F123651

General Info

Members Datasets Scaffolds Average Seq Length
124 97 248 488

Family's Representative Sequence

Representative Sequence 3300045976|Ga0466967_0097937|Ga0466967_0097937_898_2433
Length 511
Sequence MTQLNASTLARLDDRVAVPAYDRGSVTGGIVHFGVGGFHRAHQAMYVDTLMNAGEALDWGITGVGLLPGDRRMKEALSAQDCLYTLVVKDPDGTMHPRVIGSIVDYLYAPDDPEAVLEVMSDSSTRVVSLTITEGGYVVNQATGEFDAEDPSIQADLAEDAVPATAFGFIVEALRRRRDAGVDPFTVMSCDNIQGNGEVAHKMIGAFARLKDPDLAAWLEENVPFPNSMVDRITPVTTDHDREVLAEQFGVEDAWPVVCEPFTQWALEDRFPTGRPPYDHAGVQLVPDVTPYELMKLRLLNASHQALCYLGYLSGYRYAHEVCSDPLFTGFLLGYMDQEGTPTLQPVPGVDLDAYKHELIERFANPEIRDTLARLCAESSDRIPKWLVPVIRRNLATGGPVRRSALVVASWARYAEGVDERGEPIEIVDRRKDAVTARAAQQRDDPLAFLRDPDLFGDLAEQGRFTEEYVAALESLHRHGARATLEAWEQPDGPAAGPEAATGPSRTDQGR

Samples

Sample ID Description Type Environment
1 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
2 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
3 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
4 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
5 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
6 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
7 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
8 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
9 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
10 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
11 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
12 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
13 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
14 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
15 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
16 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
17 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
18 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
19 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
20 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
25 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
28 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
29 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
30 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
31 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
32 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
33 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
34 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
35 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
36 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
37 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
38 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
39 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
40 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
41 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
42 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
43 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
44 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
45 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
46 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
47 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
48 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
49 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
50 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
51 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
52 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
53 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
54 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
55 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
56 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
57 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
58 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
59 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
60 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
61 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
62 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
63 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
64 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
65 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
66 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
67 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
68 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
69 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
70 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
71 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
72 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
73 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
74 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
75 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
76 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
77 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
78 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
79 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
80 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
81 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
82 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
83 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
84 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
85 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
86 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
87 2728369276 Kineococcus rhizosphaerae DSM 19711 Isolate Rhizosphere
88 2808606394 Promicromonospora sp. C35 Isolate Unclassified
89 2816332119 Kribbella amoyensis DSM 24683 Isolate Rhizosphere
90 2862993130 Planctomonas deserti 13S1-3 v2 Isolate Rhizosphere
91 2915358134 Pseudonocardia pini CAP47R Isolate Unclassified
92 2919395869 Microbacterium resistens 2980 Isolate Unclassified
93 2939598168 Arthrobacter sp. 754 Isolate Rhizosphere
94 2945956166 Arthrobacter globiformus W2I3 Isolate Rhizosphere
95 2952252522 Salinicola sp. DM10 Isolate Unclassified
96 2964326757 Planctomonas psychrotolerans J5903 Isolate Rhizosphere
97 8054472261 Pseudonocardia terrae RS11V-5 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 91.13
Metatranscriptomes 0
Isolates 8.87

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.81
Nodule 0
Rhizoplane 5.65
Rhizosphere 78.23
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466967_0097937 3300045976 Bacteria 2677
2 Ga0070671_100000270 3300005355 Bacteria 35025
3 Ga0070678_100063230 3300005456 Bacteria 2737
4 Ga0070665_100129572 3300005548 Bacteria 2525
5 Ga0068862_100048998 3300005844 Bacteria 3608
6 Ga0081455_10020321 3300005937 Bacteria 6259
7 Ga0081540_1000357 3300005983 Bacteria 46070
8 Ga0081539_10000359 3300005985 Bacteria 100242
9 Ga0081539_10007598 3300005985 Bacteria 9796
10 Ga0081539_10044735 3300005985 Bacteria 2553
11 Ga0081539_10054066 3300005985 Bacteria 2244
12 Ga0070717_10016766 3300006028 Bacteria 5686
13 Ga0075432_10001269 3300006058 Bacteria 8145
14 Ga0075428_100009519 3300006844 Bacteria 10787
15 Ga0114129_10012656 3300009147 Bacteria 12012
16 Ga0105242_10045180 3300009176 Bacteria 3569
17 Ga0105248_10257107 3300009177 Bacteria 1966
18 Ga0105249_10181229 3300009553 Bacteria 2049
19 Ga0105246_10059702 3300011119 Bacteria 2647
20 Ga0157374_10216184 3300013296 Bacteria 1880
21 Ga0157372_10093493 3300013307 Bacteria 3422
22 Ga0163163_10051605 3300014325 Bacteria 4055
23 Ga0207687_10034175 3300025927 Bacteria 3452
24 Ga0207709_10107544 3300025935 Bacteria 1858
25 Ga0207679_10015463 3300025945 Bacteria 5043
26 Ga0207668_10002790 3300025972 Bacteria 10216
27 Ga0207668_10080730 3300025972 Bacteria 2357
28 Ga0207702_10088655 3300026078 Bacteria 2703
29 Ga0207683_10035627 3300026121 Bacteria 4329
30 Ga0268266_10105675 3300028379 Bacteria 2488
31 Ga0268265_10036666 3300028380 Bacteria 3593
32 Ga0307517_10111997 3300028786 Bacteria 2070
33 Ga0307515_10002811 3300028794 Bacteria 37032
34 Ga0307515_10022753 3300028794 Bacteria 11028
35 Ga0307515_10153210 3300028794 Bacteria 2397
36 Ga0307512_10003841 3300030522 Bacteria 16919
37 Ga0307512_10016330 3300030522 Bacteria 6853
38 Ga0307513_10018590 3300031456 Bacteria 8298
39 Ga0307509_10025049 3300031507 Bacteria 6669
40 Ga0307508_10042694 3300031616 Bacteria 4066
41 Ga0307508_10098528 3300031616 Bacteria 2517
42 Ga0307508_10107640 3300031616 Bacteria 2387
43 Ga0316576_10014110 3300031727 Bacteria 5329
44 Ga0307516_10012234 3300031730 Bacteria 9266
45 Ga0307516_10012688 3300031730 Bacteria 9060
46 Ga0307405_10004232 3300031731 Bacteria 6751
47 Ga0307405_10061627 3300031731 Bacteria 2372
48 Ga0307413_10015213 3300031824 Bacteria 3936
49 Ga0307413_10079668 3300031824 Bacteria 2094
50 Ga0307410_10018539 3300031852 Bacteria 4208
51 Ga0307410_10052869 3300031852 Bacteria 2746
52 Ga0307406_10006393 3300031901 Bacteria 6500
53 Ga0307406_10032093 3300031901 Bacteria 3203
54 Ga0307407_10012854 3300031903 Bacteria 4042
55 Ga0307412_10023902 3300031911 Bacteria 3767
56 Ga0307409_100015341 3300031995 Bacteria 5025
57 Ga0307416_100177823 3300032002 Bacteria 1990
58 Ga0307415_100106201 3300032126 Bacteria 2072
59 Ga0373942_0000077 3300035207 Bacteria 20877
60 Ga0373962_0004229 3300035242 Bacteria 3462
61 Ga0395900_0146964 3300037418 Bacteria 2410
62 Ga0436365_0174952 3300039437 Bacteria 2580
63 Ga0466972_0019029 3300044658 Bacteria 3433
64 Ga0466970_0013512 3300044765 Bacteria 4187
65 Ga0466957_0021854 3300044842 Bacteria 3772
66 Ga0466960_0011721 3300044901 Bacteria 3679
67 Ga0466960_0016578 3300044901 Bacteria 3199
68 Ga0466960_0034541 3300044901 Bacteria 2357
69 Ga0466967_0080933 3300045976 Bacteria 2933
70 Ga0466967_0134101 3300045976 Bacteria 2302
71 Ga0466967_0306394 3300045976 Bacteria 1529
72 Ga0495638_0095419 3300046460 Bacteria 1786
73 Ga0495651_0001584 3300046462 Bacteria 17573
74 Ga0495628_0071339 3300046516 Bacteria 2707
75 Ga0495632_0023954 3300046519 Bacteria 3251
76 Ga0495644_0060656 3300046523 Bacteria 1422
77 Ga0495634_0121606 3300046642 Bacteria 1671
78 Ga0495646_0009091 3300046680 Bacteria 6300
79 Ga0496101_0067923 3300048904 Bacteria 2604
80 Ga0496102_0124354 3300048905 Bacteria 2410
81 Ga0496104_0112356 3300048907 Bacteria 2613
82 Ga0496105_0047096 3300048908 Bacteria 3558
83 Ga0496105_0130425 3300048908 Bacteria 2073
84 Ga0496109_0208635 3300048912 Bacteria 1837
85 Ga0496115_0045153 3300048918 Bacteria 3517
86 Ga0496126_0052943 3300048929 Bacteria 3685
87 Ga0501031_0047108 3300049568 Bacteria 2810
88 Ga0501033_0001694 3300049570 Bacteria 19289
89 Ga0501033_0006516 3300049570 Bacteria 9136
90 Ga0501033_0024096 3300049570 Bacteria 4593
91 Ga0501034_0052035 3300049571 Bacteria 4128
92 Ga0501036_0037215 3300049572 Bacteria 4117
93 Ga0501037_0037524 3300049573 Bacteria 3572
94 Ga0501039_0024036 3300049575 Bacteria 4680
95 Ga0501042_0003819 3300049578 Bacteria 9520
96 Ga0501043_0018297 3300049579 Bacteria 5494
97 Ga0501046_0002448 3300049580 Bacteria 17403
98 Ga0501047_0056434 3300049581 Bacteria 3798
99 Ga0501047_0057253 3300049581 Bacteria 3769
100 Ga0501067_0026586 3300049583 Bacteria 3205
101 Ga0501067_0028066 3300049583 Bacteria 3119
102 Ga0501070_0087460 3300049586 Bacteria 2579
103 Ga0501083_0000028 3300049744 Bacteria 115481
104 Ga0501083_0008312 3300049744 Bacteria 7341
105 Ga0501044_0028334 3300049823 Bacteria 5912
106 Ga0501044_0132307 3300049823 Bacteria 2488
107 Ga0501044_0246517 3300049823 Bacteria 1729
108 Ga0501045_0124692 3300049824 Bacteria 1913
109 nmdc:mga05p37_128268_c1 3300050507 Bacteria 3114
110 Ga0495612_0003152 3300053078 Bacteria 6830
111 Ga0495595_0014971 3300053084 Bacteria 3301
112 Ga0500652_030852 3300053131 Bacteria 2098
113 Ga0530510_0059241 3300061734 Bacteria 2770
114 2729907730 2728369276 Bacteria 5610032
115 2809029797 2808606394 Bacteria 6248540
116 2816423675 2816332119 Bacteria 8120218
117 2862993966 2862993130 Bacteria 3860849
118 2915363652 2915358134 Bacteria 6050864
119 2919396893 2919395869 Bacteria 3704152
120 2939602018 2939598168 Bacteria 4687164
121 2945957621 2945956166 Bacteria 5110334
122 2952253725 2952252522 Bacteria 4171745
123 2964329037 2964326757 Bacteria 3290868
124 8054474706 8054472261 Bacteria 7464355
125 Ga0466967_0097937
126 Ga0070671_100000270
127 Ga0070678_100063230
128 Ga0070665_100129572
129 Ga0068862_100048998
130 Ga0081455_10020321
131 Ga0081540_1000357
132 Ga0081539_10000359
133 Ga0081539_10007598
134 Ga0081539_10044735
135 Ga0081539_10054066
136 Ga0070717_10016766
137 Ga0075432_10001269
138 Ga0075428_100009519
139 Ga0114129_10012656
140 Ga0105242_10045180
141 Ga0105248_10257107
142 Ga0105249_10181229
143 Ga0105246_10059702
144 Ga0157374_10216184
145 Ga0157372_10093493
146 Ga0163163_10051605
147 Ga0207687_10034175
148 Ga0207709_10107544
149 Ga0207679_10015463
150 Ga0207668_10002790
151 Ga0207668_10080730
152 Ga0207702_10088655
153 Ga0207683_10035627
154 Ga0268266_10105675
155 Ga0268265_10036666
156 Ga0307517_10111997
157 Ga0307515_10002811
158 Ga0307515_10022753
159 Ga0307515_10153210
160 Ga0307512_10003841
161 Ga0307512_10016330
162 Ga0307513_10018590
163 Ga0307509_10025049
164 Ga0307508_10042694
165 Ga0307508_10098528
166 Ga0307508_10107640
167 Ga0316576_10014110
168 Ga0307516_10012234
169 Ga0307516_10012688
170 Ga0307405_10004232
171 Ga0307405_10061627
172 Ga0307413_10015213
173 Ga0307413_10079668
174 Ga0307410_10018539
175 Ga0307410_10052869
176 Ga0307406_10006393
177 Ga0307406_10032093
178 Ga0307407_10012854
179 Ga0307412_10023902
180 Ga0307409_100015341
181 Ga0307416_100177823
182 Ga0307415_100106201
183 Ga0373942_0000077
184 Ga0373962_0004229
185 Ga0395900_0146964
186 Ga0436365_0174952
187 Ga0466972_0019029
188 Ga0466970_0013512
189 Ga0466957_0021854
190 Ga0466960_0011721
191 Ga0466960_0016578
192 Ga0466960_0034541
193 Ga0466967_0080933
194 Ga0466967_0134101
195 Ga0466967_0306394
196 Ga0495638_0095419
197 Ga0495651_0001584
198 Ga0495628_0071339
199 Ga0495632_0023954
200 Ga0495644_0060656
201 Ga0495634_0121606
202 Ga0495646_0009091
203 Ga0496101_0067923
204 Ga0496102_0124354
205 Ga0496104_0112356
206 Ga0496105_0047096
207 Ga0496105_0130425
208 Ga0496109_0208635
209 Ga0496115_0045153
210 Ga0496126_0052943
211 Ga0501031_0047108
212 Ga0501033_0001694
213 Ga0501033_0006516
214 Ga0501033_0024096
215 Ga0501034_0052035
216 Ga0501036_0037215
217 Ga0501037_0037524
218 Ga0501039_0024036
219 Ga0501042_0003819
220 Ga0501043_0018297
221 Ga0501046_0002448
222 Ga0501047_0056434
223 Ga0501047_0057253
224 Ga0501067_0026586
225 Ga0501067_0028066
226 Ga0501070_0087460
227 Ga0501083_0000028
228 Ga0501083_0008312
229 Ga0501044_0028334
230 Ga0501044_0132307
231 Ga0501044_0246517
232 Ga0501045_0124692
233 nmdc:mga05p37_128268_c1
234 Ga0495612_0003152
235 Ga0495595_0014971
236 Ga0500652_030852
237 Ga0530510_0059241
238 2729907730
239 2809029797
240 2816423675
241 2862993966
242 2915363652
243 2919396893
244 2939602018
245 2945957621
246 2952253725
247 2964329037
248 8054474706

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08125

Mannitol_dh_C

Mannitol dehydrogenase C-terminal domain

288

477

0.99

PF01232

Mannitol_dh

Mannitol dehydrogenase Rossmann domain

28

280

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
1lj8-assembly1.cif.gz_A crystal structure of mannitol dehydrogenase in complex with nad 0.962 5 499
1lj8-assembly1.cif.gz_A crystal structure of mannitol dehydrogenase in complex with nad 0.9506 5 499
4im7-assembly1.cif.gz_A crystal structure of fructuronate reductase (ydfi) from e. coli cft073 (efi target efi-506389) complexed with nadh and d-mannonate 0.9456 21 497
7rk5-assembly1.cif.gz_B mannitol-2-dehydrogenase bound to nadh from aspergillus fumigatus 0.9437 5 496
4im7-assembly1.cif.gz_A crystal structure of fructuronate reductase (ydfi) from e. coli cft073 (efi target efi-506389) complexed with nadh and d-mannonate 0.9265 21 497
ID Description Score Start End Superfamily
af_P0CX09_295_502_1.10.1040.10 Mainly Alpha;Orthogonal Bundle;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.9782 297 501 1.10.1040.10
af_P0CX08_10_294_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9714 5 295 3.40.50.720
af_P39160_282_486_1.10.1040.10 Mainly Alpha;Orthogonal Bundle;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.9659 297 494 1.10.1040.10
1m2wA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9638 5 295 3.40.50.720
4im7A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9606 21 295 3.40.50.720
ID Description Score Start End GO Terms
AF-U0FE71-F1-model_v4 deleted 0.9956 345 499
AF-A0A7Y9DKW1-F1-model_v4 Mannitol 2-dehydrogenase (EC 1.1.1.67) 0.9919 1 499 GO:0019594
GO:0050086
AF-A0A3D3BP59-F1-model_v4 Mannitol dehydrogenase 0.9911 273 500 GO:0016616
AF-A0A6G3VAL8-F1-model_v4 deleted 0.9911 305 498
AF-A0A7Y9DKW1-F1-model_v4 Mannitol 2-dehydrogenase (EC 1.1.1.67) 0.9879 1 499 GO:0019594
GO:0050086

Map