.40.50.170
af_Q20143_783_975_3.40.50.170 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Formyl transferase, N-terminal domain 0.9581 2 193 3.40.50.170
ID Description Score Start End GO Terms
AF-A0A6J7H122-F1-model_v4 phosphoribosylglycinamide formyltransferase 1 (EC 2.1.2.2) (5'-phosphoribosylglycinamide transformylase) (GAR transformylase) 0.9849 5 189 GO:0004644
GO:0005829
GO:0006189
AF-A0A538KWB2-F1-model_v4 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 0.9756 47 189 GO:0004644
GO:0005829
GO:0006189
AF-A0A357X2U8-F1-model_v4 deleted 0.9744 35 189
AF-A0A7W0G8W0-F1-model_v4 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 0.9736 6 186 GO:0004644
GO:0005829
GO:0006189
AF-A0A150TW20-F1-model_v4 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 0.9736 31 189 GO:0004644
GO:0005829
GO:0006189

Map