F088455
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 116 | 84 | 102 | 570 |
Family's Representative Sequence
| Representative Sequence | 3300025272|Ga0209455_1000897|Ga0209455_10008976 |
| Length | 641 |
| Sequence | VRGGVVGLRLFFTQGGALCWHIFPFQGKYYKVEPKTKFPAGDTYVGTGHRPVCYQRSDLYRALRFVSSHYPVFIPNFITMKIFSELKKNLKNDFSNLIPVKVALLGDNPTQLLSIALRGTGYDMGFDLQVWEADFDQIERQVFDPASELYVYKPDVVIVFHSSHQLLQKYNKLSPEDYSSLAEKRLKQVENLSAAINSGLSAKIIYYNYPEINDAVFGSYANKALSSFLYQIRKLNYELMEYATNSAGFYICDLAAVQNQYGKATLFQPSVYINTGMVLSIDILPEVAARTVELIAAMYGKIKKCLVFDLDNTIWGGVIGDDGIENIQLGSLGIGKAFTELQYWLKKLKNRGVILVACSKNTEAVAMEAFEKHPDMVLKPDDIAMFTVNWDNKVDNLHRIQSSLNIGFDSMVFLDDNPFERNMVRENIPEITAPELYSLNLFETASLSNEDAERTKIYQTEAKRIEEQQSFVNEDDFLRSLNMVSMVEPFTNFNIPRVAQLTQRSNQFNLRTIRYTEAELKKLMESPGVFSFSFGLEDKFGDNGLIAAVILKKENDDTLFIDTWLMSCRVLKRGMENFVLNEVIGAAAKNGFKYLKGEYLPTTKNGIVKDHYANLGFTEHDGYWVMPVSDYQIKNTFISRK |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2585428060 | Chryseobacterium sp. OV715 | Isolate | Rhizosphere |
| 2 | 2588253712 | Chryseobacterium sp. OV279 | Isolate | Rhizosphere |
| 3 | 2588254257 | Chryseobacterium sp. YR203 | Isolate | Rhizosphere |
| 4 | 2728369107 | Chryseobacterium kwangjuense KJ1R5 | Isolate | Unclassified |
| 5 | 2739367700 | Dyella sp. YR388 | Isolate | Unclassified |
| 6 | 2772190705 | Chryseobacterium contaminans C-26 | Isolate | Rhizosphere |
| 7 | 2775506739 | Chryseobacterium sp. 1335 | Isolate | Unclassified |
| 8 | 2842083920 | Chryseobacterium lathyri KCTC 22544 | Isolate | Rhizosphere |
| 9 | 2852627209 | Pedobacter sp. AK017 | Isolate | Rhizosphere |
| 10 | 2905999023 | Chryseobacterium elymi KCTC 22547 | Isolate | Rhizosphere |
| 11 | 2919097161 | Chryseobacterium ginsenosidimutans 1394 | Isolate | Rhizosphere |
| 12 | 2919437846 | Mucilaginibacter pocheonensis 3262 | Isolate | Rhizosphere |
| 13 | 2946019816 | Chryseobacterium sp. W4I1 | Isolate | Rhizosphere |
| 14 | 2977243572 | Chryseobacterium sp. SORGH_AS 447 | Isolate | Unclassified |
| 15 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 16 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 17 | 3300005341 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG | Metagenome | Rhizosphere |
| 18 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 20 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 21 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 22 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 23 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 24 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 25 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 26 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 27 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 28 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 29 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 30 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 31 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 32 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 33 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 34 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 35 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 36 | 3300015261 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG | Metagenome | Rhizosphere |
| 37 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 38 | 3300025250 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) | Metagenome | Unclassified |
| 39 | 3300025272 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 40 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 50 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300028577 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG | Metagenome | Rhizosphere |
| 52 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 53 | 3300031238 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG | Metagenome | Rhizosphere |
| 54 | 3300031250 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG | Metagenome | Rhizosphere |
| 55 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 56 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 57 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 58 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 59 | 3300033180 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM | Metagenome | Unclassified |
| 60 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 61 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 62 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 63 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 64 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 65 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 66 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 67 | 3300046512 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere | Metagenome | Rhizosphere |
| 68 | 3300046520 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere | Metagenome | Rhizosphere |
| 69 | 3300046524 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere | Metagenome | Rhizosphere |
| 70 | 3300046538 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere | Metagenome | Rhizosphere |
| 71 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 72 | 3300047320 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere | Metagenome | Rhizosphere |
| 73 | 3300047323 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere | Metagenome | Rhizosphere |
| 74 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 75 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 76 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 77 | 3300049686 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control | Metagenome | Rhizosphere |
| 78 | 3300049758 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought | Metagenome | Rhizosphere |
| 79 | 3300049766 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought | Metagenome | Rhizosphere |
| 80 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 81 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 82 | 3300050515 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation | Metagenome | Rhizosphere |
| 83 | 3300053080 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere | Metagenome | Endosphere |
| 84 | 3300053156 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere | Metagenome | Endosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 87.93 |
| Metatranscriptomes | 0 |
| Isolates | 12.07 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 4.31 |
| Nodule | 0 |
| Rhizoplane | 0 |
| Rhizosphere | 80.17 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 15.52 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | rootH2_10024526 | 3300003320 | Bacteria | 11781 |
| 2 | rootH1_10008232 | 3300003323 | Bacteria | 19239 |
| 3 | rootH1_10016880 | 3300003323 | Bacteria | 64867 |
| 4 | rootH1_10085621 | 3300003323 | Bacteria | 3335 |
| 5 | Ga0070691_10009954 | 3300005341 | Bacteria | 4332 |
| 6 | Ga0070667_100022036 | 3300005367 | Bacteria | 5286 |
| 7 | Ga0068867_100080158 | 3300005459 | Bacteria | 2458 |
| 8 | Ga0068853_100011129 | 3300005539 | Bacteria | 7298 |
| 9 | Ga0068855_100000035 | 3300005563 | Bacteria | 165487 |
| 10 | Ga0068855_100053563 | 3300005563 | Bacteria | 4746 |
| 11 | Ga0068855_100108172 | 3300005563 | Bacteria | 3194 |
| 12 | Ga0068856_100000023 | 3300005614 | Bacteria | 141671 |
| 13 | Ga0068856_100031961 | 3300005614 | Bacteria | 5151 |
| 14 | Ga0068856_100050254 | 3300005614 | Unclassified | 4110 |
| 15 | Ga0068863_100002596 | 3300005841 | Bacteria | 17916 |
| 16 | Ga0068860_100000728 | 3300005843 | Bacteria | 37437 |
| 17 | Ga0070717_10113444 | 3300006028 | Unclassified | 2314 |
| 18 | Ga0075366_10023449 | 3300006195 | Bacteria | 3595 |
| 19 | Ga0068871_100001400 | 3300006358 | Bacteria | 16139 |
| 20 | Ga0105240_10018721 | 3300009093 | Bacteria | 9278 |
| 21 | Ga0105240_10029199 | 3300009093 | Bacteria | 7191 |
| 22 | Ga0105240_10089063 | 3300009093 | Bacteria | 3775 |
| 23 | Ga0105240_10126238 | 3300009093 | Bacteria | 3074 |
| 24 | Ga0105240_10132096 | 3300009093 | Bacteria | 2994 |
| 25 | Ga0111539_10005725 | 3300009094 | Bacteria | 16073 |
| 26 | Ga0105242_10047240 | 3300009176 | Bacteria | 3495 |
| 27 | Ga0105237_10000503 | 3300009545 | Bacteria | 55383 |
| 28 | Ga0105237_10003431 | 3300009545 | Bacteria | 18829 |
| 29 | Ga0105239_10000008 | 3300010375 | Bacteria | 376925 |
| 30 | Ga0105239_10000038 | 3300010375 | Bacteria | 205230 |
| 31 | Ga0105239_10000643 | 3300010375 | Bacteria | 49700 |
| 32 | Ga0105239_10018781 | 3300010375 | Bacteria | 7638 |
| 33 | Ga0105239_10024268 | 3300010375 | Bacteria | 6679 |
| 34 | Ga0105239_10028916 | 3300010375 | Bacteria | 6092 |
| 35 | Ga0157373_10000031 | 3300013100 | Bacteria | 126446 |
| 36 | Ga0157369_10056746 | 3300013105 | Bacteria | 4225 |
| 37 | Ga0157372_10042658 | 3300013307 | Bacteria | 5019 |
| 38 | Ga0157372_10063827 | 3300013307 | Bacteria | 4131 |
| 39 | Ga0157372_10149309 | 3300013307 | Bacteria | 2696 |
| 40 | Ga0182006_1000001 | 3300015261 | Bacteria | 1091090 |
| 41 | Ga0163161_10082071 | 3300017792 | Bacteria | 2375 |
| 42 | Ga0209026_1000392 | 3300025250 | Bacteria | 39123 |
| 43 | Ga0209026_1002854 | 3300025250 | Bacteria | 6098 |
| 44 | Ga0209455_1000897 | 3300025272 | Bacteria | 15567 |
| 45 | Ga0207695_10002474 | 3300025913 | Bacteria | 27225 |
| 46 | Ga0207695_10032912 | 3300025913 | Bacteria | 5666 |
| 47 | Ga0207695_10037162 | 3300025913 | Bacteria | 5256 |
| 48 | Ga0207695_10048444 | 3300025913 | Bacteria | 4487 |
| 49 | Ga0207671_10001992 | 3300025914 | Bacteria | 22504 |
| 50 | Ga0207671_10002434 | 3300025914 | Bacteria | 19923 |
| 51 | Ga0207671_10018440 | 3300025914 | Bacteria | 5354 |
| 52 | Ga0207686_10075209 | 3300025934 | Bacteria | 2186 |
| 53 | Ga0207667_10000022 | 3300025949 | Bacteria | 369570 |
| 54 | Ga0207667_10000229 | 3300025949 | Bacteria | 78821 |
| 55 | Ga0207667_10025525 | 3300025949 | Bacteria | 6467 |
| 56 | Ga0207667_10038266 | 3300025949 | Bacteria | 5124 |
| 57 | Ga0207639_10004860 | 3300026041 | Bacteria | 9050 |
| 58 | Ga0207678_10083139 | 3300026067 | Bacteria | 2738 |
| 59 | Ga0207702_10000314 | 3300026078 | Bacteria | 55437 |
| 60 | Ga0207641_10000137 | 3300026088 | Bacteria | 106549 |
| 61 | Ga0207648_10094720 | 3300026089 | Bacteria | 2611 |
| 62 | Ga0207428_10021998 | 3300027907 | Bacteria | 5386 |
| 63 | Ga0268264_10000132 | 3300028381 | Bacteria | 180760 |
| 64 | Ga0265318_10004409 | 3300028577 | Bacteria | 6831 |
| 65 | Ga0307515_10002605 | 3300028794 | Bacteria | 38845 |
| 66 | Ga0265332_10002781 | 3300031238 | Bacteria | 8702 |
| 67 | Ga0265331_10004172 | 3300031250 | Bacteria | 9058 |
| 68 | Ga0265327_10000030 | 3300031251 | Bacteria | 333531 |
| 69 | Ga0265327_10000897 | 3300031251 | Bacteria | 43913 |
| 70 | Ga0265327_10009603 | 3300031251 | Bacteria | 6951 |
| 71 | Ga0265316_10017954 | 3300031344 | Bacteria | 6096 |
| 72 | Ga0307412_10000027 | 3300031911 | Bacteria | 214663 |
| 73 | Ga0307412_10000634 | 3300031911 | Bacteria | 20466 |
| 74 | Ga0307416_100000006 | 3300032002 | Bacteria | 466074 |
| 75 | Ga0307510_10018004 | 3300033180 | Bacteria | 8323 |
| 76 | Ga0307510_10025886 | 3300033180 | Bacteria | 6758 |
| 77 | Ga0395905_0001728 | 3300037471 | Bacteria | 25571 |
| 78 | Ga0436365_1631164 | 3300039437 | Bacteria | 13717 |
| 79 | Ga0466972_0006209 | 3300044658 | Bacteria | 6002 |
| 80 | Ga0453683_0008730 | 3300044673 | Bacteria | 6794 |
| 81 | Ga0453684_0058159 | 3300044712 | Bacteria | 4995 |
| 82 | Ga0451576_0002506 | 3300045051 | Bacteria | 27244 |
| 83 | Ga0495606_0006171 | 3300046507 | Bacteria | 11153 |
| 84 | Ga0495610_0000005 | 3300046512 | Bacteria | 924111 |
| 85 | Ga0495637_0021797 | 3300046520 | Bacteria | 2932 |
| 86 | Ga0495648_0018954 | 3300046524 | Bacteria | 4855 |
| 87 | Ga0495609_0040313 | 3300046538 | Bacteria | 2101 |
| 88 | Ga0495668_0000576 | 3300046616 | Bacteria | 44790 |
| 89 | Ga0495672_0002216 | 3300047320 | Bacteria | 18072 |
| 90 | Ga0495683_0018443 | 3300047323 | Bacteria | 3609 |
| 91 | Ga0496122_0001072 | 3300048925 | Bacteria | 47508 |
| 92 | Ga0496122_0001251 | 3300048925 | Bacteria | 42652 |
| 93 | Ga0496123_0001224 | 3300048926 | Bacteria | 37423 |
| 94 | Ga0496125_0000133 | 3300048928 | Bacteria | 161487 |
| 95 | Ga0501257_007028 | 3300049686 | Bacteria | 2509 |
| 96 | Ga0501241_000015 | 3300049758 | Bacteria | 100297 |
| 97 | Ga0501269_000198 | 3300049766 | Bacteria | 18087 |
| 98 | nmdc:mga0k408_13736_c1 | 3300050493 | Bacteria | 4447 |
| 99 | nmdc:mga08y16_3778_c1 | 3300050511 | Bacteria | 15770 |
| 100 | nmdc:mga0a205_37622_c1 | 3300050515 | Bacteria | 4653 |
| 101 | Ga0500635_0000780 | 3300053080 | Bacteria | 7921 |
| 102 | Ga0500622_0008417 | 3300053156 | Bacteria | 5771 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300046538 | Ga0495609_0040313 | Ga0495609_0040313_288_2015 | 487 |
| 2 | 3300015261 | Ga0182006_1000001 | Ga0182006_1000001721 | 495 |
| 3 | 3300046512 | Ga0495610_0000005 | Ga0495610_0000005_332156_333883 | 496 |
| 4 | 3300025250 | Ga0209026_1002854 | Ga0209026_10028543 | 505 |
| 5 | 3300048925 | Ga0496122_0001251 | Ga0496122_0001251_34018_35745 | 508 |
| 6 | 3300044673 | Ga0453683_0008730 | Ga0453683_0008730_1322_3061 | 524 |
| 7 | 3300044712 | Ga0453684_0058159 | Ga0453684_0058159_310_2049 | 524 |
| 8 | 3300045051 | Ga0451576_0002506 | Ga0451576_0002506_23955_25694 | 524 |
| 9 | 3300005563 | Ga0068855_100000035 | Ga0068855_10000003532 | 528 |
| 10 | 3300025949 | Ga0207667_10000022 | Ga0207667_10000022202 | 528 |
| 11 | 3300013105 | Ga0157369_10056746 | Ga0157369_100567463 | 531 |
| 12 | 3300013307 | Ga0157372_10042658 | Ga0157372_100426584 | 531 |
| 13 | 3300046524 | Ga0495648_0018954 | Ga0495648_0018954_2885_4606 | 531 |
| 14 | 3300046616 | Ga0495668_0000576 | Ga0495668_0000576_11280_13001 | 531 |
| 15 | 3300053080 | Ga0500635_0000780 | Ga0500635_0000780_4066_5802 | 534 |
| 16 | 3300005539 | Ga0068853_100011129 | Ga0068853_1000111293 | 535 |
| 17 | 3300013100 | Ga0157373_10000031 | Ga0157373_1000003193 | 535 |
| 18 | 3300026041 | Ga0207639_10004860 | Ga0207639_100048605 | 535 |
| 19 | 3300005341 | Ga0070691_10009954 | Ga0070691_100099543 | 537 |
| 20 | 3300006028 | Ga0070717_10113444 | Ga0070717_101134441 | 538 |
| 21 | 3300031251 | Ga0265327_10000030 | Ga0265327_10000030139 | 538 |
| 22 | 3300005563 | Ga0068855_100108172 | Ga0068855_1001081722 | 540 |
| 23 | 3300005614 | Ga0068856_100000023 | Ga0068856_100000023127 | 540 |
| 24 | 3300005614 | Ga0068856_100031961 | Ga0068856_1000319613 | 540 |
| 25 | 3300006358 | Ga0068871_100001400 | Ga0068871_10000140010 | 540 |
| 26 | 3300009093 | Ga0105240_10126238 | Ga0105240_101262382 | 540 |
| 27 | 3300009545 | Ga0105237_10003431 | Ga0105237_1000343114 | 540 |
| 28 | 3300010375 | Ga0105239_10018781 | Ga0105239_100187812 | 540 |
| 29 | 3300017792 | Ga0163161_10082071 | Ga0163161_100820713 | 540 |
| 30 | 3300025250 | Ga0209026_1000392 | Ga0209026_100039230 | 540 |
| 31 | 3300025914 | Ga0207671_10002434 | Ga0207671_100024343 | 540 |
| 32 | 3300025949 | Ga0207667_10000229 | Ga0207667_1000022923 | 540 |
| 33 | 3300025949 | Ga0207667_10025525 | Ga0207667_100255252 | 540 |
| 34 | 3300026078 | Ga0207702_10000314 | Ga0207702_100003146 | 540 |
| 35 | 3300028577 | Ga0265318_10004409 | Ga0265318_100044095 | 540 |
| 36 | 3300031238 | Ga0265332_10002781 | Ga0265332_100027815 | 540 |
| 37 | 3300031250 | Ga0265331_10004172 | Ga0265331_100041725 | 540 |
| 38 | 3300031344 | Ga0265316_10017954 | Ga0265316_100179544 | 540 |
| 39 | 3300031911 | Ga0307412_10000027 | Ga0307412_1000002748 | 540 |
| 40 | 3300031911 | Ga0307412_10000634 | Ga0307412_100006346 | 540 |
| 41 | 3300049758 | Ga0501241_000015 | Ga0501241_000015_49416_51149 | 540 |
| 42 | 3300049766 | Ga0501269_000198 | Ga0501269_000198_10464_12197 | 540 |
| 43 | 3300005459 | Ga0068867_100080158 | Ga0068867_1000801581 | 541 |
| 44 | 3300009176 | Ga0105242_10047240 | Ga0105242_100472401 | 541 |
| 45 | 3300010375 | Ga0105239_10028916 | Ga0105239_100289162 | 541 |
| 46 | 3300025272 | Ga0209455_1000897 | Ga0209455_10008976 | 541 |
| 47 | 3300025914 | Ga0207671_10018440 | Ga0207671_100184403 | 541 |
| 48 | 3300025934 | Ga0207686_10075209 | Ga0207686_100752091 | 541 |
| 49 | 3300026089 | Ga0207648_10094720 | Ga0207648_100947201 | 541 |
| 50 | 3300046520 | Ga0495637_0021797 | Ga0495637_0021797_1060_2781 | 541 |
| 51 | 3300009093 | Ga0105240_10018721 | Ga0105240_100187216 | 543 |
| 52 | 3300010375 | Ga0105239_10024268 | Ga0105239_100242684 | 543 |
| 53 | 3300025913 | Ga0207695_10002474 | Ga0207695_1000247416 | 543 |
| 54 | 3300033180 | Ga0307510_10018004 | Ga0307510_100180048 | 543 |
| 55 | 3300047323 | Ga0495683_0018443 | Ga0495683_0018443_649_2391 | 543 |
| 56 | 3300053156 | Ga0500622_0008417 | Ga0500622_0008417_2769_4496 | 543 |
| 57 | iso_pu_bacteria | 2852627209 | 2852631276 | 544 |
| 58 | iso_pu_bacteria | 2919437846 | 2919438088 | 546 |
| 59 | 3300003323 | rootH1_10085621 | rootH1_100856212 | 548 |
| 60 | 3300009093 | Ga0105240_10089063 | Ga0105240_100890634 | 548 |
| 61 | 3300010375 | Ga0105239_10000008 | Ga0105239_10000008290 | 548 |
| 62 | 3300025913 | Ga0207695_10032912 | Ga0207695_100329122 | 548 |
| 63 | 3300031251 | Ga0265327_10009603 | Ga0265327_100096035 | 548 |
| 64 | 3300044658 | Ga0466972_0006209 | Ga0466972_0006209_1693_3432 | 548 |
| 65 | iso_pu_bacteria | 2585428060 | 2587746359 | 548 |
| 66 | iso_pu_bacteria | 2588253712 | 2588447431 | 548 |
| 67 | iso_pu_bacteria | 2588254257 | 2590610069 | 548 |
| 68 | iso_pu_bacteria | 2728369107 | 2729200916 | 548 |
| 69 | iso_pu_bacteria | 2739367700 | 2739729832 | 548 |
| 70 | iso_pu_bacteria | 2772190705 | 2772603821 | 548 |
| 71 | iso_pu_bacteria | 2775506739 | 2775672583 | 548 |
| 72 | iso_pu_bacteria | 2842083920 | 2842087255 | 548 |
| 73 | iso_pu_bacteria | 2905999023 | 2905999114 | 548 |
| 74 | iso_pu_bacteria | 2919097161 | 2919099889 | 548 |
| 75 | iso_pu_bacteria | 2946019816 | 2946023954 | 548 |
| 76 | iso_pu_bacteria | 2977243572 | 2977245722 | 548 |
| 77 | 3300005367 | Ga0070667_100022036 | Ga0070667_1000220364 | 549 |
| 78 | 3300005614 | Ga0068856_100050254 | Ga0068856_1000502543 | 549 |
| 79 | 3300005841 | Ga0068863_100002596 | Ga0068863_10000259613 | 549 |
| 80 | 3300005843 | Ga0068860_100000728 | Ga0068860_1000007288 | 549 |
| 81 | 3300013307 | Ga0157372_10063827 | Ga0157372_100638273 | 549 |
| 82 | 3300026067 | Ga0207678_10083139 | Ga0207678_100831392 | 549 |
| 83 | 3300026088 | Ga0207641_10000137 | Ga0207641_1000013748 | 549 |
| 84 | 3300028381 | Ga0268264_10000132 | Ga0268264_1000013278 | 549 |
| 85 | 3300033180 | Ga0307510_10025886 | Ga0307510_100258864 | 549 |
| 86 | 3300047320 | Ga0495672_0002216 | Ga0495672_0002216_14495_16303 | 549 |
| 87 | 3300009094 | Ga0111539_10005725 | Ga0111539_100057253 | 550 |
| 88 | 3300027907 | Ga0207428_10021998 | Ga0207428_100219984 | 550 |
| 89 | 3300028794 | Ga0307515_10002605 | Ga0307515_100026054 | 550 |
| 90 | 3300037471 | Ga0395905_0001728 | Ga0395905_0001728_13640_15469 | 550 |
| 91 | 3300046507 | Ga0495606_0006171 | Ga0495606_0006171_6586_8304 | 550 |
| 92 | 3300050511 | nmdc:mga08y16_3778_c1 | nmdc:mga08y16_3778_c1_11271_13109 | 550 |
| 93 | 3300050515 | nmdc:mga0a205_37622_c1 | nmdc:mga0a205_37622_c1_552_2390 | 550 |
| 94 | 3300013307 | Ga0157372_10149309 | Ga0157372_101493092 | 551 |
| 95 | 3300031251 | Ga0265327_10000897 | Ga0265327_100008979 | 551 |
| 96 | 3300032002 | Ga0307416_100000006 | Ga0307416_100000006216 | 551 |
| 97 | 3300048925 | Ga0496122_0001072 | Ga0496122_0001072_8281_10014 | 551 |
| 98 | 3300048926 | Ga0496123_0001224 | Ga0496123_0001224_27410_29143 | 551 |
| 99 | 3300048928 | Ga0496125_0000133 | Ga0496125_0000133_108814_110547 | 551 |
| 100 | 3300049686 | Ga0501257_007028 | Ga0501257_007028_53_1810 | 551 |
| 101 | 3300003320 | rootH2_10024526 | rootH2_100245265 | 552 |
| 102 | 3300003323 | rootH1_10008232 | rootH1_100082326 | 552 |
| 103 | 3300003323 | rootH1_10016880 | rootH1_1001688049 | 552 |
| 104 | 3300005563 | Ga0068855_100053563 | Ga0068855_1000535632 | 552 |
| 105 | 3300006195 | Ga0075366_10023449 | Ga0075366_100234493 | 552 |
| 106 | 3300009093 | Ga0105240_10029199 | Ga0105240_100291997 | 552 |
| 107 | 3300009093 | Ga0105240_10132096 | Ga0105240_101320962 | 552 |
| 108 | 3300009545 | Ga0105237_10000503 | Ga0105237_1000050317 | 552 |
| 109 | 3300010375 | Ga0105239_10000038 | Ga0105239_10000038129 | 552 |
| 110 | 3300010375 | Ga0105239_10000643 | Ga0105239_1000064333 | 552 |
| 111 | 3300025913 | Ga0207695_10037162 | Ga0207695_100371622 | 552 |
| 112 | 3300025913 | Ga0207695_10048444 | Ga0207695_100484442 | 552 |
| 113 | 3300025914 | Ga0207671_10001992 | Ga0207671_1000199217 | 552 |
| 114 | 3300025949 | Ga0207667_10038266 | Ga0207667_100382665 | 552 |
| 115 | 3300039437 | Ga0436365_1631164 | Ga0436365_1631164_2158_3879 | 552 |
| 116 | 3300050493 | nmdc:mga0k408_13736_c1 | nmdc:mga0k408_13736_c1_1406_3127 | 552 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3slr-assembly1.cif.gz_A | crystal structure of n-terminal part of the protein bf1531 from bacteroides fragilis containing phosphatase domain complexed with mg. | 0.9442 | 1 | 379 |
| 3slr-assembly1.cif.gz_A | crystal structure of n-terminal part of the protein bf1531 from bacteroides fragilis containing phosphatase domain complexed with mg. | 0.9418 | 1 | 379 |
| 6add-assembly1.cif.gz_B | the crystal structure of rv2747 from mycobacterium tuberculosis in complex with coa and nlq | 0.8071 | 421 | 529 |
| 3pp9-assembly2.cif.gz_C | 1.6 angstrom resolution crystal structure of putative streptothricin acetyltransferase from bacillus anthracis str. ames in complex with acetyl coenzyme a | 0.7839 | 436 | 538 |
| 1y9k-assembly3.cif.gz_C | iaa acetyltransferase from bacillus cereus atcc 14579 | 0.7834 | 455 | 529 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 3slrA01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;SGNH hydrolase | 0.9567 | 1 | 221 | 3.40.50.1110 |
| 3slrA01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;SGNH hydrolase | 0.9524 | 1 | 221 | 3.40.50.1110 |
| 3nvbA02 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HAD superfamily/HAD-like | 0.9436 | 223 | 376 | 3.40.50.1000 |
| 3nvbA02 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HAD superfamily/HAD-like | 0.9259 | 223 | 376 | 3.40.50.1000 |
| af_A0A1D6G8A0_124_211_3.40.630.30 | Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Gcn5-related N-acetyltransferase (GNAT) | 0.8046 | 438 | 530 | 3.40.630.30 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A4Q6DMS6-F1-model_v4 | BF1531-like N-terminal domain-containing protein | 0.9949 | 1 | 82 |
|
| AF-A0A2N2ZVB9-F1-model_v4 | BF1531-like N-terminal domain-containing protein | 0.9911 | 1 | 71 |
|
| AF-A0A2N5ZH42-F1-model_v4 | N-acetyltransferase domain-containing protein | 0.9787 | 471 | 550 |
|
| AF-A0A2N2ZVB9-F1-model_v4 | BF1531-like N-terminal domain-containing protein | 0.9642 | 1 | 71 |
|
| AF-A0A4Q3ER68-F1-model_v4 | BF1531-like N-terminal domain-containing protein | 0.9605 | 1 | 274 |
|
Predicted Structure (AlphaFold2)
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