F099466
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 118 | 111 | 236 | 703 |
Family's Representative Sequence
| Representative Sequence | iso_pu_bacteria|2855386786|2855390077 |
| Length | 794 |
| Sequence | HPAVVDLSGGDIVLVLVVALISLGALAMAVMFRQEVLAADEGTENMKNIAHAVQEGANAYLTRQFRTLGVFAAIAFFALLALPADDALLRIFRSVFFLVGAGFSASIGYLGMWLAVRANLRVAAAATSTGRDPAMNVAFRTGAFVGMATVGLGLLGASMVVLFFQGDAPVVLEGFGFGAALLAMFMRVGGGIFTKAADVGADLVGKVEQGIPEDDPRNAATIADNVGDNVGDCAGMAADLFESYAVTLVAALILGSQAFGEAGLVFPLLVPAIGALTAVAGVYLTRPRPGENGLKTINRAFYISAGVGAVATTILSFVYLPTSFDELEGAGRSALDSAFGYSAPDGNPALIAAVAVIIGIVLAAAILALTGYYTGTEHEPVKGVGRTSLTGAATVILSGLSVGFESAVYTTLVIGAAVFGAFLLGGGSLSIALFAVALAGCGLLTTVGVIVAMDTFGPVSDNAQGIAEMSGDISPEGAQILTELDAVGNTTKAVTKGIAIATAVLAASALFGSYIGTALDEITEARPGRDETISFFVFSPDVLVGLLIGVAVVFLFSGLAINAVGRAAGAVVYEVRRQFREIPGIMDGTGRPEYGKVVDIVTRDSLRELSTPGILAILSPIAVGFGLGVGPLAGFLAGAIGAGTLMAVFLANSGGAWDNAKKLVEDGNHGGKGSEAHAATVIGDTVGDPFKDTAGPAINPLLKVMNLVSLLIVGAVVSLTVGEDSNRPVSILIALLAFAGIVIAVIISKRREHVLHDEPGDPASPPPVPPASDPTPFHTPSDGPVDERGAQHTP |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300003203 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 2 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 3 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 4 | 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Metagenome | Rhizosphere |
| 5 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 6 | 3300005437 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG | Metagenome | Rhizosphere |
| 7 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 10 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 11 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 12 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 13 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 14 | 3300006042 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 | Metagenome | Endosphere |
| 15 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 16 | 3300006353 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 | Metagenome | Endosphere |
| 17 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 18 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 19 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 20 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 21 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 22 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 23 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 24 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 25 | 3300021388 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 | Metagenome | Unclassified |
| 26 | 3300025898 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 27 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 28 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 29 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 30 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 31 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 32 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 33 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 34 | 3300027866 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) | Metagenome | Endosphere |
| 35 | 3300030521 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM | Metagenome | Unclassified |
| 36 | 3300030732 | Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 | Metagenome | Rhizosphere |
| 37 | 3300030733 | Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 | Metagenome | Rhizosphere |
| 38 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 39 | 3300031691 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA | Metagenome | Rhizosphere |
| 40 | 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Metagenome | Rhizosphere |
| 41 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 42 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 43 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 44 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 45 | 3300033179 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM | Metagenome | Unclassified |
| 46 | 3300035119 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 | Metagenome | Rhizosphere |
| 47 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 48 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 49 | 3300041452 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG | Metagenome | Rhizoplane |
| 50 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 51 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 52 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 53 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 54 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 55 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 56 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 57 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 58 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 59 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 60 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 61 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 62 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 63 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 64 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 65 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 66 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 67 | 3300049578 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 68 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 69 | 3300049583 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 | Metagenome | Rhizosphere |
| 70 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 71 | 3300049587 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 | Metagenome | Rhizosphere |
| 72 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 73 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 74 | 3300049592 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 | Metagenome | Rhizosphere |
| 75 | 3300049593 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 | Metagenome | Rhizosphere |
| 76 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 77 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 78 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 79 | 3300050490 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation | Metagenome | Endosphere |
| 80 | 3300050492 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation | Metagenome | Endosphere |
| 81 | 3300050494 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation | Metagenome | Endosphere |
| 82 | 3300050496 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation | Metagenome | Endosphere |
| 83 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 84 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 85 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 86 | 3300053088 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere | Metagenome | Endosphere |
| 87 | 3300053104 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere | Metagenome | Endosphere |
| 88 | 3300053142 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere | Metagenome | Endosphere |
| 89 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 90 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 91 | 2855386786 | Nocardioides ferulae EGI 63112 | Isolate | Unclassified |
| 92 | 2558860112 | Pseudonocardia acaciae DSM 45401 | Isolate | Unclassified |
| 93 | 2558860280 | Kutzneria sp. 744 | Isolate | Unclassified |
| 94 | 2643221561 | Nocardioides sp. Root151 | Isolate | Unclassified |
| 95 | 2643221615 | Nocardioides sp. Root224 | Isolate | Unclassified |
| 96 | 2643221641 | Nocardioides sp. Root122 | Isolate | Unclassified |
| 97 | 2643221657 | Nocardioides sp. Root1257 | Isolate | Unclassified |
| 98 | 2643221696 | Nocardioides sp. Root140 | Isolate | Unclassified |
| 99 | 2675903059 | Asanoa hainanensis CGMCC 4.5593 | Isolate | Rhizosphere |
| 100 | 2739367898 | Nocardioides sp. CF479 | Isolate | Unclassified |
| 101 | 2751185734 | Saccharothrix sp. NRRL B-16314 | Isolate | Rhizosphere |
| 102 | 2791354901 | Actinophytocola xanthii 11-183 | Isolate | Rhizosphere |
| 103 | 2795385470 | Labedaea rhizosphaerae DSM 45361 | Isolate | Rhizosphere |
| 104 | 2795385472 | Herbihabitans rhizosphaerae DSM 101727 | Isolate | Rhizosphere |
| 105 | 2816332119 | Kribbella amoyensis DSM 24683 | Isolate | Rhizosphere |
| 106 | 2816332139 | Pseudonocardia kunmingensis DSM 45301 | Isolate | Unclassified |
| 107 | 2857481737 | Nocardioides sp. R-74106 | Isolate | Unclassified |
| 108 | 2891326441 | Actinokineospora pegani TRM65233 | Isolate | Unclassified |
| 109 | 2899370129 | Amycolatopsis alkalitolerans SYSUP0005 | Isolate | Stem Tuber |
| 110 | 2915358134 | Pseudonocardia pini CAP47R | Isolate | Unclassified |
| 111 | 8054609563 | Nocardioides astragali CGMCC 4.7327 | Isolate | Nodule |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 82.2 |
| Metatranscriptomes | 0 |
| Isolates | 17.8 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 9.32 |
| Nodule | 0.85 |
| Rhizoplane | 11.02 |
| Rhizosphere | 62.71 |
| Stem | 0 |
| Stem Tuber | 0.85 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI25406J46586_10000473 | 3300003203 | Bacteria | 18726 |
| 2 | Ga0070683_100006286 | 3300005329 | Bacteria | 9965 |
| 3 | Ga0070680_100062366 | 3300005336 | Bacteria | 3053 |
| 4 | Ga0070682_100003432 | 3300005337 | Bacteria | 8784 |
| 5 | Ga0070668_100004025 | 3300005347 | Bacteria | 10868 |
| 6 | Ga0070710_10001150 | 3300005437 | Bacteria | 12554 |
| 7 | Ga0070708_100077003 | 3300005445 | Bacteria | 3013 |
| 8 | Ga0070663_100007835 | 3300005455 | Bacteria | 6531 |
| 9 | Ga0070681_10041790 | 3300005458 | Bacteria | 4596 |
| 10 | Ga0070698_100001448 | 3300005471 | Bacteria | 26337 |
| 11 | Ga0070684_100001778 | 3300005535 | Bacteria | 15736 |
| 12 | Ga0068864_100036467 | 3300005618 | Bacteria | 4192 |
| 13 | Ga0081539_10000027 | 3300005985 | Bacteria | 328691 |
| 14 | Ga0075368_10007847 | 3300006042 | Bacteria | 3783 |
| 15 | Ga0075364_10001307 | 3300006051 | Bacteria | 13400 |
| 16 | Ga0075370_10002625 | 3300006353 | Bacteria | 8386 |
| 17 | Ga0075428_100005200 | 3300006844 | Bacteria | 14458 |
| 18 | Ga0075430_100002978 | 3300006846 | Bacteria | 14175 |
| 19 | Ga0105245_10007936 | 3300009098 | Bacteria | 9281 |
| 20 | Ga0114129_10004032 | 3300009147 | Bacteria | 20732 |
| 21 | Ga0105249_10039691 | 3300009553 | Bacteria | 4274 |
| 22 | Ga0105239_10002802 | 3300010375 | Bacteria | 21794 |
| 23 | Ga0105239_10009298 | 3300010375 | Bacteria | 11109 |
| 24 | Ga0157372_10007431 | 3300013307 | Bacteria | 11654 |
| 25 | Ga0163163_10043939 | 3300014325 | Bacteria | 4382 |
| 26 | Ga0213875_10000925 | 3300021388 | Bacteria | 21163 |
| 27 | Ga0207692_10000270 | 3300025898 | Bacteria | 17743 |
| 28 | Ga0207694_10010598 | 3300025924 | Bacteria | 6959 |
| 29 | Ga0207687_10028232 | 3300025927 | Bacteria | 3770 |
| 30 | Ga0207661_10006353 | 3300025944 | Bacteria | 8360 |
| 31 | Ga0207668_10006091 | 3300025972 | Bacteria | 7111 |
| 32 | Ga0207678_10000054 | 3300026067 | Bacteria | 87616 |
| 33 | Ga0207674_10007680 | 3300026116 | Bacteria | 12555 |
| 34 | Ga0207675_100027326 | 3300026118 | Bacteria | 5314 |
| 35 | Ga0209813_10001525 | 3300027866 | Bacteria | 5193 |
| 36 | Ga0307511_10000303 | 3300030521 | Bacteria | 52216 |
| 37 | Ga0316176_1058893 | 3300030732 | Bacteria | 8667 |
| 38 | Ga0314311_1013668 | 3300030733 | Bacteria | 8765 |
| 39 | Ga0307513_10038697 | 3300031456 | Bacteria | 5294 |
| 40 | Ga0316579_10000328 | 3300031691 | Bacteria | 14833 |
| 41 | Ga0307413_10000710 | 3300031824 | Bacteria | 11413 |
| 42 | Ga0307410_10028936 | 3300031852 | Bacteria | 3521 |
| 43 | Ga0307416_100002881 | 3300032002 | Bacteria | 10020 |
| 44 | Ga0307411_10005212 | 3300032005 | Bacteria | 6363 |
| 45 | Ga0307415_100003451 | 3300032126 | Bacteria | 8047 |
| 46 | Ga0307415_100007814 | 3300032126 | Bacteria | 5876 |
| 47 | Ga0307507_10030089 | 3300033179 | Bacteria | 5735 |
| 48 | Ga0373956_0000563 | 3300035119 | Bacteria | 15213 |
| 49 | Ga0395900_0055251 | 3300037418 | Bacteria | 4089 |
| 50 | Ga0436364_0836381 | 3300037853 | Bacteria | 34828 |
| 51 | Ga0451793_0220882 | 3300041452 | Bacteria | 5491 |
| 52 | Ga0466965_0004282 | 3300044683 | Bacteria | 6342 |
| 53 | Ga0466960_0005160 | 3300044901 | Bacteria | 5163 |
| 54 | Ga0466960_0012255 | 3300044901 | Bacteria | 3612 |
| 55 | Ga0451576_0046672 | 3300045051 | Bacteria | 4561 |
| 56 | Ga0466958_0005678 | 3300045836 | Bacteria | 6741 |
| 57 | Ga0466967_0040051 | 3300045976 | Bacteria | 4032 |
| 58 | Ga0496101_0021655 | 3300048904 | Bacteria | 4417 |
| 59 | Ga0496102_0005198 | 3300048905 | Bacteria | 11050 |
| 60 | Ga0496102_0008637 | 3300048905 | Bacteria | 8742 |
| 61 | Ga0496105_0004195 | 3300048908 | Bacteria | 10822 |
| 62 | Ga0496106_0008319 | 3300048909 | Bacteria | 7677 |
| 63 | Ga0496108_0015475 | 3300048911 | Bacteria | 6223 |
| 64 | Ga0496108_0018852 | 3300048911 | Bacteria | 5658 |
| 65 | Ga0496109_0056472 | 3300048912 | Bacteria | 3582 |
| 66 | Ga0496110_0036101 | 3300048913 | Bacteria | 4291 |
| 67 | Ga0496110_0045890 | 3300048913 | Bacteria | 3821 |
| 68 | Ga0496111_0016124 | 3300048914 | Bacteria | 5146 |
| 69 | Ga0496114_0062579 | 3300048917 | Bacteria | 3114 |
| 70 | Ga0501031_0005016 | 3300049568 | Bacteria | 8608 |
| 71 | Ga0501036_0002529 | 3300049572 | Bacteria | 14358 |
| 72 | Ga0501039_0009657 | 3300049575 | Bacteria | 7356 |
| 73 | Ga0501042_0022365 | 3300049578 | Bacteria | 4417 |
| 74 | Ga0501048_0025475 | 3300049582 | Bacteria | 4310 |
| 75 | Ga0501067_0006519 | 3300049583 | Bacteria | 6472 |
| 76 | Ga0501070_0001374 | 3300049586 | Bacteria | 21761 |
| 77 | Ga0501070_0077274 | 3300049586 | Bacteria | 2755 |
| 78 | Ga0501071_0039679 | 3300049587 | Bacteria | 3368 |
| 79 | Ga0501072_0020558 | 3300049588 | Bacteria | 5116 |
| 80 | Ga0501074_0005493 | 3300049590 | Bacteria | 9118 |
| 81 | Ga0501076_0003185 | 3300049592 | Bacteria | 11450 |
| 82 | Ga0501077_0006715 | 3300049593 | Bacteria | 7078 |
| 83 | Ga0501080_0040700 | 3300049742 | Bacteria | 4334 |
| 84 | Ga0501035_0060411 | 3300049822 | Bacteria | 3374 |
| 85 | Ga0501045_0021410 | 3300049824 | Bacteria | 4625 |
| 86 | nmdc:mga03n38_927_c1 | 3300050490 | Bacteria | 7909 |
| 87 | nmdc:mga0yw44_11283_c1 | 3300050492 | Bacteria | 4606 |
| 88 | nmdc:mga06z11_15925_c1 | 3300050494 | Bacteria | 3371 |
| 89 | nmdc:mga07m45_2550_c1 | 3300050496 | Bacteria | 8559 |
| 90 | nmdc:mga05p37_48417_c1 | 3300050507 | Bacteria | 5228 |
| 91 | nmdc:mga0qj67_20254_c1 | 3300050509 | Bacteria | 5091 |
| 92 | nmdc:mga06r32_4564_c1 | 3300050510 | Bacteria | 12411 |
| 93 | Ga0500644_0000181 | 3300053088 | Bacteria | 40245 |
| 94 | Ga0500556_0001755 | 3300053104 | Bacteria | 8133 |
| 95 | Ga0500577_0004248 | 3300053142 | Bacteria | 3770 |
| 96 | Ga0501084_0061373 | 3300054114 | Bacteria | 3147 |
| 97 | Ga0501082_0006289 | 3300060353 | Bacteria | 10299 |
| 98 | 2855390077 | 2855386786 | Bacteria | 4752232 |
| 99 | 2558913861 | 2558860112 | Bacteria | 9931328 |
| 100 | 2559427635 | 2558860280 | Bacteria | 11429938 |
| 101 | 2643824833 | 2643221561 | Bacteria | 4984412 |
| 102 | 2644093269 | 2643221615 | Bacteria | 5487866 |
| 103 | 2644229466 | 2643221641 | Bacteria | 4490190 |
| 104 | 2644322880 | 2643221657 | Bacteria | 5490246 |
| 105 | 2644532616 | 2643221696 | Bacteria | 5431823 |
| 106 | 2676484100 | 2675903059 | Bacteria | 8644972 |
| 107 | 2740168483 | 2739367898 | Bacteria | 4367674 |
| 108 | 2753076579 | 2751185734 | Bacteria | 8863695 |
| 109 | 2791913795 | 2791354901 | Bacteria | 8322202 |
| 110 | 2795780416 | 2795385470 | Bacteria | 8317180 |
| 111 | 2795793855 | 2795385472 | Bacteria | 6627535 |
| 112 | 2816422833 | 2816332119 | Bacteria | 8120218 |
| 113 | 2816510047 | 2816332139 | Bacteria | 9138787 |
| 114 | 2857485149 | 2857481737 | Bacteria | 4761446 |
| 115 | 2891328415 | 2891326441 | Bacteria | 6439512 |
| 116 | 2899374516 | 2899370129 | Bacteria | 6781179 |
| 117 | 2915361667 | 2915358134 | Bacteria | 6050864 |
| 118 | 8054614155 | 8054609563 | Bacteria | 5170090 |
| 119 | JGI25406J46586_10000473 | |||
| 120 | Ga0070683_100006286 | |||
| 121 | Ga0070680_100062366 | |||
| 122 | Ga0070682_100003432 | |||
| 123 | Ga0070668_100004025 | |||
| 124 | Ga0070710_10001150 | |||
| 125 | Ga0070708_100077003 | |||
| 126 | Ga0070663_100007835 | |||
| 127 | Ga0070681_10041790 | |||
| 128 | Ga0070698_100001448 | |||
| 129 | Ga0070684_100001778 | |||
| 130 | Ga0068864_100036467 | |||
| 131 | Ga0081539_10000027 | |||
| 132 | Ga0075368_10007847 | |||
| 133 | Ga0075364_10001307 | |||
| 134 | Ga0075370_10002625 | |||
| 135 | Ga0075428_100005200 | |||
| 136 | Ga0075430_100002978 | |||
| 137 | Ga0105245_10007936 | |||
| 138 | Ga0114129_10004032 | |||
| 139 | Ga0105249_10039691 | |||
| 140 | Ga0105239_10002802 | |||
| 141 | Ga0105239_10009298 | |||
| 142 | Ga0157372_10007431 | |||
| 143 | Ga0163163_10043939 | |||
| 144 | Ga0213875_10000925 | |||
| 145 | Ga0207692_10000270 | |||
| 146 | Ga0207694_10010598 | |||
| 147 | Ga0207687_10028232 | |||
| 148 | Ga0207661_10006353 | |||
| 149 | Ga0207668_10006091 | |||
| 150 | Ga0207678_10000054 | |||
| 151 | Ga0207674_10007680 | |||
| 152 | Ga0207675_100027326 | |||
| 153 | Ga0209813_10001525 | |||
| 154 | Ga0307511_10000303 | |||
| 155 | Ga0316176_1058893 | |||
| 156 | Ga0314311_1013668 | |||
| 157 | Ga0307513_10038697 | |||
| 158 | Ga0316579_10000328 | |||
| 159 | Ga0307413_10000710 | |||
| 160 | Ga0307410_10028936 | |||
| 161 | Ga0307416_100002881 | |||
| 162 | Ga0307411_10005212 | |||
| 163 | Ga0307415_100003451 | |||
| 164 | Ga0307415_100007814 | |||
| 165 | Ga0307507_10030089 | |||
| 166 | Ga0373956_0000563 | |||
| 167 | Ga0395900_0055251 | |||
| 168 | Ga0436364_0836381 | |||
| 169 | Ga0451793_0220882 | |||
| 170 | Ga0466965_0004282 | |||
| 171 | Ga0466960_0005160 | |||
| 172 | Ga0466960_0012255 | |||
| 173 | Ga0451576_0046672 | |||
| 174 | Ga0466958_0005678 | |||
| 175 | Ga0466967_0040051 | |||
| 176 | Ga0496101_0021655 | |||
| 177 | Ga0496102_0005198 | |||
| 178 | Ga0496102_0008637 | |||
| 179 | Ga0496105_0004195 | |||
| 180 | Ga0496106_0008319 | |||
| 181 | Ga0496108_0015475 | |||
| 182 | Ga0496108_0018852 | |||
| 183 | Ga0496109_0056472 | |||
| 184 | Ga0496110_0036101 | |||
| 185 | Ga0496110_0045890 | |||
| 186 | Ga0496111_0016124 | |||
| 187 | Ga0496114_0062579 | |||
| 188 | Ga0501031_0005016 | |||
| 189 | Ga0501036_0002529 | |||
| 190 | Ga0501039_0009657 | |||
| 191 | Ga0501042_0022365 | |||
| 192 | Ga0501048_0025475 | |||
| 193 | Ga0501067_0006519 | |||
| 194 | Ga0501070_0001374 | |||
| 195 | Ga0501070_0077274 | |||
| 196 | Ga0501071_0039679 | |||
| 197 | Ga0501072_0020558 | |||
| 198 | Ga0501074_0005493 | |||
| 199 | Ga0501076_0003185 | |||
| 200 | Ga0501077_0006715 | |||
| 201 | Ga0501080_0040700 | |||
| 202 | Ga0501035_0060411 | |||
| 203 | Ga0501045_0021410 | |||
| 204 | nmdc:mga03n38_927_c1 | |||
| 205 | nmdc:mga0yw44_11283_c1 | |||
| 206 | nmdc:mga06z11_15925_c1 | |||
| 207 | nmdc:mga07m45_2550_c1 | |||
| 208 | nmdc:mga05p37_48417_c1 | |||
| 209 | nmdc:mga0qj67_20254_c1 | |||
| 210 | nmdc:mga06r32_4564_c1 | |||
| 211 | Ga0500644_0000181 | |||
| 212 | Ga0500556_0001755 | |||
| 213 | Ga0500577_0004248 | |||
| 214 | Ga0501084_0061373 | |||
| 215 | Ga0501082_0006289 | |||
| 216 | 2855390077 | |||
| 217 | 2558913861 | |||
| 218 | 2559427635 | |||
| 219 | 2643824833 | |||
| 220 | 2644093269 | |||
| 221 | 2644229466 | |||
| 222 | 2644322880 | |||
| 223 | 2644532616 | |||
| 224 | 2676484100 | |||
| 225 | 2740168483 | |||
| 226 | 2753076579 | |||
| 227 | 2791913795 | |||
| 228 | 2795780416 | |||
| 229 | 2795793855 | |||
| 230 | 2816422833 | |||
| 231 | 2816510047 | |||
| 232 | 2857485149 | |||
| 233 | 2891328415 | |||
| 234 | 2899374516 | |||
| 235 | 2915361667 | |||
| 236 | 8054614155 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 6afu-assembly1.cif.gz_A | proton pyrophosphatase-l555m mutant | 0.8453 | 21 | 625 |
| 6aft-assembly1.cif.gz_A | proton pyrophosphatase - e301q | 0.8342 | 21 | 625 |
| 6afs-assembly1.cif.gz_A | proton pyrophosphatase - two phosphates-bound | 0.8319 | 21 | 625 |
| 6qxa-assembly2.cif.gz_D | structure of membrane bound pyrophosphatase from thermotoga maritima in complex with imidodiphosphate and n-[(2-amino-6-benzothiazolyl)methyl]-1h-indole-2-carboxamide (atc) | 0.825 | 21 | 625 |
| 5gpj-assembly1.cif.gz_A | crystal structure of proton-pumping pyrophosphatase | 0.8238 | 21 | 625 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_A0A0R4IM47_32_299_1.20.1270.60 | Mainly Alpha;Up-down Bundle;Substrate Binding Domain Of Dnak; Chain:A; Domain 2;Arfaptin homology (AH) domain/BAR domain | 0.2791 | 332 | 644 | 1.20.1270.60 |
| af_Q9W509_423_624_1.20.1250.20 | Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains | 0.2702 | 492 | 646 | 1.20.1250.20 |
| af_A0A0R4IM47_32_299_1.20.1270.60 | Mainly Alpha;Up-down Bundle;Substrate Binding Domain Of Dnak; Chain:A; Domain 2;Arfaptin homology (AH) domain/BAR domain | 0.2663 | 332 | 644 | 1.20.1270.60 |
| af_F4KIL8_42_442_1.20.1250.20 | Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains | 0.255 | 169 | 624 | 1.20.1250.20 |
| af_A0A0R4J5Z6_1_230_1.20.120.1770 | Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A); | 0.2544 | 189 | 426 | 1.20.120.1770 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A6B3I0W0-F1-model_v4 | Sodium-translocating pyrophosphatase | 0.9268 | 105 | 413 |
GO:0004427
GO:0009678 GO:0012505 GO:0016020 |
| AF-A0A0R2QMQ7-F1-model_v4 | Potassium transporter | 0.9165 | 21 | 625 |
GO:0004427
GO:0009678 GO:0012505 GO:0016020 |
| AF-A0A7K1BEI4-F1-model_v4 | Sodium-translocating pyrophosphatase | 0.9162 | 21 | 453 |
GO:0004427
GO:0009678 GO:0012505 GO:0016020 |
| AF-A0A6J7QJK9-F1-model_v4 | Unannotated protein | 0.9081 | 75 | 625 |
GO:0004427
GO:0009678 GO:0012505 GO:0016020 |
| AF-A0A3D3ZFZ1-F1-model_v4 | deleted | 0.9075 | 235 | 625 |
|