F094086

General Info

Members Datasets Scaffolds Average Seq Length
117 87 234 395

Family's Representative Sequence

Representative Sequence 3300044694|Ga0466963_0105152|Ga0466963_0105152_286_1641
Length 438
Sequence MRRDPAVSAGRACRARRFVGLTARLPADGVAGDFGRQSGAGDRERTQMALSTVERTSTQRVAAAAPADYAARARGMAPQLAAAAGEIDRTRQLPAAIADALVERGLFRLLLPHSLGGAELLPAQYIPVIEELAKADASTAWCVNQNSGCSMTAALLAPDIAREIFGGPRGILAWGPGPGEARVASGGYRVTAKWSFASGSQHASWLGCHVPIVEADGSMLFPKSSTKFTDIWHTIGLRGTASNQYEVQDLFVPEAYSVDVLSRRDGSTREPGLLYRFSSLSLYAGGFAGVALGIARATLDEFVVLARDKIPRGARNTMRNNNVIQAETAQAQARLSSARRWLLGSFEDIAAAVAERGHITLDERMTIRLASTFCIHTALEVVDVLYQAAGATAIFNENPFERRFRDIHSVAQQLQGRQQHFETVGQHLLGLEADTSWL

Samples

Sample ID Description Type Environment
1 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
6 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
7 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
11 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
14 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
15 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
18 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
21 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
22 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
23 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
24 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
25 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
26 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
27 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
28 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
29 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
30 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
31 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
32 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
33 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
34 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
35 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
36 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
52 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
53 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
54 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
55 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
56 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
57 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
58 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
59 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
60 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
61 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
62 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
63 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
64 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
65 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
66 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
67 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
68 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
69 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
70 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
71 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
72 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
73 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
74 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
75 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
76 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
77 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
78 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
79 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
80 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
81 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
82 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
83 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
84 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
85 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
86 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
87 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.42
Nodule 0
Rhizoplane 1.71
Rhizosphere 79.49
Stem 0
Stem Tuber 0
Unclassified 5.98

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466963_0105152 3300044694 Bacteria 1935
2 JGI25406J46586_10002088 3300003203 Bacteria 9440
3 Ga0070658_10002893 3300005327 Bacteria 14247
4 Ga0070680_100002035 3300005336 Bacteria 14923
5 Ga0070691_10043647 3300005341 Bacteria 2124
6 Ga0070671_100034925 3300005355 Bacteria 4164
7 Ga0070709_10011694 3300005434 Bacteria 4900
8 Ga0070714_100103694 3300005435 Bacteria 2509
9 Ga0070714_100186706 3300005435 Bacteria 1889
10 Ga0070713_100022285 3300005436 Bacteria 4893
11 Ga0070713_100103684 3300005436 Bacteria 2468
12 Ga0070713_100226982 3300005436 Bacteria 1696
13 Ga0070710_10002515 3300005437 Bacteria 8696
14 Ga0070711_100105502 3300005439 Bacteria 2058
15 Ga0070711_100277487 3300005439 Unclassified 1325
16 Ga0070681_10040153 3300005458 Bacteria 4691
17 Ga0070681_10187350 3300005458 Bacteria 1989
18 Ga0070707_100002050 3300005468 Bacteria 19299
19 Ga0070707_100289625 3300005468 Bacteria 1591
20 Ga0070698_100002767 3300005471 Bacteria 19286
21 Ga0070698_100010483 3300005471 Bacteria 9885
22 Ga0070699_100019454 3300005518 Bacteria 5846
23 Ga0070699_100247567 3300005518 Bacteria 1592
24 Ga0070679_100004698 3300005530 Bacteria 12599
25 Ga0070679_100126958 3300005530 Bacteria 2533
26 Ga0070684_100001889 3300005535 Bacteria 15348
27 Ga0070697_100064381 3300005536 Bacteria 2995
28 Ga0070665_100034656 3300005548 Bacteria 5077
29 Ga0068855_100015703 3300005563 Bacteria 9108
30 Ga0068857_100012089 3300005577 Bacteria 7506
31 Ga0068856_100136093 3300005614 Bacteria 2462
32 Ga0081455_10008872 3300005937 Bacteria 10397
33 Ga0081538_10052125 3300005981 Bacteria 2448
34 Ga0081539_10003231 3300005985 Bacteria 20543
35 Ga0070717_10004788 3300006028 Bacteria 9844
36 Ga0070717_10098015 3300006028 Unclassified 2484
37 Ga0075362_10033397 3300006177 Bacteria 2238
38 Ga0075366_10000792 3300006195 Bacteria 15136
39 Ga0075436_100039560 3300006914 Bacteria 3254
40 Ga0099795_10003759 3300007788 Bacteria 3811
41 Ga0105240_10018644 3300009093 Bacteria 9302
42 Ga0105237_10307685 3300009545 Bacteria 1587
43 Ga0157376_10147965 3300014969 Bacteria 2115
44 Ga0213876_10027877 3300021384 Unclassified 2978
45 Ga0213875_10000382 3300021388 Bacteria 39987
46 Ga0213875_10000552 3300021388 Bacteria 30617
47 Ga0213875_10000620 3300021388 Bacteria 28455
48 Ga0213875_10000863 3300021388 Bacteria 22384
49 Ga0207692_10082689 3300025898 Bacteria 1721
50 Ga0207684_10167895 3300025910 Bacteria 1891
51 Ga0207707_10001319 3300025912 Bacteria 23057
52 Ga0207707_10130928 3300025912 Bacteria 2194
53 Ga0207695_10012483 3300025913 Bacteria 10196
54 Ga0207693_10003669 3300025915 Bacteria 13106
55 Ga0207660_10027740 3300025917 Bacteria 3867
56 Ga0207652_10003449 3300025921 Bacteria 13043
57 Ga0207646_10003005 3300025922 Bacteria 19451
58 Ga0207646_10059802 3300025922 Bacteria 3403
59 Ga0207700_10332464 3300025928 Bacteria 1319
60 Ga0207665_10028263 3300025939 Bacteria 3704
61 Ga0207661_10000309 3300025944 Bacteria 31114
62 Ga0207667_10025489 3300025949 Bacteria 6470
63 Ga0207702_10097787 3300026078 Bacteria 2584
64 Ga0207674_10031544 3300026116 Bacteria 5566
65 Ga0268266_10001980 3300028379 Bacteria 22971
66 Ga0265325_10073843 3300031241 Bacteria 1707
67 Ga0265316_10068036 3300031344 Bacteria 2753
68 Ga0316575_10019767 3300031665 Bacteria 2578
69 Ga0373936_0037330 3300035113 Bacteria 1940
70 Ga0373954_0061117 3300035118 Bacteria 1778
71 Ga0373955_0101707 3300035172 Bacteria 1651
72 Ga0316574_0021274 3300035398 Bacteria 3851
73 Ga0373927_0051536 3300035695 Bacteria 2662
74 Ga0373933_0005472 3300035724 Bacteria 6916
75 Ga0373937_0013959 3300036401 Bacteria 7082
76 Ga0373937_0014987 3300036401 Bacteria 6849
77 Ga0395900_0007822 3300037418 Bacteria 11020
78 Ga0436364_0042928 3300037853 Bacteria 71182
79 Ga0436364_0440386 3300037853 Bacteria 2547
80 Ga0436364_0449559 3300037853 Bacteria 73062
81 Ga0436364_0607465 3300037853 Bacteria 39411
82 Ga0436364_0738835 3300037853 Bacteria 40799
83 Ga0436364_1209677 3300037853 Bacteria 8042
84 Ga0436364_1284200 3300037853 Bacteria 100206
85 Ga0436364_1546823 3300037853 Bacteria 14246
86 Ga0436365_0530708 3300039437 Bacteria 4041
87 Ga0436365_0900426 3300039437 Bacteria 7430
88 Ga0436365_1042555 3300039437 Bacteria 63963
89 Ga0436365_1672733 3300039437 Bacteria 1841
90 Ga0436360_0089372 3300039438 Bacteria 3545
91 Ga0436360_0712604 3300039438 Unclassified 1400
92 Ga0436360_0810807 3300039438 Bacteria 8244
93 Ga0436360_1173452 3300039438 Bacteria 2464
94 Ga0436363_1655723 3300039450 Bacteria 1769
95 Ga0466961_0032306 3300044693 Bacteria 3363
96 Ga0466963_0034629 3300044694 Bacteria 3287
97 Ga0466970_0079527 3300044765 Bacteria 1770
98 Ga0466957_0051631 3300044842 Bacteria 2503
99 Ga0495592_0168784 3300046454 Bacteria 1500
100 Ga0495639_0112218 3300046475 Bacteria 1295
101 Ga0495586_0072504 3300046535 Bacteria 1883
102 Ga0495667_0113696 3300046559 Unclassified 1749
103 Ga0495599_0075666 3300046678 Bacteria 2102
104 Ga0496104_0116857 3300048907 Unclassified 2560
105 Ga0496115_0079546 3300048918 Bacteria 2668
106 Ga0501034_0237884 3300049571 Bacteria 1768
107 Ga0501039_0171831 3300049575 Bacteria 1704
108 Ga0501071_0089229 3300049587 Bacteria 2262
109 Ga0501075_0017884 3300049591 Bacteria 5121
110 Ga0501079_0048839 3300049741 Bacteria 3266
111 Ga0501080_0017163 3300049742 Bacteria 6686
112 nmdc:mga03683_64818_c1 3300050489 Bacteria 1551
113 nmdc:mga0rr50_127296_c1 3300050513 Unclassified 2035
114 Ga0495612_0023036 3300053078 Bacteria 2497
115 Ga0495619_0059172 3300053085 Bacteria 2545
116 Ga0500568_0013596 3300053139 Bacteria 3706
117 Ga0501084_0070029 3300054114 Bacteria 2937
118 Ga0466963_0105152
119 JGI25406J46586_10002088
120 Ga0070658_10002893
121 Ga0070680_100002035
122 Ga0070691_10043647
123 Ga0070671_100034925
124 Ga0070709_10011694
125 Ga0070714_100103694
126 Ga0070714_100186706
127 Ga0070713_100022285
128 Ga0070713_100103684
129 Ga0070713_100226982
130 Ga0070710_10002515
131 Ga0070711_100105502
132 Ga0070711_100277487
133 Ga0070681_10040153
134 Ga0070681_10187350
135 Ga0070707_100002050
136 Ga0070707_100289625
137 Ga0070698_100002767
138 Ga0070698_100010483
139 Ga0070699_100019454
140 Ga0070699_100247567
141 Ga0070679_100004698
142 Ga0070679_100126958
143 Ga0070684_100001889
144 Ga0070697_100064381
145 Ga0070665_100034656
146 Ga0068855_100015703
147 Ga0068857_100012089
148 Ga0068856_100136093
149 Ga0081455_10008872
150 Ga0081538_10052125
151 Ga0081539_10003231
152 Ga0070717_10004788
153 Ga0070717_10098015
154 Ga0075362_10033397
155 Ga0075366_10000792
156 Ga0075436_100039560
157 Ga0099795_10003759
158 Ga0105240_10018644
159 Ga0105237_10307685
160 Ga0157376_10147965
161 Ga0213876_10027877
162 Ga0213875_10000382
163 Ga0213875_10000552
164 Ga0213875_10000620
165 Ga0213875_10000863
166 Ga0207692_10082689
167 Ga0207684_10167895
168 Ga0207707_10001319
169 Ga0207707_10130928
170 Ga0207695_10012483
171 Ga0207693_10003669
172 Ga0207660_10027740
173 Ga0207652_10003449
174 Ga0207646_10003005
175 Ga0207646_10059802
176 Ga0207700_10332464
177 Ga0207665_10028263
178 Ga0207661_10000309
179 Ga0207667_10025489
180 Ga0207702_10097787
181 Ga0207674_10031544
182 Ga0268266_10001980
183 Ga0265325_10073843
184 Ga0265316_10068036
185 Ga0316575_10019767
186 Ga0373936_0037330
187 Ga0373954_0061117
188 Ga0373955_0101707
189 Ga0316574_0021274
190 Ga0373927_0051536
191 Ga0373933_0005472
192 Ga0373937_0013959
193 Ga0373937_0014987
194 Ga0395900_0007822
195 Ga0436364_0042928
196 Ga0436364_0440386
197 Ga0436364_0449559
198 Ga0436364_0607465
199 Ga0436364_0738835
200 Ga0436364_1209677
201 Ga0436364_1284200
202 Ga0436364_1546823
203 Ga0436365_0530708
204 Ga0436365_0900426
205 Ga0436365_1042555
206 Ga0436365_1672733
207 Ga0436360_0089372
208 Ga0436360_0712604
209 Ga0436360_0810807
210 Ga0436360_1173452
211 Ga0436363_1655723
212 Ga0466961_0032306
213 Ga0466963_0034629
214 Ga0466970_0079527
215 Ga0466957_0051631
216 Ga0495592_0168784
217 Ga0495639_0112218
218 Ga0495586_0072504
219 Ga0495667_0113696
220 Ga0495599_0075666
221 Ga0496104_0116857
222 Ga0496115_0079546
223 Ga0501034_0237884
224 Ga0501039_0171831
225 Ga0501071_0089229
226 Ga0501075_0017884
227 Ga0501079_0048839
228 Ga0501080_0017163
229 nmdc:mga03683_64818_c1
230 nmdc:mga0rr50_127296_c1
231 Ga0495612_0023036
232 Ga0495619_0059172
233 Ga0500568_0013596
234 Ga0501084_0070029

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08028

Acyl-CoA_dh_2

Acyl-CoA dehydrogenase, C-terminal domain

285

417

0.98

PF02771

Acyl-CoA_dh_N

Acyl-CoA dehydrogenase, N-terminal domain

68

158

0.88

PF00441

Acyl-CoA_dh_1

Acyl-CoA dehydrogenase, C-terminal domain

272

419

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
7f72-assembly1.cif.gz_A rv3094c in complex with fad and eth. 0.949 18 403
7f74-assembly1.cif.gz_D rv3094c in complex with fmn. 0.9485 17 403
7f70-assembly1.cif.gz_A crystal structure of rv3094c 0.9467 17 403
7f72-assembly1.cif.gz_A rv3094c in complex with fad and eth. 0.944 18 403
7f74-assembly1.cif.gz_D rv3094c in complex with fmn. 0.9436 17 403
ID Description Score Start End Superfamily
af_O05773_204_374_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.976 236 399 1.20.140.10
af_O05773_204_374_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9314 236 399 1.20.140.10
3afeD02 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.9241 121 224 2.40.110.10
af_O05773_2_108_1.10.540.10 Mainly Alpha;Orthogonal Bundle;Butyryl-Coa Dehydrogenase, subunit A; domain 1;Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.9132 15 118 1.10.540.10
2or0A01 Mainly Alpha;Orthogonal Bundle;Butyryl-Coa Dehydrogenase, subunit A; domain 1;Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.9125 17 115 1.10.540.10
ID Description Score Start End GO Terms
AF-A0A2V6RKW4-F1-model_v4 Acyl-CoA dehydrogenase C-terminal domain-containing protein 0.9824 212 403 GO:0016020
GO:0016627
AF-A0A2V6RKW4-F1-model_v4 Acyl-CoA dehydrogenase C-terminal domain-containing protein 0.9773 212 403 GO:0016020
GO:0016627
AF-A0A2E9Y372-F1-model_v4 Acyl-CoA dehydrogenase 0.9748 17 403 GO:0003995
GO:0050660
AF-A0A127ETD8-F1-model_v4 Acyl-CoA dehydrogenase 0.9743 14 402 GO:0003995
GO:0005737
GO:0033539
GO:0050660
AF-A0A2E5L849-F1-model_v4 Acyl-CoA dehydrogenase 0.9734 17 397 GO:0003995
GO:0050660

Map