F089513

General Info

Members Datasets Scaffolds Average Seq Length
116 99 232 125

Family's Representative Sequence

Representative Sequence 3300044842|Ga0466957_1031643|Ga0466957_1031643_62_484
Length 140
Sequence MAESEGAGARDVRPLVVVDGANVVGSVPDGWWRDRRGAAERLRDRLAGCAGAGVPGWPGPVEVVLVVEGAARGVGSVPGVRVESAVGSGDDRIVEVVAEASGRACLVVTADRELRRRVVSLGAEVAGPRVVRGGSAEGAP

Samples

Sample ID Description Type Environment
1 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
4 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
5 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
6 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
7 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
8 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
9 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
10 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
11 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
12 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
13 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
14 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
15 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
16 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
17 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
18 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
19 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
20 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
21 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
22 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
25 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
26 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
27 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
28 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
29 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
30 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
31 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
32 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
33 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
34 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
35 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
36 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
37 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
38 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
39 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
40 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
41 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
42 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
43 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
44 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
45 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
46 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
47 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
48 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
49 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
50 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
51 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
52 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
53 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
54 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
55 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
56 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
57 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
58 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
59 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
60 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
61 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
62 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
63 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
64 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
65 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
66 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
67 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
68 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
69 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
70 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
71 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
72 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
73 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
74 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
75 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
76 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
77 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
78 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
79 2523231044 Gordonia rhizosphera NBRC 16068 Isolate Rhizosphere
80 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
81 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
82 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
83 2802429296 Streptomyces sampsonii KJ40 Isolate Rhizosphere
84 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
85 2808606448 Streptomyces sp. 193411 Isolate Unclassified
86 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
87 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
88 2861520306 Phytomonospora endophytica DSM 45386 Isolate Unclassified
89 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
90 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
91 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
92 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
93 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
94 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
95 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
96 8001781756 Catellatospora tritici NEAU-YM18 Isolate Rhizosphere
97 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
98 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
99 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 81.03
Metatranscriptomes 0.86
Isolates 18.1

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.72
Rhizosphere 76.72
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466957_1031643 3300044842 Bacteria 591
2 JGI25406J46586_10036932 3300003203 Bacteria 1768
3 Ga0006562J51391_1071844 3300003578 Bacteria 1540
4 Ga0070714_101162431 3300005435 Bacteria 753
5 Ga0070713_100069678 3300005436 Bacteria 2967
6 Ga0070665_100942350 3300005548 Bacteria 876
7 Ga0068855_100460437 3300005563 Bacteria 1387
8 Ga0081455_10144825 3300005937 Bacteria 1840
9 Ga0081539_10003347 3300005985 Bacteria 19904
10 Ga0070717_10011499 3300006028 Bacteria 6724
11 Ga0075431_100818132 3300006847 Bacteria 904
12 Ga0075436_100832414 3300006914 Bacteria 688
13 Ga0105244_10180095 3300009036 Bacteria 1003
14 Ga0105246_10017534 3300011119 Bacteria 4552
15 Ga0157369_10111219 3300013105 Bacteria 2911
16 Ga0157372_10859826 3300013307 Bacteria 1053
17 Ga0157380_13098399 3300014326 Bacteria 530
18 Ga0182008_10001282 3300014497 Bacteria 17245
19 Ga0182007_10000145 3300015262 Bacteria 47705
20 Ga0207647_10020264 3300025904 Bacteria 4461
21 Ga0207667_10185601 3300025949 Bacteria 2135
22 Ga0207668_11622402 3300025972 Bacteria 584
23 Ga0207683_10250830 3300026121 Bacteria 1615
24 Ga0307515_10044049 3300028794 Bacteria 6911
25 Ga0307515_10156168 3300028794 Bacteria 2353
26 Ga0307512_10001091 3300030522 Bacteria 39432
27 Ga0307513_10028611 3300031456 Bacteria 6367
28 Ga0307513_10238595 3300031456 Bacteria 1625
29 Ga0307509_10071745 3300031507 Bacteria 3610
30 Ga0307508_10008824 3300031616 Bacteria 9301
31 Ga0307508_10365952 3300031616 Bacteria 1033
32 Ga0307514_10252042 3300031649 Bacteria 1044
33 Ga0307516_10018246 3300031730 Bacteria 7296
34 Ga0307516_10022919 3300031730 Bacteria 6407
35 Ga0307516_10044544 3300031730 Bacteria 4388
36 Ga0307518_10355880 3300031838 Bacteria 849
37 Ga0307410_11418994 3300031852 Bacteria 610
38 Ga0307415_100679312 3300032126 Bacteria 927
39 Ga0307507_10086296 3300033179 Bacteria 2723
40 Ga0307507_10289970 3300033179 Bacteria 1014
41 Ga0307510_10041512 3300033180 Bacteria 5028
42 Ga0373954_0371021 3300035118 Bacteria 707
43 Ga0373937_0137015 3300036401 Bacteria 2289
44 Ga0395900_0174751 3300037418 Bacteria 2185
45 Ga0395898_0018119 3300037466 Bacteria 7186
46 Ga0395898_0027626 3300037466 Bacteria 5692
47 Ga0395898_0046540 3300037466 Bacteria 4262
48 Ga0395905_1345765 3300037471 Bacteria 618
49 Ga0439433_0007110 3300041999 Bacteria 2416
50 Ga0439432_013947 3300042006 Bacteria 2724
51 Ga0439449_0002128 3300042007 Bacteria 7771
52 Ga0439449_0016163 3300042007 Bacteria 2806
53 Ga0439455_0086635 3300042012 Bacteria 856
54 Ga0439457_004361 3300042014 Bacteria 3695
55 Ga0439462_0029690 3300042015 Bacteria 1446
56 Ga0439458_0016097 3300042157 Bacteria 1699
57 Ga0439458_0195379 3300042157 Bacteria 552
58 Ga0466963_0270175 3300044694 Bacteria 1194
59 Ga0466964_0025394 3300044706 Bacteria 2313
60 Ga0466970_0085622 3300044765 Bacteria 1707
61 Ga0495603_0402196 3300046455 Bacteria 785
62 Ga0495638_0042059 3300046460 Bacteria 2888
63 Ga0495605_0109369 3300046474 Bacteria 1263
64 Ga0495585_0069254 3300046492 Bacteria 1926
65 Ga0495607_0115458 3300046501 Bacteria 1417
66 Ga0495616_0314221 3300046513 Bacteria 659
67 Ga0495611_0009157 3300046648 Bacteria 4184
68 Ga0495589_0090084 3300046794 Bacteria 1489
69 Ga0495683_0053246 3300047323 Bacteria 2019
70 Ga0495687_009448 3300047443 Bacteria 5447
71 Ga0495685_000484 3300047447 Bacteria 12390
72 Ga0495686_0047920 3300047472 Bacteria 2697
73 Ga0496108_1767062 3300048911 Bacteria 507
74 Ga0496109_1971225 3300048912 Bacteria 516
75 Ga0501032_0265089 3300049569 Bacteria 1114
76 Ga0501036_0807434 3300049572 Bacteria 772
77 Ga0501036_0822325 3300049572 Bacteria 764
78 Ga0501037_0261649 3300049573 Bacteria 1208
79 Ga0501038_0000488 3300049574 Bacteria 34890
80 Ga0501043_0125272 3300049579 Bacteria 2014
81 Ga0501043_0328290 3300049579 Bacteria 1165
82 Ga0501047_0080466 3300049581 Bacteria 3131
83 Ga0501048_0199625 3300049582 Bacteria 1418
84 Ga0501070_0644604 3300049586 Bacteria 841
85 Ga0501070_1237730 3300049586 Bacteria 572
86 Ga0501083_0992920 3300049744 Bacteria 546
87 Ga0501035_0037920 3300049822 Bacteria 4363
88 Ga0501035_0062615 3300049822 Bacteria 3310
89 Ga0501035_0101773 3300049822 Bacteria 2521
90 Ga0501044_0006952 3300049823 Bacteria 12452
91 Ga0501044_0192640 3300049823 Bacteria 2000
92 Ga0501044_0578132 3300049823 Bacteria 1018
93 Ga0501045_0827488 3300049824 Bacteria 681
94 nmdc:mga08x19_747974_c1 3300050514 Bacteria 694
95 Ga0495619_0113467 3300053085 Bacteria 1853
96 2523386936 2523231044 Bacteria 6434991
97 2623588626 2622736626 Bacteria 7181580
98 2784591163 2784132148 Bacteria 8627943
99 2785372204 2784746768 Bacteria 10036182
100 2804848620 2802429296 Bacteria 7227771
101 2808914220 2808606375 Bacteria 9466072
102 2809234741 2808606448 Bacteria 8656184
103 2812478042 2811994917 Bacteria 7761064
104 2852638784 2852635781 Bacteria 8251373
105 2861524003 2861520306 Bacteria 8348283
106 2862284010 2862281513 Bacteria 9621493
107 2862514045 2862507626 Bacteria 9425308
108 2912716947 2912715099 Bacteria 9460473
109 2912729508 2912723979 Bacteria 8557534
110 2946070595 2946064051 Bacteria 8957905
111 2947226245 2947224130 Bacteria 9938529
112 3006493924 3006486233 Bacteria 8157040
113 8001789249 8001781756 Bacteria 9586736
114 8008576532 8008574985 Bacteria 7815457
115 8023624695 8023623736 Bacteria 8593882
116 8025419112 8025413630 Bacteria 7014048
117 Ga0466957_1031643
118 JGI25406J46586_10036932
119 Ga0006562J51391_1071844
120 Ga0070714_101162431
121 Ga0070713_100069678
122 Ga0070665_100942350
123 Ga0068855_100460437
124 Ga0081455_10144825
125 Ga0081539_10003347
126 Ga0070717_10011499
127 Ga0075431_100818132
128 Ga0075436_100832414
129 Ga0105244_10180095
130 Ga0105246_10017534
131 Ga0157369_10111219
132 Ga0157372_10859826
133 Ga0157380_13098399
134 Ga0182008_10001282
135 Ga0182007_10000145
136 Ga0207647_10020264
137 Ga0207667_10185601
138 Ga0207668_11622402
139 Ga0207683_10250830
140 Ga0307515_10044049
141 Ga0307515_10156168
142 Ga0307512_10001091
143 Ga0307513_10028611
144 Ga0307513_10238595
145 Ga0307509_10071745
146 Ga0307508_10008824
147 Ga0307508_10365952
148 Ga0307514_10252042
149 Ga0307516_10018246
150 Ga0307516_10022919
151 Ga0307516_10044544
152 Ga0307518_10355880
153 Ga0307410_11418994
154 Ga0307415_100679312
155 Ga0307507_10086296
156 Ga0307507_10289970
157 Ga0307510_10041512
158 Ga0373954_0371021
159 Ga0373937_0137015
160 Ga0395900_0174751
161 Ga0395898_0018119
162 Ga0395898_0027626
163 Ga0395898_0046540
164 Ga0395905_1345765
165 Ga0439433_0007110
166 Ga0439432_013947
167 Ga0439449_0002128
168 Ga0439449_0016163
169 Ga0439455_0086635
170 Ga0439457_004361
171 Ga0439462_0029690
172 Ga0439458_0016097
173 Ga0439458_0195379
174 Ga0466963_0270175
175 Ga0466964_0025394
176 Ga0466970_0085622
177 Ga0495603_0402196
178 Ga0495638_0042059
179 Ga0495605_0109369
180 Ga0495585_0069254
181 Ga0495607_0115458
182 Ga0495616_0314221
183 Ga0495611_0009157
184 Ga0495589_0090084
185 Ga0495683_0053246
186 Ga0495687_009448
187 Ga0495685_000484
188 Ga0495686_0047920
189 Ga0496108_1767062
190 Ga0496109_1971225
191 Ga0501032_0265089
192 Ga0501036_0807434
193 Ga0501036_0822325
194 Ga0501037_0261649
195 Ga0501038_0000488
196 Ga0501043_0125272
197 Ga0501043_0328290
198 Ga0501047_0080466
199 Ga0501048_0199625
200 Ga0501070_0644604
201 Ga0501070_1237730
202 Ga0501083_0992920
203 Ga0501035_0037920
204 Ga0501035_0062615
205 Ga0501035_0101773
206 Ga0501044_0006952
207 Ga0501044_0192640
208 Ga0501044_0578132
209 Ga0501045_0827488
210 nmdc:mga08x19_747974_c1
211 Ga0495619_0113467
212 2523386936
213 2623588626
214 2784591163
215 2785372204
216 2804848620
217 2808914220
218 2809234741
219 2812478042
220 2852638784
221 2861524003
222 2862284010
223 2862514045
224 2912716947
225 2912729508
226 2946070595
227 2947226245
228 3006493924
229 8001789249
230 8008576532
231 8023624695
232 8025419112

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Structural Annotation

Top 5 Hits

ID Description Score Start End
5mq9-assembly1.cif.gz_A crystal structure of rae1 (yacp) from bacillus subtilis (w164l mutant) 0.8106 3 122
5mq9-assembly2.cif.gz_B crystal structure of rae1 (yacp) from bacillus subtilis (w164l mutant) 0.8009 5 121
5mq8-assembly1.cif.gz_D crystal structure of rae1 (yacp) from bacillus subtilis 0.7953 1 121
5mq8-assembly1.cif.gz_D crystal structure of rae1 (yacp) from bacillus subtilis 0.7719 1 121
5mq9-assembly1.cif.gz_A crystal structure of rae1 (yacp) from bacillus subtilis (w164l mutant) 0.7514 3 122
ID Description Score Start End Superfamily
af_O53977_3_135_3.40.50.1010 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;5'-nuclease 0.8503 7 119 3.40.50.1010
af_I1KNP9_112_278_3.40.50.1010 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;5'-nuclease 0.8236 7 121 3.40.50.1010
af_Q2G2M5_6_169_3.40.50.1010 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;5'-nuclease 0.7805 7 119 3.40.50.1010
af_O53977_3_135_3.40.50.1010 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;5'-nuclease 0.7733 7 119 3.40.50.1010
af_I1KNP9_112_278_3.40.50.1010 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;5'-nuclease 0.7623 7 121 3.40.50.1010
ID Description Score Start End GO Terms
AF-A0A0M4DPU6-F1-model_v4 NTP pyrophosphohydrolase 0.9869 2 124 GO:0016787
AF-A0A561W9S1-F1-model_v4 YacP-like NYN domain-containing protein 0.9868 1 124
AF-A0A1X4GWH4-F1-model_v4 deleted 0.9844 2 122
AF-A0A4R6J6W5-F1-model_v4 YacP-like NYN domain-containing protein 0.9842 2 124
AF-A0A238XWH5-F1-model_v4 YacP-like NYN domain-containing protein 0.983 3 124

Map