F103904

General Info

Members Datasets Scaffolds Average Seq Length
119 81 238 268

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|8057345674|8057348372
Length 287
Sequence VGLTDTASASASAGLTGTAPALGFAVAVAQFAPGPDKAANLETIARLARTAVQRGASLVVFPEYSSFFVDPIGAESVANAEPLDGPFVTALGSIAAELNAHIIAGMVAESTEAGHFANVLVAVSPVDGLIAQYSKVHLYDAFGGRESDWVEAGTIGTPQTFSIEGVTIGMQTCYDIRFPEVSRWLVDAGADLVVVPAEWVRGPLKEHHWRTLVTARALENTIYVAAADQTPPIGVGASLVVDPMGVTIASLGEREDVAVAWIDPRRIDEVRRVNPALALRRFGNCVL

Samples

Sample ID Description Type Environment
1 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
2 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
3 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
4 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
5 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
6 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
7 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
8 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
9 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
10 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
11 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
12 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
13 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
14 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
15 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
16 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
17 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
18 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
19 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
20 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
21 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
22 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
23 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
24 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
25 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
26 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
27 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
28 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
29 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
30 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
31 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
32 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
33 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
34 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
35 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
36 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
37 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
38 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
39 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
40 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
41 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
42 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
43 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
44 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
45 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
46 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
47 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
48 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
49 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
50 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
51 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
52 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
53 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
54 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
55 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
56 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
57 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
58 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
59 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
60 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
61 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
62 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
63 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
64 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
65 8057345674 Herbiconiux aconitum CPCC 205763 Isolate Rhizosphere
66 2643221566 Microbacterium sp. Root166 Isolate Unclassified
67 2643221635 Yonghaparkia sp. Root332 Isolate Unclassified
68 2744054611 Aldersonia kunmingensis DSM 45001 Isolate Rhizosphere
69 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
70 2821268502 Microbacterium sp. YT0620BN Isolate Unclassified
71 2844852863 Herbiconiux flava DSM 26474 Isolate Rhizosphere
72 2852643534 Leifsonia sp. AK011 Isolate Rhizosphere
73 2857733635 Salinibacterium sp. R-73062 Isolate Unclassified
74 2857737099 Lysinimonas sp. R-73066 Isolate Unclassified
75 2862993130 Planctomonas deserti 13S1-3 v2 Isolate Rhizosphere
76 2870622029 Conyzicola lurida DSM 105784 Isolate Unclassified
77 2895660088 Leifsonia flava SYP-B2174 Isolate Rhizosphere
78 2919443155 Agromyces sp. 3263 Isolate Rhizosphere
79 2939657138 Conyzicola nivalis 2857 Isolate Rhizosphere
80 2964326757 Planctomonas psychrotolerans J5903 Isolate Rhizosphere
81 8056037122 Herbiconiux gentiana CPCC 205716 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 85.71
Metatranscriptomes 0
Isolates 14.29

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 30.25
Nodule 0
Rhizoplane 5.88
Rhizosphere 49.58
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070670_100310563 3300005331 Bacteria 1380
2 Ga0070670_100362873 3300005331 Bacteria 1274
3 Ga0070668_100230421 3300005347 Bacteria 1531
4 Ga0070667_100075886 3300005367 Bacteria 2870
5 Ga0070700_100382004 3300005441 Bacteria 1054
6 Ga0075365_10044882 3300006038 Bacteria 2898
7 Ga0075363_100081977 3300006048 Bacteria 1765
8 Ga0075364_10046199 3300006051 Bacteria 2835
9 Ga0075369_10121186 3300006186 Bacteria 1184
10 Ga0105249_10139044 3300009553 Bacteria 2327
11 Ga0157371_10005380 3300013102 Bacteria 10814
12 Ga0157380_10036332 3300014326 Bacteria 3810
13 Ga0207692_10180859 3300025898 Bacteria 1228
14 Ga0207685_10247961 3300025905 Bacteria 860
15 Ga0207712_10276282 3300025961 Bacteria 1369
16 Ga0207668_10334728 3300025972 Bacteria 1261
17 Ga0207708_10268809 3300026075 Bacteria 1378
18 Ga0207675_100011367 3300026118 Bacteria 8331
19 Ga0307514_10006388 3300031649 Bacteria 10274
20 Ga0307413_10143429 3300031824 Bacteria 1654
21 Ga0395900_0189389 3300037418 Bacteria 2088
22 Ga0439465_0053070 3300041413 Bacteria 1331
23 Ga0451793_0661676 3300041452 Bacteria 1776
24 Ga0451797_0596383 3300041453 Bacteria 925
25 Ga0451797_1138265 3300041453 Bacteria 906
26 Ga0466965_0000023 3300044683 Bacteria 61686
27 Ga0495590_0003896 3300046457 Bacteria 6070
28 Ga0495650_0000913 3300046471 Bacteria 34787
29 Ga0495672_0007364 3300047320 Bacteria 8289
30 Ga0495672_0015839 3300047320 Bacteria 5104
31 Ga0495686_0045181 3300047472 Bacteria 2787
32 Ga0496104_0542388 3300048907 Bacteria 1074
33 Ga0496105_0062903 3300048908 Bacteria 3062
34 Ga0496114_0009079 3300048917 Bacteria 7885
35 Ga0496115_0023752 3300048918 Bacteria 4759
36 Ga0496117_0000120 3300048920 Bacteria 171697
37 Ga0496119_0006775 3300048922 Bacteria 10507
38 Ga0496119_0044647 3300048922 Bacteria 2787
39 Ga0496120_0187493 3300048923 Bacteria 1011
40 Ga0496122_0005950 3300048925 Bacteria 14280
41 Ga0496122_0015687 3300048925 Bacteria 7224
42 Ga0496123_0004018 3300048926 Bacteria 15896
43 Ga0496123_0077229 3300048926 Bacteria 2046
44 Ga0496126_0501483 3300048929 Bacteria 970
45 Ga0501034_0038069 3300049571 Bacteria 4872
46 Ga0501034_0061824 3300049571 Bacteria 3760
47 Ga0501034_0068141 3300049571 Bacteria 3570
48 Ga0501034_0131426 3300049571 Bacteria 2486
49 Ga0501034_0137990 3300049571 Bacteria 2419
50 Ga0501034_0292835 3300049571 Bacteria 1565
51 Ga0501034_0482802 3300049571 Bacteria 1154
52 Ga0501038_0034428 3300049574 Bacteria 4453
53 Ga0501038_0097795 3300049574 Bacteria 2448
54 Ga0501043_0081259 3300049579 Bacteria 2546
55 Ga0501043_0274785 3300049579 Bacteria 1293
56 Ga0501043_0290009 3300049579 Bacteria 1253
57 Ga0501046_0012403 3300049580 Bacteria 7256
58 Ga0501046_0103221 3300049580 Bacteria 2186
59 Ga0501047_0029294 3300049581 Bacteria 5310
60 Ga0501047_0085572 3300049581 Bacteria 3029
61 Ga0501070_0014996 3300049586 Bacteria 6521
62 Ga0501070_0040297 3300049586 Bacteria 3895
63 Ga0501071_0000192 3300049587 Bacteria 27460
64 Ga0501071_0362472 3300049587 Bacteria 1104
65 Ga0501072_0044677 3300049588 Bacteria 3483
66 Ga0501073_0000057 3300049589 Bacteria 70842
67 Ga0501080_0002369 3300049742 Bacteria 16440
68 Ga0501035_0106247 3300049822 Bacteria 2461
69 Ga0501044_0089254 3300049823 Bacteria 3111
70 Ga0501044_0134281 3300049823 Bacteria 2467
71 nmdc:mga03n38_36041_c1 3300050490 Bacteria 2124
72 nmdc:mga00v17_22201_c1 3300050491 Bacteria 3659
73 nmdc:mga0sz30_15929_c1 3300050516 Bacteria 2976
74 Ga0500635_0000136 3300053080 Bacteria 42646
75 Ga0500643_000171 3300053087 Bacteria 63766
76 Ga0500556_0000007 3300053104 Bacteria 331400
77 Ga0500556_0000566 3300053104 Bacteria 24569
78 Ga0500556_0029564 3300053104 Bacteria 1849
79 Ga0500655_007027 3300053133 Bacteria 2024
80 Ga0500559_0000866 3300053136 Bacteria 19450
81 Ga0500559_0002330 3300053136 Bacteria 9949
82 Ga0500559_0003093 3300053136 Bacteria 8287
83 Ga0500559_0030701 3300053136 Bacteria 2305
84 Ga0500559_0139290 3300053136 Bacteria 1135
85 Ga0500568_0000079 3300053139 Bacteria 92754
86 Ga0500568_0000154 3300053139 Bacteria 59534
87 Ga0500568_0034538 3300053139 Bacteria 2068
88 Ga0500573_0000446 3300053140 Bacteria 17765
89 Ga0500573_0000964 3300053140 Bacteria 13168
90 Ga0500573_0006696 3300053140 Bacteria 6251
91 Ga0500573_0073818 3300053140 Bacteria 1943
92 Ga0500573_0119642 3300053140 Bacteria 1467
93 Ga0500573_0178730 3300053140 Bacteria 1142
94 Ga0500573_0191562 3300053140 Bacteria 1091
95 Ga0500577_0002513 3300053142 Bacteria 4697
96 Ga0500577_0012434 3300053142 Bacteria 2574
97 Ga0500588_0001218 3300053146 Bacteria 4767
98 Ga0500616_0000183 3300053153 Bacteria 103074
99 Ga0500616_0000410 3300053153 Bacteria 58241
100 Ga0500616_0004309 3300053153 Bacteria 10205
101 Ga0500616_0026467 3300053153 Bacteria 3210
102 Ga0500645_026122 3300053730 Bacteria 1777
103 8057348372 8057345674 Bacteria 4160394
104 2643848741 2643221566 Bacteria 3460379
105 2644198297 2643221635 Bacteria 2632343
106 2744957176 2744054611 Bacteria 5611514
107 2816503815 2816332139 Bacteria 9138787
108 2821270350 2821268502 Bacteria 3750023
109 2844855862 2844852863 Bacteria 3849151
110 2852644936 2852643534 Bacteria 3013378
111 2857736686 2857733635 Bacteria 3532004
112 2857738292 2857737099 Bacteria 3104305
113 2862995322 2862993130 Bacteria 3860849
114 2870622867 2870622029 Bacteria 3643329
115 2895663221 2895660088 Bacteria 3782833
116 2919446740 2919443155 Bacteria 4072969
117 2939657262 2939657138 Bacteria 3740283
118 2964329007 2964326757 Bacteria 3290868
119 8056039737 8056037122 Bacteria 3854319
120 Ga0070670_100310563
121 Ga0070670_100362873
122 Ga0070668_100230421
123 Ga0070667_100075886
124 Ga0070700_100382004
125 Ga0075365_10044882
126 Ga0075363_100081977
127 Ga0075364_10046199
128 Ga0075369_10121186
129 Ga0105249_10139044
130 Ga0157371_10005380
131 Ga0157380_10036332
132 Ga0207692_10180859
133 Ga0207685_10247961
134 Ga0207712_10276282
135 Ga0207668_10334728
136 Ga0207708_10268809
137 Ga0207675_100011367
138 Ga0307514_10006388
139 Ga0307413_10143429
140 Ga0395900_0189389
141 Ga0439465_0053070
142 Ga0451793_0661676
143 Ga0451797_0596383
144 Ga0451797_1138265
145 Ga0466965_0000023
146 Ga0495590_0003896
147 Ga0495650_0000913
148 Ga0495672_0007364
149 Ga0495672_0015839
150 Ga0495686_0045181
151 Ga0496104_0542388
152 Ga0496105_0062903
153 Ga0496114_0009079
154 Ga0496115_0023752
155 Ga0496117_0000120
156 Ga0496119_0006775
157 Ga0496119_0044647
158 Ga0496120_0187493
159 Ga0496122_0005950
160 Ga0496122_0015687
161 Ga0496123_0004018
162 Ga0496123_0077229
163 Ga0496126_0501483
164 Ga0501034_0038069
165 Ga0501034_0061824
166 Ga0501034_0068141
167 Ga0501034_0131426
168 Ga0501034_0137990
169 Ga0501034_0292835
170 Ga0501034_0482802
171 Ga0501038_0034428
172 Ga0501038_0097795
173 Ga0501043_0081259
174 Ga0501043_0274785
175 Ga0501043_0290009
176 Ga0501046_0012403
177 Ga0501046_0103221
178 Ga0501047_0029294
179 Ga0501047_0085572
180 Ga0501070_0014996
181 Ga0501070_0040297
182 Ga0501071_0000192
183 Ga0501071_0362472
184 Ga0501072_0044677
185 Ga0501073_0000057
186 Ga0501080_0002369
187 Ga0501035_0106247
188 Ga0501044_0089254
189 Ga0501044_0134281
190 nmdc:mga03n38_36041_c1
191 nmdc:mga00v17_22201_c1
192 nmdc:mga0sz30_15929_c1
193 Ga0500635_0000136
194 Ga0500643_000171
195 Ga0500556_0000007
196 Ga0500556_0000566
197 Ga0500556_0029564
198 Ga0500655_007027
199 Ga0500559_0000866
200 Ga0500559_0002330
201 Ga0500559_0003093
202 Ga0500559_0030701
203 Ga0500559_0139290
204 Ga0500568_0000079
205 Ga0500568_0000154
206 Ga0500568_0034538
207 Ga0500573_0000446
208 Ga0500573_0000964
209 Ga0500573_0006696
210 Ga0500573_0073818
211 Ga0500573_0119642
212 Ga0500573_0178730
213 Ga0500573_0191562
214 Ga0500577_0002513
215 Ga0500577_0012434
216 Ga0500588_0001218
217 Ga0500616_0000183
218 Ga0500616_0000410
219 Ga0500616_0004309
220 Ga0500616_0026467
221 Ga0500645_026122
222 8057348372
223 2643848741
224 2644198297
225 2744957176
226 2816503815
227 2821270350
228 2844855862
229 2852644936
230 2857736686
231 2857738292
232 2862995322
233 2870622867
234 2895663221
235 2919446740
236 2939657262
237 2964329007
238 8056039737

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00795

CN_hydrolase

Carbon-nitrogen hydrolase

25

272

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
1ems-assembly1.cif.gz_A crystal structure of the c. elegans nitfhit protein 0.9117 10 269
5h8l-assembly2.cif.gz_P crystal structure of medicago truncatula n-carbamoylputrescine amidohydrolase (mtcpa) c158s mutant in complex with putrescine 0.9092 11 269
7ovg-assembly1.cif.gz_B the c146a variant of an amidase from pyrococcus horikoshii with bound acetamide 0.9075 11 269
2vhh-assembly1.cif.gz_C crystal structure of a pyrimidine degrading enzyme from drosophila melanogaster 0.9029 11 269
5h8i-assembly2.cif.gz_I crystal structure of medicago truncatula n-carbamoylputrescine amidohydrolase (mtcpa) in complex with n-(dihydroxymethyl)putrescine 0.9023 8 269
ID Description Score Start End Superfamily
af_P0DP64_2_182_3.60.110.10 Alpha Beta;4-Layer Sandwich;Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase;Carbon-nitrogen hydrolase 0.9537 87 271 3.60.110.10
af_P0DP64_2_182_3.60.110.10 Alpha Beta;4-Layer Sandwich;Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase;Carbon-nitrogen hydrolase 0.9486 87 271 3.60.110.10
af_Q557J5_4_291_3.60.110.10 Alpha Beta;4-Layer Sandwich;Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase;Carbon-nitrogen hydrolase 0.9299 8 272 3.60.110.10
af_Q8VDK1_45_315_3.60.110.10 Alpha Beta;4-Layer Sandwich;Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase;Carbon-nitrogen hydrolase 0.9279 14 269 3.60.110.10
af_P9WJ01_1_273_3.60.110.10 Alpha Beta;4-Layer Sandwich;Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase;Carbon-nitrogen hydrolase 0.9206 11 274 3.60.110.10
ID Description Score Start End GO Terms
AF-A0A7W1UJL6-F1-model_v4 CN hydrolase domain-containing protein 0.9887 154 269
AF-A0A2M9BWL9-F1-model_v4 Putative amidohydrolase 0.9882 11 275 GO:0016787
AF-A0A4R4ZNA9-F1-model_v4 Carbon-nitrogen hydrolase family protein 0.9879 13 246 GO:0016787
AF-A0A7G9XSP7-F1-model_v4 Carbon-nitrogen hydrolase family protein 0.9843 11 274 GO:0016787
AF-A0A838SNM9-F1-model_v4 Hydrolase 0.9812 145 273 GO:0016787

Map