F119318

General Info

Members Datasets Scaffolds Average Seq Length
123 98 246 247

Family's Representative Sequence

Representative Sequence 3300039062|Ga0400483_005814|Ga0400483_005814_13258_14109
Length 283
Sequence VTGEPNSYEQLPTIDLTRDPHPLRGRAALVTGVSRRIGIGFATARRLVALGASVAIHHHRPHDADQPWGADPGGPEAVVDGVAAARALTTTQAVAVAADLAEPDGPVGVMTAAVEAVGSIDILVCNHARSGSDGPLGTLDADMLDSHWAVNTRSTLLLVQEFAARHDGRPGGRVILLTSGQNQGPMPDELAYATSKGALVAITPTLADALADREITVNTVNPGPVDTGWASPELLEQIRPAFPAGRWGEPDDPARLIAWLVTDEARWITGQVINTEGGFRRWR

Samples

Sample ID Description Type Environment
1 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
2 3300002074 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 Metagenome Rhizosphere
3 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
4 3300002244 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1 Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
7 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
8 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
9 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
10 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
11 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
12 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
13 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
14 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
15 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
16 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
17 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
18 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
19 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
20 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
21 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
22 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
23 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
24 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
25 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
26 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
27 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
36 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
38 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
39 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
40 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
41 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
42 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
43 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
44 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
45 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
46 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
47 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
48 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
49 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
50 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
51 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
52 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
53 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
54 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
55 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
56 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
57 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
58 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
59 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
60 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
61 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
62 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
63 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
64 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
65 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
66 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
67 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
68 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
69 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
70 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
71 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
72 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
73 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
74 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
75 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
76 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
77 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
78 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
79 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
80 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
81 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
82 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
83 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
84 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
85 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
86 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
87 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
88 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
89 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
90 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
91 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
92 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
93 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
94 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
95 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
96 2891326441 Actinokineospora pegani TRM65233 Isolate Unclassified
97 3002998708 Actinomadura barringtoniae GKU 128 Isolate Unclassified
98 8053945823 Actinomadura terrae OS3-83 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.56
Metatranscriptomes 0
Isolates 2.44

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.81
Nodule 0
Rhizoplane 6.5
Rhizosphere 76.42
Stem 0
Stem Tuber 0
Unclassified 13.01

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0400483_005814 3300039062 Bacteria 36939
2 JGI24748J21848_1000204 3300002074 Bacteria 7562
3 JGI24034J26672_10000150 3300002239 Bacteria 9967
4 JGI24742J22300_10003528 3300002244 Bacteria 2541
5 Ga0070683_100154066 3300005329 Unclassified 2179
6 Ga0070714_100002804 3300005435 Bacteria 12862
7 Ga0070679_100095538 3300005530 Bacteria 2960
8 Ga0070684_100041846 3300005535 Unclassified 3952
9 Ga0070686_100055024 3300005544 Bacteria 2547
10 Ga0070665_100025228 3300005548 Bacteria 5989
11 Ga0070665_100213235 3300005548 Bacteria 1932
12 Ga0070665_100278763 3300005548 Bacteria 1673
13 Ga0070717_10081648 3300006028 Bacteria 2714
14 Ga0070717_10123316 3300006028 Bacteria 2222
15 Ga0070717_10200461 3300006028 Unclassified 1748
16 Ga0075428_100076142 3300006844 Bacteria 3664
17 Ga0075434_100059145 3300006871 Bacteria 3810
18 Ga0105244_10053538 3300009036 Bacteria 2050
19 Ga0105240_10495887 3300009093 Bacteria 1359
20 Ga0111539_10060328 3300009094 Bacteria 4495
21 Ga0105247_10392098 3300009101 Bacteria 987
22 Ga0114129_11053168 3300009147 Bacteria 1021
23 Ga0105242_10000010 3300009176 Bacteria 151649
24 Ga0105237_10500138 3300009545 Bacteria 1222
25 Ga0105238_10169579 3300009551 Bacteria 2158
26 Ga0105239_10025653 3300010375 Bacteria 6491
27 Ga0157372_10049615 3300013307 Bacteria 4668
28 Ga0157375_10017843 3300013308 Bacteria 6419
29 Ga0163163_10174271 3300014325 Bacteria 2197
30 Ga0157380_10000408 3300014326 Bacteria 26076
31 Ga0207707_10011523 3300025912 Bacteria 7700
32 Ga0207695_10347192 3300025913 Bacteria 1371
33 Ga0207652_10033096 3300025921 Unclassified 4351
34 Ga0207664_10002716 3300025929 Bacteria 11736
35 Ga0207686_10000107 3300025934 Bacteria 67766
36 Ga0207691_10174745 3300025940 Bacteria 1879
37 Ga0207676_10186146 3300026095 Bacteria 1823
38 Ga0207698_10360990 3300026142 Bacteria 1376
39 Ga0207428_10104623 3300027907 Bacteria 2184
40 Ga0268266_10001032 3300028379 Bacteria 35051
41 Ga0268266_10120805 3300028379 Bacteria 2331
42 Ga0268266_10509886 3300028379 Bacteria 1149
43 Ga0307413_10001603 3300031824 Bacteria 8739
44 Ga0307413_10073873 3300031824 Bacteria 2157
45 Ga0307413_10214086 3300031824 Bacteria 1402
46 Ga0307410_10389034 3300031852 Bacteria 1124
47 Ga0307406_10117471 3300031901 Bacteria 1843
48 Ga0307406_10316117 3300031901 Bacteria 1206
49 Ga0307409_100190497 3300031995 Bacteria 1825
50 Ga0307416_100231086 3300032002 Bacteria 1783
51 Ga0307415_100135568 3300032126 Bacteria 1872
52 Ga0307415_100183802 3300032126 Bacteria 1643
53 Ga0395905_0796646 3300037471 Bacteria 848
54 Ga0436364_0504722 3300037853 Bacteria 8555
55 Ga0436364_1030723 3300037853 Bacteria 10783
56 Ga0400483_182325 3300039062 Bacteria 71334
57 Ga0436365_1278068 3300039437 Bacteria 7956
58 Ga0436363_0219355 3300039450 Bacteria 1736
59 Ga0436363_0563348 3300039450 Unclassified 1583
60 Ga0436363_0968293 3300039450 Bacteria 1438
61 Ga0436363_1118985 3300039450 Bacteria 1568
62 Ga0436362_0837632 3300039453 Unclassified 1112
63 Ga0439446_0052012 3300042156 Bacteria 1225
64 Ga0466969_0096664 3300044656 Bacteria 1394
65 Ga0466972_0039207 3300044658 Bacteria 2312
66 Ga0466972_0067905 3300044658 Bacteria 1703
67 Ga0466965_0054170 3300044683 Bacteria 1994
68 Ga0466961_0287448 3300044693 Bacteria 1006
69 Ga0466958_0088024 3300045836 Unclassified 1918
70 Ga0466967_0250720 3300045976 Bacteria 1691
71 Ga0495641_0049771 3300046461 Bacteria 1917
72 Ga0495653_0046023 3300046463 Unclassified 3379
73 Ga0495662_0224761 3300046476 Bacteria 925
74 Ga0495608_0003341 3300046511 Bacteria 11472
75 Ga0495628_0563651 3300046516 Archaea 817
76 Ga0495630_0000007 3300046517 Bacteria 376915
77 Ga0495640_0192493 3300046533 Unclassified 1296
78 Ga0495640_0212058 3300046533 Bacteria 1224
79 Ga0495667_0004617 3300046559 Bacteria 9312
80 Ga0495635_0079968 3300046663 Unclassified 2237
81 Ga0495657_0029448 3300046675 Bacteria 3850
82 Ga0495647_0002362 3300046681 Bacteria 5932
83 Ga0495624_0000241 3300046690 Bacteria 42989
84 Ga0495624_0000455 3300046690 Bacteria 32215
85 Ga0495600_0129749 3300046809 Unclassified 1639
86 Ga0495604_0171168 3300047317 Archaea 1527
87 Ga0495676_0182264 3300047321 Bacteria 1471
88 Ga0495680_0001665 3300047322 Bacteria 23636
89 Ga0495675_0169977 3300047444 Unclassified 1339
90 Ga0495684_0102091 3300047471 Unclassified 2168
91 Ga0495602_0039316 3300048088 Unclassified 4358
92 Ga0496102_0143753 3300048905 Bacteria 2237
93 Ga0496102_0286552 3300048905 Bacteria 1552
94 Ga0496104_0230363 3300048907 Bacteria 1764
95 Ga0496105_0058564 3300048908 Bacteria 3179
96 Ga0496109_0004240 3300048912 Bacteria 11972
97 Ga0496112_0613212 3300048915 Bacteria 1019
98 Ga0496113_0041731 3300048916 Bacteria 3387
99 Ga0496113_0262501 3300048916 Bacteria 1380
100 Ga0496116_0000680 3300048919 Bacteria 44185
101 Ga0496117_0013137 3300048920 Bacteria 7246
102 Ga0496117_0130156 3300048920 Bacteria 1527
103 Ga0496117_0168295 3300048920 Bacteria 1275
104 Ga0496118_0002923 3300048921 Bacteria 22202
105 Ga0496118_0042928 3300048921 Bacteria 3561
106 Ga0496119_0001947 3300048922 Bacteria 23515
107 Ga0496119_0299203 3300048922 Bacteria 794
108 Ga0496125_0018848 3300048928 Bacteria 6534
109 Ga0501034_0200155 3300049571 Bacteria 1956
110 Ga0501047_0184300 3300049581 Bacteria 1953
111 Ga0501080_0154314 3300049742 Bacteria 2121
112 nmdc:mga05p37_969823_c1 3300050507 Bacteria 907
113 nmdc:mga06r32_467342_c1 3300050510 Bacteria 1240
114 nmdc:mga08y16_63521_c1 3300050511 Bacteria 3856
115 nmdc:mga0n895_34274_c1 3300050512 Bacteria 4885
116 Ga0500635_0000179 3300053080 Bacteria 32628
117 Ga0495595_0011591 3300053084 Unclassified 3690
118 Ga0495619_0000021 3300053085 Bacteria 187095
119 Ga0495619_0096510 3300053085 Unclassified 2007
120 Ga0501082_0408034 3300060353 Bacteria 1186
121 2891327064 2891326441 Bacteria 6439512
122 3003003816 3002998708 Bacteria 11715108
123 8053949977 8053945823 Bacteria 8962862
124 Ga0400483_005814
125 JGI24748J21848_1000204
126 JGI24034J26672_10000150
127 JGI24742J22300_10003528
128 Ga0070683_100154066
129 Ga0070714_100002804
130 Ga0070679_100095538
131 Ga0070684_100041846
132 Ga0070686_100055024
133 Ga0070665_100025228
134 Ga0070665_100213235
135 Ga0070665_100278763
136 Ga0070717_10081648
137 Ga0070717_10123316
138 Ga0070717_10200461
139 Ga0075428_100076142
140 Ga0075434_100059145
141 Ga0105244_10053538
142 Ga0105240_10495887
143 Ga0111539_10060328
144 Ga0105247_10392098
145 Ga0114129_11053168
146 Ga0105242_10000010
147 Ga0105237_10500138
148 Ga0105238_10169579
149 Ga0105239_10025653
150 Ga0157372_10049615
151 Ga0157375_10017843
152 Ga0163163_10174271
153 Ga0157380_10000408
154 Ga0207707_10011523
155 Ga0207695_10347192
156 Ga0207652_10033096
157 Ga0207664_10002716
158 Ga0207686_10000107
159 Ga0207691_10174745
160 Ga0207676_10186146
161 Ga0207698_10360990
162 Ga0207428_10104623
163 Ga0268266_10001032
164 Ga0268266_10120805
165 Ga0268266_10509886
166 Ga0307413_10001603
167 Ga0307413_10073873
168 Ga0307413_10214086
169 Ga0307410_10389034
170 Ga0307406_10117471
171 Ga0307406_10316117
172 Ga0307409_100190497
173 Ga0307416_100231086
174 Ga0307415_100135568
175 Ga0307415_100183802
176 Ga0395905_0796646
177 Ga0436364_0504722
178 Ga0436364_1030723
179 Ga0400483_182325
180 Ga0436365_1278068
181 Ga0436363_0219355
182 Ga0436363_0563348
183 Ga0436363_0968293
184 Ga0436363_1118985
185 Ga0436362_0837632
186 Ga0439446_0052012
187 Ga0466969_0096664
188 Ga0466972_0039207
189 Ga0466972_0067905
190 Ga0466965_0054170
191 Ga0466961_0287448
192 Ga0466958_0088024
193 Ga0466967_0250720
194 Ga0495641_0049771
195 Ga0495653_0046023
196 Ga0495662_0224761
197 Ga0495608_0003341
198 Ga0495628_0563651
199 Ga0495630_0000007
200 Ga0495640_0192493
201 Ga0495640_0212058
202 Ga0495667_0004617
203 Ga0495635_0079968
204 Ga0495657_0029448
205 Ga0495647_0002362
206 Ga0495624_0000241
207 Ga0495624_0000455
208 Ga0495600_0129749
209 Ga0495604_0171168
210 Ga0495676_0182264
211 Ga0495680_0001665
212 Ga0495675_0169977
213 Ga0495684_0102091
214 Ga0495602_0039316
215 Ga0496102_0143753
216 Ga0496102_0286552
217 Ga0496104_0230363
218 Ga0496105_0058564
219 Ga0496109_0004240
220 Ga0496112_0613212
221 Ga0496113_0041731
222 Ga0496113_0262501
223 Ga0496116_0000680
224 Ga0496117_0013137
225 Ga0496117_0130156
226 Ga0496117_0168295
227 Ga0496118_0002923
228 Ga0496118_0042928
229 Ga0496119_0001947
230 Ga0496119_0299203
231 Ga0496125_0018848
232 Ga0501034_0200155
233 Ga0501047_0184300
234 Ga0501080_0154314
235 nmdc:mga05p37_969823_c1
236 nmdc:mga06r32_467342_c1
237 nmdc:mga08y16_63521_c1
238 nmdc:mga0n895_34274_c1
239 Ga0500635_0000179
240 Ga0495595_0011591
241 Ga0495619_0000021
242 Ga0495619_0096510
243 Ga0501082_0408034
244 2891327064
245 3003003816
246 8053949977

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

26

237

0.87

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

32

280

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
5t5q-assembly1.cif.gz_B crystal structure of short-chain dehydrogenase/reductase sdr:glucose/ribitol dehydrogenase from brucella melitensis 0.9198 7 257
5tii-assembly1.cif.gz_C comprehensive analysis of a novel ketoreductase for pentangular polyphenol biosynthesis 0.9156 3 256
5t5q-assembly1.cif.gz_A crystal structure of short-chain dehydrogenase/reductase sdr:glucose/ribitol dehydrogenase from brucella melitensis 0.9134 7 257
5tii-assembly2.cif.gz_E comprehensive analysis of a novel ketoreductase for pentangular polyphenol biosynthesis 0.9121 2 256
5tii-assembly2.cif.gz_G comprehensive analysis of a novel ketoreductase for pentangular polyphenol biosynthesis 0.9113 2 256
ID Description Score Start End Superfamily
af_A0A1D6ED38_49_231_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9297 7 197 3.40.50.720
5itvD00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9058 5 260 3.40.50.720
4cqmK00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9009 9 259 3.40.50.720
2ehdA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8994 8 252 3.40.50.720
2ztuB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8979 13 260 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A4Y9N587-F1-model_v4 SDR family oxidoreductase 0.9442 9 257
AF-A0A323V8F5-F1-model_v4 3-ketoacyl-ACP reductase 0.9374 11 242 GO:0016614
AF-A0A537ZNN4-F1-model_v4 SDR family oxidoreductase 0.9369 9 259
AF-A0A1H9CCD1-F1-model_v4 3-oxoacyl-[acyl-carrier protein] reductase 0.9323 7 257 GO:0016614
AF-A0A0M8W182-F1-model_v4 3-ketoacyl-ACP reductase 0.9303 3 257 GO:0016614

Map