F063432

General Info

Members Datasets Scaffolds Average Seq Length
111 81 222 371

Family's Representative Sequence

Representative Sequence 3300006028|Ga0070717_10103894|Ga0070717_101038943
Length 395
Sequence VPSKKNGTYGNYPNCNTTEPEIHMNNPEMREKTAAQLLSAAGRVGQMSAFVGLDGFVDDILHVVDKRESAEKYVRLPTIAQYADRLAAAAGRSTNVELVSQLTKLGGNGPIMANALASFGLKVTYLGILGFPNLHPVFAEFARRAEVHSIAEPGYTDALEFEDGKIMLGKHQSLGQMNWENIKTRFGKDKFSAKFGTADLIGFVNWTMLTHMSDIWSAVLKEICPEMKGSRRKLFIDLADPEKRTSEDILRALELISAFQKHFDVILGLNEKESHEIGTNLGLATGDHTPEGLKKLCKEIHLRIRVDTLVVHPTAFALASGPDGEGMVEGPFTPKPKITTGAGDHFNSGFCLGKLLGFPTNSCLLTGVATSGFYVRTGKSPAISDVADMLRHWPS

Samples

Sample ID Description Type Environment
1 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
11 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
12 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
13 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
14 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
15 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
16 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
17 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
18 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
19 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
20 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
21 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
22 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
23 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
24 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
25 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
26 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
27 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
28 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
29 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
38 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
39 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
40 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
41 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
42 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
43 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
44 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
45 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
46 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
47 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
48 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
49 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
50 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
51 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
52 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
53 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
54 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
55 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
56 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
57 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
58 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
59 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
60 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
61 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
62 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
63 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
64 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
65 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
66 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
67 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
68 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
69 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
70 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
71 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
72 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
73 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
74 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
75 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
76 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
77 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
78 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
79 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
80 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
81 2786546517 Verrucomicrobia bacterium LW23 Isolate Rhizoplane

Type Distribution

Type Percentage (%)
Metagenomes 99.1
Metatranscriptomes 0
Isolates 0.9

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.7
Nodule 0
Rhizoplane 0.9
Rhizosphere 92.79
Stem 0
Stem Tuber 0
Unclassified 12.61

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070717_10103894 3300006028 Unclassified 2416
2 rootH2_10025964 3300003320 Bacteria 3574
3 rootH2_10119208 3300003320 Bacteria 2671
4 rootL2_10110663 3300003322 Unclassified 2360
5 Ga0070658_10069221 3300005327 Bacteria 2887
6 Ga0070658_10116391 3300005327 Bacteria 2218
7 Ga0070670_100143520 3300005331 Unclassified 2065
8 Ga0070660_100255805 3300005339 Unclassified 1429
9 Ga0070689_100300841 3300005340 Bacteria 1335
10 Ga0070667_100427346 3300005367 Bacteria 1208
11 Ga0070713_100063723 3300005436 Bacteria 3092
12 Ga0070708_100245413 3300005445 Unclassified 1682
13 Ga0068853_100000007 3300005539 Bacteria 283307
14 Ga0070686_100148396 3300005544 Bacteria 1640
15 Ga0070665_100000037 3300005548 Bacteria 312727
16 Ga0068857_100001484 3300005577 Bacteria 18676
17 Ga0068856_100152738 3300005614 Unclassified 2318
18 Ga0068863_100001859 3300005841 Bacteria 20984
19 Ga0068863_100070754 3300005841 Bacteria 3300
20 Ga0068863_100225984 3300005841 Unclassified 1804
21 Ga0068858_100032793 3300005842 Bacteria 4824
22 Ga0068860_100000337 3300005843 Bacteria 63636
23 Ga0068871_100116104 3300006358 Bacteria 2256
24 Ga0075434_100242993 3300006871 Unclassified 1820
25 Ga0105240_10000018 3300009093 Bacteria 434461
26 Ga0105240_10007092 3300009093 Bacteria 16337
27 Ga0105240_10066125 3300009093 Bacteria 4486
28 Ga0111539_10214108 3300009094 Bacteria 2244
29 Ga0105237_10005670 3300009545 Bacteria 14050
30 Ga0105238_10097146 3300009551 Bacteria 2932
31 Ga0105239_10035084 3300010375 Bacteria 5509
32 Ga0157374_10188253 3300013296 Bacteria 2018
33 Ga0157374_10272003 3300013296 Bacteria 1671
34 Ga0157375_10000025 3300013308 Bacteria 224384
35 Ga0163163_10000608 3300014325 Bacteria 31153
36 Ga0163163_10025778 3300014325 Bacteria 5608
37 Ga0163163_10337708 3300014325 Bacteria 1561
38 Ga0207680_10014298 3300025903 Bacteria 4102
39 Ga0207695_10000141 3300025913 Bacteria 215831
40 Ga0207695_10004062 3300025913 Bacteria 20122
41 Ga0207703_10021521 3300026035 Bacteria 5049
42 Ga0207703_10023562 3300026035 Bacteria 4838
43 Ga0207639_10000001 3300026041 Bacteria 1431562
44 Ga0207641_10000597 3300026088 Bacteria 39687
45 Ga0207641_10069711 3300026088 Bacteria 3020
46 Ga0207674_10122798 3300026116 Bacteria 2563
47 Ga0268266_10000046 3300028379 Bacteria 312745
48 Ga0268264_10000550 3300028381 Bacteria 47120
49 Ga0265337_1012406 3300028556 Bacteria 2897
50 Ga0265338_10023484 3300028800 Bacteria 6338
51 Ga0307511_10000064 3300030521 Bacteria 89445
52 Ga0265320_10009243 3300031240 Bacteria 5960
53 Ga0373926_0005857 3300035083 Bacteria 4063
54 Ga0373928_0000137 3300035084 Bacteria 13830
55 Ga0373929_0001464 3300035085 Unclassified 4493
56 Ga0373944_0000276 3300035089 Bacteria 11309
57 Ga0373949_0004075 3300035090 Bacteria 3382
58 Ga0373932_0000001 3300035112 Bacteria 1459067
59 Ga0373956_0016014 3300035119 Bacteria 3144
60 Ga0316574_0072817 3300035398 Bacteria 2172
61 Ga0373931_0000004 3300035691 Bacteria 535140
62 Ga0373935_0152324 3300035692 Bacteria 1570
63 Ga0373937_0066869 3300036401 Bacteria 3311
64 Ga0316582_0197503 3300036647 Bacteria 1372
65 Ga0373925_0001561 3300037068 Bacteria 19472
66 Ga0373925_0028307 3300037068 Bacteria 4105
67 Ga0395905_0194668 3300037471 Bacteria 1901
68 Ga0451577_0000911 3300042876 Bacteria 43516
69 Ga0451577_0003992 3300042876 Bacteria 15889
70 Ga0451577_0018911 3300042876 Bacteria 6343
71 Ga0451577_0057806 3300042876 Bacteria 3457
72 Ga0453684_0001655 3300044712 Bacteria 60458
73 Ga0453684_0002874 3300044712 Bacteria 40400
74 Ga0453684_0013039 3300044712 Bacteria 13574
75 Ga0453684_0512770 3300044712 Bacteria 1326
76 Ga0451576_0019861 3300045051 Bacteria 7328
77 Ga0451576_0024950 3300045051 Bacteria 6450
78 Ga0451576_0037117 3300045051 Bacteria 5163
79 Ga0451576_0111353 3300045051 Bacteria 2849
80 Ga0451576_0283029 3300045051 Bacteria 1734
81 Ga0451576_0515369 3300045051 Bacteria 1256
82 Ga0495592_0074120 3300046454 Bacteria 2473
83 Ga0495629_0126120 3300046459 Bacteria 1783
84 Ga0495618_0029142 3300046514 Unclassified 3443
85 Ga0495630_0000040 3300046517 Bacteria 106232
86 Ga0495630_0071129 3300046517 Bacteria 2618
87 Ga0495630_0185773 3300046517 Unclassified 1586
88 Ga0495643_0000842 3300046522 Bacteria 33310
89 Ga0495666_0015050 3300046526 Bacteria 3850
90 Ga0495586_0000018 3300046535 Bacteria 112658
91 Ga0495586_0007213 3300046535 Bacteria 5929
92 Ga0495586_0013495 3300046535 Bacteria 4334
93 Ga0495645_0018428 3300046543 Bacteria 5013
94 Ga0495645_0180039 3300046543 Bacteria 1449
95 Ga0495634_0007105 3300046642 Bacteria 8443
96 Ga0495599_0077870 3300046678 Bacteria 2070
97 Ga0495658_0067844 3300046683 Bacteria 2064
98 Ga0495613_0263891 3300046689 Unclassified 1199
99 Ga0495624_0122692 3300046690 Unclassified 1595
100 Ga0495674_0000489 3300047319 Bacteria 36129
101 Ga0495676_0002071 3300047321 Bacteria 17657
102 Ga0495680_0026377 3300047322 Bacteria 4790
103 Ga0501034_0059920 3300049571 Bacteria 3824
104 Ga0501083_0000791 3300049744 Bacteria 20771
105 nmdc:mga08y16_339514_c1 3300050511 Bacteria 1544
106 nmdc:mga0n895_242716_c1 3300050512 Bacteria 1828
107 nmdc:mga0n895_351841_c1 3300050512 Unclassified 1492
108 Ga0500643_058729 3300053087 Bacteria 1084
109 Ga0500555_000003 3300053103 Bacteria 392994
110 Ga0500645_005202 3300053730 Bacteria 4842
111 2787437466 2786546517 Bacteria 6614109
112 Ga0070717_10103894
113 rootH2_10025964
114 rootH2_10119208
115 rootL2_10110663
116 Ga0070658_10069221
117 Ga0070658_10116391
118 Ga0070670_100143520
119 Ga0070660_100255805
120 Ga0070689_100300841
121 Ga0070667_100427346
122 Ga0070713_100063723
123 Ga0070708_100245413
124 Ga0068853_100000007
125 Ga0070686_100148396
126 Ga0070665_100000037
127 Ga0068857_100001484
128 Ga0068856_100152738
129 Ga0068863_100001859
130 Ga0068863_100070754
131 Ga0068863_100225984
132 Ga0068858_100032793
133 Ga0068860_100000337
134 Ga0068871_100116104
135 Ga0075434_100242993
136 Ga0105240_10000018
137 Ga0105240_10007092
138 Ga0105240_10066125
139 Ga0111539_10214108
140 Ga0105237_10005670
141 Ga0105238_10097146
142 Ga0105239_10035084
143 Ga0157374_10188253
144 Ga0157374_10272003
145 Ga0157375_10000025
146 Ga0163163_10000608
147 Ga0163163_10025778
148 Ga0163163_10337708
149 Ga0207680_10014298
150 Ga0207695_10000141
151 Ga0207695_10004062
152 Ga0207703_10021521
153 Ga0207703_10023562
154 Ga0207639_10000001
155 Ga0207641_10000597
156 Ga0207641_10069711
157 Ga0207674_10122798
158 Ga0268266_10000046
159 Ga0268264_10000550
160 Ga0265337_1012406
161 Ga0265338_10023484
162 Ga0307511_10000064
163 Ga0265320_10009243
164 Ga0373926_0005857
165 Ga0373928_0000137
166 Ga0373929_0001464
167 Ga0373944_0000276
168 Ga0373949_0004075
169 Ga0373932_0000001
170 Ga0373956_0016014
171 Ga0316574_0072817
172 Ga0373931_0000004
173 Ga0373935_0152324
174 Ga0373937_0066869
175 Ga0316582_0197503
176 Ga0373925_0001561
177 Ga0373925_0028307
178 Ga0395905_0194668
179 Ga0451577_0000911
180 Ga0451577_0003992
181 Ga0451577_0018911
182 Ga0451577_0057806
183 Ga0453684_0001655
184 Ga0453684_0002874
185 Ga0453684_0013039
186 Ga0453684_0512770
187 Ga0451576_0019861
188 Ga0451576_0024950
189 Ga0451576_0037117
190 Ga0451576_0111353
191 Ga0451576_0283029
192 Ga0451576_0515369
193 Ga0495592_0074120
194 Ga0495629_0126120
195 Ga0495618_0029142
196 Ga0495630_0000040
197 Ga0495630_0071129
198 Ga0495630_0185773
199 Ga0495643_0000842
200 Ga0495666_0015050
201 Ga0495586_0000018
202 Ga0495586_0007213
203 Ga0495586_0013495
204 Ga0495645_0018428
205 Ga0495645_0180039
206 Ga0495634_0007105
207 Ga0495599_0077870
208 Ga0495658_0067844
209 Ga0495613_0263891
210 Ga0495624_0122692
211 Ga0495674_0000489
212 Ga0495676_0002071
213 Ga0495680_0026377
214 Ga0501034_0059920
215 Ga0501083_0000791
216 nmdc:mga08y16_339514_c1
217 nmdc:mga0n895_242716_c1
218 nmdc:mga0n895_351841_c1
219 Ga0500643_058729
220 Ga0500555_000003
221 Ga0500645_005202
222 2787437466

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Structural Annotation

Top 5 Hits

ID Description Score Start End
7vva-assembly1.cif.gz_E pseudouridine bound structure of pseudouridine kinase (puki) from escherichia coli strain b 0.8059 25 371
7vva-assembly1.cif.gz_C pseudouridine bound structure of pseudouridine kinase (puki) from escherichia coli strain b 0.8056 25 371
7vva-assembly1.cif.gz_E pseudouridine bound structure of pseudouridine kinase (puki) from escherichia coli strain b 0.7961 25 371
7vtg-assembly2.cif.gz_C pseudouridine bound structure of pseudouridine kinase (puki) s30a mutant from escherichia coli strain b 0.796 25 369
7vva-assembly1.cif.gz_C pseudouridine bound structure of pseudouridine kinase (puki) from escherichia coli strain b 0.7958 25 371
ID Description Score Start End Superfamily
af_P76419_11_318_3.40.1190.20 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.7972 23 366 3.40.1190.20
2qhpA00 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.7898 27 368 3.40.1190.20
2abqB00 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.7875 27 371 3.40.1190.20
af_P76419_11_318_3.40.1190.20 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.7806 23 366 3.40.1190.20
2qhpA00 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.7798 27 368 3.40.1190.20
ID Description Score Start End GO Terms
AF-A0A850BFL4-F1-model_v4 Carbohydrate kinase PfkB domain-containing protein 0.9872 230 370
AF-A0A833APT9-F1-model_v4 Carbohydrate kinase PfkB domain-containing protein 0.9861 248 370
AF-A0A2G6GRG3-F1-model_v4 Carbohydrate kinase PfkB domain-containing protein 0.9842 293 369
AF-A0A6N6PM81-F1-model_v4 Carbohydrate kinase PfkB domain-containing protein 0.9815 7 371
AF-A0A1H2DZ67-F1-model_v4 Sugar or nucleoside kinase, ribokinase family 0.9814 2 371 GO:0016301

Map