F065755

General Info

Members Datasets Scaffolds Average Seq Length
111 90 104 972

Family's Representative Sequence

Representative Sequence 3300046674|Ga0495588_0000165|Ga0495588_0000165_31978_35052
Length 1024
Sequence MSSAGEQFVGRYRGASSLGKNEEENLMVKRSFALLLLCFGVLLALPTFAVADTGDVVEPQHEPATSGDGFQSGVCYENQVEEDPTKTDTTKPFCSAETPDLFFTQAGGHPPFAFDQYIIRHETTVPGVVEPLIEPYEDRVLKTERVDLPVGFTEDPQSSPQCSNEDFEAIGEIPGSGGQMGRVPKCDPSTIVGRNETWLVVNTANAVPVPGAPPGNFLPRGYVIPPQAAKGSRVAVYNLEPKFGEPARLGFIIGFSKVIVLEGGVAWESDFHEYFTIHLPPPSVGVSSLRSRLVAFGQSGDGTHVTLPTTCYDPNELPDPYSTWFRGESWGEPNPTFPEGSTPWQAKLPPGVRTTGCESVPFDPSLEVDAGTNNVDSPAPATVTTRMPFDPAKEGGEVRSGATEGISQSHVRKAEVSLPQGMGINPSGAQGLVACSDGQFKKGVRTYENECPEGSDIGTVEVESPPLSEPLVGDVYVGEQMGNDPESGDLYRILLEAKSEAEGIDARLVGHVKANKVTGALTAVIDDQLTGEFAGKLPSGLPQVPFEEIRVHFDGSKEVLTSPPVCSATGTSRFEPWARPGELAPASSTVTLSTDPTGGACPKTMAERKFTPTYKAHTDSNQAGAFTPFHVRIGRRDGEQELKLVDVTLPKGLTGRLAGIPYCPESAIAAATANSGQAERDKSSCPLGTGIGKVTTESGTGAHPLTLQGLAFLAGPYKGAPISMVTVTPAVAGPFDLGTVVVRVALNVNPDTAQIHAVSDVIPDVYGGAKLDLRSIDLAIDKERFMLTPTNCDAQATTGDINGGGGDPTDPAAFSAYAVNDPFQATGCDTLAFKPSLRVQLFGPTTRNKFPRLKAELKARSGDANIARTALTMPHSLFLEQGHIGTVCTRPQLAAHTCPEASVYGNAFARSPLLDEKLQGKVYLVSSDHKLPDLLVDLRGQVEIYLRGVIGSKHGGLKTVFNNTPDVPVSKFVLNMKGGKKGLLVNSQDTCKKKQRAVLNIKGQNGKQVKKNKFKLNIVSCGKK

Samples

Sample ID Description Type Environment
1 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
2 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
3 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
4 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
5 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
6 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
7 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
8 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
12 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
13 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
14 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
15 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
16 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
17 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
18 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
19 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
20 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
21 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
22 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
23 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
24 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
25 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
26 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
27 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
28 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
29 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
30 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
31 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
32 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
33 3300020075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
34 3300020610 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
35 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
56 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
57 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
58 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
59 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
60 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
61 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
62 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
63 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
64 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
65 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
66 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
67 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
68 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
69 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
70 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
71 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
72 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
73 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
74 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
75 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
76 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
77 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
78 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
79 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
80 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
81 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
82 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
83 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
84 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
85 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
86 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
87 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
88 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
89 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
90 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.4
Metatranscriptomes 3.6
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.9
Nodule 0
Rhizoplane 7.21
Rhizosphere 91.89
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070683_100000336 3300005329 Bacteria 32282
2 Ga0070683_100000619 3300005329 Bacteria 25554
3 Ga0070682_100000045 3300005337 Bacteria 131960
4 Ga0068868_100003415 3300005338 Bacteria 11053
5 Ga0070691_10000230 3300005341 Bacteria 19043
6 Ga0070661_100000023 3300005344 Bacteria 123104
7 Ga0070668_100025217 3300005347 Unclassified 4507
8 Ga0070675_100000111 3300005354 Bacteria 47699
9 Ga0070688_100000068 3300005365 Bacteria 50778
10 Ga0070659_100003986 3300005366 Bacteria 10509
11 Ga0070713_100000325 3300005436 Bacteria 31202
12 Ga0070678_100002133 3300005456 Bacteria 10729
13 Ga0070685_10000364 3300005466 Bacteria 27523
14 Ga0070684_100001455 3300005535 Bacteria 17079
15 Ga0070684_100012539 3300005535 Bacteria 6800
16 Ga0070672_100000015 3300005543 Bacteria 72591
17 Ga0068854_100000136 3300005578 Bacteria 51080
18 Ga0068856_100000757 3300005614 Bacteria 35080
19 Ga0068852_100000184 3300005616 Bacteria 42515
20 Ga0068852_100049824 3300005616 Bacteria 3585
21 Ga0068851_10005746 3300005834 Bacteria 5647
22 Ga0081539_10000791 3300005985 Bacteria 61600
23 Ga0070712_100004494 3300006175 Bacteria 8612
24 Ga0075430_100020074 3300006846 Bacteria 5687
25 Ga0068865_100000165 3300006881 Bacteria 36517
26 Ga0105245_10014976 3300009098 Bacteria 6756
27 Ga0105247_10000393 3300009101 Bacteria 37140
28 Ga0105243_10003412 3300009148 Bacteria 12879
29 Ga0105248_10000008 3300009177 Bacteria 403910
30 Ga0105239_10085413 3300010375 Unclassified 3478
31 Ga0157378_10002995 3300013297 Bacteria 15012
32 Ga0157378_10005465 3300013297 Bacteria 11132
33 Ga0157372_10000129 3300013307 Bacteria 82491
34 Ga0157375_10001152 3300013308 Bacteria 22842
35 Ga0157380_10000132 3300014326 Bacteria 41696
36 Ga0206356_10525859 3300020070 Bacteria 3303
37 Ga0206356_11741586 3300020070 Unclassified 3472
38 Ga0206349_1733941 3300020075 Unclassified 3776
39 Ga0154015_1579380 3300020610 Bacteria 3808
40 Ga0207656_10004422 3300025321 Bacteria 4907
41 Ga0207710_10000195 3300025900 Bacteria 57216
42 Ga0207693_10008042 3300025915 Bacteria 8658
43 Ga0207649_10000523 3300025920 Bacteria 26930
44 Ga0207659_10000010 3300025926 Bacteria 286639
45 Ga0207687_10002500 3300025927 Bacteria 12481
46 Ga0207700_10000081 3300025928 Bacteria 59083
47 Ga0207690_10009987 3300025932 Bacteria 5637
48 Ga0207704_10000093 3300025938 Bacteria 52224
49 Ga0207691_10000044 3300025940 Bacteria 100027
50 Ga0207711_10000006 3300025941 Bacteria 792692
51 Ga0207661_10000224 3300025944 Bacteria 36954
52 Ga0207661_10000262 3300025944 Bacteria 33960
53 Ga0207668_10002989 3300025972 Bacteria 9908
54 Ga0207640_10000015 3300025981 Bacteria 215411
55 Ga0207677_10003991 3300026023 Bacteria 7870
56 Ga0207702_10000060 3300026078 Bacteria 125473
57 Ga0207702_10022437 3300026078 Bacteria 5233
58 Ga0207641_10005436 3300026088 Bacteria 10874
59 Ga0207683_10044777 3300026121 Bacteria 3869
60 Ga0207698_10000012 3300026142 Bacteria 260061
61 Ga0268266_10014316 3300028379 Bacteria 6821
62 Ga0307415_100020578 3300032126 Bacteria 4032
63 Ga0466967_0000009 3300045976 Bacteria 122610
64 Ga0495629_0000272 3300046459 Bacteria 44883
65 Ga0495629_0004323 3300046459 Bacteria 10654
66 Ga0495594_0000003 3300046499 Bacteria 199267
67 Ga0495606_0000752 3300046507 Bacteria 50099
68 Ga0495608_0000068 3300046511 Bacteria 79694
69 Ga0495628_0000891 3300046516 Bacteria 27515
70 Ga0495630_0000056 3300046517 Bacteria 91477
71 Ga0495587_0003083 3300046536 Bacteria 11132
72 Ga0495645_0011811 3300046543 Bacteria 6153
73 Ga0495622_0000133 3300046557 Bacteria 63562
74 Ga0495634_0000247 3300046642 Bacteria 50931
75 Ga0495625_0000696 3300046660 Bacteria 47763
76 Ga0495635_0009660 3300046663 Bacteria 6746
77 Ga0495588_0000165 3300046674 Bacteria 85841
78 Ga0495657_0000004 3300046675 Bacteria 266465
79 Ga0495647_0000631 3300046681 Bacteria 10396
80 Ga0495613_0000113 3300046689 Bacteria 79559
81 Ga0495624_0000267 3300046690 Bacteria 41318
82 Ga0495604_0000126 3300047317 Bacteria 63992
83 Ga0495604_0001310 3300047317 Bacteria 20341
84 Ga0495675_0000107 3300047444 Bacteria 59970
85 Ga0495602_0000208 3300048088 Bacteria 54818
86 Ga0495602_0000533 3300048088 Bacteria 35335
87 Ga0496102_0000039 3300048905 Bacteria 198306
88 Ga0496103_0000008 3300048906 Bacteria 340474
89 Ga0496108_0000062 3300048911 Bacteria 122391
90 Ga0496108_0002109 3300048911 Bacteria 15927
91 Ga0496109_0000007 3300048912 Bacteria 247554
92 Ga0496109_0000129 3300048912 Bacteria 77469
93 Ga0496114_0000014 3300048917 Bacteria 297902
94 Ga0496115_0000125 3300048918 Bacteria 69936
95 Ga0501042_0022863 3300049578 Unclassified 4368
96 Ga0501070_0012855 3300049586 Bacteria 7054
97 nmdc:mga0qj67_13351_c1 3300050509 Bacteria 6199
98 Ga0495601_0000013 3300053077 Bacteria 226476
99 Ga0495601_0024863 3300053077 Bacteria 3689
100 Ga0495612_0011547 3300053078 Bacteria 3558
101 Ga0495595_0000003 3300053084 Bacteria 266465
102 Ga0495619_0000031 3300053085 Bacteria 145508
103 Ga0495619_0000106 3300053085 Bacteria 62413
104 Ga0500566_0024094 3300053094 Bacteria 3574

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046459 Ga0495629_0004323 Ga0495629_0004323_1118_3829 862
2 3300053094 Ga0500566_0024094 Ga0500566_0024094_553_3264 862
3 3300005985 Ga0081539_10000791 Ga0081539_1000079132 866
4 3300046536 Ga0495587_0003083 Ga0495587_0003083_74_2839 869
5 3300048905 Ga0496102_0000039 Ga0496102_0000039_130437_133184 871
6 3300048906 Ga0496103_0000008 Ga0496103_0000008_251692_254439 871
7 3300009101 Ga0105247_10000393 Ga0105247_1000039341 875
8 3300025900 Ga0207710_10000195 Ga0207710_1000019525 875
9 3300046516 Ga0495628_0000891 Ga0495628_0000891_16067_18859 875
10 3300048088 Ga0495602_0000533 Ga0495602_0000533_3031_5823 875
11 3300049578 Ga0501042_0022863 Ga0501042_0022863_1521_4316 876
12 3300013297 Ga0157378_10002995 Ga0157378_100029959 891
13 3300049586 Ga0501070_0012855 Ga0501070_0012855_1666_4665 892
14 3300045976 Ga0466967_0000009 Ga0466967_0000009_14531_17425 893
15 3300046499 Ga0495594_0000003 Ga0495594_0000003_139724_142549 895
16 3300046557 Ga0495622_0000133 Ga0495622_0000133_58934_61759 895
17 3300013308 Ga0157375_10001152 Ga0157375_1000115215 896
18 3300009098 Ga0105245_10014976 Ga0105245_100149762 898
19 3300026088 Ga0207641_10005436 Ga0207641_100054366 898
20 3300048917 Ga0496114_0000014 Ga0496114_0000014_221159_224014 899
21 3300048918 Ga0496115_0000125 Ga0496115_0000125_42818_45673 899
22 3300048911 Ga0496108_0000062 Ga0496108_0000062_88690_91524 901
23 3300048912 Ga0496109_0000007 Ga0496109_0000007_15314_18148 901
24 3300046642 Ga0495634_0000247 Ga0495634_0000247_16394_19255 902
25 3300009177 Ga0105248_10000008 Ga0105248_10000008396 904
26 3300025941 Ga0207711_10000006 Ga0207711_10000006791 910
27 3300046543 Ga0495645_0011811 Ga0495645_0011811_2362_5148 911
28 3300006175 Ga0070712_100004494 Ga0070712_1000044942 914
29 3300025915 Ga0207693_10008042 Ga0207693_100080422 914
30 3300025927 Ga0207687_10002500 Ga0207687_100025002 914
31 3300005329 Ga0070683_100000336 Ga0070683_1000003369 915
32 3300005535 Ga0070684_100012539 Ga0070684_1000125392 915
33 3300025944 Ga0207661_10000224 Ga0207661_100002246 915
34 3300020070 Ga0206356_11741586 Ga0206356_117415861 918
35 3300050509 nmdc:mga0qj67_13351_c1 nmdc:mga0qj67_13351_c1_2314_5247 920
36 3300005616 Ga0068852_100000184 Ga0068852_10000018424 934
37 3300006846 Ga0075430_100020074 Ga0075430_1000200744 934
38 3300026142 Ga0207698_10000012 Ga0207698_1000001215 934
39 3300014326 Ga0157380_10000132 Ga0157380_100001325 943
40 3300005344 Ga0070661_100000023 Ga0070661_10000002323 951
41 3300025920 Ga0207649_10000523 Ga0207649_1000052323 951
42 3300046681 Ga0495647_0000631 Ga0495647_0000631_2405_5389 952
43 3300048088 Ga0495602_0000533 Ga0495602_0000533_6037_8955 953
44 3300005338 Ga0068868_100003415 Ga0068868_1000034155 955
45 3300026023 Ga0207677_10003991 Ga0207677_100039913 955
46 3300046660 Ga0495625_0000696 Ga0495625_0000696_43612_46581 955
47 3300046517 Ga0495630_0000056 Ga0495630_0000056_56886_59870 960
48 3300053077 Ga0495601_0024863 Ga0495601_0024863_318_3317 961
49 3300053078 Ga0495612_0011547 Ga0495612_0011547_111_3065 961
50 3300005616 Ga0068852_100049824 Ga0068852_1000498242 962
51 3300020610 Ga0154015_1579380 Ga0154015_15793802 962
52 3300046663 Ga0495635_0009660 Ga0495635_0009660_753_3743 962
53 3300026078 Ga0207702_10022437 Ga0207702_100224372 964
54 3300046516 Ga0495628_0000891 Ga0495628_0000891_12884_15853 965
55 3300047317 Ga0495604_0000126 Ga0495604_0000126_35280_38228 965
56 3300006881 Ga0068865_100000165 Ga0068865_1000001655 969
57 3300025938 Ga0207704_10000093 Ga0207704_100000937 969
58 3300013297 Ga0157378_10005465 Ga0157378_100054653 973
59 3300009177 Ga0105248_10000008 Ga0105248_10000008395 974
60 3300025941 Ga0207711_10000006 Ga0207711_10000006790 974
61 3300005456 Ga0070678_100002133 Ga0070678_1000021335 975
62 3300026121 Ga0207683_10044777 Ga0207683_100447772 975
63 3300046690 Ga0495624_0000267 Ga0495624_0000267_32859_35846 975
64 3300048088 Ga0495602_0000208 Ga0495602_0000208_45086_48112 975
65 3300013307 Ga0157372_10000129 Ga0157372_1000012973 977
66 3300028379 Ga0268266_10014316 Ga0268266_100143164 977
67 3300005366 Ga0070659_100003986 Ga0070659_1000039865 978
68 3300005578 Ga0068854_100000136 Ga0068854_10000013625 978
69 3300025932 Ga0207690_10009987 Ga0207690_100099874 978
70 3300025981 Ga0207640_10000015 Ga0207640_1000001524 978
71 3300053077 Ga0495601_0000013 Ga0495601_0000013_122311_125319 978
72 3300005337 Ga0070682_100000045 Ga0070682_100000045126 979
73 3300005347 Ga0070668_100025217 Ga0070668_1000252172 979
74 3300025972 Ga0207668_10002989 Ga0207668_100029893 979
75 3300005436 Ga0070713_100000325 Ga0070713_10000032515 981
76 3300010375 Ga0105239_10085413 Ga0105239_100854132 981
77 3300020070 Ga0206356_10525859 Ga0206356_105258592 981
78 3300025928 Ga0207700_10000081 Ga0207700_1000008144 981
79 3300046511 Ga0495608_0000068 Ga0495608_0000068_47063_50095 981
80 3300046675 Ga0495657_0000004 Ga0495657_0000004_90812_93844 981
81 3300047317 Ga0495604_0001310 Ga0495604_0001310_11325_14354 981
82 3300047444 Ga0495675_0000107 Ga0495675_0000107_44598_47630 981
83 3300053084 Ga0495595_0000003 Ga0495595_0000003_90812_93844 981
84 3300053085 Ga0495619_0000031 Ga0495619_0000031_63364_66393 981
85 3300053085 Ga0495619_0000106 Ga0495619_0000106_12329_15361 981
86 3300005614 Ga0068856_100000757 Ga0068856_10000075726 982
87 3300026078 Ga0207702_10000060 Ga0207702_1000006051 982
88 3300046459 Ga0495629_0000272 Ga0495629_0000272_13700_16705 993
89 3300005354 Ga0070675_100000111 Ga0070675_10000011136 995
90 3300025926 Ga0207659_10000010 Ga0207659_10000010133 995
91 3300032126 Ga0307415_100020578 Ga0307415_1000205782 995
92 3300046689 Ga0495613_0000113 Ga0495613_0000113_28427_31444 996
93 3300005341 Ga0070691_10000230 Ga0070691_1000023015 997
94 3300046674 Ga0495588_0000165 Ga0495588_0000165_31978_35052 998
95 3300048911 Ga0496108_0002109 Ga0496108_0002109_173_3220 998
96 3300048912 Ga0496109_0000129 Ga0496109_0000129_35958_39005 998
97 3300005365 Ga0070688_100000068 Ga0070688_10000006814 1001
98 3300005466 Ga0070685_10000364 Ga0070685_1000036415 1001
99 3300046507 Ga0495606_0000752 Ga0495606_0000752_11685_14690 1001
100 3300005329 Ga0070683_100000619 Ga0070683_1000006198 1002
101 3300005535 Ga0070684_100001455 Ga0070684_10000145511 1002
102 3300005834 Ga0068851_10005746 Ga0068851_100057462 1002
103 3300025321 Ga0207656_10004422 Ga0207656_100044222 1002
104 3300025944 Ga0207661_10000262 Ga0207661_1000026220 1002
105 3300020075 Ga0206349_1733941 Ga0206349_17339411 1003
106 3300005543 Ga0070672_100000015 Ga0070672_10000001557 1010
107 3300009148 Ga0105243_10003412 Ga0105243_1000341210 1010
108 3300013297 Ga0157378_10002995 Ga0157378_1000299510 1010
109 3300025940 Ga0207691_10000044 Ga0207691_1000004481 1010
110 3300005329 Ga0070683_100000336 Ga0070683_1000003368 1018
111 3300025944 Ga0207661_10000224 Ga0207661_100002245 1018

Structural Annotation

Top 5 Hits

ID Description Score Start End
2dfe-assembly1.cif.gz_A crystal structure of tk-rnase hii(1-200)-c 0.6504 824 850
7me6-assembly1.cif.gz_A structure of the apo form of ycni 0.6455 826 1009
1io2-assembly1.cif.gz_A crystal structure of type 2 ribonuclease h from hyperthermophilic archaeon, thermococcus kodakaraensis kod1 0.6386 824 850
7me6-assembly1.cif.gz_A structure of the apo form of ycni 0.6291 826 1009
1x1p-assembly1.cif.gz_A crystal structure of tk-rnase hii(1-197)-a(28-42) 0.6041 824 849
ID Description Score Start End Superfamily
af_Q8IZA0_501_598_2.60.40.10 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.6378 534 582 2.60.40.10
af_E7F374_532_640_2.60.40.60 Mainly Beta;Sandwich;Immunoglobulin-like;Cadherins 0.6202 548 582 2.60.40.60
af_Q9VSC9_716_810_2.60.40.10 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.6146 535 586 2.60.40.10
af_A0A0R4II09_550_650_2.60.40.60 Mainly Beta;Sandwich;Immunoglobulin-like;Cadherins 0.611 548 582 2.60.40.60
af_Q19194_233_338_2.60.40.60 Mainly Beta;Sandwich;Immunoglobulin-like;Cadherins 0.608 547 582 2.60.40.60
ID Description Score Start End GO Terms
AF-A0A537YSS7-F1-model_v4 Uncharacterized protein 0.9584 25 1018
AF-A0A537YSS7-F1-model_v4 Uncharacterized protein 0.9565 25 1018
AF-A0A838V1S3-F1-model_v4 Uncharacterized protein 0.9327 15 1018
AF-A0A838V1S3-F1-model_v4 Uncharacterized protein 0.9258 15 1018
AF-A0A537YR47-F1-model_v4 Uncharacterized protein 0.8966 297 1018

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pLDDT pTM Quality
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Predicted Structure (AlphaFold2)

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