F087222

General Info

Members Datasets Scaffolds Average Seq Length
116 95 108 217

Family's Representative Sequence

Representative Sequence 3300005455|Ga0070663_100363711|Ga0070663_1003637111
Length 242
Sequence MHGGRQIPSACPCPHLIQRKETALALKLYAHPFSSYCQKVLIALYENSIPFEFRMLSLNEDAAMAELSALWPLKRIPVLVDEGRTVVESSIIIEHLGLHHPGPVRLIPEQADLALRVRMMDRFFDNYVMTPMQRIVLDSLRAAEDRDSQGVAEAKSLLNTTYGWLNEVLSEQEWAAGGSFSLADCAAAPSLFYADWVHPIDPKFAYARAYRERLLARPSFARIVEEARPYRSLFPLGAPDRD

Samples

Sample ID Description Type Environment
1 2562617112 Burkholderia sp. BT03 Isolate Rhizosphere
2 2711768613 Burkholderia sp. BT03 Isolate Rhizosphere
3 2808606384 Burkholderia sp. SJZ089 Isolate Rhizosphere
4 2808606390 Burkholderia sp. SJZ115 Isolate Rhizosphere
5 2808606391 Burkholderia sp. SJZ091 Isolate Rhizosphere
6 2818991467 Bosea vestrisii 3192 Isolate Unclassified
7 2895395659 Rhodanobacter sp. T12-5 Isolate Unclassified
8 2904615490 Paraburkholderia franconis CNPSo 3157 Isolate Unclassified
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
15 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
16 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
17 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
18 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
19 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
22 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
23 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
24 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
25 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
26 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
27 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
28 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
29 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
30 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
31 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
32 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
33 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
34 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
35 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
36 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
37 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
38 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
49 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
50 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
51 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
52 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
53 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
54 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
55 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
56 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
57 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
58 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
59 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
60 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
61 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
62 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
63 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
64 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
65 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
66 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
67 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
68 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
69 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
70 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
71 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
72 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
73 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
74 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
75 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
76 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
77 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
78 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
79 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
80 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
81 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
82 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
83 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
84 3300049514 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A25_B_5_drought Metagenome Rhizosphere
85 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
86 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
87 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
88 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
89 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
90 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
91 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
92 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
93 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
94 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
95 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.1
Metatranscriptomes 0
Isolates 6.9

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.9
Nodule 0
Rhizoplane 8.62
Rhizosphere 75
Stem 0
Stem Tuber 0
Unclassified 9.48

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068868_100196416 3300005338 Bacteria 1680
2 Ga0070668_100397578 3300005347 Bacteria 1176
3 Ga0070667_100329396 3300005367 Bacteria 1379
4 Ga0070714_100299544 3300005435 Bacteria 1498
5 Ga0070713_100930234 3300005436 Bacteria 837
6 Ga0070708_100007934 3300005445 Bacteria 8502
7 Ga0070708_100702483 3300005445 Bacteria 952
8 Ga0070663_100167856 3300005455 Bacteria 1694
9 Ga0070663_100363711 3300005455 Bacteria 1174
10 Ga0070706_100964116 3300005467 Bacteria 787
11 Ga0070698_100111604 3300005471 Bacteria 2699
12 Ga0070699_100008393 3300005518 Bacteria 8949
13 Ga0070699_100236411 3300005518 Bacteria 1630
14 Ga0070696_100007687 3300005546 Bacteria 7203
15 Ga0070665_100193977 3300005548 Bacteria 2032
16 Ga0068861_100451311 3300005719 Bacteria 1152
17 Ga0068863_100411516 3300005841 Bacteria 1324
18 Ga0068863_100588869 3300005841 Bacteria 1100
19 Ga0068862_100495282 3300005844 Bacteria 1159
20 Ga0068862_100620510 3300005844 Bacteria 1040
21 Ga0075428_100017983 3300006844 Bacteria 7811
22 Ga0111539_10010935 3300009094 Bacteria 11423
23 Ga0111539_10044283 3300009094 Bacteria 5333
24 Ga0111539_10180436 3300009094 Bacteria 2466
25 Ga0114129_10230185 3300009147 Bacteria 2496
26 Ga0105248_10026511 3300009177 Bacteria 6447
27 Ga0105248_10107764 3300009177 Bacteria 3142
28 Ga0105249_10042205 3300009553 Bacteria 4148
29 Ga0105249_10054189 3300009553 Bacteria 3667
30 Ga0157371_10009411 3300013102 Bacteria 7692
31 Ga0157378_10078458 3300013297 Bacteria 2979
32 Ga0163162_10546539 3300013306 Bacteria 1287
33 Ga0157372_10071380 3300013307 Bacteria 3910
34 Ga0157372_10881859 3300013307 Bacteria 1038
35 Ga0163163_10031269 3300014325 Bacteria 5137
36 Ga0163163_10089067 3300014325 Bacteria 3098
37 Ga0157380_10361814 3300014326 Bacteria 1362
38 Ga0157377_10377331 3300014745 Bacteria 959
39 Ga0163161_10011579 3300017792 Bacteria 6122
40 Ga0163161_10472811 3300017792 Bacteria 1016
41 Ga0209677_101932 3300025253 Bacteria 8283
42 Ga0207688_10159444 3300025901 Bacteria 1336
43 Ga0207684_10776704 3300025910 Bacteria 811
44 Ga0207681_10355961 3300025923 Bacteria 1173
45 Ga0207664_10227686 3300025929 Bacteria 1619
46 Ga0207711_10000649 3300025941 Bacteria 34680
47 Ga0207712_10103724 3300025961 Bacteria 2119
48 Ga0207712_10238092 3300025961 Bacteria 1465
49 Ga0207677_10406097 3300026023 Bacteria 1156
50 Ga0207677_10575094 3300026023 Unclassified 985
51 Ga0207678_10630094 3300026067 Bacteria 941
52 Ga0207641_10311369 3300026088 Bacteria 1490
53 Ga0268266_10782992 3300028379 Bacteria 921
54 Ga0307405_10060233 3300031731 Bacteria 2395
55 Ga0307413_10250352 3300031824 Bacteria 1314
56 Ga0307410_10435959 3300031852 Bacteria 1066
57 Ga0307414_10128034 3300032004 Bacteria 1965
58 Ga0373932_0249972 3300035112 Bacteria 647
59 Ga0451793_0255689 3300041452 Bacteria 1001
60 Ga0451797_0024789 3300041453 Bacteria 848
61 Ga0451795_0469152 3300041456 Bacteria 1025
62 Ga0451843_0643336 3300041509 Bacteria 803
63 Ga0495638_0003151 3300046460 Bacteria 13053
64 Ga0495605_0091787 3300046474 Bacteria 1406
65 Ga0495583_0000134 3300046506 Bacteria 124077
66 Ga0495583_0117246 3300046506 Bacteria 1123
67 Ga0495616_0098699 3300046513 Bacteria 1372
68 Ga0495648_0191192 3300046524 Bacteria 1032
69 Ga0495640_0053934 3300046533 Bacteria 2756
70 Ga0495625_0002974 3300046660 Bacteria 17589
71 Ga0495625_0031125 3300046660 Bacteria 3972
72 Ga0495669_0272234 3300046684 Bacteria 814
73 Ga0495613_0135540 3300046689 Bacteria 1762
74 Ga0495670_0017935 3300046691 Bacteria 3486
75 Ga0495670_0406233 3300046691 Bacteria 736
76 Ga0495649_0027594 3300046694 Bacteria 3149
77 Ga0495581_0132943 3300047315 Bacteria 1450
78 Ga0495680_0105601 3300047322 Bacteria 2094
79 Ga0495683_0018678 3300047323 Bacteria 3582
80 Ga0495686_0103495 3300047472 Bacteria 1715
81 Ga0496102_0053194 3300048905 Bacteria 3692
82 Ga0496109_0199941 3300048912 Bacteria 1878
83 Ga0496110_0206534 3300048913 Bacteria 1785
84 Ga0496111_0113978 3300048914 Bacteria 1993
85 Ga0496112_0054675 3300048915 Bacteria 3923
86 Ga0496113_0005111 3300048916 Bacteria 8151
87 Ga0496113_0713472 3300048916 Bacteria 800
88 Ga0496116_0001442 3300048919 Bacteria 26685
89 Ga0496117_0026983 3300048920 Bacteria 4484
90 Ga0496121_0090644 3300048924 Bacteria 2389
91 Ga0496122_0020903 3300048925 Bacteria 5884
92 Ga0496123_0030399 3300048926 Bacteria 3953
93 Ga0496124_0175461 3300048927 Bacteria 1655
94 Ga0496124_0275482 3300048927 Bacteria 1230
95 Ga0501291_004875 3300049514 Bacteria 1730
96 Ga0501041_0068840 3300049577 Bacteria 2170
97 Ga0501047_0285024 3300049581 Bacteria 1496
98 nmdc:mga05p37_1105069_c1 3300050507 Bacteria 830
99 nmdc:mga05p37_538737_c1 3300050507 Bacteria 1331
100 nmdc:mga08y16_1267796_c1 3300050511 Bacteria 705
101 nmdc:mga08y16_626737_c1 3300050511 Bacteria 1082
102 Ga0500641_0145374 3300053096 Bacteria 1024
103 Ga0500556_0000018 3300053104 Bacteria 188459
104 Ga0500655_068545 3300053133 Bacteria 721
105 Ga0500658_0001744 3300053134 Bacteria 8581
106 Ga0500616_0152204 3300053153 Bacteria 1069
107 Ga0500636_0118717 3300053177 Bacteria 1486
108 Ga0500645_036711 3300053730 Bacteria 1457

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300053133 Ga0500655_068545 Ga0500655_068545_84_689 200
2 3300035112 Ga0373932_0249972 Ga0373932_0249972_11_619 201
3 3300046691 Ga0495670_0406233 Ga0495670_0406233_106_711 201
4 3300047315 Ga0495581_0132943 Ga0495581_0132943_815_1423 201
5 3300048905 Ga0496102_0053194 Ga0496102_0053194_868_1476 201
6 3300048914 Ga0496111_0113978 Ga0496111_0113978_701_1309 201
7 3300050507 nmdc:mga05p37_1105069_c1 nmdc:mga05p37_1105069_c1_134_742 201
8 3300013306 Ga0163162_10546539 Ga0163162_105465392 203
9 3300005435 Ga0070714_100299544 Ga0070714_1002995442 212
10 3300013307 Ga0157372_10071380 Ga0157372_100713806 212
11 3300013307 Ga0157372_10881859 Ga0157372_108818592 212
12 3300017792 Ga0163161_10011579 Ga0163161_100115795 212
13 3300025929 Ga0207664_10227686 Ga0207664_102276863 212
14 3300031824 Ga0307413_10250352 Ga0307413_102503522 212
15 3300032004 Ga0307414_10128034 Ga0307414_101280343 212
16 3300041453 Ga0451797_0024789 Ga0451797_0024789_176_823 212
17 3300041456 Ga0451795_0469152 Ga0451795_0469152_304_951 212
18 3300041509 Ga0451843_0643336 Ga0451843_0643336_61_708 212
19 iso_pu_bacteria 2562617112 2563057486 212
20 iso_pu_bacteria 2711768613 2713473818 212
21 iso_pu_bacteria 2904615490 2904622665 212
22 3300031852 Ga0307410_10435959 Ga0307410_104359592 213
23 3300053104 Ga0500556_0000018 Ga0500556_0000018_27647_28294 214
24 3300053730 Ga0500645_036711 Ga0500645_036711_542_1189 214
25 iso_pu_bacteria 2808606384 2808970915 214
26 iso_pu_bacteria 2808606390 2809005746 214
27 iso_pu_bacteria 2808606391 2809012497 214
28 iso_pu_bacteria 2818991467 2819717793 214
29 iso_pu_bacteria 2895395659 2895396803 214
30 3300005436 Ga0070713_100930234 Ga0070713_1009302341 215
31 3300025253 Ga0209677_101932 Ga0209677_1019322 215
32 3300050511 nmdc:mga08y16_1267796_c1 nmdc:mga08y16_1267796_c1_21_671 215
33 3300005347 Ga0070668_100397578 Ga0070668_1003975782 216
34 3300005367 Ga0070667_100329396 Ga0070667_1003293961 216
35 3300005445 Ga0070708_100702483 Ga0070708_1007024831 216
36 3300005455 Ga0070663_100167856 Ga0070663_1001678562 216
37 3300005518 Ga0070699_100008393 Ga0070699_1000083939 216
38 3300005548 Ga0070665_100193977 Ga0070665_1001939772 216
39 3300005719 Ga0068861_100451311 Ga0068861_1004513112 216
40 3300005841 Ga0068863_100411516 Ga0068863_1004115162 216
41 3300005844 Ga0068862_100495282 Ga0068862_1004952822 216
42 3300005844 Ga0068862_100620510 Ga0068862_1006205102 216
43 3300009094 Ga0111539_10010935 Ga0111539_1001093510 216
44 3300009177 Ga0105248_10107764 Ga0105248_101077643 216
45 3300009553 Ga0105249_10042205 Ga0105249_100422056 216
46 3300009553 Ga0105249_10054189 Ga0105249_100541895 216
47 3300014325 Ga0163163_10089067 Ga0163163_100890673 216
48 3300025901 Ga0207688_10159444 Ga0207688_101594442 216
49 3300025961 Ga0207712_10103724 Ga0207712_101037242 216
50 3300025961 Ga0207712_10238092 Ga0207712_102380922 216
51 3300028379 Ga0268266_10782992 Ga0268266_107829922 216
52 3300046474 Ga0495605_0091787 Ga0495605_0091787_156_809 216
53 3300046506 Ga0495583_0000134 Ga0495583_0000134_24283_24936 216
54 3300046513 Ga0495616_0098699 Ga0495616_0098699_511_1164 216
55 3300046524 Ga0495648_0191192 Ga0495648_0191192_305_958 216
56 3300046533 Ga0495640_0053934 Ga0495640_0053934_1795_2448 216
57 3300046684 Ga0495669_0272234 Ga0495669_0272234_23_676 216
58 3300046689 Ga0495613_0135540 Ga0495613_0135540_916_1569 216
59 3300046694 Ga0495649_0027594 Ga0495649_0027594_1348_2001 216
60 3300047322 Ga0495680_0105601 Ga0495680_0105601_412_1065 216
61 3300047323 Ga0495683_0018678 Ga0495683_0018678_1226_1879 216
62 3300048915 Ga0496112_0054675 Ga0496112_0054675_3059_3712 216
63 3300048916 Ga0496113_0005111 Ga0496113_0005111_4116_4769 216
64 3300048919 Ga0496116_0001442 Ga0496116_0001442_13235_13888 216
65 3300048927 Ga0496124_0275482 Ga0496124_0275482_321_986 216
66 3300014326 Ga0157380_10361814 Ga0157380_103618143 217
67 3300017792 Ga0163161_10472811 Ga0163161_104728111 217
68 3300048927 Ga0496124_0175461 Ga0496124_0175461_471_1127 217
69 3300049514 Ga0501291_004875 Ga0501291_004875_936_1592 217
70 3300005445 Ga0070708_100007934 Ga0070708_1000079349 218
71 3300005455 Ga0070663_100363711 Ga0070663_1003637111 218
72 3300005467 Ga0070706_100964116 Ga0070706_1009641161 218
73 3300005471 Ga0070698_100111604 Ga0070698_1001116043 218
74 3300005518 Ga0070699_100236411 Ga0070699_1002364113 218
75 3300005546 Ga0070696_100007687 Ga0070696_1000076872 218
76 3300005841 Ga0068863_100588869 Ga0068863_1005888692 218
77 3300006844 Ga0075428_100017983 Ga0075428_1000179837 218
78 3300009094 Ga0111539_10044283 Ga0111539_100442832 218
79 3300009094 Ga0111539_10180436 Ga0111539_101804362 218
80 3300009147 Ga0114129_10230185 Ga0114129_102301853 218
81 3300009177 Ga0105248_10026511 Ga0105248_100265113 218
82 3300013102 Ga0157371_10009411 Ga0157371_100094113 218
83 3300014325 Ga0163163_10031269 Ga0163163_100312697 218
84 3300014745 Ga0157377_10377331 Ga0157377_103773311 218
85 3300025910 Ga0207684_10776704 Ga0207684_107767041 218
86 3300025923 Ga0207681_10355961 Ga0207681_103559612 218
87 3300025941 Ga0207711_10000649 Ga0207711_100006494 218
88 3300026023 Ga0207677_10575094 Ga0207677_105750941 218
89 3300026067 Ga0207678_10630094 Ga0207678_106300941 218
90 3300026088 Ga0207641_10311369 Ga0207641_103113692 218
91 3300031731 Ga0307405_10060233 Ga0307405_100602332 218
92 3300046506 Ga0495583_0117246 Ga0495583_0117246_59_736 218
93 3300048912 Ga0496109_0199941 Ga0496109_0199941_372_1046 218
94 3300048913 Ga0496110_0206534 Ga0496110_0206534_972_1646 218
95 3300048916 Ga0496113_0713472 Ga0496113_0713472_98_757 218
96 3300048920 Ga0496117_0026983 Ga0496117_0026983_2172_2831 218
97 3300048925 Ga0496122_0020903 Ga0496122_0020903_4431_5090 218
98 3300048926 Ga0496123_0030399 Ga0496123_0030399_2084_2743 218
99 3300049577 Ga0501041_0068840 Ga0501041_0068840_1338_2102 218
100 3300049581 Ga0501047_0285024 Ga0501047_0285024_824_1483 218
101 3300050507 nmdc:mga05p37_538737_c1 nmdc:mga05p37_538737_c1_605_1264 218
102 3300050511 nmdc:mga08y16_626737_c1 nmdc:mga08y16_626737_c1_203_862 218
103 3300005338 Ga0068868_100196416 Ga0068868_1001964162 219
104 3300013297 Ga0157378_10078458 Ga0157378_100784581 219
105 3300026023 Ga0207677_10406097 Ga0207677_104060972 219
106 3300041452 Ga0451793_0255689 Ga0451793_0255689_218_877 219
107 3300046460 Ga0495638_0003151 Ga0495638_0003151_4058_4717 219
108 3300046660 Ga0495625_0002974 Ga0495625_0002974_10588_11247 219
109 3300046660 Ga0495625_0031125 Ga0495625_0031125_1385_2044 219
110 3300046691 Ga0495670_0017935 Ga0495670_0017935_2171_2830 219
111 3300047472 Ga0495686_0103495 Ga0495686_0103495_228_887 219
112 3300048924 Ga0496121_0090644 Ga0496121_0090644_754_1413 219
113 3300053096 Ga0500641_0145374 Ga0500641_0145374_193_852 219
114 3300053134 Ga0500658_0001744 Ga0500658_0001744_1688_2347 219
115 3300053153 Ga0500616_0152204 Ga0500616_0152204_16_675 219
116 3300053177 Ga0500636_0118717 Ga0500636_0118717_222_887 219

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02798

GST_N

Glutathione S-transferase, N-terminal domain

24

97

0.95

PF13409

GST_N_2

Glutathione S-transferase, N-terminal domain

33

99

0.93

PF13410

GST_C_2

Glutathione S-transferase, C-terminal domain

148

213

0.91

PF13417

GST_N_3

Glutathione S-transferase, N-terminal domain

28

104

0.91

PF00043

GST_C

Glutathione S-transferase, C-terminal domain

124

218

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
3zmk-assembly1.cif.gz_C anopheles funestus glutathione-s-transferase epsilon 2 (gste2) protein structure from different alelles: a single amino acid change confers high level of ddt resistance and cross resistance to permethrin in a major malaria vector in africa 0.8989 2 199
4mk3-assembly1.cif.gz_A-2 crystal structure of a glutathione transferase family member from cupriavidus metallidurans ch34, target efi-507362, with bound glutathione sulfinic acid (gso2h) 0.8941 4 199
3zmk-assembly1.cif.gz_A anopheles funestus glutathione-s-transferase epsilon 2 (gste2) protein structure from different alelles: a single amino acid change confers high level of ddt resistance and cross resistance to permethrin in a major malaria vector in africa 0.8907 2 199
3lyp-assembly1.cif.gz_A structure of stringent starvation protein a homolog from pseudomonas fluorescens 0.8881 3 199
3mdk-assembly1.cif.gz_A structure of stringent starvation protein a (sspa) from pseudomonas putida 0.8844 3 199
ID Description Score Start End Superfamily
af_A0A0R0GW40_137_220_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.9314 1 76 3.40.30.10
af_B6U5S1_5_83_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.9094 2 77 3.40.30.10
3totA02 Mainly Alpha;Up-down Bundle;Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2; 0.9083 82 193 1.20.1050.10
3ay8A01 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.9034 1 76 3.40.30.10
af_C6TNT2_80_213_1.20.1050.10 Mainly Alpha;Up-down Bundle;Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2; 0.8912 80 200 1.20.1050.10
ID Description Score Start End GO Terms
AF-A0A0Q5V3F2-F1-model_v4 Glutathione S-transferase 0.9865 4 219 GO:0016740
AF-A0A1V3PRV6-F1-model_v4 Glutathione S-transferase 0.9845 2 219 GO:0016740
AF-A0A4Q1HN19-F1-model_v4 Glutathione S-transferase 0.9821 1 216 GO:0016740
AF-A0A2S5MK32-F1-model_v4 Glutathione S-transferase 0.982 98 219 GO:0016740
AF-A0A528EEV3-F1-model_v4 Glutathione S-transferase family protein 0.9792 71 211 GO:0016740

Feature Viewer

pLDDT pTM Quality
96.08 0.92 High
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Predicted Structure (AlphaFold2)

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