F103835

General Info

Members Datasets Scaffolds Average Seq Length
119 97 238 334

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2895880812|2895890834
Length 380
Sequence TTDGQEAARVASVAGLPAGGTARVGPAAVGAAAGGLAPRGWVLRDRADRLSLRVDGRSVAVCGALLAVLAAVCVATMITGEYAVSPREVFDSLRGQGSAGTDFVVVTLRLPRLLTGLMVGAALAVSGAIFQTMTANPLGSPDIIGFTAGSATGAVVVILVLHGTVYETSLGAVAGGVVTAVAIYLLSFRRGVAGPRLILVGIGAAAMLTALNSYLITRATLGDAITAQTWLLGSLNRRGWEEVRPLAVAVAVLLPAAACYGRRMSMLTMGGDTAKALGVPVERSRLALLAVGAALASCATAAAGPIGFVALAAPQLARHLARSPGAALLPTALLGALLVASSDLAAQRAFAPTQLPVGVATNAVGGIYLVWLLSRQRRGL

Samples

Sample ID Description Type Environment
1 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
2 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
4 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
5 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
6 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
7 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
8 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
9 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
10 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
11 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
12 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
13 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
14 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
15 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
16 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
17 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
18 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
19 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
20 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
21 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
22 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
23 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
24 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
25 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
26 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
27 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
28 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
29 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
30 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
31 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
32 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
33 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
34 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
35 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
36 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
37 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
38 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
39 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
40 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
41 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
42 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
43 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
44 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
45 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
46 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
47 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
48 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
49 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
50 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
51 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
52 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
53 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
54 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
55 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
56 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
57 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
58 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
59 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
60 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
61 2895880812 Frankia sp. BMG5.11 Isolate Unclassified
62 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
63 2554235227 Arthrobacter sp. PAO19 Isolate Rhizosphere
64 2585428157 Microbacterium sp. CF335 Isolate Rhizosphere
65 2593339131 Bacillus sp. UNCCL81 Isolate Unclassified
66 2626541554 Frankia sp. AvcI.1 Isolate Nodule
67 2643221575 Microbacterium sp. Root61 Isolate Unclassified
68 2643221578 Streptomyces sp. Root63 Isolate Unclassified
69 2643221604 Nocardioides sp. Root190 Isolate Unclassified
70 2643221649 Leifsonia sp. Root4 Isolate Unclassified
71 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
72 2671180195 Frankia sp. CcI49 Isolate Nodule
73 2684623035 Frankia sp. NRRL B-16219 Isolate Rhizosphere
74 2687453743 Frankia colletiae Cc1.17 Isolate Nodule
75 2728369276 Kineococcus rhizosphaerae DSM 19711 Isolate Rhizosphere
76 2757320391 Bacillus sp. NFR08 Isolate Rhizoplane
77 2773857922 Frankia sp. CcI49 Isolate Nodule
78 2775507177 Bacillus sp. AFS055030 Isolate Unclassified
79 2775507192 Bacillus sp. AFS041924 Isolate Unclassified
80 2831935698 Jishengella sp. AZ1-13 Isolate Unclassified
81 2832004796 Micromonospora endophytica JCM 18317 Isolate Unclassified
82 2852677369 Pseudoclavibacter sp. JAI123 Isolate Rhizosphere
83 2857531043 Neorhizobium sp. R-72160 Isolate Unclassified
84 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
85 2866612099 Amycolatopsis suaedae 8-3EHSu Isolate Unclassified
86 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
87 2891326441 Actinokineospora pegani TRM65233 Isolate Unclassified
88 2906799679 Microbacterium karelineae TRM80801 Isolate Unclassified
89 2919395869 Microbacterium resistens 2980 Isolate Unclassified
90 2936340661 Gottfriedia acidiceleris 1-17 Isolate Rhizosphere
91 2946041624 Microbacterium natoriense W4I9-1 Isolate Rhizosphere
92 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
93 2974324384 Microbacterium sp. SORGH_AS 344 Isolate Unclassified
94 8054913762 Frankia gtarii Agncl-10 Isolate Nodule
95 8055157932 Frankia umida Ag45/Mut15 Isolate Nodule
96 8056060235 Nocardiopsis endophytica RSe5-2 Isolate Unclassified
97 8056447290 Streptomyces huiliensis SCA2-4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 67.23
Metatranscriptomes 0
Isolates 32.77

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 25.21
Nodule 8.4
Rhizoplane 8.4
Rhizosphere 31.09
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0055532_1000052 3300003758 Bacteria 164911
2 Ga0065714_10077087 3300005288 Bacteria 2720
3 Ga0070667_100216821 3300005367 Bacteria 1702
4 Ga0070665_100115117 3300005548 Bacteria 2691
5 Ga0070665_100392688 3300005548 Bacteria 1395
6 Ga0081538_10003135 3300005981 Bacteria 15716
7 Ga0075365_10000805 3300006038 Bacteria 12888
8 Ga0075365_10068226 3300006038 Bacteria 2389
9 Ga0075365_10106228 3300006038 Bacteria 1926
10 Ga0075365_10130445 3300006038 Bacteria 1739
11 Ga0075363_100012666 3300006048 Bacteria 4068
12 Ga0075364_10000285 3300006051 Bacteria 24819
13 Ga0075364_10032722 3300006051 Bacteria 3344
14 Ga0075364_10063903 3300006051 Bacteria 2416
15 Ga0075364_10067158 3300006051 Bacteria 2357
16 Ga0075369_10011269 3300006186 Bacteria 3515
17 Ga0075370_10028033 3300006353 Bacteria 3128
18 Ga0075428_100047847 3300006844 Bacteria 4696
19 Ga0079104_1000014 3300006946 Bacteria 337362
20 Ga0111539_10013104 3300009094 Bacteria 10372
21 Ga0105245_10200528 3300009098 Bacteria 1916
22 Ga0114129_10587016 3300009147 Bacteria 1445
23 Ga0157376_10048685 3300014969 Bacteria 3507
24 Ga0209147_100028 3300025229 Bacteria 383994
25 Ga0207658_10100938 3300025986 Bacteria 2260
26 Ga0209281_1000032 3300027111 Bacteria 401727
27 Ga0307515_10000148 3300028794 Bacteria 170303
28 Ga0307513_10129529 3300031456 Bacteria 2472
29 Ga0307516_10002577 3300031730 Bacteria 24066
30 Ga0307405_10093446 3300031731 Bacteria 1998
31 Ga0307405_10124353 3300031731 Bacteria 1771
32 Ga0307407_10090298 3300031903 Bacteria 1876
33 Ga0307415_100024740 3300032126 Bacteria 3756
34 Ga0307507_10040752 3300033179 Bacteria 4659
35 Ga0307507_10061613 3300033179 Bacteria 3492
36 Ga0451791_0857588 3300041451 Bacteria 10672
37 Ga0451793_0008513 3300041452 Bacteria 4806
38 Ga0451797_0495808 3300041453 Bacteria 3835
39 Ga0451843_0007920 3300041509 Bacteria 2336
40 Ga0451853_0946832 3300041512 Bacteria 6132
41 Ga0495632_0103691 3300046519 Bacteria 1339
42 Ga0495625_0000213 3300046660 Bacteria 91768
43 Ga0495685_062447 3300047447 Bacteria 1254
44 Ga0496102_0014517 3300048905 Bacteria 6844
45 Ga0496102_0287820 3300048905 Bacteria 1549
46 Ga0496103_0177083 3300048906 Bacteria 1370
47 Ga0496108_0000003 3300048911 Bacteria 595687
48 Ga0496108_0000065 3300048911 Bacteria 117405
49 Ga0496114_0012673 3300048917 Bacteria 6753
50 Ga0496122_0090843 3300048925 Bacteria 2082
51 Ga0496124_0125105 3300048927 Bacteria 2049
52 Ga0496125_0000290 3300048928 Bacteria 99343
53 Ga0496125_0018646 3300048928 Bacteria 6584
54 Ga0496125_0034866 3300048928 Bacteria 4427
55 Ga0496126_0122665 3300048929 Bacteria 2252
56 Ga0501034_0002077 3300049571 Bacteria 25018
57 Ga0501034_0002967 3300049571 Bacteria 19661
58 Ga0501034_0003404 3300049571 Bacteria 18144
59 Ga0501043_0149846 3300049579 Bacteria 1826
60 Ga0501070_0008304 3300049586 Bacteria 8774
61 Ga0501070_0041568 3300049586 Bacteria 3830
62 Ga0501074_0021659 3300049590 Bacteria 4667
63 nmdc:mga03n38_6359_c1 3300050490 Bacteria 4098
64 nmdc:mga00v17_14_c1 3300050491 Bacteria 126589
65 nmdc:mga00v17_21011_c1 3300050491 Bacteria 3748
66 nmdc:mga00v17_40054_c1 3300050491 Bacteria 2809
67 nmdc:mga0yw44_28251_c1 3300050492 Bacteria 3225
68 nmdc:mga0yw44_89555_c1 3300050492 Bacteria 1942
69 nmdc:mga0k408_9416_c1 3300050493 Bacteria 5263
70 nmdc:mga07m45_11605_c1 3300050496 Bacteria 4632
71 nmdc:mga08y16_30313_c1 3300050511 Bacteria 5694
72 Ga0500607_002989 3300053121 Bacteria 12827
73 Ga0500559_0000808 3300053136 Bacteria 20429
74 Ga0500568_0004840 3300053139 Bacteria 7111
75 Ga0500573_0007637 3300053140 Bacteria 5911
76 Ga0500573_0014623 3300053140 Bacteria 4443
77 Ga0500577_0006305 3300053142 Bacteria 3261
78 Ga0500604_0000774 3300053151 Bacteria 8793
79 Ga0500624_000020 3300053157 Bacteria 118392
80 Ga0500637_0000022 3300053178 Bacteria 61494
81 2895890834 2895880812 Bacteria 11255272
82 2515853819 2515154155 Bacteria 7985436
83 2555229416 2554235227 Bacteria 3637389
84 2588108120 2585428157 Bacteria 3018951
85 2595090594 2593339131 Bacteria 5116855
86 2626638904 2626541554 Bacteria 7741902
87 2643885686 2643221575 Bacteria 4022601
88 2643904957 2643221578 Bacteria 9213798
89 2644033712 2643221604 Bacteria 5014917
90 2644278543 2643221649 Bacteria 3867359
91 2644403016 2643221673 Bacteria 9196637
92 2671833224 2671180195 Bacteria 9757215
93 2671835621 2671180195 Bacteria 9757215
94 2686539167 2684623035 Bacteria 8032739
95 2689992460 2687453743 Bacteria 8361025
96 2729908909 2728369276 Bacteria 5610032
97 2757568740 2757320391 Bacteria 4746095
98 2774851380 2773857922 Bacteria 9757215
99 2774853777 2773857922 Bacteria 9757215
100 2777761832 2775507177 Bacteria 4384303
101 2777838289 2775507192 Bacteria 4622234
102 2831937907 2831935698 Bacteria 5963223
103 2832007521 2832004796 Bacteria 6538017
104 2852678804 2852677369 Bacteria 3768884
105 2857536897 2857531043 Bacteria 6754041
106 2866068866 2866065130 Bacteria 6518152
107 2866617885 2866612099 Bacteria 7543886
108 2875392404 2875391855 Bacteria 7600475
109 2891327009 2891326441 Bacteria 6439512
110 2906800003 2906799679 Bacteria 4031749
111 2919398250 2919395869 Bacteria 3704152
112 2936344864 2936340661 Bacteria 5139038
113 2946043109 2946041624 Bacteria 4191385
114 2946052438 2946045630 Bacteria 8527308
115 2974324521 2974324384 Bacteria 3750535
116 8054915382 8054913762 Bacteria 7713009
117 8055160332 8055157932 Bacteria 6429399
118 8056060503 8056060235 Bacteria 7259403
119 8056448737 8056447290 Bacteria 7680491
120 Ga0055532_1000052
121 Ga0065714_10077087
122 Ga0070667_100216821
123 Ga0070665_100115117
124 Ga0070665_100392688
125 Ga0081538_10003135
126 Ga0075365_10000805
127 Ga0075365_10068226
128 Ga0075365_10106228
129 Ga0075365_10130445
130 Ga0075363_100012666
131 Ga0075364_10000285
132 Ga0075364_10032722
133 Ga0075364_10063903
134 Ga0075364_10067158
135 Ga0075369_10011269
136 Ga0075370_10028033
137 Ga0075428_100047847
138 Ga0079104_1000014
139 Ga0111539_10013104
140 Ga0105245_10200528
141 Ga0114129_10587016
142 Ga0157376_10048685
143 Ga0209147_100028
144 Ga0207658_10100938
145 Ga0209281_1000032
146 Ga0307515_10000148
147 Ga0307513_10129529
148 Ga0307516_10002577
149 Ga0307405_10093446
150 Ga0307405_10124353
151 Ga0307407_10090298
152 Ga0307415_100024740
153 Ga0307507_10040752
154 Ga0307507_10061613
155 Ga0451791_0857588
156 Ga0451793_0008513
157 Ga0451797_0495808
158 Ga0451843_0007920
159 Ga0451853_0946832
160 Ga0495632_0103691
161 Ga0495625_0000213
162 Ga0495685_062447
163 Ga0496102_0014517
164 Ga0496102_0287820
165 Ga0496103_0177083
166 Ga0496108_0000003
167 Ga0496108_0000065
168 Ga0496114_0012673
169 Ga0496122_0090843
170 Ga0496124_0125105
171 Ga0496125_0000290
172 Ga0496125_0018646
173 Ga0496125_0034866
174 Ga0496126_0122665
175 Ga0501034_0002077
176 Ga0501034_0002967
177 Ga0501034_0003404
178 Ga0501043_0149846
179 Ga0501070_0008304
180 Ga0501070_0041568
181 Ga0501074_0021659
182 nmdc:mga03n38_6359_c1
183 nmdc:mga00v17_14_c1
184 nmdc:mga00v17_21011_c1
185 nmdc:mga00v17_40054_c1
186 nmdc:mga0yw44_28251_c1
187 nmdc:mga0yw44_89555_c1
188 nmdc:mga0k408_9416_c1
189 nmdc:mga07m45_11605_c1
190 nmdc:mga08y16_30313_c1
191 Ga0500607_002989
192 Ga0500559_0000808
193 Ga0500568_0004840
194 Ga0500573_0007637
195 Ga0500573_0014623
196 Ga0500577_0006305
197 Ga0500604_0000774
198 Ga0500624_000020
199 Ga0500637_0000022
200 2895890834
201 2515853819
202 2555229416
203 2588108120
204 2595090594
205 2626638904
206 2643885686
207 2643904957
208 2644033712
209 2644278543
210 2644403016
211 2671833224
212 2671835621
213 2686539167
214 2689992460
215 2729908909
216 2757568740
217 2774851380
218 2774853777
219 2777761832
220 2777838289
221 2831937907
222 2832007521
223 2852678804
224 2857536897
225 2866068866
226 2866617885
227 2875392404
228 2891327009
229 2906800003
230 2919398250
231 2936344864
232 2946043109
233 2946052438
234 2974324521
235 8054915382
236 8055160332
237 8056060503
238 8056448737

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01032

FecCD

FecCD transport family

65

375

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
4dbl-assembly2.cif.gz_F crystal structure of e159q mutant of btucdf 0.9252 23 341
5b57-assembly1.cif.gz_A inward-facing conformation of abc heme importer bhuuv from burkholderia cenocepacia 0.9177 25 342
2nq2-assembly1.cif.gz_B an inward-facing conformation of a putative metal-chelate type abc transporter. 0.9083 25 341
2nq2-assembly1.cif.gz_A an inward-facing conformation of a putative metal-chelate type abc transporter. 0.9065 26 342
5b58-assembly1.cif.gz_B inward-facing conformation of abc heme importer bhuuv in complex with periplasmic heme binding protein bhut from burkholderia cenocepacia 0.9025 25 342
ID Description Score Start End Superfamily
af_P23877_5_330_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.9514 22 346 1.10.3470.10
af_P23877_5_330_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.9458 22 346 1.10.3470.10
af_Q2G1N6_1_303_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.9369 45 341 1.10.3470.10
af_Q2G1Z1_6_337_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.934 23 344 1.10.3470.10
af_Q2FW76_16_342_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.9304 23 345 1.10.3470.10
ID Description Score Start End GO Terms
AF-A0A433YBP4-F1-model_v4 Iron-enterobactin ABC transporter permease 0.9875 26 348 GO:0005886
GO:0022857
GO:0033214
AF-A0A433YBP4-F1-model_v4 Iron-enterobactin ABC transporter permease 0.9845 26 348 GO:0005886
GO:0022857
GO:0033214
AF-A0A6C0G242-F1-model_v4 Iron chelate uptake ABC transporter family permease subunit 0.9825 1 348 GO:0005886
GO:0022857
GO:0033214
AF-A0A1Q8JMX9-F1-model_v4 ABC-type Fe3+-siderophore transport system, permease 2 component 0.9747 9 347 GO:0005886
GO:0022857
GO:0033214
AF-A0A1V2KRF9-F1-model_v4 Iron ABC transporter permease 0.9741 17 346 GO:0005886
GO:0022857
GO:0033214

Map