F112144

General Info

Members Datasets Scaffolds Average Seq Length
121 99 242 293

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2643221572|2643874845
Length 317
Sequence IVILPQHDWPEAVRYWRGAEELGFDHAWTYDHLSWRGLAGERWHATVPTLTAAAMVTERIRLGTFVASPNFRHPVPFAKDIATVDQISAGRVILGLGSGGTGFDAFVLGQAGLLPRERYERFAEFTEALDTLLRFEPLTPAVADAPIDGSMPADDVIDPAVAEPGTAGISFSGGWYTAVDARMVGGPAQEPRMPFLVAADGPRALRLAARFGQGWVTTGGDADTIELWWGRLRELSDRLAVACEEEGRDPASIDRSLLFDSQTKFALESVDAFEDAVGRASELGFTDFMTHWPRENGLYAGSEAVLEEVASRLDRWR

Samples

Sample ID Description Type Environment
1 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
2 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
3 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
4 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
5 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
6 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
7 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
8 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
9 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
10 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
11 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
12 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
13 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
14 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
15 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
16 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
17 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
18 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
19 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
20 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
21 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
22 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
23 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
24 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
25 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
26 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
38 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
39 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
40 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
41 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
42 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
43 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
44 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
45 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
46 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
47 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
48 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
49 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
50 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
51 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
52 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
53 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
54 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
55 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
56 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
57 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
58 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
59 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
60 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
61 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
62 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
63 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
64 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
65 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
66 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
67 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
68 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
69 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
70 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
71 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
72 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
73 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
74 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
75 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
76 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
77 2643221572 Leifsonia sp. Root60 Isolate Unclassified
78 2585428094 Herbiconiux sp. YR403 Isolate Rhizosphere
79 2643221549 Agromyces sp. Root1464 Isolate Unclassified
80 2643221619 Agromyces sp. Root81 Isolate Unclassified
81 2643221649 Leifsonia sp. Root4 Isolate Unclassified
82 2643221669 Leifsonia sp. Root1293 Isolate Unclassified
83 2675903058 Actinopolymorpha cephalotaxi CPCC 202808 Isolate Rhizosphere
84 2721755702 Agromyces sp. AR33 Isolate Rhizosphere
85 2751185734 Saccharothrix sp. NRRL B-16314 Isolate Rhizosphere
86 2808606372 Agromyces sp. 23-23 Isolate Unclassified
87 2808606447 Microbacterium sp. HAR-UPW-R2A-48 Isolate Unclassified
88 2827628540 Actinopolymorpha cephalotaxi DSM 45117 Isolate Rhizosphere
89 2833709550 Microbacterium sp. 3290 Isolate Rhizosphere
90 2842888712 Tsukamurella sp. R-71941 Isolate Unclassified
91 2852632344 Microbacterium sp. AK009 Isolate Rhizosphere
92 2870622029 Conyzicola lurida DSM 105784 Isolate Unclassified
93 2884994152 Cellulomonas sp. H30R-01 Isolate Rhizosphere
94 2895660088 Leifsonia flava SYP-B2174 Isolate Rhizosphere
95 2919443155 Agromyces sp. 3263 Isolate Rhizosphere
96 2935409751 Agromyces sp. PvR057 Isolate Rhizosphere
97 2939657138 Conyzicola nivalis 2857 Isolate Rhizosphere
98 2966921586 Rathayibacter agropyri 617 Isolate Rhizosphere
99 8057345674 Herbiconiux aconitum CPCC 205763 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 80.99
Metatranscriptomes 0
Isolates 19.01

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 15.7
Nodule 0
Rhizoplane 4.13
Rhizosphere 66.12
Stem 0
Stem Tuber 0
Unclassified 1.65

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065714_10095977 3300005288 Bacteria 1772
2 Ga0070680_100000753 3300005336 Bacteria 22595
3 Ga0070705_100014489 3300005440 Bacteria 4058
4 Ga0070678_100069474 3300005456 Bacteria 2630
5 Ga0070681_10000154 3300005458 Bacteria 52563
6 Ga0070707_100157402 3300005468 Unclassified 2213
7 Ga0070679_100000006 3300005530 Bacteria 203959
8 Ga0070665_100001996 3300005548 Bacteria 22948
9 Ga0070702_100051819 3300005615 Bacteria 2351
10 Ga0068861_100024133 3300005719 Bacteria 4394
11 Ga0081455_10249064 3300005937 Bacteria 1300
12 Ga0075365_10075631 3300006038 Bacteria 2273
13 Ga0075363_100053427 3300006048 Bacteria 2159
14 Ga0075370_10033488 3300006353 Bacteria 2877
15 Ga0075428_100064260 3300006844 Bacteria 4019
16 Ga0075428_100523279 3300006844 Bacteria 1268
17 Ga0075430_100083975 3300006846 Bacteria 2668
18 Ga0075431_100142650 3300006847 Bacteria 2469
19 Ga0075431_100174143 3300006847 Bacteria 2211
20 Ga0075429_100116742 3300006880 Bacteria 2333
21 Ga0075429_100141837 3300006880 Bacteria 2103
22 Ga0075429_100154757 3300006880 Bacteria 2007
23 Ga0111539_10006186 3300009094 Bacteria 15443
24 Ga0111539_10141135 3300009094 Bacteria 2820
25 Ga0114129_10011126 3300009147 Bacteria 12824
26 Ga0114129_10331673 3300009147 Bacteria 2020
27 Ga0105243_10121492 3300009148 Bacteria 2203
28 Ga0157370_10097786 3300013104 Bacteria 2753
29 Ga0157369_10002314 3300013105 Bacteria 22932
30 Ga0157369_10100739 3300013105 Bacteria 3079
31 Ga0157375_10327374 3300013308 Bacteria 1697
32 Ga0157380_10022033 3300014326 Bacteria 4787
33 Ga0207688_10122677 3300025901 Bacteria 1517
34 Ga0207707_10000552 3300025912 Bacteria 37949
35 Ga0207660_10000174 3300025917 Bacteria 41019
36 Ga0207652_10000012 3300025921 Bacteria 235382
37 Ga0207646_10170162 3300025922 Unclassified 1967
38 Ga0207659_10241042 3300025926 Bacteria 1463
39 Ga0207709_10108884 3300025935 Bacteria 1848
40 Ga0207691_10329821 3300025940 Bacteria 1308
41 Ga0207675_100022821 3300026118 Bacteria 5823
42 Ga0207683_10214077 3300026121 Bacteria 1754
43 Ga0268266_10003133 3300028379 Bacteria 16813
44 Ga0307413_10165791 3300031824 Bacteria 1558
45 Ga0307409_100173030 3300031995 Bacteria 1903
46 Ga0307409_100476771 3300031995 Bacteria 1210
47 Ga0307416_100135892 3300032002 Bacteria 2224
48 Ga0307416_100772473 3300032002 Bacteria 1055
49 Ga0451793_1395602 3300041452 Bacteria 1662
50 Ga0439457_007847 3300042014 Bacteria 2542
51 Ga0450894_000100 3300042131 Bacteria 14320
52 Ga0450898_000023 3300042134 Bacteria 12441
53 Ga0450906_000360 3300042145 Bacteria 9241
54 Ga0450908_006443 3300042184 Bacteria 2228
55 Ga0466965_0005757 3300044683 Bacteria 5594
56 Ga0495686_0108670 3300047472 Bacteria 1666
57 Ga0496102_0264281 3300048905 Bacteria 1622
58 Ga0496111_0018082 3300048914 Bacteria 4877
59 Ga0496111_0194346 3300048914 Bacteria 1508
60 Ga0496114_0175423 3300048917 Bacteria 1870
61 Ga0496117_0000321 3300048920 Bacteria 84088
62 Ga0496118_0119599 3300048921 Bacteria 1722
63 Ga0496122_0000744 3300048925 Bacteria 63598
64 Ga0496122_0011817 3300048925 Bacteria 8780
65 Ga0496123_0054673 3300048926 Bacteria 2626
66 Ga0496123_0105057 3300048926 Bacteria 1631
67 Ga0496124_0053964 3300048927 Bacteria 3404
68 Ga0496126_0001085 3300048929 Bacteria 45752
69 Ga0501031_0075094 3300049568 Bacteria 2201
70 Ga0501032_0301003 3300049569 Bacteria 1037
71 Ga0501048_0437712 3300049582 Bacteria 936
72 Ga0501070_0017090 3300049586 Bacteria 6088
73 Ga0501071_0004861 3300049587 Bacteria 8565
74 Ga0501072_0151232 3300049588 Bacteria 1851
75 nmdc:mga00v17_118110_c1 3300050491 Bacteria 1687
76 nmdc:mga07m45_121763_c1 3300050496 Bacteria 1507
77 nmdc:mga05p37_268398_c1 3300050507 Bacteria 2040
78 nmdc:mga09592_143098_c1 3300050508 Bacteria 2062
79 nmdc:mga09592_59750_c1 3300050508 Bacteria 3222
80 nmdc:mga06r32_199153_c1 3300050510 Bacteria 1991
81 nmdc:mga06r32_462701_c1 3300050510 Bacteria 1247
82 nmdc:mga08y16_103748_c1 3300050511 Bacteria 2960
83 Ga0500559_0000736 3300053136 Bacteria 21465
84 Ga0500559_0000813 3300053136 Bacteria 20321
85 Ga0500559_0015180 3300053136 Bacteria 3254
86 Ga0500568_0001118 3300053139 Bacteria 18011
87 Ga0500573_0000052 3300053140 Bacteria 94687
88 Ga0500573_0009250 3300053140 Bacteria 5459
89 Ga0500573_0011030 3300053140 Bacteria 5054
90 Ga0500573_0054853 3300053140 Bacteria 2288
91 Ga0500573_0099875 3300053140 Bacteria 1634
92 Ga0500573_0138753 3300053140 Bacteria 1340
93 Ga0500573_0173786 3300053140 Bacteria 1163
94 Ga0500577_0001561 3300053142 Bacteria 5850
95 Ga0500616_0000218 3300053153 Bacteria 90063
96 Ga0500645_003994 3300053730 Bacteria 5804
97 Ga0501084_0254401 3300054114 Bacteria 1483
98 Ga0530510_0046920 3300061734 Bacteria 3121
99 2643874845 2643221572 Bacteria 3614809
100 2587864467 2585428094 Bacteria 3604039
101 2643769392 2643221549 Bacteria 4042819
102 2644114009 2643221619 Bacteria 4158469
103 2644280432 2643221649 Bacteria 3867359
104 2644381901 2643221669 Bacteria 3611286
105 2676473744 2675903058 Bacteria 6822861
106 2723642684 2721755702 Bacteria 4373124
107 2753073014 2751185734 Bacteria 8863695
108 2808902654 2808606372 Bacteria 4649509
109 2809226580 2808606447 Bacteria 3572005
110 2827632373 2827628540 Bacteria 6858585
111 2833712188 2833709550 Bacteria 4008291
112 2842892375 2842888712 Bacteria 4279094
113 2852632809 2852632344 Bacteria 3463163
114 2870622076 2870622029 Bacteria 3643329
115 2884998190 2884994152 Bacteria 4492978
116 2895660933 2895660088 Bacteria 3782833
117 2919443254 2919443155 Bacteria 4072969
118 2935413162 2935409751 Bacteria 4179611
119 2939658426 2939657138 Bacteria 3740283
120 2966922683 2966921586 Bacteria 3092803
121 8057347793 8057345674 Bacteria 4160394
122 Ga0065714_10095977
123 Ga0070680_100000753
124 Ga0070705_100014489
125 Ga0070678_100069474
126 Ga0070681_10000154
127 Ga0070707_100157402
128 Ga0070679_100000006
129 Ga0070665_100001996
130 Ga0070702_100051819
131 Ga0068861_100024133
132 Ga0081455_10249064
133 Ga0075365_10075631
134 Ga0075363_100053427
135 Ga0075370_10033488
136 Ga0075428_100064260
137 Ga0075428_100523279
138 Ga0075430_100083975
139 Ga0075431_100142650
140 Ga0075431_100174143
141 Ga0075429_100116742
142 Ga0075429_100141837
143 Ga0075429_100154757
144 Ga0111539_10006186
145 Ga0111539_10141135
146 Ga0114129_10011126
147 Ga0114129_10331673
148 Ga0105243_10121492
149 Ga0157370_10097786
150 Ga0157369_10002314
151 Ga0157369_10100739
152 Ga0157375_10327374
153 Ga0157380_10022033
154 Ga0207688_10122677
155 Ga0207707_10000552
156 Ga0207660_10000174
157 Ga0207652_10000012
158 Ga0207646_10170162
159 Ga0207659_10241042
160 Ga0207709_10108884
161 Ga0207691_10329821
162 Ga0207675_100022821
163 Ga0207683_10214077
164 Ga0268266_10003133
165 Ga0307413_10165791
166 Ga0307409_100173030
167 Ga0307409_100476771
168 Ga0307416_100135892
169 Ga0307416_100772473
170 Ga0451793_1395602
171 Ga0439457_007847
172 Ga0450894_000100
173 Ga0450898_000023
174 Ga0450906_000360
175 Ga0450908_006443
176 Ga0466965_0005757
177 Ga0495686_0108670
178 Ga0496102_0264281
179 Ga0496111_0018082
180 Ga0496111_0194346
181 Ga0496114_0175423
182 Ga0496117_0000321
183 Ga0496118_0119599
184 Ga0496122_0000744
185 Ga0496122_0011817
186 Ga0496123_0054673
187 Ga0496123_0105057
188 Ga0496124_0053964
189 Ga0496126_0001085
190 Ga0501031_0075094
191 Ga0501032_0301003
192 Ga0501048_0437712
193 Ga0501070_0017090
194 Ga0501071_0004861
195 Ga0501072_0151232
196 nmdc:mga00v17_118110_c1
197 nmdc:mga07m45_121763_c1
198 nmdc:mga05p37_268398_c1
199 nmdc:mga09592_143098_c1
200 nmdc:mga09592_59750_c1
201 nmdc:mga06r32_199153_c1
202 nmdc:mga06r32_462701_c1
203 nmdc:mga08y16_103748_c1
204 Ga0500559_0000736
205 Ga0500559_0000813
206 Ga0500559_0015180
207 Ga0500568_0001118
208 Ga0500573_0000052
209 Ga0500573_0009250
210 Ga0500573_0011030
211 Ga0500573_0054853
212 Ga0500573_0099875
213 Ga0500573_0138753
214 Ga0500573_0173786
215 Ga0500577_0001561
216 Ga0500616_0000218
217 Ga0500645_003994
218 Ga0501084_0254401
219 Ga0530510_0046920
220 2643874845
221 2587864467
222 2643769392
223 2644114009
224 2644280432
225 2644381901
226 2676473744
227 2723642684
228 2753073014
229 2808902654
230 2809226580
231 2827632373
232 2833712188
233 2842892375
234 2852632809
235 2870622076
236 2884998190
237 2895660933
238 2919443254
239 2935413162
240 2939658426
241 2966922683
242 8057347793

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00296

Bac_luciferase

Luciferase-like monooxygenase

3

262

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
1rhc-assembly1.cif.gz_A-2 f420-dependent secondary alcohol dehydrogenase in complex with an f420-acetone adduct 0.8311 2 269
5lxe-assembly1.cif.gz_A f420-dependent glucose-6-phosphate dehydrogenase from rhodococcus jostii rha1 0.8062 1 277
3c8n-assembly2.cif.gz_D crystal structure of apo-fgd1 from mycobacterium tuberculosis 0.7999 1 274
3c8n-assembly1.cif.gz_A crystal structure of apo-fgd1 from mycobacterium tuberculosis 0.7949 1 285
7e36-assembly1.cif.gz_B a [6+4]-cycloaddition adduct is the biosynthetic intermediate in streptoseomycin biosynthesis 0.7923 1 237
ID Description Score Start End Superfamily
af_P71701_5_258_3.20.20.30 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.89 2 287 3.20.20.30
af_P71701_5_258_3.20.20.30 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.8602 2 287 3.20.20.30
af_P95159_1_299_3.20.20.30 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.8374 1 269 3.20.20.30
1rhcA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.8311 2 269 3.20.20.30
af_P9WM03_11_339_3.20.20.30 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.8228 6 237 3.20.20.30
ID Description Score Start End GO Terms
AF-A0A7J5CC13-F1-model_v4 LLM class flavin-dependent oxidoreductase 0.9833 1 291 GO:0008726
GO:0016020
GO:0022857
GO:0046306
AF-A0A419I3F7-F1-model_v4 LLM class flavin-dependent oxidoreductase 0.9538 2 289 GO:0008726
GO:0046306
AF-A0A421B1F5-F1-model_v4 Alkanesulfonate monooxygenase SsuD/methylene tetrahydromethanopterin reductase-like flavin-dependent oxidoreductase (Luciferase family) 0.9494 1 290 GO:0008726
GO:0046306
AF-A0A838G6K7-F1-model_v4 TIGR03560 family F420-dependent LLM class oxidoreductase 0.9368 2 289 GO:0008726
GO:0046306
AF-A0A421B1F5-F1-model_v4 Alkanesulfonate monooxygenase SsuD/methylene tetrahydromethanopterin reductase-like flavin-dependent oxidoreductase (Luciferase family) 0.9367 1 290 GO:0008726
GO:0046306

Map