F090608

General Info

Members Datasets Scaffolds Average Seq Length
116 103 232 652

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2997600082|2997603517
Length 759
Sequence VRRTTLTLPAAPLGPGNPLPALRPLDETHRVDERVRATLPADMARQVAYRPLRSVLPVRLRDGYGRDRLPTALDALVLENDHLRATVLPGLGGRVHSLHHKPTGRELLYRNPVFQPADFALNGAWFSGGIEWNIGATGHTTLSCAPLHAARVPAPDAADGGAMVRLWEWERLRDLPFQVDLWLPADSAFLYVGVRIRNPHHHPAPVYWWSNIAVPEDERTRVLAPADEAWHFGYTRTLTRVPVPEWNGADRSYPLRGSHPADYFYELPEDARRWIAAVDDRGHGLVQTSTDLLRGRKLFLWGAGPGGRRWQRWLTEPGTGGYAEIQAGLARTQLEHVPLDAGEEFAWLEAYGPLSADPAAAHGEDWAAARRAIEERLEAALPRATVDAAYDAWRPYADAALEQRLATGSGWGALEVERGGHRLPGTPFDPDTLGAEQEPWRRLLRTGALPAWEPGPSRADPGPSLVAPAWRDLLEAAPATAAAEYHLGVAQWHAGDRAQAERSWERSLRCAESPWALRCLAVADSEAGHPSRAAERLLRAVRLVLATTNPVTEAVATQRAATGRVTEAVAVEPVATESSAAPTPVGVSLAAPPVPADPDPRAMEAAEAALGREAVVALLAVDRADDARAVLDALRPAVRARGRFRLLRAQVLLAQGDPEAARAVFDEGFEVCDLREGDEALSDTWYAIAEALIARPGEPRTEATRTRARAEHPLPEPYEFRMRPAQAPGAGPSSHGPAAPGFRQSVGLRSTYSKTDPSG

Samples

Sample ID Description Type Environment
1 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
2 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
3 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
4 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
5 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
6 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
7 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
8 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
9 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
10 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
11 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
12 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
13 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
14 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
15 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
16 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
17 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
18 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
19 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
20 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
21 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
22 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
23 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
24 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
25 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
26 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
27 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
28 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
29 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
30 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
31 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
32 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
33 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
34 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
35 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
36 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
37 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
38 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
39 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
40 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
41 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
42 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
43 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
44 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
45 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
46 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
47 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
48 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
49 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
50 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
51 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
52 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
53 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
54 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
55 2643221578 Streptomyces sp. Root63 Isolate Unclassified
56 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
57 2643221670 Streptomyces sp. Root431 Isolate Unclassified
58 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
59 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
60 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
61 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
62 2802429296 Streptomyces sampsonii KJ40 Isolate Rhizosphere
63 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
64 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
65 2808606448 Streptomyces sp. 193411 Isolate Unclassified
66 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
67 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
68 2818991472 Kitasatospora viridis DSM 44826 Isolate Rhizosphere
69 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
70 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
71 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
72 2867346516 Streptomyces radicis AZ1-7 Isolate Unclassified
73 2867369537 Streptomyces sp. Z26 Isolate Unclassified
74 2867428634 Streptomyces sp. RP5T Isolate Unclassified
75 2867475112 Streptomyces sp. TM32 Isolate Unclassified
76 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
77 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
78 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
79 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
80 2917736166 Amycolatopsis dendrobii DR6-1 Isolate Unclassified
81 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
82 2935390628 Streptomyces sp. PvR034 Isolate Rhizosphere
83 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
84 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
85 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
86 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
87 2995463766 Streptacidiphilus fuscans NEAU-YB345 Isolate Unclassified
88 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
89 3006321560 Actinacidiphila epipremni PRB2-1 Isolate Unclassified
90 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
91 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
92 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
93 8025478263 Streptomyces telluris AA8 Isolate Rhizosphere
94 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
95 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
96 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
97 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
98 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
99 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
100 8054160619 Streptomyces rhizoryzae RS10V-4 Isolate Rhizosphere
101 8056667051 Streptomyces sichuanensis SCA3-4 Isolate Rhizosphere
102 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere
103 8057568493 Actinorhabdospora filicis NBRC 111898 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 53.45
Metatranscriptomes 0
Isolates 46.55

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.86
Nodule 0
Rhizoplane 0.86
Rhizosphere 69.83
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10065195 3300003323 Bacteria 6938
2 Ga0070665_100017747 3300005548 Bacteria 7146
3 Ga0068855_100021880 3300005563 Bacteria 7665
4 Ga0068854_100030967 3300005578 Bacteria 3715
5 Ga0075428_100005158 3300006844 Bacteria 14522
6 Ga0105240_10046842 3300009093 Bacteria 5475
7 Ga0105238_10018367 3300009551 Bacteria 7117
8 Ga0105238_10134119 3300009551 Bacteria 2454
9 Ga0105239_10101377 3300010375 Bacteria 3185
10 Ga0182008_10000981 3300014497 Bacteria 19805
11 Ga0183367_1001 3300015688 Bacteria 1225545
12 Ga0213875_10000967 3300021388 Bacteria 20554
13 Ga0207426_1000871 3300025302 Bacteria 31475
14 Ga0207647_10054058 3300025904 Bacteria 2472
15 Ga0207654_10030278 3300025911 Bacteria 2970
16 Ga0207695_10012168 3300025913 Bacteria 10343
17 Ga0207671_10000128 3300025914 Bacteria 117836
18 Ga0207694_10001189 3300025924 Bacteria 22545
19 Ga0207678_10129746 3300026067 Bacteria 2150
20 Ga0307512_10036816 3300030522 Bacteria 4143
21 Ga0265331_10006017 3300031250 Bacteria 7233
22 Ga0265327_10000157 3300031251 Bacteria 146060
23 Ga0265327_10000582 3300031251 Bacteria 61528
24 Ga0307513_10080215 3300031456 Bacteria 3367
25 Ga0307514_10043829 3300031649 Bacteria 3510
26 Ga0307516_10065479 3300031730 Bacteria 3509
27 Ga0436364_0663647 3300037853 Bacteria 22897
28 Ga0450903_001336 3300042138 Bacteria 4606
29 Ga0439458_0000078 3300042157 Bacteria 18206
30 Ga0466967_0038407 3300045976 Bacteria 4106
31 Ga0495603_0001397 3300046455 Bacteria 14042
32 Ga0495603_0026433 3300046455 Bacteria 3506
33 Ga0495629_0010242 3300046459 Bacteria 6828
34 Ga0495629_0061346 3300046459 Bacteria 2628
35 Ga0495594_0007221 3300046499 Bacteria 5714
36 Ga0495594_0037428 3300046499 Bacteria 2647
37 Ga0495622_0019243 3300046557 Bacteria 3179
38 Ga0495613_0052024 3300046689 Bacteria 3017
39 Ga0495636_0002430 3300047318 Bacteria 7139
40 Ga0495676_0022783 3300047321 Bacteria 5443
41 Ga0495676_0055205 3300047321 Bacteria 3151
42 Ga0495687_003403 3300047443 Bacteria 11584
43 Ga0501031_0039800 3300049568 Bacteria 3068
44 Ga0501032_0014146 3300049569 Bacteria 5656
45 Ga0501034_0013798 3300049571 Bacteria 8314
46 Ga0501034_0019845 3300049571 Bacteria 6868
47 Ga0501034_0035036 3300049571 Bacteria 5090
48 Ga0501036_0086228 3300049572 Bacteria 2654
49 Ga0501036_0095386 3300049572 Bacteria 2514
50 Ga0501037_0067272 3300049573 Bacteria 2609
51 Ga0501038_0096569 3300049574 Bacteria 2466
52 Ga0501043_0005513 3300049579 Bacteria 10219
53 Ga0501043_0062320 3300049579 Bacteria 2928
54 Ga0501046_0107919 3300049580 Bacteria 2129
55 Ga0501047_0003466 3300049581 Bacteria 14904
56 Ga0501047_0007897 3300049581 Bacteria 10033
57 Ga0501047_0064769 3300049581 Bacteria 3525
58 Ga0501067_0001532 3300049583 Bacteria 12582
59 Ga0501035_0026934 3300049822 Bacteria 5256
60 Ga0501045_0017828 3300049824 Bacteria 5043
61 nmdc:mga06r32_136259_c1 3300050510 Bacteria 2430
62 Ga0501082_0031381 3300060353 Bacteria 4581
63 2997603517 2997600082 Bacteria 9896405
64 2585298186 2582581312 Bacteria 7308206
65 2585304665 2582581313 Bacteria 10042643
66 2616901454 2616644941 Bacteria 8510691
67 2643901966 2643221578 Bacteria 9213798
68 2643946211 2643221587 Bacteria 7586415
69 2644387981 2643221670 Bacteria 6497041
70 2644408110 2643221673 Bacteria 9196637
71 2644433000 2643221677 Bacteria 7584031
72 2774395837 2773857762 Bacteria 5971770
73 2786675325 2786546132 Bacteria 10419719
74 2804848930 2802429296 Bacteria 7227771
75 2808914607 2808606375 Bacteria 9466072
76 2809199160 2808606439 Bacteria 5952208
77 2809235282 2808606448 Bacteria 8656184
78 2811843512 2808606982 Bacteria 7791042
79 2812348049 2811994878 Bacteria 5992952
80 2819745116 2818991472 Bacteria 10089953
81 2862184025 2862178590 Bacteria 8583590
82 2862283389 2862281513 Bacteria 9621493
83 2862507785 2862507626 Bacteria 9425308
84 2867352779 2867346516 Bacteria 7608576
85 2867374676 2867369537 Bacteria 6501581
86 2867435126 2867428634 Bacteria 9590268
87 2867481004 2867475112 Bacteria 6909112
88 2873152877 2873151551 Bacteria 8625867
89 2877678057 2877676314 Bacteria 9512378
90 2912729165 2912723979 Bacteria 8557534
91 2912763922 2912757875 Bacteria 7940295
92 2917736167 2917736166 Bacteria 9690793
93 2918507546 2918501144 Bacteria 8668083
94 2935395394 2935390628 Bacteria 7043367
95 2946046800 2946045630 Bacteria 8527308
96 2954680048 2954673503 Bacteria 9685905
97 2954684102 2954682443 Bacteria 9862841
98 2990090576 2990088156 Bacteria 6657676
99 2995467918 2995463766 Bacteria 8577691
100 2995469699 2995463766 Bacteria 8577691
101 2997457363 2997451912 Bacteria 8492419
102 3006323143 3006321560 Bacteria 8247479
103 3006490708 3006486233 Bacteria 8157040
104 8023626194 8023623736 Bacteria 8593882
105 8025417541 8025413630 Bacteria 7014048
106 8025478706 8025478263 Bacteria 8209203
107 8025533079 8025530807 Bacteria 8495698
108 8047895296 8047893842 Bacteria 11723082
109 8048130590 8048127548 Bacteria 11053136
110 8048363657 8048356638 Bacteria 11044339
111 8048372322 8048369669 Bacteria 11666822
112 8048381256 8048379754 Bacteria 11877923
113 8054161919 8054160619 Bacteria 7783213
114 8056667289 8056667051 Bacteria 6953971
115 8056837041 8056829672 Bacteria 9045328
116 8057568649 8057568493 Bacteria 7221719
117 rootH1_10065195
118 Ga0070665_100017747
119 Ga0068855_100021880
120 Ga0068854_100030967
121 Ga0075428_100005158
122 Ga0105240_10046842
123 Ga0105238_10018367
124 Ga0105238_10134119
125 Ga0105239_10101377
126 Ga0182008_10000981
127 Ga0183367_1001
128 Ga0213875_10000967
129 Ga0207426_1000871
130 Ga0207647_10054058
131 Ga0207654_10030278
132 Ga0207695_10012168
133 Ga0207671_10000128
134 Ga0207694_10001189
135 Ga0207678_10129746
136 Ga0307512_10036816
137 Ga0265331_10006017
138 Ga0265327_10000157
139 Ga0265327_10000582
140 Ga0307513_10080215
141 Ga0307514_10043829
142 Ga0307516_10065479
143 Ga0436364_0663647
144 Ga0450903_001336
145 Ga0439458_0000078
146 Ga0466967_0038407
147 Ga0495603_0001397
148 Ga0495603_0026433
149 Ga0495629_0010242
150 Ga0495629_0061346
151 Ga0495594_0007221
152 Ga0495594_0037428
153 Ga0495622_0019243
154 Ga0495613_0052024
155 Ga0495636_0002430
156 Ga0495676_0022783
157 Ga0495676_0055205
158 Ga0495687_003403
159 Ga0501031_0039800
160 Ga0501032_0014146
161 Ga0501034_0013798
162 Ga0501034_0019845
163 Ga0501034_0035036
164 Ga0501036_0086228
165 Ga0501036_0095386
166 Ga0501037_0067272
167 Ga0501038_0096569
168 Ga0501043_0005513
169 Ga0501043_0062320
170 Ga0501046_0107919
171 Ga0501047_0003466
172 Ga0501047_0007897
173 Ga0501047_0064769
174 Ga0501067_0001532
175 Ga0501035_0026934
176 Ga0501045_0017828
177 nmdc:mga06r32_136259_c1
178 Ga0501082_0031381
179 2997603517
180 2585298186
181 2585304665
182 2616901454
183 2643901966
184 2643946211
185 2644387981
186 2644408110
187 2644433000
188 2774395837
189 2786675325
190 2804848930
191 2808914607
192 2809199160
193 2809235282
194 2811843512
195 2812348049
196 2819745116
197 2862184025
198 2862283389
199 2862507785
200 2867352779
201 2867374676
202 2867435126
203 2867481004
204 2873152877
205 2877678057
206 2912729165
207 2912763922
208 2917736167
209 2918507546
210 2935395394
211 2946046800
212 2954680048
213 2954684102
214 2990090576
215 2995467918
216 2995469699
217 2997457363
218 3006323143
219 3006490708
220 8023626194
221 8025417541
222 8025478706
223 8025533079
224 8047895296
225 8048130590
226 8048363657
227 8048372322
228 8048381256
229 8054161919
230 8056667289
231 8056837041
232 8057568649

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF17128

DUF5107

Domain of unknown function (DUF5107)

51

344

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
6i7k-assembly1.cif.gz_A crystal structure of monomeric ficd mutant l258d complexed with mgatp 0.928 462 523
2avp-assembly1.cif.gz_A crystal structure of an 8 repeat consensus tpr superhelix 0.907 465 525
3ma5-assembly3.cif.gz_C crystal structure of the tetratricopeptide repeat domain protein q2s6c5_salrd from salinibacter ruber. northeast structural genomics consortium target srr115c. 0.8617 462 551
7tj4-assembly2.cif.gz_C structure of the s. aureus amidase lyth and activator acth extracellular domains 0.8512 450 525
2kcl-assembly1.cif.gz_A solution nmr structure of tetratricopeptide repeat domain protein sru_0103 from salinibacter ruber, northeast structural genomics consortium (nesg) target srr115c 0.8509 462 551
ID Description Score Start End Superfamily
af_I1KC83_546_629_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9244 462 525 1.25.40.10
af_B0BN85_9_138_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9109 452 525 1.25.40.10
af_Q4V8A2_665_768_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8962 450 525 1.25.40.10
af_P76585_40_301_2.70.98.10 Mainly Beta;Distorted Sandwich;Beta-galactosidase; Chain A, domain 5; 0.8902 66 304 2.70.98.10
af_A0A2R8QGZ1_204_325_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8878 450 525 1.25.40.10
ID Description Score Start End GO Terms
AF-A0A6I5MZE7-F1-model_v4 deleted 0.9903 5 425
AF-A0A7K2KM46-F1-model_v4 DUF5107 domain-containing protein 0.9854 5 298 GO:0003824
GO:0005975
GO:0030246
AF-A0A3S0CUJ8-F1-model_v4 DUF5107 domain-containing protein 0.9853 3 621
AF-A0A1R1SSB5-F1-model_v4 DUF5107 domain-containing protein 0.9816 8 514
AF-A0A1C5BW89-F1-model_v4 Tetratricopeptide repeat-containing protein 0.9783 166 623

Map