F112065

General Info

Members Datasets Scaffolds Average Seq Length
121 68 109 441

Family's Representative Sequence

Representative Sequence 3300053156|Ga0500622_0007183|Ga0500622_0007183_962_2377
Length 471
Sequence LDIACIVTGLWSNFIDQAQKEIIKMLFTTDKQTLEDLNIFGKHGGNSIYNIFNRCTTRGGAAALEEMFRYPLSDDNAINRRSGIIQYFAGTGAGFPFQSVQFDTAEPYLSNTDERTRLSADAPSITKKLGQMIAADADTEAIYKGITALVELLKGMRGFMASLGGVTAGHAYEADKQAIAALLEEPAFALVWNYDGKGKLPHGVMAEYDALFRFRHRDLVRKLLRYIYALDVYMSVAGVAAAQKFVFPVALPKEQQTVRLEGVYHPQVKGAVPNSIHITPEGNVLFLTGANMAGKSTFMKSVSIALFLAHMGFPVAASKMEFAVFDGIYTTINLPDNLGMGASHFYAEVLRVKKMAHELSQSKRLFILFDELFRGTNVKDAYEATIAITAGFALKKNSLFIISTHIIEAGDVLKERCSNVKFIYLPTRMNGNVPVYTYTLEQGITADRHGMVIINNEGILDILKQGKKKIL

Samples

Sample ID Description Type Environment
1 2738541278 Niastella sp. CF465 Isolate Unclassified
2 2738541283 Pedobacter sp. OK701 Isolate Unclassified
3 2818991444 Filimonas endophytica 3197 Isolate Unclassified
4 2821136567 Chitinophaga sancti 1232 Isolate Unclassified
5 2884791551 Chitinophaga oryzae 1310 Isolate Unclassified
6 2896109856 Chitinophaga sp. SYP-B3965 Isolate Rhizosphere
7 2904467357 Chitinophaga sancti 3198 Isolate Unclassified
8 2929154850 Filimonas sp. R-72421 Hybrid assembly Isolate Unclassified
9 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified
10 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
11 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
12 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
13 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
14 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
15 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
16 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
17 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
18 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
19 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
20 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
21 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
22 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
23 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
24 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
25 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
26 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
27 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
28 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
29 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
30 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
31 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
37 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
38 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
39 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
40 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
41 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
42 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
43 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
44 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
45 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
46 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
47 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
48 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
49 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
50 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
51 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
52 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
53 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
54 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
55 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
56 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
57 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
58 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
59 3300049703 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control Metagenome Rhizosphere
60 3300050005 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought Metagenome Rhizosphere
61 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
62 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
63 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
64 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
65 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
66 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
67 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
68 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 90.91
Metatranscriptomes 0
Isolates 9.09

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 19.83
Nodule 0
Rhizoplane 0.83
Rhizosphere 51.24
Stem 0
Stem Tuber 0
Unclassified 28.1

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10005684 3300003320 Bacteria 48336
2 rootH2_10009233 3300003320 Bacteria 30301
3 rootH2_10049039 3300003320 Bacteria 28476
4 rootH2_10066986 3300003320 Unclassified 2779
5 rootH2_10085396 3300003320 Bacteria 6107
6 rootL2_10025790 3300003322 Bacteria 4959
7 rootL2_10050063 3300003322 Bacteria 3039
8 rootL2_10070416 3300003322 Bacteria 5009
9 rootL2_10211189 3300003322 Bacteria 3630
10 rootH1_10000704 3300003323 Bacteria 41653
11 rootH1_10083756 3300003323 Bacteria 3259
12 rootH1_10183272 3300003323 Unclassified 2795
13 Ga0055531_10000068 3300003794 Bacteria 112187
14 Ga0055531_10000209 3300003794 Bacteria 64439
15 Ga0065165_1005188 3300005262 Bacteria 7513
16 Ga0068853_100000346 3300005539 Bacteria 32311
17 Ga0068853_100150296 3300005539 Bacteria 2096
18 Ga0068856_100019947 3300005614 Bacteria 6507
19 Ga0068856_100027751 3300005614 Bacteria 5522
20 Ga0068860_100000111 3300005843 Bacteria 131004
21 Ga0105240_10000242 3300009093 Bacteria 108001
22 Ga0105240_10000276 3300009093 Bacteria 101817
23 Ga0105240_10335364 3300009093 Bacteria 1719
24 Ga0105241_10029490 3300009174 Bacteria 4095
25 Ga0105237_10011741 3300009545 Bacteria 9266
26 Ga0105237_10017126 3300009545 Bacteria 7516
27 Ga0105237_10173810 3300009545 Bacteria 2154
28 Ga0105238_10004220 3300009551 Bacteria 14269
29 Ga0105238_10016720 3300009551 Bacteria 7433
30 Ga0105239_10010753 3300010375 Bacteria 10223
31 Ga0105239_10214571 3300010375 Bacteria 2157
32 Ga0105239_10285398 3300010375 Bacteria 1859
33 Ga0157370_10002084 3300013104 Bacteria 24477
34 Ga0157370_10036912 3300013104 Bacteria 4740
35 Ga0163162_10000101 3300013306 Bacteria 77114
36 Ga0182008_10000101 3300014497 Bacteria 66205
37 Ga0182008_10000452 3300014497 Bacteria 31325
38 Ga0182008_10001648 3300014497 Bacteria 14754
39 Ga0182006_1000090 3300015261 Bacteria 109855
40 Ga0182006_1000904 3300015261 Bacteria 19844
41 Ga0182006_1013055 3300015261 Bacteria 3616
42 Ga0163161_10001983 3300017792 Bacteria 14849
43 Ga0209436_102747 3300025208 Bacteria 5041
44 Ga0207426_1007612 3300025302 Bacteria 4506
45 Ga0209257_1000001 3300025304 Bacteria 2274655
46 Ga0207654_10020052 3300025911 Bacteria 3538
47 Ga0207695_10000066 3300025913 Bacteria 334103
48 Ga0207695_10000456 3300025913 Bacteria 89131
49 Ga0207695_10119152 3300025913 Bacteria 2610
50 Ga0207671_10001493 3300025914 Bacteria 26998
51 Ga0207671_10005395 3300025914 Bacteria 11791
52 Ga0207694_10099921 3300025924 Bacteria 2298
53 Ga0268264_10000313 3300028381 Bacteria 77820
54 Ga0307517_10002780 3300028786 Bacteria 27837
55 Ga0307511_10000024 3300030521 Bacteria 112616
56 Ga0307511_10000276 3300030521 Bacteria 53817
57 Ga0307513_10162963 3300031456 Bacteria 2119
58 Ga0307513_10177532 3300031456 Bacteria 1998
59 Ga0307513_10222029 3300031456 Bacteria 1710
60 Ga0307510_10005124 3300033180 Bacteria 15574
61 Ga0439431_0001521 3300041997 Bacteria 5123
62 Ga0466972_0020366 3300044658 Bacteria 3316
63 Ga0466959_0040601 3300045049 Bacteria 3437
64 Ga0495638_0033210 3300046460 Bacteria 3301
65 Ga0495638_0039303 3300046460 Bacteria 3004
66 Ga0495648_0036766 3300046524 Bacteria 3153
67 Ga0495633_0000966 3300046558 Bacteria 23583
68 Ga0495668_0000003 3300046616 Bacteria 695023
69 Ga0495611_0000516 3300046648 Bacteria 22957
70 Ga0495611_0008341 3300046648 Bacteria 4387
71 Ga0495611_0058302 3300046648 Bacteria 1751
72 Ga0495625_0090659 3300046660 Bacteria 2114
73 Ga0495672_0007900 3300047320 Bacteria 7934
74 Ga0495687_000001 3300047443 Bacteria 1215582
75 Ga0495687_001082 3300047443 Bacteria 26772
76 Ga0495686_0000039 3300047472 Bacteria 304821
77 Ga0495686_0000066 3300047472 Bacteria 225023
78 Ga0495686_0000128 3300047472 Bacteria 156223
79 Ga0495686_0000195 3300047472 Bacteria 113003
80 Ga0496115_0082920 3300048918 Bacteria 2613
81 Ga0496121_0000026 3300048924 Bacteria 450157
82 Ga0496122_0001520 3300048925 Bacteria 36952
83 Ga0496123_0009400 3300048926 Bacteria 8805
84 Ga0496124_0032304 3300048927 Bacteria 4623
85 Ga0496126_0041619 3300048929 Bacteria 4250
86 Ga0501034_0195097 3300049571 Bacteria 1985
87 Ga0501219_000025 3300049703 Bacteria 23540
88 Ga0501219_000237 3300049703 Bacteria 10513
89 Ga0501219_002276 3300049703 Bacteria 1505
90 Ga0501284_00009 3300050005 Bacteria 142855
91 Ga0501284_00012 3300050005 Bacteria 124103
92 Ga0501284_00020 3300050005 Bacteria 91754
93 Ga0500578_0000042 3300053086 Bacteria 129410
94 Ga0500578_0056209 3300053086 Bacteria 2517
95 Ga0500644_0003924 3300053088 Bacteria 3702
96 Ga0500646_0024121 3300053090 Bacteria 1636
97 Ga0500583_0000228 3300053092 Bacteria 20488
98 Ga0500583_0000675 3300053092 Bacteria 10019
99 Ga0500583_0033415 3300053092 Bacteria 2276
100 Ga0500562_000003 3300053108 Bacteria 293779
101 Ga0500562_000045 3300053108 Bacteria 64905
102 Ga0500642_0059311 3300053130 Bacteria 1713
103 Ga0500616_0021413 3300053153 Bacteria 3626
104 Ga0500622_0000118 3300053156 Bacteria 82672
105 Ga0500622_0000177 3300053156 Bacteria 69046
106 Ga0500622_0001876 3300053156 Bacteria 15870
107 Ga0500622_0006318 3300053156 Bacteria 6916
108 Ga0500622_0007183 3300053156 Bacteria 6348
109 Ga0500622_0007435 3300053156 Bacteria 6221

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049703 Ga0501219_000237 Ga0501219_000237_284_1375 341
2 3300049703 Ga0501219_002276 Ga0501219_002276_331_1494 358
3 3300046648 Ga0495611_0058302 Ga0495611_0058302_577_1734 362
4 3300053090 Ga0500646_0024121 Ga0500646_0024121_358_1548 373
5 3300048918 Ga0496115_0082920 Ga0496115_0082920_261_1598 394
6 3300003323 rootH1_10183272 rootH1_101832722 406
7 3300053156 Ga0500622_0000118 Ga0500622_0000118_15323_16615 407
8 iso_pu_bacteria 2821136567 2821139823 407
9 iso_pu_bacteria 2904467357 2904473425 407
10 iso_pu_bacteria 2738541283 2738756436 409
11 iso_pu_bacteria 2896109856 2896112192 409
12 3300005262 Ga0065165_1005188 Ga0065165_10051883 410
13 3300025208 Ga0209436_102747 Ga0209436_1027472 411
14 3300025302 Ga0207426_1007612 Ga0207426_10076122 411
15 3300028786 Ga0307517_10002780 Ga0307517_1000278020 411
16 3300003320 rootH2_10085396 rootH2_100853964 412
17 3300003320 rootH2_10009233 rootH2_1000923318 413
18 3300013104 Ga0157370_10002084 Ga0157370_100020844 413
19 3300014497 Ga0182008_10000101 Ga0182008_1000010146 413
20 3300015261 Ga0182006_1000090 Ga0182006_100009083 413
21 3300017792 Ga0163161_10001983 Ga0163161_1000198312 413
22 3300048925 Ga0496122_0001520 Ga0496122_0001520_5237_6550 413
23 3300048926 Ga0496123_0009400 Ga0496123_0009400_5911_7224 413
24 3300048924 Ga0496121_0000026 Ga0496121_0000026_118370_119683 414
25 3300005843 Ga0068860_100000111 Ga0068860_10000011171 415
26 3300013306 Ga0163162_10000101 Ga0163162_1000010132 415
27 3300028381 Ga0268264_10000313 Ga0268264_1000031329 415
28 3300046524 Ga0495648_0036766 Ga0495648_0036766_1406_2722 415
29 3300046648 Ga0495611_0008341 Ga0495611_0008341_391_1707 415
30 3300047443 Ga0495687_000001 Ga0495687_000001_418468_419784 415
31 3300053092 Ga0500583_0000675 Ga0500583_0000675_7315_8631 415
32 3300053130 Ga0500642_0059311 Ga0500642_0059311_315_1631 415
33 3300053156 Ga0500622_0001876 Ga0500622_0001876_9933_11249 415
34 3300047472 Ga0495686_0000195 Ga0495686_0000195_107478_108797 416
35 iso_pu_bacteria 2818991444 2819589150 416
36 iso_pu_bacteria 2929154850 2929157683 416
37 3300005614 Ga0068856_100019947 Ga0068856_1000199473 417
38 3300046660 Ga0495625_0090659 Ga0495625_0090659_218_1540 417
39 iso_pu_bacteria 2929154850 2929158700 418
40 iso_pu_bacteria 2929239360 2929241981 418
41 3300003322 rootL2_10025790 rootL2_100257903 419
42 3300003794 Ga0055531_10000068 Ga0055531_1000006887 419
43 3300005539 Ga0068853_100150296 Ga0068853_1001502962 419
44 3300005614 Ga0068856_100027751 Ga0068856_1000277514 419
45 3300009093 Ga0105240_10000276 Ga0105240_1000027667 419
46 3300009174 Ga0105241_10029490 Ga0105241_100294902 419
47 3300009545 Ga0105237_10173810 Ga0105237_101738102 419
48 3300009551 Ga0105238_10004220 Ga0105238_100042204 419
49 3300010375 Ga0105239_10285398 Ga0105239_102853982 419
50 3300025304 Ga0209257_1000001 Ga0209257_1000001539 419
51 3300025911 Ga0207654_10020052 Ga0207654_100200522 419
52 3300025913 Ga0207695_10000456 Ga0207695_1000045617 419
53 3300025914 Ga0207671_10001493 Ga0207671_1000149311 419
54 3300047472 Ga0495686_0000128 Ga0495686_0000128_24829_26157 419
55 3300048929 Ga0496126_0041619 Ga0496126_0041619_1604_2932 419
56 3300053088 Ga0500644_0003924 Ga0500644_0003924_290_1618 419
57 3300053108 Ga0500562_000003 Ga0500562_000003_187190_188518 419
58 3300031456 Ga0307513_10162963 Ga0307513_101629632 420
59 3300031456 Ga0307513_10177532 Ga0307513_101775322 420
60 3300033180 Ga0307510_10005124 Ga0307510_100051243 420
61 3300046460 Ga0495638_0039303 Ga0495638_0039303_1308_2639 420
62 3300053092 Ga0500583_0033415 Ga0500583_0033415_720_2051 420
63 iso_pu_bacteria 2738541278 2738726562 420
64 3300046648 Ga0495611_0000516 Ga0495611_0000516_1365_2699 421
65 3300005539 Ga0068853_100000346 Ga0068853_10000034618 422
66 3300009093 Ga0105240_10000242 Ga0105240_1000024226 422
67 3300009093 Ga0105240_10335364 Ga0105240_103353642 422
68 3300009545 Ga0105237_10017126 Ga0105237_100171262 422
69 3300009551 Ga0105238_10016720 Ga0105238_100167203 422
70 3300010375 Ga0105239_10214571 Ga0105239_102145712 422
71 3300014497 Ga0182008_10001648 Ga0182008_100016486 422
72 3300015261 Ga0182006_1000904 Ga0182006_10009049 422
73 3300025913 Ga0207695_10000066 Ga0207695_10000066248 422
74 3300025913 Ga0207695_10119152 Ga0207695_101191522 422
75 3300025924 Ga0207694_10099921 Ga0207694_100999212 422
76 3300047320 Ga0495672_0007900 Ga0495672_0007900_3353_4690 422
77 3300053086 Ga0500578_0000042 Ga0500578_0000042_23289_24626 422
78 3300053086 Ga0500578_0056209 Ga0500578_0056209_367_1704 422
79 3300053156 Ga0500622_0006318 Ga0500622_0006318_892_2235 422
80 iso_pu_bacteria 2818991444 2819591105 422
81 3300003320 rootH2_10049039 rootH2_100490393 423
82 3300003322 rootL2_10050063 rootL2_100500631 423
83 3300003322 rootL2_10211189 rootL2_102111892 423
84 3300003794 Ga0055531_10000209 Ga0055531_1000020923 423
85 3300025304 Ga0209257_1000001 Ga0209257_100000137 423
86 3300030521 Ga0307511_10000024 Ga0307511_1000002417 423
87 3300041997 Ga0439431_0001521 Ga0439431_0001521_239_1579 423
88 3300044658 Ga0466972_0020366 Ga0466972_0020366_704_2044 423
89 3300045049 Ga0466959_0040601 Ga0466959_0040601_1130_2470 423
90 3300050005 Ga0501284_00012 Ga0501284_00012_94501_95841 423
91 3300053092 Ga0500583_0000228 Ga0500583_0000228_2988_4328 423
92 3300053108 Ga0500562_000045 Ga0500562_000045_8211_9551 423
93 iso_pu_bacteria 2884791551 2884794210 423
94 3300003322 rootL2_10070416 rootL2_100704163 424
95 3300003323 rootH1_10000704 rootH1_1000070417 424
96 3300009545 Ga0105237_10011741 Ga0105237_100117412 424
97 3300010375 Ga0105239_10010753 Ga0105239_100107532 424
98 3300013104 Ga0157370_10036912 Ga0157370_100369123 424
99 3300014497 Ga0182008_10000452 Ga0182008_1000045216 424
100 3300015261 Ga0182006_1013055 Ga0182006_10130552 424
101 3300025914 Ga0207671_10005395 Ga0207671_1000539511 424
102 3300049571 Ga0501034_0195097 Ga0501034_0195097_558_1904 424
103 3300050005 Ga0501284_00020 Ga0501284_00020_66243_67604 424
104 3300053156 Ga0500622_0007183 Ga0500622_0007183_962_2377 424
105 3300003320 rootH2_10066986 rootH2_100669862 425
106 3300047472 Ga0495686_0000039 Ga0495686_0000039_235219_236565 425
107 3300047472 Ga0495686_0000066 Ga0495686_0000066_153880_155226 425
108 3300053153 Ga0500616_0021413 Ga0500616_0021413_1417_2763 425
109 3300030521 Ga0307511_10000276 Ga0307511_100002764 426
110 3300048927 Ga0496124_0032304 Ga0496124_0032304_835_2184 426
111 3300046558 Ga0495633_0000966 Ga0495633_0000966_13548_14900 427
112 3300046616 Ga0495668_0000003 Ga0495668_0000003_152844_154196 427
113 3300047443 Ga0495687_001082 Ga0495687_001082_15168_16520 427
114 3300053156 Ga0500622_0000177 Ga0500622_0000177_60404_61756 427
115 3300053156 Ga0500622_0007435 Ga0500622_0007435_4223_5593 427
116 3300031456 Ga0307513_10222029 Ga0307513_102220291 428
117 3300049703 Ga0501219_000025 Ga0501219_000025_8652_10031 428
118 3300050005 Ga0501284_00009 Ga0501284_00009_47028_48407 428
119 3300003323 rootH1_10083756 rootH1_100837562 429
120 3300046460 Ga0495638_0033210 Ga0495638_0033210_696_2069 429
121 3300003320 rootH2_10005684 rootH2_1000568411 430

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00488

MutS_V

MutS domain V

285

470

0.92

PF05192

MutS_III

MutS domain III

32

237

0.63

Structural Annotation

Top 5 Hits

ID Description Score Start End
2wtu-assembly1.cif.gz_B crystal structure of escherichia coli muts in complex with a 16 basepair oligo containing an a.a mismatch. 0.6828 8 427
7ai6-assembly1.cif.gz_B muts in mismatch bound state 0.6792 12 424
7vuf-assembly1.cif.gz_B crystal structure of the core region of thermus thermophilus muts2. 0.6766 10 415
1wbd-assembly1.cif.gz_B crystal structure of e. coli dna mismatch repair enzyme muts, e38q mutant, in complex with a g.t mismatch 0.6732 6 427
7vuk-assembly1.cif.gz_A crystal structure of the core region of thermus thermophilus muts2 complexed with adp. 0.6694 6 405
ID Description Score Start End Superfamily
af_P26359_712_977_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.7645 234 426 3.40.50.300
af_P25847_638_962_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.7613 232 427 3.40.50.300
af_Q9VUM0_911_1190_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.7601 231 412 3.40.50.300
af_Q553L4_654_935_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.7586 231 424 3.40.50.300
af_C0H4L8_573_873_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.7583 233 426 3.40.50.300
ID Description Score Start End GO Terms
AF-U2HUL2-F1-model_v4 DNA mismatch repair proteins mutS family domain-containing protein 0.9026 1 417 GO:0005524
GO:0005829
GO:0006298
GO:0030983
GO:0140664
AF-A0A4Q7MUN6-F1-model_v4 MutS-like protein 0.8933 3 419 GO:0005524
GO:0005829
GO:0006298
GO:0030983
GO:0140664
AF-A0A7X0J0M4-F1-model_v4 DNA mismatch repair ATPase MutS 0.8921 1 415 GO:0005524
GO:0005829
GO:0006298
GO:0030983
GO:0140664
AF-J9DQL0-F1-model_v4 DNA mismatch repair proteins mutS family domain-containing protein 0.8869 300 417 GO:0005524
GO:0006298
GO:0030983
AF-A0A0Q5NV49-F1-model_v4 DNA mismatch repair proteins mutS family domain-containing protein 0.88 2 422 GO:0005524
GO:0006298
GO:0030983
GO:0140664

Feature Viewer

pLDDT pTM Quality
81.79 0.79 High
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Predicted Structure (AlphaFold2)

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