F098645

General Info

Members Datasets Scaffolds Average Seq Length
118 100 105 297

Family's Representative Sequence

Representative Sequence 3300046499|Ga0495594_0090898|Ga0495594_0090898_254_1228
Length 324
Sequence MPTLRRHSRPPGPKSNDAHMASLNPGTGRMHAGEVDIDGALVERLIAGQFPHWAELAIEPVPSAGTDNALYRLGDDLVVRLPRIRGATGQAALEQEWLPRLAPLLPLVIPAPLALGAPAEGYPWSWSVYRWLDGEAATIDRLTDPRQAAIALGAFVAALRRVPSGGWPSPAPSSPRGRPLATRDAAVRDAIAALSRAFDAGQLTAAWETALRAPPWRGAPMWLHGDLHATNLLARHGRLSAVIDFGCLGVGDPACDLMPAWIYLTADTREAFRDAAACDDAAWARGRGWALSVGLIALPYYETSNPVFAGIARHAIAEALADDG

Samples

Sample ID Description Type Environment
1 2162886012 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v1 Metagenome Rhizosphere
2 2524614857 Deinococcus ficus DSM 19119 Isolate Rhizosphere
3 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
4 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
5 2739367875 Deinococcus ficus CC-FR2-10 Isolate Unclassified
6 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
7 2808606448 Streptomyces sp. 193411 Isolate Unclassified
8 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
9 2895880812 Frankia sp. BMG5.11 Isolate Unclassified
10 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified
11 2904755435 Paenibacillus aceris KACC 19194 Isolate Rhizosphere
12 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
13 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
14 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
15 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
16 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
17 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
20 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
21 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
22 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
23 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
24 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
25 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
26 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
27 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
28 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
29 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
30 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
31 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
32 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
33 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
34 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
35 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
36 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
37 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
40 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
41 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
42 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
43 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
44 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
45 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
55 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
56 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
57 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
58 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
59 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
60 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
61 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
62 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
63 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
64 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
65 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
66 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
67 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
68 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
69 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
70 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
71 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
72 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
73 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
74 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
75 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
76 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
77 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
78 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
79 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
80 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
81 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
82 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
83 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
84 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
85 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
86 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
87 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
88 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
89 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
90 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
91 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
92 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
93 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
94 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
95 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
96 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
97 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
98 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
99 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
100 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 87.29
Metatranscriptomes 1.69
Isolates 11.02

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.39
Nodule 0
Rhizoplane 1.69
Rhizosphere 83.05
Stem 0
Stem Tuber 0
Unclassified 11.86

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 MBSR1b_contig_12915618 2162886012 Bacteria 1928
2 rootH1_10206213 3300003323 Bacteria 4297
3 Ga0070682_100051761 3300005337 Bacteria 2568
4 Ga0070714_100093460 3300005435 Bacteria 2637
5 Ga0070713_100459606 3300005436 Bacteria 1197
6 Ga0070708_100044680 3300005445 Bacteria 3897
7 Ga0070681_10053542 3300005458 Bacteria 4022
8 Ga0070706_100004464 3300005467 Bacteria 13512
9 Ga0070706_100226196 3300005467 Bacteria 1746
10 Ga0070707_100000709 3300005468 Bacteria 33233
11 Ga0070698_100014261 3300005471 Bacteria 8403
12 Ga0070698_100097550 3300005471 Bacteria 2915
13 Ga0070679_100075714 3300005530 Bacteria 3355
14 Ga0070697_100139946 3300005536 Bacteria 2035
15 Ga0070697_100183171 3300005536 Bacteria 1776
16 Ga0068864_100025634 3300005618 Bacteria 4968
17 Ga0068862_100097411 3300005844 Bacteria 2568
18 Ga0081455_10012352 3300005937 Bacteria 8520
19 Ga0081455_10016488 3300005937 Bacteria 7130
20 Ga0081538_10000078 3300005981 Bacteria 92826
21 Ga0081540_1011670 3300005983 Bacteria 5855
22 Ga0070717_10025998 3300006028 Bacteria 4666
23 Ga0070717_10084891 3300006028 Bacteria 2664
24 Ga0070712_100011298 3300006175 Bacteria 5657
25 Ga0075428_100111976 3300006844 Bacteria 2973
26 Ga0075428_100115147 3300006844 Bacteria 2928
27 Ga0075431_100029283 3300006847 Bacteria 5666
28 Ga0075431_100298363 3300006847 Bacteria 1628
29 Ga0075434_100195875 3300006871 Bacteria 2040
30 Ga0075435_100063766 3300007076 Bacteria 2993
31 Ga0105240_10770987 3300009093 Bacteria 1044
32 Ga0111539_10337773 3300009094 Bacteria 1753
33 Ga0114129_10009155 3300009147 Bacteria 14117
34 Ga0114129_10081804 3300009147 Bacteria 4489
35 Ga0114129_10166381 3300009147 Plasmid 3009
36 Ga0105239_10014424 3300010375 Bacteria 8770
37 Ga0105239_10129619 3300010375 Bacteria 2804
38 Ga0163163_10478793 3300014325 Bacteria 1306
39 Ga0206354_10538349 3300020081 Bacteria 1600
40 Ga0206353_11060231 3300020082 Bacteria 3996
41 Ga0209566_100799 3300025225 Bacteria 16529
42 Ga0207426_1000877 3300025302 Bacteria 31114
43 Ga0207684_10002809 3300025910 Bacteria 17303
44 Ga0207693_10006899 3300025915 Bacteria 9379
45 Ga0207693_10048136 3300025915 Bacteria 3348
46 Ga0207663_10231574 3300025916 Bacteria 1350
47 Ga0207660_10020401 3300025917 Bacteria 4446
48 Ga0207652_10086830 3300025921 Bacteria 2743
49 Ga0207646_10001240 3300025922 Bacteria 31982
50 Ga0207700_10136046 3300025928 Bacteria 2013
51 Ga0207664_10024782 3300025929 Bacteria 4512
52 Ga0207641_10035497 3300026088 Bacteria 4154
53 Ga0307517_10066161 3300028786 Bacteria 3331
54 Ga0307514_10197106 3300031649 Bacteria 1272
55 Ga0307406_10104171 3300031901 Bacteria 1939
56 Ga0307415_100006066 3300032126 Bacteria 6480
57 Ga0373937_0611755 3300036401 Bacteria 1034
58 Ga0316582_0107692 3300036647 Bacteria 1852
59 Ga0395900_0060609 3300037418 Bacteria 3894
60 Ga0395905_0005571 3300037471 Bacteria 12830
61 Ga0316581_0008397 3300037588 Bacteria 2809
62 Ga0400489_70724 3300039093 Bacteria 1096
63 Ga0436363_0907321 3300039450 Bacteria 2093
64 Ga0466969_0034829 3300044656 Bacteria 2550
65 Ga0466961_0013734 3300044693 Bacteria 5190
66 Ga0466959_0001320 3300045049 Bacteria 15059
67 Ga0495592_0177109 3300046454 Bacteria 1455
68 Ga0495603_0191662 3300046455 Bacteria 1182
69 Ga0495629_0085771 3300046459 Bacteria 2197
70 Ga0495651_0045976 3300046462 Bacteria 3380
71 Ga0495594_0090898 3300046499 Bacteria 1711
72 Ga0495594_0124202 3300046499 Bacteria 1460
73 Ga0495640_0005655 3300046533 Bacteria 9941
74 Ga0495667_0219980 3300046559 Bacteria 1212
75 Ga0495634_0144205 3300046642 Bacteria 1510
76 Ga0495625_0017891 3300046660 Bacteria 5540
77 Ga0495657_0013887 3300046675 Bacteria 5923
78 Ga0495613_0027455 3300046689 Bacteria 4235
79 Ga0495624_0039651 3300046690 Bacteria 3019
80 Ga0495604_0049698 3300047317 Bacteria 3256
81 Ga0495676_0024799 3300047321 Bacteria 5183
82 Ga0496100_0037270 3300048903 Bacteria 3073
83 Ga0496108_0000058 3300048911 Bacteria 123379
84 Ga0496126_0000159 3300048929 Bacteria 155348
85 Ga0501034_0001191 3300049571 Bacteria 35783
86 Ga0501034_0201201 3300049571 Bacteria 1950
87 Ga0501037_0079307 3300049573 Bacteria 2383
88 Ga0501047_0249562 3300049581 Bacteria 1623
89 Ga0501070_0067850 3300049586 Bacteria 2954
90 nmdc:mga07m45_87036_c1 3300050496 Bacteria 1787
91 nmdc:mga05p37_5213_c1 3300050507 Bacteria 15254
92 nmdc:mga05p37_588131_c1 3300050507 Bacteria 1259
93 nmdc:mga05p37_6226_c1 3300050507 Bacteria 14046
94 nmdc:mga09592_225123_c1 3300050508 Bacteria 1625
95 nmdc:mga09592_49313_c1 3300050508 Bacteria 3549
96 nmdc:mga06r32_108027_c1 3300050510 Unclassified 2735
97 nmdc:mga06r32_23597_c1 3300050510 Bacteria 5694
98 nmdc:mga06r32_8095_c1 3300050510 Bacteria 9458
99 nmdc:mga08y16_53994_c1 3300050511 Bacteria 4200
100 nmdc:mga0n895_179257_c1 3300050512 Bacteria 2150
101 nmdc:mga0rr50_107250_c1 3300050513 Bacteria 2205
102 nmdc:mga0a205_423481_c1 3300050515 Unclassified 1193
103 Ga0500646_0008526 3300053090 Bacteria 2622
104 Ga0501084_0023713 3300054114 Bacteria 5117
105 Ga0501082_0421140 3300060353 Unclassified 1166

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300050507 nmdc:mga05p37_588131_c1 nmdc:mga05p37_588131_c1_72_830 250
2 3300044656 Ga0466969_0034829 Ga0466969_0034829_986_1879 264
3 3300044693 Ga0466961_0013734 Ga0466961_0013734_1238_2131 264
4 3300045049 Ga0466959_0001320 Ga0466959_0001320_859_1752 264
5 3300032126 Ga0307415_100006066 Ga0307415_1000060662 268
6 3300039450 Ga0436363_0907321 Ga0436363_0907321_865_1764 268
7 3300010375 Ga0105239_10129619 Ga0105239_101296192 271
8 3300046642 Ga0495634_0144205 Ga0495634_0144205_519_1409 272
9 3300025915 Ga0207693_10048136 Ga0207693_100481362 273
10 3300025225 Ga0209566_100799 Ga0209566_10079917 275
11 3300046454 Ga0495592_0177109 Ga0495592_0177109_85_999 279
12 3300046455 Ga0495603_0191662 Ga0495603_0191662_174_1088 279
13 3300046462 Ga0495651_0045976 Ga0495651_0045976_19_933 279
14 3300046499 Ga0495594_0124202 Ga0495594_0124202_248_1162 279
15 3300046533 Ga0495640_0005655 Ga0495640_0005655_1048_1962 279
16 3300046559 Ga0495667_0219980 Ga0495667_0219980_188_1102 279
17 3300046675 Ga0495657_0013887 Ga0495657_0013887_772_1686 279
18 3300046689 Ga0495613_0027455 Ga0495613_0027455_1783_2697 279
19 3300046690 Ga0495624_0039651 Ga0495624_0039651_474_1388 279
20 3300047317 Ga0495604_0049698 Ga0495604_0049698_1784_2698 279
21 3300047321 Ga0495676_0024799 Ga0495676_0024799_4099_5013 279
22 3300007076 Ga0075435_100063766 Ga0075435_1000637663 280
23 3300050513 nmdc:mga0rr50_107250_c1 nmdc:mga0rr50_107250_c1_1233_2081 280
24 3300005981 Ga0081538_10000078 Ga0081538_1000007874 284
25 iso_pu_bacteria 2585427649 2586058917 284
26 3300006844 Ga0075428_100115147 Ga0075428_1001151472 285
27 3300009147 Ga0114129_10009155 Ga0114129_1000915512 285
28 3300050507 nmdc:mga05p37_6226_c1 nmdc:mga05p37_6226_c1_9476_10348 285
29 3300050508 nmdc:mga09592_225123_c1 nmdc:mga09592_225123_c1_490_1362 285
30 3300005983 Ga0081540_1011670 Ga0081540_10116702 286
31 3300031901 Ga0307406_10104171 Ga0307406_101041712 286
32 3300049571 Ga0501034_0001191 Ga0501034_0001191_17288_18199 288
33 3300049586 Ga0501070_0067850 Ga0501070_0067850_1305_2186 288
34 3300037418 Ga0395900_0060609 Ga0395900_0060609_2623_3507 289
35 3300048911 Ga0496108_0000058 Ga0496108_0000058_111225_112106 290
36 iso_pu_bacteria 2675903059 2676486047 290
37 iso_pu_bacteria 2784746768 2785368429 290
38 iso_pu_bacteria 2877676314 2877682099 290
39 iso_pu_bacteria 2954380949 2954387229 290
40 iso_pu_bacteria 8023623736 8023630635 290
41 iso_pu_bacteria 2899359706 2899363212 291
42 iso_pu_bacteria 2997451912 2997455744 291
43 3300046660 Ga0495625_0017891 Ga0495625_0017891_1514_2428 292
44 iso_pu_bacteria 2808606448 2809229313 292
45 3300025302 Ga0207426_1000877 Ga0207426_100087718 293
46 3300028786 Ga0307517_10066161 Ga0307517_100661613 293
47 3300046459 Ga0495629_0085771 Ga0495629_0085771_1236_2159 293
48 3300049573 Ga0501037_0079307 Ga0501037_0079307_803_1714 293
49 3300049581 Ga0501047_0249562 Ga0501047_0249562_674_1585 293
50 3300050496 nmdc:mga07m45_87036_c1 nmdc:mga07m45_87036_c1_567_1466 293
51 3300053090 Ga0500646_0008526 Ga0500646_0008526_800_1687 293
52 iso_pu_bacteria 2904755435 2904759756 294
53 3300003323 rootH1_10206213 rootH1_102062134 295
54 3300037471 Ga0395905_0005571 Ga0395905_0005571_2727_3623 295
55 3300049571 Ga0501034_0201201 Ga0501034_0201201_47_961 295
56 3300006844 Ga0075428_100111976 Ga0075428_1001119764 296
57 3300005337 Ga0070682_100051761 Ga0070682_1000517613 297
58 3300005458 Ga0070681_10053542 Ga0070681_100535422 297
59 3300005536 Ga0070697_100139946 Ga0070697_1001399462 297
60 3300009093 Ga0105240_10770987 Ga0105240_107709872 297
61 3300025917 Ga0207660_10020401 Ga0207660_100204014 297
62 3300031649 Ga0307514_10197106 Ga0307514_101971061 297
63 3300036401 Ga0373937_0611755 Ga0373937_0611755_37_936 297
64 3300005435 Ga0070714_100093460 Ga0070714_1000934603 298
65 3300005436 Ga0070713_100459606 Ga0070713_1004596061 298
66 3300006028 Ga0070717_10084891 Ga0070717_100848913 298
67 3300006175 Ga0070712_100011298 Ga0070712_1000112982 298
68 3300025915 Ga0207693_10006899 Ga0207693_100068992 298
69 3300025928 Ga0207700_10136046 Ga0207700_101360462 298
70 3300025929 Ga0207664_10024782 Ga0207664_100247822 298
71 3300046499 Ga0495594_0090898 Ga0495594_0090898_254_1228 298
72 3300048903 Ga0496100_0037270 Ga0496100_0037270_31_933 298
73 3300010375 Ga0105239_10014424 Ga0105239_1001442410 299
74 iso_pu_bacteria 2524614857 2526062906 299
75 iso_pu_bacteria 2739367875 2740063927 299
76 3300005467 Ga0070706_100226196 Ga0070706_1002261961 300
77 iso_pu_bacteria 2895880812 2895888471 300
78 2162886012 MBSR1b_contig_12915618 MBSR1b_0819.00001940 302
79 3300005445 Ga0070708_100044680 Ga0070708_1000446802 302
80 3300005467 Ga0070706_100004464 Ga0070706_10000446413 302
81 3300005468 Ga0070707_100000709 Ga0070707_10000070927 302
82 3300005471 Ga0070698_100014261 Ga0070698_1000142613 302
83 3300005471 Ga0070698_100097550 Ga0070698_1000975502 302
84 3300005530 Ga0070679_100075714 Ga0070679_1000757143 302
85 3300005536 Ga0070697_100183171 Ga0070697_1001831712 302
86 3300005618 Ga0068864_100025634 Ga0068864_1000256343 302
87 3300005844 Ga0068862_100097411 Ga0068862_1000974113 302
88 3300005937 Ga0081455_10012352 Ga0081455_100123526 302
89 3300005937 Ga0081455_10016488 Ga0081455_100164881 302
90 3300006028 Ga0070717_10025998 Ga0070717_100259983 302
91 3300006847 Ga0075431_100029283 Ga0075431_1000292835 302
92 3300006847 Ga0075431_100298363 Ga0075431_1002983632 302
93 3300006871 Ga0075434_100195875 Ga0075434_1001958752 302
94 3300009094 Ga0111539_10337773 Ga0111539_103377732 302
95 3300009147 Ga0114129_10081804 Ga0114129_100818043 302
96 3300009147 Ga0114129_10166381 Ga0114129_101663812 302
97 3300014325 Ga0163163_10478793 Ga0163163_104787932 302
98 3300020081 Ga0206354_10538349 Ga0206354_105383492 302
99 3300020082 Ga0206353_11060231 Ga0206353_110602316 302
100 3300025910 Ga0207684_10002809 Ga0207684_100028094 302
101 3300025916 Ga0207663_10231574 Ga0207663_102315741 302
102 3300025921 Ga0207652_10086830 Ga0207652_100868303 302
103 3300025922 Ga0207646_10001240 Ga0207646_1000124025 302
104 3300026088 Ga0207641_10035497 Ga0207641_100354974 302
105 3300036647 Ga0316582_0107692 Ga0316582_0107692_393_1313 302
106 3300037588 Ga0316581_0008397 Ga0316581_0008397_1661_2581 302
107 3300039093 Ga0400489_70724 Ga0400489_70724_33_947 302
108 3300048929 Ga0496126_0000159 Ga0496126_0000159_104475_105419 302
109 3300050507 nmdc:mga05p37_5213_c1 nmdc:mga05p37_5213_c1_13066_13980 302
110 3300050508 nmdc:mga09592_49313_c1 nmdc:mga09592_49313_c1_2405_3319 302
111 3300050510 nmdc:mga06r32_108027_c1 nmdc:mga06r32_108027_c1_1400_2314 302
112 3300050510 nmdc:mga06r32_23597_c1 nmdc:mga06r32_23597_c1_1498_2412 302
113 3300050510 nmdc:mga06r32_8095_c1 nmdc:mga06r32_8095_c1_1498_2427 302
114 3300050511 nmdc:mga08y16_53994_c1 nmdc:mga08y16_53994_c1_3159_4073 302
115 3300050512 nmdc:mga0n895_179257_c1 nmdc:mga0n895_179257_c1_706_1635 302
116 3300050515 nmdc:mga0a205_423481_c1 nmdc:mga0a205_423481_c1_43_957 302
117 3300054114 Ga0501084_0023713 Ga0501084_0023713_3606_4520 302
118 3300060353 Ga0501082_0421140 Ga0501082_0421140_12_926 302

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01636

APH

Phosphotransferase enzyme family

58

289

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
6ctz-assembly1.cif.gz_A "structure of the gdp and kanamycin complex of aph(2"")-iiia" 0.7948 18 297
3tdv-assembly2.cif.gz_B structure of the gdp complex of wild-type aminoglycoside 2'-phosphotransferase-iiia 0.7905 13 298
3tdw-assembly1.cif.gz_A the gdp complex of the aminoglycoside 2'-phosphotransfere-iiia f108l mutant 0.7803 14 302
3tdv-assembly2.cif.gz_B structure of the gdp complex of wild-type aminoglycoside 2'-phosphotransferase-iiia 0.7571 13 298
6ctz-assembly1.cif.gz_A "structure of the gdp and kanamycin complex of aph(2"")-iiia" 0.7514 18 297
ID Description Score Start End Superfamily
af_O05841_187_276_3.30.200.20 Alpha Beta;2-Layer Sandwich;Phosphorylase Kinase; domain 1;Phosphorylase Kinase; domain 1 0.9817 17 104 3.30.200.20
af_O05841_187_276_3.30.200.20 Alpha Beta;2-Layer Sandwich;Phosphorylase Kinase; domain 1;Phosphorylase Kinase; domain 1 0.9499 17 104 3.30.200.20
af_O05841_280_430_3.90.1200.10 Alpha Beta;Alpha-Beta Complex;Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2;Aminoglycoside phosphotransferase (APH), C-terminal lobe 0.9367 109 262 3.90.1200.10
af_O05841_280_430_3.90.1200.10 Alpha Beta;Alpha-Beta Complex;Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2;Aminoglycoside phosphotransferase (APH), C-terminal lobe 0.9248 109 262 3.90.1200.10
3tdvA01 Alpha Beta;2-Layer Sandwich;Phosphorylase Kinase; domain 1;Phosphorylase Kinase; domain 1 0.8936 13 110 3.30.200.20
ID Description Score Start End GO Terms
AF-A0A2E0Z5F7-F1-model_v4 Phosphotransferase 0.9886 7 302 GO:0016301
AF-A0A7V9T056-F1-model_v4 Aminoglycoside phosphotransferase family protein 0.9851 7 295 GO:0016301
AF-A0A0Q7M598-F1-model_v4 Aminoglycoside phosphotransferase domain-containing protein 0.9826 1 301 GO:0016301
AF-A0A6A7MII0-F1-model_v4 deleted 0.9794 1 298
AF-A0A0Q7M598-F1-model_v4 Aminoglycoside phosphotransferase domain-containing protein 0.9762 1 301 GO:0016301

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pLDDT pTM Quality
94.07 0.92 High
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Predicted Structure (AlphaFold2)

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