F103816

General Info

Members Datasets Scaffolds Average Seq Length
119 100 90 490

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2839986021|2839987775
Length 543
Sequence PRPTAEHLDQDRPAAPAAVGPPPVPLRTEGILERLARLRAADAPTHGGRVLSYVYDPGLAELDELAGAAARAVLPVNGLDPTTFTSVAVMERELVAFARDMLHGPAAGPDAVVGSVTSGGTESCLLAVKAARDELLSRRPGARPRLVAPVSAHAAFRKAAQYLGLSLTLVPVDPVTGVPAAADVVAELDRPGADGDVALVVVSAPSYPYGVVDPVVDVAAAAAQRGVPVHVDACVGGWVLPFWELAGGDTVPAFDFAVPGVTSISADVHKYGYGPKGASVLLVRGRDRQRHQFFATTGWPGYPVVNSGVSGSRSAAPLAAGWAVSQALGTEGYTALTARCVRATRVLHGAVAGIEGLRVVGPPTGPLLAVATDEGVAPARRVDPHVWADAVRSRGWVLQPQPGLVQDDGTRLPHTTHLTVTPVTEAGLGGLVPALVASADEVRGTPRPDTSPALGALAGLTGPAGGAAPTSDEVWGVLRAVLGAPEDGSAGSVVPSRLAPLMSMMESLPAATAERLLVELLARVAEPVDEPVDEPVGGAARAG

Samples

Sample ID Description Type Environment
1 2585428094 Herbiconiux sp. YR403 Isolate Rhizosphere
2 2643221549 Agromyces sp. Root1464 Isolate Unclassified
3 2643221613 Oerskovia sp. Root22 Isolate Unclassified
4 2643221616 Leifsonia sp. Root227 Isolate Unclassified
5 2643221632 Leifsonia sp. Root112D2 Isolate Unclassified
6 2643221649 Leifsonia sp. Root4 Isolate Unclassified
7 2643221690 Cellulomonas sp. Root485 Isolate Unclassified
8 2643221721 Oerskovia sp. Root918 Isolate Unclassified
9 2721755702 Agromyces sp. AR33 Isolate Rhizosphere
10 2738543011 Rhodococcus sp. OK611 Isolate Unclassified
11 2839986021 Cellulosimicrobium cellulans JZ5 Isolate Unclassified
12 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
13 2852643534 Leifsonia sp. AK011 Isolate Rhizosphere
14 2857733635 Salinibacterium sp. R-73062 Isolate Unclassified
15 2857737099 Lysinimonas sp. R-73066 Isolate Unclassified
16 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
17 2884994152 Cellulomonas sp. H30R-01 Isolate Rhizosphere
18 2887443736 Ruania rhizosphaerae LNNU 22110 Isolate Rhizosphere
19 2889300758 Rhodococcus sp. PvR099 Isolate Rhizosphere
20 2919055335 Leifsonia sp. 1010 Isolate Rhizosphere
21 2919523602 Leifsonia shinshuensis 3821 Isolate Unclassified
22 2928153084 Leifsonia sp. 563 Isolate Unclassified
23 2932431166 Cellulosimicrobium sp. 4261 Isolate Rhizosphere
24 2935409751 Agromyces sp. PvR057 Isolate Rhizosphere
25 2935890801 Oerskovia enterophila 3230 Isolate Rhizosphere
26 2939657138 Conyzicola nivalis 2857 Isolate Rhizosphere
27 2939743619 Rhodococcus sp. PvR044 Isolate Rhizosphere
28 2946033335 Microbacterium sp. W4I4 Isolate Rhizosphere
29 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
30 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
31 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
32 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
33 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
34 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
35 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
36 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
37 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
38 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
39 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
40 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
41 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
42 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
43 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
44 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
45 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
46 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
47 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
48 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
49 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
51 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
56 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
57 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
58 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
59 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
60 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
61 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
62 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
63 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
64 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
65 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
66 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
67 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
68 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
69 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
70 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
71 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
72 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
73 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
74 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
75 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
76 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
77 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
78 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
79 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
80 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
81 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
82 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
83 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
84 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
85 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
86 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
87 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
88 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
89 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
90 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
91 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
92 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
93 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
94 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
95 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
96 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
97 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
98 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
99 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
100 8055037949 Leucobacter rhizosphaerae H25R-14 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 73.95
Metatranscriptomes 1.68
Isolates 24.37

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 26.89
Nodule 0
Rhizoplane 5.88
Rhizosphere 45.38
Stem 0
Stem Tuber 0.84
Unclassified 21.01

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25164J39214_1000448 3300002772 Bacteria 21527
2 JGI25165J46597_1000002 3300003214 Bacteria 765387
3 Ga0006562J51391_1132775 3300003578 Bacteria 8210
4 Ga0055539_1000035 3300003752 Bacteria 217588
5 Ga0055533_1000001 3300003756 Bacteria 1863437
6 Ga0055525_1000305 3300003759 Bacteria 40250
7 Ga0055527_1000012 3300003760 Bacteria 348744
8 Ga0055542_1000017 3300003762 Bacteria 348744
9 Ga0055529_1000023 3300003763 Bacteria 314383
10 Ga0070658_10000282 3300005327 Bacteria 44669
11 Ga0068855_100042615 3300005563 Bacteria 5377
12 Ga0105243_10006446 3300009148 Bacteria 9071
13 Ga0206353_10077801 3300020082 Bacteria 3207
14 Ga0209566_100078 3300025225 Bacteria 158974
15 Ga0209674_100001 3300025226 Bacteria 4013750
16 Ga0209672_100003 3300025228 Bacteria 1560476
17 Ga0209147_100254 3300025229 Bacteria 50515
18 Ga0209563_100001 3300025230 Bacteria 4013775
19 Ga0209563_100283 3300025230 Bacteria 21235
20 Ga0207427_100034 3300025231 Bacteria 320342
21 Ga0209677_100001 3300025253 Bacteria 4013787
22 Ga0209677_100726 3300025253 Bacteria 16785
23 Ga0209148_1000004 3300025254 Bacteria 1844481
24 Ga0209233_1000001 3300025261 Bacteria 2992747
25 Ga0209455_1000022 3300025272 Bacteria 688910
26 Ga0209455_1002529 3300025272 Bacteria 7008
27 Ga0207705_10000001 3300025909 Bacteria 2061880
28 Ga0207709_10000800 3300025935 Bacteria 24479
29 Ga0207667_10030214 3300025949 Bacteria 5864
30 Ga0307515_10119976 3300028794 Bacteria 2987
31 Ga0307515_10121193 3300028794 Bacteria 2961
32 Ga0316576_10000786 3300031727 Bacteria 15940
33 Ga0316574_0000223 3300035398 Bacteria 20282
34 Ga0395899_0024712 3300037312 Bacteria 4541
35 Ga0395899_0026339 3300037312 Bacteria 4388
36 Ga0395900_0003247 3300037418 Bacteria 17599
37 Ga0395898_0000273 3300037466 Bacteria 126023
38 Ga0466972_0043510 3300044658 Bacteria 2181
39 Ga0466965_0064227 3300044683 Bacteria 1837
40 Ga0466961_0058294 3300044693 Bacteria 2457
41 Ga0466961_0077443 3300044693 Bacteria 2106
42 Ga0466970_0013848 3300044765 Bacteria 4137
43 Ga0466970_0074574 3300044765 Bacteria 1826
44 Ga0466957_0053418 3300044842 Bacteria 2463
45 Ga0466959_0011828 3300045049 Bacteria 6283
46 Ga0495590_0000102 3300046457 Bacteria 51553
47 Ga0495672_0017402 3300047320 Bacteria 4809
48 Ga0496102_0031267 3300048905 Bacteria 4774
49 Ga0496104_0087213 3300048907 Bacteria 2980
50 Ga0496105_0013209 3300048908 Bacteria 6552
51 Ga0496105_0015507 3300048908 Bacteria 6075
52 Ga0496114_0073600 3300048917 Bacteria 2875
53 Ga0496115_0038916 3300048918 Bacteria 3776
54 Ga0496115_0052535 3300048918 Bacteria 3269
55 Ga0496117_0004652 3300048920 Bacteria 14930
56 Ga0496118_0018824 3300048921 Bacteria 6200
57 Ga0496119_0029165 3300048922 Bacteria 3749
58 Ga0496121_0139501 3300048924 Bacteria 1801
59 Ga0496122_0002317 3300048925 Bacteria 27486
60 Ga0496123_0020171 3300048926 Bacteria 5223
61 Ga0496126_0009249 3300048929 Bacteria 10502
62 Ga0496126_0019425 3300048929 Bacteria 6691
63 Ga0496126_0076390 3300048929 Bacteria 2971
64 Ga0501033_0005755 3300049570 Bacteria 9763
65 Ga0501034_0008748 3300049571 Bacteria 10655
66 Ga0501034_0206027 3300049571 Bacteria 1923
67 Ga0501034_0293462 3300049571 Bacteria 1563
68 Ga0501038_0050994 3300049574 Bacteria 3574
69 Ga0501046_0005730 3300049580 Bacteria 11084
70 Ga0501070_0014769 3300049586 Bacteria 6570
71 Ga0501070_0026884 3300049586 Bacteria 4826
72 Ga0501071_0003877 3300049587 Bacteria 9423
73 Ga0501073_0000015 3300049589 Bacteria 157300
74 Ga0501073_0021455 3300049589 Bacteria 4657
75 Ga0501079_0077405 3300049741 Bacteria 2573
76 Ga0501080_0000056 3300049742 Bacteria 72834
77 Ga0501080_0034509 3300049742 Bacteria 4724
78 Ga0501083_0009638 3300049744 Bacteria 6824
79 Ga0501035_0040934 3300049822 Bacteria 4185
80 nmdc:mga0yw44_20667_c1 3300050492 Bacteria 3658
81 Ga0500635_0000472 3300053080 Bacteria 11439
82 Ga0500556_0000163 3300053104 Bacteria 54246
83 Ga0500562_002022 3300053108 Bacteria 5079
84 Ga0500593_005054 3300053117 Bacteria 5161
85 Ga0500655_000608 3300053133 Bacteria 7206
86 Ga0500559_0000083 3300053136 Bacteria 74324
87 Ga0500559_0000124 3300053136 Bacteria 59992
88 Ga0500559_0055205 3300053136 Bacteria 1761
89 Ga0500573_0000018 3300053140 Bacteria 177945
90 Ga0500573_0004899 3300053140 Bacteria 7097

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049571 Ga0501034_0206027 Ga0501034_0206027_675_1880 397
2 3300048929 Ga0496126_0009249 Ga0496126_0009249_4613_6235 432
3 3300049571 Ga0501034_0293462 Ga0501034_0293462_98_1471 451
4 3300031727 Ga0316576_10000786 Ga0316576_100007865 453
5 3300035398 Ga0316574_0000223 Ga0316574_0000223_16886_18349 453
6 3300048905 Ga0496102_0031267 Ga0496102_0031267_17_1420 454
7 3300049587 Ga0501071_0003877 Ga0501071_0003877_726_2300 457
8 3300049744 Ga0501083_0009638 Ga0501083_0009638_5245_6711 461
9 iso_pu_bacteria 2643221690 2644503845 461
10 iso_pu_bacteria 2884994152 2884995525 462
11 iso_pu_bacteria 2887443736 2887446501 463
12 3300044693 Ga0466961_0077443 Ga0466961_0077443_615_2087 465
13 3300047320 Ga0495672_0017402 Ga0495672_0017402_943_2364 469
14 3300049589 Ga0501073_0021455 Ga0501073_0021455_231_1658 469
15 3300049741 Ga0501079_0077405 Ga0501079_0077405_1022_2449 469
16 3300049589 Ga0501073_0000015 Ga0501073_0000015_119135_120574 470
17 3300053140 Ga0500573_0004899 Ga0500573_0004899_4551_5966 471
18 3300050492 nmdc:mga0yw44_20667_c1 nmdc:mga0yw44_20667_c1_1136_2569 473
19 3300028794 Ga0307515_10119976 Ga0307515_101199761 474
20 3300049586 Ga0501070_0014769 Ga0501070_0014769_1382_2821 475
21 3300049742 Ga0501080_0034509 Ga0501080_0034509_2870_4309 475
22 3300053104 Ga0500556_0000163 Ga0500556_0000163_23254_24699 475
23 3300053108 Ga0500562_002022 Ga0500562_002022_2176_3618 475
24 3300053117 Ga0500593_005054 Ga0500593_005054_1000_2445 475
25 3300053133 Ga0500655_000608 Ga0500655_000608_5242_6687 475
26 3300053136 Ga0500559_0000083 Ga0500559_0000083_933_2375 475
27 3300028794 Ga0307515_10121193 Ga0307515_101211931 476
28 3300049571 Ga0501034_0008748 Ga0501034_0008748_1729_3180 476
29 3300049574 Ga0501038_0050994 Ga0501038_0050994_633_2081 476
30 3300053136 Ga0500559_0055205 Ga0500559_0055205_22_1452 476
31 iso_pu_bacteria 2857737099 2857738118 476
32 3300053140 Ga0500573_0000018 Ga0500573_0000018_99177_100619 477
33 iso_pu_bacteria 2852643534 2852644896 477
34 3300046457 Ga0495590_0000102 Ga0495590_0000102_13034_14503 478
35 3300049586 Ga0501070_0026884 Ga0501070_0026884_1819_3285 478
36 3300049742 Ga0501080_0000056 Ga0501080_0000056_43756_45222 478
37 iso_pu_bacteria 2946033335 2946034686 478
38 iso_pu_bacteria 8055037949 8055040767 478
39 3300053136 Ga0500559_0000124 Ga0500559_0000124_26841_28286 479
40 3300048925 Ga0496122_0002317 Ga0496122_0002317_25402_26907 480
41 3300048926 Ga0496123_0020171 Ga0496123_0020171_718_2223 480
42 iso_pu_bacteria 2738543011 2739239082 480
43 iso_pu_bacteria 2889300758 2889304036 480
44 iso_pu_bacteria 2939657138 2939657221 480
45 iso_pu_bacteria 2939743619 2939745570 480
46 3300048907 Ga0496104_0087213 Ga0496104_0087213_264_1748 481
47 3300048917 Ga0496114_0073600 Ga0496114_0073600_363_1847 481
48 3300048918 Ga0496115_0052535 Ga0496115_0052535_866_2350 481
49 3300048924 Ga0496121_0139501 Ga0496121_0139501_33_1517 481
50 3300048929 Ga0496126_0019425 Ga0496126_0019425_4095_5579 481
51 iso_pu_bacteria 2857733635 2857736590 481
52 3300009148 Ga0105243_10006446 Ga0105243_100064464 483
53 3300025935 Ga0207709_10000800 Ga0207709_1000080018 483
54 3300049570 Ga0501033_0005755 Ga0501033_0005755_4148_5605 485
55 3300049580 Ga0501046_0005730 Ga0501046_0005730_5626_7083 485
56 3300049822 Ga0501035_0040934 Ga0501035_0040934_126_1583 485
57 iso_pu_bacteria 2643221632 2644182873 486
58 iso_pu_bacteria 2585428094 2587863055 488
59 iso_pu_bacteria 2721755702 2723641558 488
60 iso_pu_bacteria 2919523602 2919523947 488
61 iso_pu_bacteria 2935409751 2935410981 488
62 3300003760 Ga0055527_1000012 Ga0055527_100001245 489
63 3300003762 Ga0055542_1000017 Ga0055542_100001745 489
64 3300003763 Ga0055529_1000023 Ga0055529_100002313 489
65 3300005327 Ga0070658_10000282 Ga0070658_1000028224 489
66 3300005563 Ga0068855_100042615 Ga0068855_1000426152 489
67 3300025228 Ga0209672_100003 Ga0209672_100003300 489
68 3300025229 Ga0209147_100254 Ga0209147_10025424 489
69 3300025254 Ga0209148_1000004 Ga0209148_1000004595 489
70 3300025272 Ga0209455_1000022 Ga0209455_1000022389 489
71 3300025909 Ga0207705_10000001 Ga0207705_10000001109 489
72 3300025949 Ga0207667_10030214 Ga0207667_100302142 489
73 3300037312 Ga0395899_0026339 Ga0395899_0026339_599_2068 489
74 3300037418 Ga0395900_0003247 Ga0395900_0003247_7196_8665 489
75 3300037466 Ga0395898_0000273 Ga0395898_0000273_108963_110432 489
76 3300048908 Ga0496105_0013209 Ga0496105_0013209_3284_4768 489
77 3300048922 Ga0496119_0029165 Ga0496119_0029165_985_2469 489
78 3300048929 Ga0496126_0076390 Ga0496126_0076390_1162_2631 489
79 iso_pu_bacteria 2643221649 2644277424 489
80 iso_pu_bacteria 2844841374 2844841895 489
81 iso_pu_bacteria 2919055335 2919057534 489
82 iso_pu_bacteria 2928153084 2928155901 489
83 3300003752 Ga0055539_1000035 Ga0055539_1000035111 491
84 3300003756 Ga0055533_1000001 Ga0055533_1000001237 491
85 3300003759 Ga0055525_1000305 Ga0055525_100030513 491
86 3300020082 Ga0206353_10077801 Ga0206353_100778012 491
87 3300025225 Ga0209566_100078 Ga0209566_100078136 491
88 3300025226 Ga0209674_100001 Ga0209674_100001238 491
89 3300025230 Ga0209563_100001 Ga0209563_100001238 491
90 3300025230 Ga0209563_100283 Ga0209563_10028313 491
91 3300025253 Ga0209677_100001 Ga0209677_100001238 491
92 3300025253 Ga0209677_100726 Ga0209677_10072610 491
93 3300037312 Ga0395899_0024712 Ga0395899_0024712_63_1592 491
94 3300048921 Ga0496118_0018824 Ga0496118_0018824_3385_4860 491
95 3300044658 Ga0466972_0043510 Ga0466972_0043510_566_2074 492
96 3300044683 Ga0466965_0064227 Ga0466965_0064227_305_1807 492
97 3300044765 Ga0466970_0074574 Ga0466970_0074574_309_1811 492
98 iso_pu_bacteria 2643221549 2643769676 492
99 3300003578 Ga0006562J51391_1132775 Ga0006562J51391_11327752 493
100 3300025272 Ga0209455_1002529 Ga0209455_10025292 493
101 3300044693 Ga0466961_0058294 Ga0466961_0058294_202_1686 493
102 3300044765 Ga0466970_0013848 Ga0466970_0013848_2552_4036 493
103 3300044842 Ga0466957_0053418 Ga0466957_0053418_277_1761 493
104 3300045049 Ga0466959_0011828 Ga0466959_0011828_1751_3235 493
105 3300048920 Ga0496117_0004652 Ga0496117_0004652_5484_6983 493
106 iso_pu_bacteria 2643221616 2644095504 493
107 iso_pu_bacteria 2884763398 2884764885 493
108 iso_pu_bacteria 2643221613 2644082897 494
109 iso_pu_bacteria 2643221721 2644665854 494
110 iso_pu_bacteria 2839986021 2839987775 494
111 iso_pu_bacteria 2935890801 2935893184 494
112 3300048908 Ga0496105_0015507 Ga0496105_0015507_2007_3500 495
113 3300048918 Ga0496115_0038916 Ga0496115_0038916_1819_3312 495
114 3300053080 Ga0500635_0000472 Ga0500635_0000472_715_2205 496
115 3300002772 JGI25164J39214_1000448 JGI25164J39214_100044814 497
116 3300003214 JGI25165J46597_1000002 JGI25165J46597_1000002173 497
117 3300025231 Ga0207427_100034 Ga0207427_100034101 497
118 3300025261 Ga0209233_1000001 Ga0209233_10000012632 497
119 iso_pu_bacteria 2932431166 2932434168 497

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00282

Pyridoxal_deC

Pyridoxal-dependent decarboxylase conserved domain

57

362

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
8ayf-assembly1.cif.gz_B crystal structure of human sphingosine-1-phosphate lyase 1 0.9337 2 418
3maf-assembly1.cif.gz_B crystal structure of stspl (asymmetric form) 0.918 2 415
5k1r-assembly1.cif.gz_B structure of burkholderia pseudomallei k96243 sphingosine-1-phosphate lyase bpss2021 0.9138 2 409
5k1r-assembly1.cif.gz_A structure of burkholderia pseudomallei k96243 sphingosine-1-phosphate lyase bpss2021 0.9135 2 409
3maf-assembly1.cif.gz_A crystal structure of stspl (asymmetric form) 0.9123 2 432
ID Description Score Start End Superfamily
af_O95470_156_412_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.959 41 298 3.40.640.10
af_Q966E7_153_405_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9589 43 295 3.40.640.10
af_A0A1D8PJQ9_166_429_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.958 32 292 3.40.640.10
af_O95470_156_412_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9517 41 298 3.40.640.10
af_Q966E7_153_405_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9479 43 295 3.40.640.10
ID Description Score Start End GO Terms
AF-A0A3N7IRW4-F1-model_v4 Aspartate aminotransferase family protein 0.9784 2 494 GO:0008483
GO:0016831
GO:0019752
GO:0030170
AF-A0A3N7IRW4-F1-model_v4 Aspartate aminotransferase family protein 0.9744 2 494 GO:0008483
GO:0016831
GO:0019752
GO:0030170
AF-A0A521X249-F1-model_v4 Aspartate aminotransferase family protein 0.9624 2 409 GO:0008117
GO:0008483
GO:0016020
GO:0016831
GO:0019752
GO:0030149
GO:0030170
AF-A0A6N9XQZ0-F1-model_v4 deleted 0.9584 85 410
AF-A0A7W1VU47-F1-model_v4 Aspartate aminotransferase family protein 0.9572 2 410 GO:0008117
GO:0008483
GO:0016020
GO:0016831
GO:0019752
GO:0030149
GO:0030170

Feature Viewer

pLDDT pTM Quality
90.23 0.91 High
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Predicted Structure (AlphaFold2)

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