F119085

General Info

Members Datasets Scaffolds Average Seq Length
123 110 114 178

Family's Representative Sequence

Representative Sequence 3300031903|Ga0307407_10090190|Ga0307407_100901903
Length 201
Sequence VPARYDPRTVEPSARLTLFDTALGPCAIAWSAHGIVALQLPEADRRATRARLRRRLPDALDGDPPADVQRAIEAIVALLEGEPVDLGDVVLDPTGVPDFHRRVYAVARTIAPGTTLTYGEVARRIGEPGAARAVGQALGQNPFAIIVPCHRVLAAEGGIGGFSAGGGRSTKRRMLAIERARLGDGPDLFAQPPAGLPAGAA

Samples

Sample ID Description Type Environment
1 2547132374 Acidovorax radicis N35 Isolate Unclassified
2 2643221570 Acidovorax sp. Root568 Isolate Unclassified
3 2643221609 Acidovorax sp. Root217 Isolate Unclassified
4 2643221611 Acidovorax sp. Root219 Isolate Unclassified
5 2643221652 Acidovorax sp. Root402 Isolate Unclassified
6 2643221717 Acidovorax sp. Root267 Isolate Unclassified
7 2738543012 Acidovorax sp. CF301 Isolate Unclassified
8 2795385472 Herbihabitans rhizosphaerae DSM 101727 Isolate Rhizosphere
9 2816332133 Acidovorax radicis 2721A Isolate Unclassified
10 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
11 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
12 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
13 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
14 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
15 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
16 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
17 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
18 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
19 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
20 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
21 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
22 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
23 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
24 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
25 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
26 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
27 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
28 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
29 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
30 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
31 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
32 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
33 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
34 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
35 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
36 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
37 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
38 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
53 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
54 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
55 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
56 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
57 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
58 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
59 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
60 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
61 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
62 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
63 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
64 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
65 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
66 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
67 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
68 3300042144 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624F_E14_070516_89 Metagenome Rhizosphere
69 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
70 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
71 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
72 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
73 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
74 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
75 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
76 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
77 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
78 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
79 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
80 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
81 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
82 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
83 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
84 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
85 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
86 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
87 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
88 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
89 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
90 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
91 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
92 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
93 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
94 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
95 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
96 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
97 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
98 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
99 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
100 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
101 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
102 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
103 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
104 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
105 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
106 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
107 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
108 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
109 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
110 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.68
Metatranscriptomes 0
Isolates 7.32

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.57
Nodule 0
Rhizoplane 0.81
Rhizosphere 78.05
Stem 0
Stem Tuber 0
Unclassified 10.57

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10083523 3300003316 Bacteria 1482
2 Ga0070690_100012450 3300005330 Bacteria 5004
3 Ga0068868_100018824 3300005338 Bacteria 5167
4 Ga0070673_100035803 3300005364 Bacteria 3767
5 Ga0070711_100165602 3300005439 Unclassified 1680
6 Ga0070705_100815699 3300005440 Bacteria 743
7 Ga0068867_100010748 3300005459 Bacteria 6455
8 Ga0068853_100454385 3300005539 Bacteria 1205
9 Ga0068855_100230151 3300005563 Bacteria 2076
10 Ga0068856_100045296 3300005614 Bacteria 4331
11 Ga0068852_100249743 3300005616 Bacteria 1699
12 Ga0070717_10005886 3300006028 Bacteria 8978
13 Ga0070717_10022378 3300006028 Bacteria 4994
14 Ga0075365_10446378 3300006038 Bacteria 913
15 Ga0075368_10379417 3300006042 Bacteria 618
16 Ga0075363_100287246 3300006048 Bacteria 953
17 Ga0075364_10402125 3300006051 Bacteria 934
18 Ga0075432_10032259 3300006058 Bacteria 1815
19 Ga0070716_100013672 3300006173 Bacteria 4142
20 Ga0070716_100106700 3300006173 Bacteria 1728
21 Ga0075362_10020321 3300006177 Bacteria 2774
22 Ga0075367_10039110 3300006178 Bacteria 2764
23 Ga0075370_10092044 3300006353 Bacteria 1750
24 Ga0075428_100014092 3300006844 Bacteria 8894
25 Ga0075429_101425795 3300006880 Bacteria 603
26 Ga0105242_10042594 3300009176 Bacteria 3667
27 Ga0105246_10557836 3300011119 Bacteria 983
28 Ga0157380_10008708 3300014326 Bacteria 7251
29 Ga0157376_10012516 3300014969 Bacteria 6298
30 Ga0213872_10146216 3300021361 Bacteria 1035
31 Ga0207642_10351733 3300025899 Bacteria 869
32 Ga0207699_10000035 3300025906 Bacteria 129523
33 Ga0207699_10006143 3300025906 Bacteria 5792
34 Ga0207654_10141838 3300025911 Bacteria 1533
35 Ga0207649_10126580 3300025920 Bacteria 1730
36 Ga0207687_11188076 3300025927 Bacteria 655
37 Ga0207700_10000769 3300025928 Bacteria 18532
38 Ga0207686_10044034 3300025934 Bacteria 2738
39 Ga0207665_10043510 3300025939 Bacteria 3003
40 Ga0207665_10511850 3300025939 Unclassified 928
41 Ga0207689_10217449 3300025942 Bacteria 1579
42 Ga0207689_10440616 3300025942 Bacteria 1088
43 Ga0207651_10790911 3300025960 Unclassified 840
44 Ga0207677_10008329 3300026023 Bacteria 5784
45 Ga0207675_100059343 3300026118 Bacteria 3570
46 Ga0207683_10204123 3300026121 Bacteria 1797
47 Ga0207698_10006378 3300026142 Bacteria 7353
48 Ga0207428_10376664 3300027907 Bacteria 1042
49 Ga0265338_10161059 3300028800 Bacteria 1733
50 Ga0265327_10103320 3300031251 Bacteria 1372
51 Ga0307514_10137807 3300031649 Bacteria 1666
52 Ga0307514_10183163 3300031649 Bacteria 1347
53 Ga0265314_10200481 3300031711 Bacteria 1180
54 Ga0307406_10037233 3300031901 Bacteria 3003
55 Ga0307407_10090190 3300031903 Bacteria 1877
56 Ga0307412_10006831 3300031911 Bacteria 6476
57 Ga0307412_10730675 3300031911 Bacteria 853
58 Ga0307411_10115239 3300032005 Bacteria 1933
59 Ga0395905_0018157 3300037471 Bacteria 6675
60 Ga0400489_85053 3300039093 Unclassified 1435
61 Ga0436360_0361967 3300039438 Bacteria 3180
62 Ga0436360_0567538 3300039438 Bacteria 722
63 Ga0436361_0604575 3300039447 Bacteria 1704
64 Ga0436363_1122874 3300039450 Bacteria 1921
65 Ga0436362_0321721 3300039453 Bacteria 1188
66 Ga0436362_0773706 3300039453 Bacteria 2958
67 Ga0439433_0047585 3300041999 Bacteria 1007
68 Ga0450889_003417 3300042144 Bacteria 1566
69 Ga0439446_0067772 3300042156 Bacteria 1087
70 Ga0451577_0134953 3300042876 Bacteria 2216
71 Ga0451577_0971023 3300042876 Bacteria 764
72 Ga0466972_0002903 3300044658 Bacteria 8485
73 Ga0495629_0509029 3300046459 Bacteria 811
74 Ga0495580_0104169 3300046472 Bacteria 1972
75 Ga0495608_0003346 3300046511 Bacteria 11460
76 Ga0495628_0036825 3300046516 Bacteria 3924
77 Ga0495630_0001775 3300046517 Bacteria 15092
78 Ga0495652_0582605 3300046529 Bacteria 765
79 Ga0495586_0537710 3300046535 Bacteria 675
80 Ga0495587_0151598 3300046536 Bacteria 1321
81 Ga0495645_0042143 3300046543 Bacteria 3328
82 Ga0495667_0139506 3300046559 Bacteria 1562
83 Ga0495635_0112765 3300046663 Bacteria 1857
84 Ga0495658_0049873 3300046683 Bacteria 2366
85 Ga0495669_0001154 3300046684 Bacteria 10973
86 Ga0495600_0241655 3300046809 Bacteria 1150
87 Ga0495604_0088911 3300047317 Bacteria 2297
88 Ga0495674_0050386 3300047319 Bacteria 3674
89 Ga0495672_0033885 3300047320 Bacteria 3161
90 Ga0495680_0055663 3300047322 Bacteria 3067
91 Ga0495675_0215021 3300047444 Bacteria 1165
92 Ga0495684_0011054 3300047471 Bacteria 6979
93 Ga0495602_0650034 3300048088 Bacteria 720
94 Ga0496108_0239880 3300048911 Bacteria 1577
95 Ga0501034_0000592 3300049571 Bacteria 57290
96 Ga0501034_0102309 3300049571 Bacteria 2858
97 Ga0501036_0122190 3300049572 Bacteria 2199
98 Ga0501038_0208515 3300049574 Bacteria 1565
99 Ga0501047_0238673 3300049581 Bacteria 1669
100 Ga0501249_168629 3300049679 Bacteria 560
101 Ga0501083_0005238 3300049744 Bacteria 9170
102 Ga0501044_0643508 3300049823 Bacteria 950
103 nmdc:mga03683_199542_c1 3300050489 Bacteria 918
104 nmdc:mga00v17_368486_c1 3300050491 Bacteria 934
105 nmdc:mga0k408_47785_c2 3300050493 Bacteria 2059
106 nmdc:mga0k408_82545_c1 3300050493 Bacteria 1883
107 nmdc:mga06z11_342038_c1 3300050494 Bacteria 895
108 nmdc:mga04h51_132469_c1 3300050495 Bacteria 939
109 Ga0495601_0028012 3300053077 Bacteria 3487
110 Ga0495601_0115702 3300053077 Unclassified 1739
111 Ga0495595_0020574 3300053084 Bacteria 2873
112 Ga0495619_0002562 3300053085 Bacteria 11892
113 Ga0501084_0023775 3300054114 Bacteria 5110
114 Ga0501082_0124876 3300060353 Bacteria 2232

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025942 Ga0207689_10440616 Ga0207689_104406161 149
2 3300006173 Ga0070716_100013672 Ga0070716_1000136724 155
3 3300049679 Ga0501249_168629 Ga0501249_168629_13_492 155
4 3300049572 Ga0501036_0122190 Ga0501036_0122190_11_496 156
5 3300028800 Ga0265338_10161059 Ga0265338_101610592 161
6 3300031901 Ga0307406_10037233 Ga0307406_100372333 168
7 3300025939 Ga0207665_10511850 Ga0207665_105118502 170
8 3300039093 Ga0400489_85053 Ga0400489_85053_634_1146 170
9 3300031251 Ga0265327_10103320 Ga0265327_101033202 171
10 3300039438 Ga0436360_0567538 Ga0436360_0567538_47_562 171
11 3300039450 Ga0436363_1122874 Ga0436363_1122874_680_1195 171
12 3300039453 Ga0436362_0321721 Ga0436362_0321721_627_1142 171
13 3300049571 Ga0501034_0000592 Ga0501034_0000592_39562_40092 171
14 3300049574 Ga0501038_0208515 Ga0501038_0208515_409_939 171
15 3300011119 Ga0105246_10557836 Ga0105246_105578362 172
16 3300042156 Ga0439446_0067772 Ga0439446_0067772_35_553 172
17 3300048911 Ga0496108_0239880 Ga0496108_0239880_117_647 172
18 3300049823 Ga0501044_0643508 Ga0501044_0643508_86_604 172
19 iso_pu_bacteria 2795385472 2795797031 172
20 3300005439 Ga0070711_100165602 Ga0070711_1001656022 173
21 3300006028 Ga0070717_10005886 Ga0070717_100058865 173
22 3300006173 Ga0070716_100106700 Ga0070716_1001067001 173
23 3300025906 Ga0207699_10006143 Ga0207699_100061434 173
24 3300025927 Ga0207687_11188076 Ga0207687_111880761 173
25 3300046459 Ga0495629_0509029 Ga0495629_0509029_140_661 173
26 3300046472 Ga0495580_0104169 Ga0495580_0104169_82_603 173
27 3300046511 Ga0495608_0003346 Ga0495608_0003346_6604_7125 173
28 3300046516 Ga0495628_0036825 Ga0495628_0036825_2148_2669 173
29 3300046517 Ga0495630_0001775 Ga0495630_0001775_2888_3409 173
30 3300046529 Ga0495652_0582605 Ga0495652_0582605_58_579 173
31 3300046535 Ga0495586_0537710 Ga0495586_0537710_75_596 173
32 3300046536 Ga0495587_0151598 Ga0495587_0151598_694_1215 173
33 3300046543 Ga0495645_0042143 Ga0495645_0042143_2773_3294 173
34 3300046559 Ga0495667_0139506 Ga0495667_0139506_715_1236 173
35 3300046663 Ga0495635_0112765 Ga0495635_0112765_779_1300 173
36 3300046683 Ga0495658_0049873 Ga0495658_0049873_158_679 173
37 3300046684 Ga0495669_0001154 Ga0495669_0001154_5999_6520 173
38 3300046809 Ga0495600_0241655 Ga0495600_0241655_612_1133 173
39 3300047317 Ga0495604_0088911 Ga0495604_0088911_11_532 173
40 3300047319 Ga0495674_0050386 Ga0495674_0050386_28_549 173
41 3300047322 Ga0495680_0055663 Ga0495680_0055663_58_579 173
42 3300047444 Ga0495675_0215021 Ga0495675_0215021_58_579 173
43 3300047471 Ga0495684_0011054 Ga0495684_0011054_407_928 173
44 3300048088 Ga0495602_0650034 Ga0495602_0650034_82_603 173
45 3300053077 Ga0495601_0028012 Ga0495601_0028012_1801_2322 173
46 3300053077 Ga0495601_0115702 Ga0495601_0115702_590_1111 173
47 3300053084 Ga0495595_0020574 Ga0495595_0020574_2285_2806 173
48 3300053085 Ga0495619_0002562 Ga0495619_0002562_4094_4615 173
49 3300031649 Ga0307514_10137807 Ga0307514_101378073 174
50 3300031649 Ga0307514_10183163 Ga0307514_101831632 174
51 3300006028 Ga0070717_10022378 Ga0070717_100223784 175
52 3300021361 Ga0213872_10146216 Ga0213872_101462162 175
53 3300039438 Ga0436360_0361967 Ga0436360_0361967_1947_2474 175
54 3300039447 Ga0436361_0604575 Ga0436361_0604575_459_986 175
55 3300039453 Ga0436362_0773706 Ga0436362_0773706_617_1144 175
56 iso_pu_bacteria 2643221609 2644062711 175
57 iso_pu_bacteria 2643221611 2644076275 175
58 3300005330 Ga0070690_100012450 Ga0070690_1000124502 176
59 3300005364 Ga0070673_100035803 Ga0070673_1000358033 176
60 3300005459 Ga0068867_100010748 Ga0068867_1000107485 176
61 3300006880 Ga0075429_101425795 Ga0075429_1014257951 176
62 3300009176 Ga0105242_10042594 Ga0105242_100425944 176
63 3300014326 Ga0157380_10008708 Ga0157380_100087087 176
64 3300025899 Ga0207642_10351733 Ga0207642_103517332 176
65 3300025934 Ga0207686_10044034 Ga0207686_100440344 176
66 3300025960 Ga0207651_10790911 Ga0207651_107909111 176
67 3300026118 Ga0207675_100059343 Ga0207675_1000593433 176
68 3300026121 Ga0207683_10204123 Ga0207683_102041233 176
69 3300031711 Ga0265314_10200481 Ga0265314_102004812 178
70 3300049744 Ga0501083_0005238 Ga0501083_0005238_1657_2196 178
71 3300050493 nmdc:mga0k408_82545_c1 nmdc:mga0k408_82545_c1_1193_1747 178
72 3300054114 Ga0501084_0023775 Ga0501084_0023775_3859_4398 178
73 3300060353 Ga0501082_0124876 Ga0501082_0124876_373_912 178
74 3300025920 Ga0207649_10126580 Ga0207649_101265801 179
75 3300042876 Ga0451577_0971023 Ga0451577_0971023_61_609 179
76 3300044658 Ga0466972_0002903 Ga0466972_0002903_1015_1563 179
77 3300049571 Ga0501034_0102309 Ga0501034_0102309_2093_2632 179
78 3300005539 Ga0068853_100454385 Ga0068853_1004543852 180
79 3300006038 Ga0075365_10446378 Ga0075365_104463782 180
80 3300006042 Ga0075368_10379417 Ga0075368_103794171 180
81 3300006048 Ga0075363_100287246 Ga0075363_1002872462 180
82 3300006058 Ga0075432_10032259 Ga0075432_100322592 180
83 3300006178 Ga0075367_10039110 Ga0075367_100391104 180
84 3300006353 Ga0075370_10092044 Ga0075370_100920442 180
85 3300006844 Ga0075428_100014092 Ga0075428_1000140926 180
86 3300025906 Ga0207699_10000035 Ga0207699_1000003564 180
87 3300025928 Ga0207700_10000769 Ga0207700_100007693 180
88 3300025939 Ga0207665_10043510 Ga0207665_100435103 180
89 3300027907 Ga0207428_10376664 Ga0207428_103766641 180
90 3300031911 Ga0307412_10006831 Ga0307412_100068315 180
91 3300042144 Ga0450889_003417 Ga0450889_003417_909_1457 180
92 3300047320 Ga0495672_0033885 Ga0495672_0033885_2091_2636 180
93 3300049581 Ga0501047_0238673 Ga0501047_0238673_762_1307 180
94 3300050493 nmdc:mga0k408_47785_c2 nmdc:mga0k408_47785_c2_1362_1916 180
95 3300050494 nmdc:mga06z11_342038_c1 nmdc:mga06z11_342038_c1_95_649 180
96 3300050495 nmdc:mga04h51_132469_c1 nmdc:mga04h51_132469_c1_45_599 180
97 3300005338 Ga0068868_100018824 Ga0068868_1000188242 181
98 3300005440 Ga0070705_100815699 Ga0070705_1008156991 181
99 3300005563 Ga0068855_100230151 Ga0068855_1002301511 181
100 3300005614 Ga0068856_100045296 Ga0068856_1000452962 181
101 3300006051 Ga0075364_10402125 Ga0075364_104021252 181
102 3300006177 Ga0075362_10020321 Ga0075362_100203212 181
103 3300014969 Ga0157376_10012516 Ga0157376_100125166 181
104 3300025911 Ga0207654_10141838 Ga0207654_101418382 181
105 3300025942 Ga0207689_10217449 Ga0207689_102174492 181
106 3300026023 Ga0207677_10008329 Ga0207677_100083293 181
107 3300031903 Ga0307407_10090190 Ga0307407_100901903 181
108 3300031911 Ga0307412_10730675 Ga0307412_107306752 181
109 3300032005 Ga0307411_10115239 Ga0307411_101152392 181
110 3300041999 Ga0439433_0047585 Ga0439433_0047585_23_568 181
111 3300042876 Ga0451577_0134953 Ga0451577_0134953_708_1253 181
112 3300050489 nmdc:mga03683_199542_c1 nmdc:mga03683_199542_c1_190_735 181
113 3300050491 nmdc:mga00v17_368486_c1 nmdc:mga00v17_368486_c1_30_575 181
114 iso_pu_bacteria 2547132374 2548500983 181
115 iso_pu_bacteria 2643221570 2643866692 181
116 iso_pu_bacteria 2643221652 2644294563 181
117 iso_pu_bacteria 2643221717 2644645868 181
118 iso_pu_bacteria 2738543012 2739244609 181
119 iso_pu_bacteria 2816332133 2816475187 181
120 3300005616 Ga0068852_100249743 Ga0068852_1002497432 182
121 3300026142 Ga0207698_10006378 Ga0207698_100063782 182
122 3300003316 rootH1_10083523 rootH1_100835232 183
123 3300037471 Ga0395905_0018157 Ga0395905_0018157_6072_6623 183

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01035

DNA_binding_1

6-O-methylguanine DNA methyltransferase, DNA binding domain

98

180

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
4zyd-assembly2.cif.gz_A-3 crystal structure of sulfolobus solfataricus o6-methylguanine methyltransferase in complex with modified dna 0.8876 5 172
7dqt-assembly1.cif.gz_A crystal structure of o6-methylguanine methyltransferase y91f variant 0.8819 6 170
4enn-assembly1.cif.gz_A crystal structure of s. pombe atl1 in complex with damaged dna containing o6-carboxymethylguanine 0.8791 89 173
7dqr-assembly1.cif.gz_A crystal structure of sulfurisphaera tokodaii methylated o6-methylguanine methyltransferase 0.8761 6 173
5llq-assembly2.cif.gz_B crystal structure of sulfolobus solfataricus o6-methylguanine methyltransferase c119f variant 0.8756 7 172
ID Description Score Start End Superfamily
af_Q4DAC5_49_134_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9538 88 172 1.10.10.10
5llqB02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9238 88 172 1.10.10.10
af_P26188_97_181_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9182 88 170 1.10.10.10
af_Q5A0Y8_92_172_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9169 88 170 1.10.10.10
af_Q4DAC5_49_134_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9114 88 172 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A7Y4ZKF0-F1-model_v4 DNA-3-methyladenine glycosylase II (EC 3.2.2.21) 0.9655 2 169 GO:0003908
GO:0005737
GO:0006285
GO:0006307
GO:0008725
GO:0032131
GO:0032259
GO:0032993
GO:0043916
AF-A0A534RXA4-F1-model_v4 Methylated-DNA--[protein]-cysteine S-methyltransferase (EC 2.1.1.63) 0.964 2 176 GO:0003908
GO:0006284
GO:0032259
AF-A0A7Y4WUW0-F1-model_v4 DNA-3-methyladenine glycosylase II (EC 3.2.2.21) 0.9606 21 171 GO:0003908
GO:0005737
GO:0006285
GO:0006307
GO:0008725
GO:0032131
GO:0032259
GO:0032993
GO:0043916
AF-A0A2N8KTT6-F1-model_v4 Cysteine methyltransferase 0.9604 6 169 GO:0003908
GO:0006281
GO:0032259
AF-A0A7G9YMG3-F1-model_v4 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) 0.9604 60 169 GO:0003908
GO:0006281
GO:0032259

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pLDDT pTM Quality
87.66 0.83 High
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Predicted Structure (AlphaFold2)

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