F105739

General Info

Members Datasets Scaffolds Average Seq Length
120 84 240 586

Family's Representative Sequence

Representative Sequence 3300009147|Ga0114129_10059582|Ga0114129_100595822
Length 650
Sequence MGFILNGLETEAYDRTYRDSELLGRIMSYFRPHARQMILIAGAITLNAAAGMGGPILIARSLDLLAQNPTVLAILLLSGGVLLLGVTAWGFNYIQQRLLARVVGSVVLKLREDVFNATIGHDLSFFDEHPSGKIVSRITSDTQDFAEVVNLSTNLMSQGLLVLLLSIWLFSLNVWXTLLLLAFAPIAINAQIQESISGIMVAKSFRQEQAIYGTFSHNNQQGYRAGLRRGLTLNTIFPLVGASAGLGVALLIYAGGLTSHSGLVSPGEWYLFMQAVGFFWFPLISIASFWSQFQDGLSASERVFALIDAEPKVVQLAAEPVGPHPPTPPFGRPLRRGGESPLPDTGRGPEGIGDETQANLSTPEPPEGGKFPLSSQERGLGGEVEFRHVHFSYNDNEIVLPDFSLTIAPQETIALVGHTGAGKSSIIKLLTRFYEFQGGQLLLDGRDIRRLDLSQYRRQLGLVSQTPFLFSASVGANIRYGRPEANDAEVRQAALGISGGDWLADLPRGLDTDVGERGANLSLGQRQLVALARVLLKDPTIFVLDEATASVDPFTEAQIQEGLDVVMRDRTSIVIAHRLSTIKNADRIIVMDHGRIVEEGNHASLLASGGHYAELYNTYFRHQSPYAYDSLFGHDPLKLTLTSDEINLEE

Samples

Sample ID Description Type Environment
1 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
11 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
12 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
17 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
18 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
19 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
20 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
21 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
22 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
23 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
24 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
25 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
26 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
27 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
28 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
29 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
39 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
40 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
41 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
42 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
43 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
44 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
45 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
46 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
47 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
48 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
49 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
50 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
51 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
52 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
53 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
54 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
55 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
56 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
57 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
58 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
59 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
60 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
61 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
62 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
63 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
64 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
65 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
66 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
67 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
68 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
69 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
70 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
71 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
72 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
73 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
74 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
75 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
76 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
77 2675903058 Actinopolymorpha cephalotaxi CPCC 202808 Isolate Rhizosphere
78 2675903060 Nonomuraea wenchangensis CGMCC 4.5598 Isolate Rhizosphere
79 2827628540 Actinopolymorpha cephalotaxi DSM 45117 Isolate Rhizosphere
80 2837268691 Jiangella endophytica KE2-3 Isolate Rhizosphere
81 2868088558 Phytoactinopolyspora endophytica EGI 60009 Isolate Unclassified
82 2884693830 Nonomuraea phyllanthi WYY166 Isolate Unclassified
83 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
84 2895442618 Nonomuraea phyllanthi PA1-10 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 92.5
Metatranscriptomes 0
Isolates 7.5

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 9.17
Rhizosphere 82.5
Stem 0
Stem Tuber 0
Unclassified 0.83

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0114129_10059582 3300009147 Bacteria 5337
2 rootH1_10113869 3300003323 Bacteria 2523
3 Ga0070658_10029058 3300005327 Bacteria 4440
4 Ga0070683_100003730 3300005329 Bacteria 12422
5 Ga0070680_100070954 3300005336 Bacteria 2862
6 Ga0070689_100027934 3300005340 Bacteria 4260
7 Ga0070691_10002004 3300005341 Bacteria 8983
8 Ga0070714_100054023 3300005435 Bacteria 3431
9 Ga0070713_100036668 3300005436 Bacteria 3958
10 Ga0070713_100062356 3300005436 Bacteria 3122
11 Ga0070708_100009102 3300005445 Bacteria 8007
12 Ga0070706_100000736 3300005467 Bacteria 36950
13 Ga0070706_100003828 3300005467 Bacteria 14707
14 Ga0070707_100003552 3300005468 Bacteria 14717
15 Ga0070707_100044784 3300005468 Bacteria 4236
16 Ga0070707_100077833 3300005468 Bacteria 3200
17 Ga0070698_100015008 3300005471 Bacteria 8189
18 Ga0070698_100104303 3300005471 Bacteria 2805
19 Ga0070699_100005173 3300005518 Bacteria 11477
20 Ga0070699_100038698 3300005518 Bacteria 4129
21 Ga0070684_100000155 3300005535 Bacteria 46926
22 Ga0070697_100060367 3300005536 Bacteria 3090
23 Ga0070696_100044648 3300005546 Bacteria 3069
24 Ga0068857_100000055 3300005577 Bacteria 62781
25 Ga0068856_100005269 3300005614 Bacteria 12753
26 Ga0068859_100080160 3300005617 Bacteria 3305
27 Ga0068861_100003913 3300005719 Bacteria 9961
28 Ga0081455_10118122 3300005937 Bacteria 2094
29 Ga0075428_100026478 3300006844 Bacteria 6419
30 Ga0075430_100040003 3300006846 Bacteria 3969
31 Ga0075433_10024252 3300006852 Bacteria 5117
32 Ga0075433_10060242 3300006852 Bacteria 3323
33 Ga0075429_100021384 3300006880 Bacteria 5609
34 Ga0075429_100045728 3300006880 Bacteria 3808
35 Ga0097620_100080159 3300006931 Bacteria 3305
36 Ga0114129_10013617 3300009147 Bacteria 11587
37 Ga0105249_10011580 3300009553 Bacteria 7752
38 Ga0105249_10019008 3300009553 Bacteria 6128
39 Ga0207684_10001246 3300025910 Bacteria 28272
40 Ga0207684_10018493 3300025910 Bacteria 5966
41 Ga0207693_10014323 3300025915 Bacteria 6379
42 Ga0207660_10083850 3300025917 Bacteria 2348
43 Ga0207646_10000401 3300025922 Bacteria 58046
44 Ga0207646_10112855 3300025922 Bacteria 2439
45 Ga0207661_10000270 3300025944 Bacteria 33527
46 Ga0207661_10013407 3300025944 Bacteria 5986
47 Ga0207708_10010538 3300026075 Bacteria 6862
48 Ga0207702_10007976 3300026078 Bacteria 8974
49 Ga0207674_10000359 3300026116 Bacteria 59073
50 Ga0207674_10021686 3300026116 Bacteria 6915
51 Ga0207675_100022901 3300026118 Bacteria 5810
52 Ga0316575_10003035 3300031665 Bacteria 5725
53 Ga0316579_10001824 3300031691 Bacteria 7863
54 Ga0316579_10021346 3300031691 Bacteria 2884
55 Ga0316579_10035632 3300031691 Bacteria 2294
56 Ga0316576_10001227 3300031727 Bacteria 13561
57 Ga0316578_10025848 3300031728 Bacteria 3305
58 Ga0316578_10073195 3300031728 Bacteria 2030
59 Ga0316577_10002159 3300031733 Bacteria 9636
60 Ga0316577_10009993 3300031733 Bacteria 5117
61 Ga0316577_10012197 3300031733 Bacteria 4679
62 Ga0316577_10053883 3300031733 Bacteria 2245
63 Ga0316577_10066833 3300031733 Bacteria 2007
64 Ga0316585_10007892 3300032137 Bacteria 3077
65 Ga0373956_0002354 3300035119 Bacteria 7742
66 Ga0316574_0023570 3300035398 Bacteria 3675
67 Ga0373927_0000030 3300035695 Bacteria 107610
68 Ga0373933_0003568 3300035724 Bacteria 8645
69 Ga0373933_0088555 3300035724 Unclassified 1907
70 Ga0316582_0004255 3300036647 Bacteria 7192
71 Ga0316582_0010429 3300036647 Bacteria 5088
72 Ga0316582_0054765 3300036647 Bacteria 2541
73 Ga0316582_0060850 3300036647 Bacteria 2421
74 Ga0316584_0001829 3300036712 Bacteria 13148
75 Ga0316584_0005060 3300036712 Bacteria 8788
76 Ga0316584_0019201 3300036712 Bacteria 4938
77 Ga0316581_0002372 3300037588 Bacteria 4497
78 Ga0436364_0245899 3300037853 Bacteria 12146
79 Ga0400486_19630 3300038742 Bacteria 2750
80 Ga0400489_39126 3300039093 Bacteria 29225
81 Ga0400489_60119 3300039093 Bacteria 19273
82 Ga0400489_77106 3300039093 Bacteria 6992
83 Ga0466972_0002768 3300044658 Bacteria 8687
84 Ga0466972_0006449 3300044658 Bacteria 5893
85 Ga0466965_0054755 3300044683 Bacteria 1984
86 Ga0466968_0000078 3300044735 Bacteria 28543
87 Ga0466960_0004064 3300044901 Bacteria 5680
88 Ga0466960_0004540 3300044901 Bacteria 5441
89 Ga0495674_0023096 3300047319 Bacteria 5732
90 Ga0496104_0011721 3300048907 Bacteria 7864
91 Ga0496105_0039714 3300048908 Bacteria 3880
92 Ga0496108_0000021 3300048911 Bacteria 215837
93 Ga0496108_0000077 3300048911 Bacteria 104725
94 Ga0496108_0000757 3300048911 Bacteria 25145
95 Ga0496108_0004163 3300048911 Bacteria 11639
96 Ga0496109_0001264 3300048912 Bacteria 21000
97 Ga0496110_0026121 3300048913 Bacteria 4994
98 Ga0496112_0001992 3300048915 Bacteria 16159
99 Ga0496115_0002175 3300048918 Bacteria 14030
100 Ga0496115_0005362 3300048918 Bacteria 9331
101 Ga0501034_0084289 3300049571 Bacteria 3180
102 Ga0501038_0022485 3300049574 Bacteria 5649
103 Ga0501047_0106173 3300049581 Bacteria 2689
104 Ga0501257_003279 3300049686 Bacteria 3460
105 Ga0501044_0008661 3300049823 Bacteria 11141
106 nmdc:mga05p37_50402_c1 3300050507 Bacteria 5120
107 nmdc:mga09592_39003_c1 3300050508 Bacteria 3989
108 nmdc:mga0qj67_21012_c1 3300050509 Bacteria 5005
109 nmdc:mga06r32_68576_c1 3300050510 Bacteria 3427
110 nmdc:mga0a205_27220_c1 3300050515 Bacteria 5461
111 nmdc:mga0a205_8766_c1 3300050515 Bacteria 6136
112 2515854217 2515154155 Bacteria 7985436
113 2676475397 2675903058 Bacteria 6822861
114 2676495812 2675903060 Bacteria 10051191
115 2827629672 2827628540 Bacteria 6858585
116 2837273388 2837268691 Bacteria 7850704
117 2868092882 2868088558 Bacteria 7609351
118 2884703460 2884693830 Bacteria 11273186
119 2895432200 2895427314 Bacteria 13147766
120 2895443515 2895442618 Bacteria 11027144
121 Ga0114129_10059582
122 rootH1_10113869
123 Ga0070658_10029058
124 Ga0070683_100003730
125 Ga0070680_100070954
126 Ga0070689_100027934
127 Ga0070691_10002004
128 Ga0070714_100054023
129 Ga0070713_100036668
130 Ga0070713_100062356
131 Ga0070708_100009102
132 Ga0070706_100000736
133 Ga0070706_100003828
134 Ga0070707_100003552
135 Ga0070707_100044784
136 Ga0070707_100077833
137 Ga0070698_100015008
138 Ga0070698_100104303
139 Ga0070699_100005173
140 Ga0070699_100038698
141 Ga0070684_100000155
142 Ga0070697_100060367
143 Ga0070696_100044648
144 Ga0068857_100000055
145 Ga0068856_100005269
146 Ga0068859_100080160
147 Ga0068861_100003913
148 Ga0081455_10118122
149 Ga0075428_100026478
150 Ga0075430_100040003
151 Ga0075433_10024252
152 Ga0075433_10060242
153 Ga0075429_100021384
154 Ga0075429_100045728
155 Ga0097620_100080159
156 Ga0114129_10013617
157 Ga0105249_10011580
158 Ga0105249_10019008
159 Ga0207684_10001246
160 Ga0207684_10018493
161 Ga0207693_10014323
162 Ga0207660_10083850
163 Ga0207646_10000401
164 Ga0207646_10112855
165 Ga0207661_10000270
166 Ga0207661_10013407
167 Ga0207708_10010538
168 Ga0207702_10007976
169 Ga0207674_10000359
170 Ga0207674_10021686
171 Ga0207675_100022901
172 Ga0316575_10003035
173 Ga0316579_10001824
174 Ga0316579_10021346
175 Ga0316579_10035632
176 Ga0316576_10001227
177 Ga0316578_10025848
178 Ga0316578_10073195
179 Ga0316577_10002159
180 Ga0316577_10009993
181 Ga0316577_10012197
182 Ga0316577_10053883
183 Ga0316577_10066833
184 Ga0316585_10007892
185 Ga0373956_0002354
186 Ga0316574_0023570
187 Ga0373927_0000030
188 Ga0373933_0003568
189 Ga0373933_0088555
190 Ga0316582_0004255
191 Ga0316582_0010429
192 Ga0316582_0054765
193 Ga0316582_0060850
194 Ga0316584_0001829
195 Ga0316584_0005060
196 Ga0316584_0019201
197 Ga0316581_0002372
198 Ga0436364_0245899
199 Ga0400486_19630
200 Ga0400489_39126
201 Ga0400489_60119
202 Ga0400489_77106
203 Ga0466972_0002768
204 Ga0466972_0006449
205 Ga0466965_0054755
206 Ga0466968_0000078
207 Ga0466960_0004064
208 Ga0466960_0004540
209 Ga0495674_0023096
210 Ga0496104_0011721
211 Ga0496105_0039714
212 Ga0496108_0000021
213 Ga0496108_0000077
214 Ga0496108_0000757
215 Ga0496108_0004163
216 Ga0496109_0001264
217 Ga0496110_0026121
218 Ga0496112_0001992
219 Ga0496115_0002175
220 Ga0496115_0005362
221 Ga0501034_0084289
222 Ga0501038_0022485
223 Ga0501047_0106173
224 Ga0501257_003279
225 Ga0501044_0008661
226 nmdc:mga05p37_50402_c1
227 nmdc:mga09592_39003_c1
228 nmdc:mga0qj67_21012_c1
229 nmdc:mga06r32_68576_c1
230 nmdc:mga0a205_27220_c1
231 nmdc:mga0a205_8766_c1
232 2515854217
233 2676475397
234 2676495812
235 2827629672
236 2837273388
237 2868092882
238 2884703460
239 2895432200
240 2895443515

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00664

ABC_membrane

ABC transporter transmembrane region

37

192

0.94

PF00664

ABC_membrane

ABC transporter transmembrane region

187

283

0.92

PF00005

ABC_tran

ABC transporter

400

549

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
5eum-assembly1.cif.gz_B 1.8 angstrom crystal structure of atp-binding component of fused lipid transporter subunits of abc superfamily from haemophilus influenzae. 0.9342 338 587
5eum-assembly1.cif.gz_A 1.8 angstrom crystal structure of atp-binding component of fused lipid transporter subunits of abc superfamily from haemophilus influenzae. 0.9313 338 587
2fgk-assembly2.cif.gz_B crystal structure of the abc-cassette e631q mutant of hlyb with bound atp 0.9282 352 586
2ghi-assembly1.cif.gz_A crystal structure of plasmodium yoelii multidrug resistance protein 2 0.9248 340 587
4q7l-assembly2.cif.gz_B structure of nbd288 of tm287/288 0.9245 350 586
ID Description Score Start End Superfamily
af_O53645_932_1184_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.946 342 593 3.40.50.300
5mkkA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9449 341 585 3.40.50.300
af_Q61102_466_725_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9434 348 587 3.40.50.300
af_Q2FVJ2_326_574_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9422 343 585 3.40.50.300
af_Q8T9W1_1574_1812_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9404 350 584 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A257Y822-F1-model_v4 ABC transporter domain-containing protein 0.9485 368 595 GO:0005524
GO:0016887
GO:0034040
AF-A0A353QG34-F1-model_v4 ABC transporter ATP-binding protein 0.9485 353 575 GO:0005524
GO:0016887
GO:0034040
AF-A0A3D3GPI7-F1-model_v4 ABC transporter domain-containing protein 0.9484 378 587 GO:0005524
GO:0016887
GO:0034040
AF-A0A699MRW0-F1-model_v4 deleted 0.9435 340 585
AF-A0A2A8D2P9-F1-model_v4 ABC transporter domain-containing protein 0.9417 346 585 GO:0005524
GO:0016887
GO:0034040

Map