F077856
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 114 | 79 | 113 | 115 |
Family's Representative Sequence
| Representative Sequence | 3300005577|Ga0068857_102141631|Ga0068857_1021416311 |
| Length | 137 |
| Sequence | MIPCKDNALSFRKFCRILYPKTDFMSKKHKGRPDGLVFSTNQDYYNDYQEEQTNAETLPKDKQKLRVKLDTKQRAGKVVTMVDGFVGTSDDLEALGKQLKTKCGTGGSVKDGFVMIQGDYKEKIISWLKEWGYTQTK |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2162886007 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 | Metagenome | Rhizosphere |
| 2 | 2929154850 | Filimonas sp. R-72421 Hybrid assembly | Isolate | Unclassified |
| 3 | 3300001979 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 | Metagenome | Rhizosphere |
| 4 | 3300002739 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA | Metagenome | Endosphere |
| 5 | 3300003316 | Sugarcane root Sample L1 | Metagenome | Unclassified |
| 6 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 7 | 3300003322 | Sugarcane root Sample L2 | Metagenome | Unclassified |
| 8 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 9 | 3300003354 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS | Metagenome | Endosphere |
| 10 | 3300003771 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 | Metagenome | Endosphere |
| 11 | 3300005262 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) | Metagenome | Endosphere |
| 12 | 3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) | Metagenome | Rhizosphere |
| 13 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005343 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG | Metagenome | Rhizosphere |
| 16 | 3300005365 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG | Metagenome | Rhizosphere |
| 17 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 18 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Metagenome | Rhizosphere |
| 20 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 21 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 22 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 23 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 24 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 25 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 26 | 3300006353 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 | Metagenome | Endosphere |
| 27 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 28 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 29 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 30 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 31 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 32 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 33 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 34 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 35 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 36 | 3300021384 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 | Metagenome | Unclassified |
| 37 | 3300025208 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) | Metagenome | Endosphere |
| 38 | 3300025284 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 39 | 3300025302 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 40 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300025918 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300031249 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG | Metagenome | Rhizosphere |
| 48 | 3300031250 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG | Metagenome | Rhizosphere |
| 49 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 50 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 51 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 52 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 53 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 54 | 3300042005 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 | Metagenome | Rhizosphere |
| 55 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 56 | 3300044735 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R | Metagenome | Rhizosphere |
| 57 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 58 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 59 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 60 | 3300046539 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere | Metagenome | Rhizosphere |
| 61 | 3300046558 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere | Metagenome | Rhizosphere |
| 62 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 63 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 64 | 3300047320 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere | Metagenome | Rhizosphere |
| 65 | 3300047443 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere | Metagenome | Rhizosphere |
| 66 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 67 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 68 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 69 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 70 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 71 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 72 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 73 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 74 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 75 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 76 | 3300053118 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere | Metagenome | Endosphere |
| 77 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 78 | 3300053139 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere | Metagenome | Endosphere |
| 79 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 99.12 |
| Metatranscriptomes | 0 |
| Isolates | 0.88 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 14.04 |
| Nodule | 0 |
| Rhizoplane | 2.63 |
| Rhizosphere | 66.67 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 16.67 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | SwRhRL2b_contig_1762462 | 2162886007 | Bacteria | 256265 |
| 2 | JGI24740J21852_10044961 | 3300001979 | Bacteria | 1307 |
| 3 | JGI25158J39367_1022099 | 3300002739 | Bacteria | 768 |
| 4 | rootH1_10037951 | 3300003316 | Bacteria | 3047 |
| 5 | rootH1_10078549 | 3300003316 | Bacteria | 2789 |
| 6 | rootH2_10048675 | 3300003320 | Bacteria | 2182 |
| 7 | rootH2_10049363 | 3300003320 | Bacteria | 5326 |
| 8 | rootH2_10050273 | 3300003320 | Bacteria | 10173 |
| 9 | rootH2_10114714 | 3300003320 | Bacteria | 2205 |
| 10 | rootH2_10114715 | 3300003320 | Bacteria | 2225 |
| 11 | rootH2_10143980 | 3300003320 | Bacteria | 2743 |
| 12 | rootL2_10179665 | 3300003322 | Bacteria | 1849 |
| 13 | rootH1_10013293 | 3300003323 | Bacteria | 3730 |
| 14 | rootH1_10052956 | 3300003323 | Bacteria | 7878 |
| 15 | rootH1_10330293 | 3300003323 | Bacteria | 1717 |
| 16 | JGI25160J50197_1001684 | 3300003354 | Bacteria | 10774 |
| 17 | Ga0055526_1011991 | 3300003771 | Bacteria | 3834 |
| 18 | Ga0065165_1006877 | 3300005262 | Bacteria | 5782 |
| 19 | Ga0065165_1033506 | 3300005262 | Bacteria | 1598 |
| 20 | Ga0065704_10000188 | 3300005289 | Bacteria | 267216 |
| 21 | Ga0065704_10110065 | 3300005289 | Bacteria | 1989 |
| 22 | Ga0070658_11246626 | 3300005327 | Bacteria | 646 |
| 23 | Ga0070676_10025255 | 3300005328 | Bacteria | 3355 |
| 24 | Ga0070687_100178699 | 3300005343 | Bacteria | 1269 |
| 25 | Ga0070688_101732067 | 3300005365 | Bacteria | 512 |
| 26 | Ga0068853_100792341 | 3300005539 | Bacteria | 907 |
| 27 | Ga0068853_100895093 | 3300005539 | Unclassified | 852 |
| 28 | Ga0070665_100025350 | 3300005548 | Bacteria | 5976 |
| 29 | Ga0070704_100903272 | 3300005549 | Unclassified | 794 |
| 30 | Ga0068855_100127951 | 3300005563 | Bacteria | 2903 |
| 31 | Ga0068857_100055513 | 3300005577 | Bacteria | 3515 |
| 32 | Ga0068857_100661896 | 3300005577 | Bacteria | 990 |
| 33 | Ga0068857_102141631 | 3300005577 | Bacteria | 549 |
| 34 | Ga0068854_100192367 | 3300005578 | Bacteria | 1599 |
| 35 | Ga0068856_100146715 | 3300005614 | Bacteria | 2367 |
| 36 | Ga0068856_100654682 | 3300005614 | Bacteria | 1071 |
| 37 | Ga0068860_100000394 | 3300005843 | Bacteria | 57127 |
| 38 | Ga0075366_10878785 | 3300006195 | Unclassified | 558 |
| 39 | Ga0075370_10238834 | 3300006353 | Bacteria | 1076 |
| 40 | Ga0105240_10000011 | 3300009093 | Bacteria | 523646 |
| 41 | Ga0105240_10193696 | 3300009093 | Bacteria | 2389 |
| 42 | Ga0105240_12173677 | 3300009093 | Unclassified | 576 |
| 43 | Ga0105240_12241181 | 3300009093 | Bacteria | 566 |
| 44 | Ga0105241_10333395 | 3300009174 | Bacteria | 1312 |
| 45 | Ga0105237_10088012 | 3300009545 | Bacteria | 3095 |
| 46 | Ga0105237_10343502 | 3300009545 | Bacteria | 1497 |
| 47 | Ga0105237_10629911 | 3300009545 | Bacteria | 1079 |
| 48 | Ga0105238_10223129 | 3300009551 | Unclassified | 1861 |
| 49 | Ga0105249_11677960 | 3300009553 | Bacteria | 708 |
| 50 | Ga0105239_10000122 | 3300010375 | Bacteria | 109167 |
| 51 | Ga0105239_10178524 | 3300010375 | Bacteria | 2375 |
| 52 | Ga0105239_11141310 | 3300010375 | Bacteria | 897 |
| 53 | Ga0105239_11277448 | 3300010375 | Bacteria | 847 |
| 54 | Ga0157369_11276938 | 3300013105 | Bacteria | 749 |
| 55 | Ga0157378_10043361 | 3300013297 | Bacteria | 3994 |
| 56 | Ga0157372_10001323 | 3300013307 | Bacteria | 26827 |
| 57 | Ga0157372_10025724 | 3300013307 | Bacteria | 6403 |
| 58 | Ga0213876_10002575 | 3300021384 | Bacteria | 10603 |
| 59 | Ga0209436_100091 | 3300025208 | Bacteria | 44391 |
| 60 | Ga0209436_101285 | 3300025208 | Bacteria | 8953 |
| 61 | Ga0209130_1003551 | 3300025284 | Bacteria | 6529 |
| 62 | Ga0207426_1000024 | 3300025302 | Bacteria | 534075 |
| 63 | Ga0207426_1003178 | 3300025302 | Bacteria | 9274 |
| 64 | Ga0207647_10083334 | 3300025904 | Bacteria | 1915 |
| 65 | Ga0207695_10000010 | 3300025913 | Bacteria | 981919 |
| 66 | Ga0207695_10052664 | 3300025913 | Bacteria | 4261 |
| 67 | Ga0207671_10000056 | 3300025914 | Bacteria | 186251 |
| 68 | Ga0207671_10463788 | 3300025914 | Bacteria | 1009 |
| 69 | Ga0207662_10253558 | 3300025918 | Bacteria | 1156 |
| 70 | Ga0207702_10421435 | 3300026078 | Bacteria | 1291 |
| 71 | Ga0207674_10070018 | 3300026116 | Bacteria | 3527 |
| 72 | Ga0207674_10661470 | 3300026116 | Bacteria | 1009 |
| 73 | Ga0268266_10016719 | 3300028379 | Bacteria | 6272 |
| 74 | Ga0265339_10588388 | 3300031249 | Bacteria | 511 |
| 75 | Ga0265331_10378473 | 3300031250 | Bacteria | 634 |
| 76 | Ga0265327_10000006 | 3300031251 | Bacteria | 693716 |
| 77 | Ga0265327_10005697 | 3300031251 | Bacteria | 10282 |
| 78 | Ga0265314_10193724 | 3300031711 | Bacteria | 1207 |
| 79 | Ga0265314_10631039 | 3300031711 | Bacteria | 549 |
| 80 | Ga0307516_10001546 | 3300031730 | Bacteria | 31635 |
| 81 | Ga0307414_10366111 | 3300032004 | Bacteria | 1242 |
| 82 | Ga0307414_10719617 | 3300032004 | Bacteria | 905 |
| 83 | Ga0436365_0111081 | 3300039437 | Bacteria | 39407 |
| 84 | Ga0436365_1680817 | 3300039437 | Bacteria | 1008 |
| 85 | Ga0439448_0215762 | 3300042005 | Unclassified | 674 |
| 86 | Ga0466972_0095268 | 3300044658 | Bacteria | 1410 |
| 87 | Ga0466968_0168531 | 3300044735 | Bacteria | 1014 |
| 88 | Ga0466968_0506793 | 3300044735 | Unclassified | 602 |
| 89 | Ga0466970_0089522 | 3300044765 | Bacteria | 1670 |
| 90 | Ga0466957_0253598 | 3300044842 | Bacteria | 1171 |
| 91 | Ga0466960_0387626 | 3300044901 | Bacteria | 803 |
| 92 | Ga0495621_0160609 | 3300046539 | Bacteria | 888 |
| 93 | Ga0495633_0456239 | 3300046558 | Bacteria | 577 |
| 94 | Ga0495668_0010706 | 3300046616 | Bacteria | 5539 |
| 95 | Ga0495625_0442075 | 3300046660 | Unclassified | 805 |
| 96 | Ga0495672_0074586 | 3300047320 | Bacteria | 1910 |
| 97 | Ga0495687_000058 | 3300047443 | Bacteria | 185830 |
| 98 | Ga0495686_0003280 | 3300047472 | Bacteria | 14150 |
| 99 | Ga0496102_1502133 | 3300048905 | Unclassified | 592 |
| 100 | Ga0496114_0001644 | 3300048917 | Bacteria | 16961 |
| 101 | Ga0496115_0019877 | 3300048918 | Bacteria | 5174 |
| 102 | Ga0496121_0000082 | 3300048924 | Bacteria | 228557 |
| 103 | Ga0496124_0136530 | 3300048927 | Bacteria | 1941 |
| 104 | Ga0501033_0672954 | 3300049570 | Bacteria | 706 |
| 105 | Ga0501034_0062757 | 3300049571 | Bacteria | 3731 |
| 106 | Ga0501034_0215600 | 3300049571 | Bacteria | 1873 |
| 107 | Ga0501080_0646385 | 3300049742 | Unclassified | 936 |
| 108 | Ga0501080_0759471 | 3300049742 | Bacteria | 852 |
| 109 | Ga0501044_0005264 | 3300049823 | Bacteria | 14391 |
| 110 | Ga0500594_0088613 | 3300053118 | Bacteria | 936 |
| 111 | Ga0500559_0037168 | 3300053136 | Bacteria | 2110 |
| 112 | Ga0500568_0007008 | 3300053139 | Bacteria | 5577 |
| 113 | Ga0500616_0294302 | 3300053153 | Unclassified | 677 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | iso_pu_bacteria | 2929154850 | 2929159874 | 108 |
| 2 | 3300003316 | rootH1_10037951 | rootH1_100379513 | 110 |
| 3 | 3300003320 | rootH2_10048675 | rootH2_100486754 | 110 |
| 4 | 3300003320 | rootH2_10050273 | rootH2_100502734 | 110 |
| 5 | 3300003320 | rootH2_10114714 | rootH2_101147143 | 110 |
| 6 | 3300003320 | rootH2_10114715 | rootH2_101147153 | 110 |
| 7 | 3300003320 | rootH2_10143980 | rootH2_101439802 | 110 |
| 8 | 3300003322 | rootL2_10179665 | rootL2_101796652 | 110 |
| 9 | 3300003323 | rootH1_10013293 | rootH1_100132933 | 110 |
| 10 | 3300003323 | rootH1_10330293 | rootH1_103302931 | 110 |
| 11 | 3300003354 | JGI25160J50197_1001684 | JGI25160J50197_10016847 | 110 |
| 12 | 3300003771 | Ga0055526_1011991 | Ga0055526_10119914 | 110 |
| 13 | 3300005262 | Ga0065165_1006877 | Ga0065165_10068775 | 110 |
| 14 | 3300005262 | Ga0065165_1033506 | Ga0065165_10335062 | 110 |
| 15 | 3300005539 | Ga0068853_100895093 | Ga0068853_1008950932 | 110 |
| 16 | 3300005563 | Ga0068855_100127951 | Ga0068855_1001279514 | 110 |
| 17 | 3300005843 | Ga0068860_100000394 | Ga0068860_10000039449 | 110 |
| 18 | 3300006353 | Ga0075370_10238834 | Ga0075370_102388342 | 110 |
| 19 | 3300009093 | Ga0105240_12241181 | Ga0105240_122411811 | 110 |
| 20 | 3300009174 | Ga0105241_10333395 | Ga0105241_103333952 | 110 |
| 21 | 3300009551 | Ga0105238_10223129 | Ga0105238_102231292 | 110 |
| 22 | 3300009553 | Ga0105249_11677960 | Ga0105249_116779602 | 110 |
| 23 | 3300010375 | Ga0105239_10178524 | Ga0105239_101785243 | 110 |
| 24 | 3300013307 | Ga0157372_10001323 | Ga0157372_1000132313 | 110 |
| 25 | 3300025208 | Ga0209436_101285 | Ga0209436_1012857 | 110 |
| 26 | 3300025302 | Ga0207426_1003178 | Ga0207426_10031788 | 110 |
| 27 | 3300025904 | Ga0207647_10083334 | Ga0207647_100833343 | 110 |
| 28 | 3300031250 | Ga0265331_10378473 | Ga0265331_103784731 | 110 |
| 29 | 3300031251 | Ga0265327_10005697 | Ga0265327_100056975 | 110 |
| 30 | 3300042005 | Ga0439448_0215762 | Ga0439448_0215762_259_597 | 110 |
| 31 | 3300046660 | Ga0495625_0442075 | Ga0495625_0442075_80_421 | 110 |
| 32 | 3300047443 | Ga0495687_000058 | Ga0495687_000058_84993_85334 | 110 |
| 33 | 3300048917 | Ga0496114_0001644 | Ga0496114_0001644_14929_15264 | 110 |
| 34 | 3300048924 | Ga0496121_0000082 | Ga0496121_0000082_166322_166657 | 110 |
| 35 | 3300053139 | Ga0500568_0007008 | Ga0500568_0007008_5191_5532 | 110 |
| 36 | 3300053153 | Ga0500616_0294302 | Ga0500616_0294302_160_501 | 110 |
| 37 | 3300002739 | JGI25158J39367_1022099 | JGI25158J39367_10220991 | 111 |
| 38 | 3300003320 | rootH2_10049363 | rootH2_100493636 | 111 |
| 39 | 3300003323 | rootH1_10052956 | rootH1_100529568 | 111 |
| 40 | 3300005327 | Ga0070658_11246626 | Ga0070658_112466261 | 111 |
| 41 | 3300005328 | Ga0070676_10025255 | Ga0070676_100252554 | 111 |
| 42 | 3300005539 | Ga0068853_100792341 | Ga0068853_1007923411 | 111 |
| 43 | 3300005577 | Ga0068857_100055513 | Ga0068857_1000555134 | 111 |
| 44 | 3300025208 | Ga0209436_100091 | Ga0209436_10009137 | 111 |
| 45 | 3300025284 | Ga0209130_1003551 | Ga0209130_10035516 | 111 |
| 46 | 3300025302 | Ga0207426_1000024 | Ga0207426_1000024389 | 111 |
| 47 | 3300026116 | Ga0207674_10070018 | Ga0207674_100700183 | 111 |
| 48 | 3300031730 | Ga0307516_10001546 | Ga0307516_1000154621 | 111 |
| 49 | 3300044658 | Ga0466972_0095268 | Ga0466972_0095268_517_855 | 111 |
| 50 | 3300044735 | Ga0466968_0168531 | Ga0466968_0168531_202_537 | 111 |
| 51 | 3300044842 | Ga0466957_0253598 | Ga0466957_0253598_280_618 | 111 |
| 52 | 3300046616 | Ga0495668_0010706 | Ga0495668_0010706_1671_2009 | 111 |
| 53 | 3300047472 | Ga0495686_0003280 | Ga0495686_0003280_12479_12817 | 111 |
| 54 | 3300053118 | Ga0500594_0088613 | Ga0500594_0088613_492_830 | 111 |
| 55 | 2162886007 | SwRhRL2b_contig_1762462 | SwRhRL2b_0592.00002080 | 112 |
| 56 | 3300001979 | JGI24740J21852_10044961 | JGI24740J21852_100449612 | 112 |
| 57 | 3300003316 | rootH1_10078549 | rootH1_100785492 | 112 |
| 58 | 3300005289 | Ga0065704_10000188 | Ga0065704_1000018812 | 112 |
| 59 | 3300005289 | Ga0065704_10110065 | Ga0065704_101100653 | 112 |
| 60 | 3300005343 | Ga0070687_100178699 | Ga0070687_1001786991 | 112 |
| 61 | 3300005365 | Ga0070688_101732067 | Ga0070688_1017320671 | 112 |
| 62 | 3300005548 | Ga0070665_100025350 | Ga0070665_1000253509 | 112 |
| 63 | 3300005549 | Ga0070704_100903272 | Ga0070704_1009032721 | 112 |
| 64 | 3300005577 | Ga0068857_100661896 | Ga0068857_1006618962 | 112 |
| 65 | 3300005577 | Ga0068857_102141631 | Ga0068857_1021416311 | 112 |
| 66 | 3300005578 | Ga0068854_100192367 | Ga0068854_1001923673 | 112 |
| 67 | 3300005614 | Ga0068856_100146715 | Ga0068856_1001467151 | 112 |
| 68 | 3300005614 | Ga0068856_100654682 | Ga0068856_1006546823 | 112 |
| 69 | 3300006195 | Ga0075366_10878785 | Ga0075366_108787851 | 112 |
| 70 | 3300009093 | Ga0105240_10000011 | Ga0105240_1000001197 | 112 |
| 71 | 3300009093 | Ga0105240_10193696 | Ga0105240_101936962 | 112 |
| 72 | 3300009093 | Ga0105240_12173677 | Ga0105240_121736772 | 112 |
| 73 | 3300009545 | Ga0105237_10088012 | Ga0105237_100880124 | 112 |
| 74 | 3300009545 | Ga0105237_10343502 | Ga0105237_103435022 | 112 |
| 75 | 3300009545 | Ga0105237_10629911 | Ga0105237_106299112 | 112 |
| 76 | 3300010375 | Ga0105239_10000122 | Ga0105239_1000012266 | 112 |
| 77 | 3300010375 | Ga0105239_11141310 | Ga0105239_111413102 | 112 |
| 78 | 3300010375 | Ga0105239_11277448 | Ga0105239_112774481 | 112 |
| 79 | 3300013105 | Ga0157369_11276938 | Ga0157369_112769382 | 112 |
| 80 | 3300013297 | Ga0157378_10043361 | Ga0157378_100433615 | 112 |
| 81 | 3300013307 | Ga0157372_10025724 | Ga0157372_100257243 | 112 |
| 82 | 3300021384 | Ga0213876_10002575 | Ga0213876_100025758 | 112 |
| 83 | 3300025913 | Ga0207695_10000010 | Ga0207695_10000010485 | 112 |
| 84 | 3300025913 | Ga0207695_10052664 | Ga0207695_100526645 | 112 |
| 85 | 3300025914 | Ga0207671_10000056 | Ga0207671_10000056166 | 112 |
| 86 | 3300025914 | Ga0207671_10463788 | Ga0207671_104637882 | 112 |
| 87 | 3300025918 | Ga0207662_10253558 | Ga0207662_102535581 | 112 |
| 88 | 3300026078 | Ga0207702_10421435 | Ga0207702_104214352 | 112 |
| 89 | 3300026116 | Ga0207674_10661470 | Ga0207674_106614702 | 112 |
| 90 | 3300028379 | Ga0268266_10016719 | Ga0268266_100167199 | 112 |
| 91 | 3300031249 | Ga0265339_10588388 | Ga0265339_105883881 | 112 |
| 92 | 3300031251 | Ga0265327_10000006 | Ga0265327_10000006319 | 112 |
| 93 | 3300031711 | Ga0265314_10193724 | Ga0265314_101937243 | 112 |
| 94 | 3300031711 | Ga0265314_10631039 | Ga0265314_106310391 | 112 |
| 95 | 3300032004 | Ga0307414_10366111 | Ga0307414_103661112 | 112 |
| 96 | 3300032004 | Ga0307414_10719617 | Ga0307414_107196172 | 112 |
| 97 | 3300039437 | Ga0436365_0111081 | Ga0436365_0111081_23243_23587 | 112 |
| 98 | 3300039437 | Ga0436365_1680817 | Ga0436365_1680817_240_584 | 112 |
| 99 | 3300044735 | Ga0466968_0506793 | Ga0466968_0506793_218_586 | 112 |
| 100 | 3300044765 | Ga0466970_0089522 | Ga0466970_0089522_443_784 | 112 |
| 101 | 3300044901 | Ga0466960_0387626 | Ga0466960_0387626_285_635 | 112 |
| 102 | 3300046539 | Ga0495621_0160609 | Ga0495621_0160609_171_509 | 112 |
| 103 | 3300046558 | Ga0495633_0456239 | Ga0495633_0456239_170_547 | 112 |
| 104 | 3300047320 | Ga0495672_0074586 | Ga0495672_0074586_609_953 | 112 |
| 105 | 3300048905 | Ga0496102_1502133 | Ga0496102_1502133_110_520 | 112 |
| 106 | 3300048918 | Ga0496115_0019877 | Ga0496115_0019877_2632_2973 | 112 |
| 107 | 3300048927 | Ga0496124_0136530 | Ga0496124_0136530_663_1007 | 112 |
| 108 | 3300049570 | Ga0501033_0672954 | Ga0501033_0672954_235_585 | 112 |
| 109 | 3300049571 | Ga0501034_0062757 | Ga0501034_0062757_1999_2349 | 112 |
| 110 | 3300049571 | Ga0501034_0215600 | Ga0501034_0215600_912_1256 | 112 |
| 111 | 3300049742 | Ga0501080_0646385 | Ga0501080_0646385_518_862 | 112 |
| 112 | 3300049742 | Ga0501080_0759471 | Ga0501080_0759471_203_553 | 112 |
| 113 | 3300049823 | Ga0501044_0005264 | Ga0501044_0005264_4484_4834 | 112 |
| 114 | 3300053136 | Ga0500559_0037168 | Ga0500559_0037168_1617_1964 | 112 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Predicted Structure (AlphaFold2)
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