F063023

General Info

Members Datasets Scaffolds Average Seq Length
111 79 222 511

Family's Representative Sequence

Representative Sequence 3300005467|Ga0070706_100035727|Ga0070706_1000357274
Length 557
Sequence MEGPDSGREKRTTMATFVKAPCDEGVIRSGTRASPCAPQVGVWVLVATILGSSMAFIDGSVVNVALPVIQQDLGATATDVQWIVETYALFLSSLILVGGSLGDLYGRRRIFALGIAVFTLSSIWCGLSPTVLSLILARAVQGIGAALLVPGSLAIISASFSEEQRGRAFGTWSGFSALTTVVGPVLGGVLVQYASWRWVFFLNVPLAAVVLVVLFWRVPESRDPEASGRLDWWGTLLVTLGLGALVYGLLEAGSLGLGTPLVLLGFLLVEARSSAPMVPLTLFRSHTFSGANLLTLLLYGALGGITFFLPFNLIQVQGYAPTLAGAAFLPFILLMFLLSRWAGGLVHRYGAKLPLVIGPLITAVGFALFAVPGITSGPSSYWTTFFPAVVVMGLGMSITVAPLTTTVMGAVEQRHAGVASGINNAVSRTAGLLAVAVFGIIALAVFTSSLQSHLATLHLSPAVYQVIEGQSTRLAGITIPNTISAEVQTALKQAVDASFVSAFRLVALLGAALALLSAMCAWWLIEGKQPERAGSSASEPQAATVQADRQAPQTSAN

Samples

Sample ID Description Type Environment
1 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
5 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
6 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
7 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
8 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
9 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
10 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
11 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
12 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
13 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
14 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
15 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
16 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
17 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
18 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
19 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
20 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
21 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
22 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
23 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
24 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
25 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
26 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
27 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
28 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
29 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
30 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
31 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
32 3300022730 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU2 Metagenome Rhizosphere
33 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300028017 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4 Metagenome Rhizosphere
45 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
46 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
47 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
48 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
49 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
50 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
51 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
52 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
53 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
54 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
55 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
56 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
57 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
58 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
59 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
60 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
61 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
62 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
63 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
64 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
65 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
66 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
67 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
68 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
69 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
70 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
71 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
72 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
73 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
74 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
75 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
76 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
77 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
78 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
79 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.1
Metatranscriptomes 0.9
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.8
Nodule 0
Rhizoplane 0
Rhizosphere 94.59
Stem 0
Stem Tuber 0
Unclassified 8.11

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070706_100035727 3300005467 Bacteria 4588
2 rootH1_10093208 3300003323 Bacteria 2222
3 Ga0070670_100024811 3300005331 Bacteria 5158
4 Ga0070661_100053287 3300005344 Bacteria 2960
5 Ga0070661_100053978 3300005344 Bacteria 2943
6 Ga0070671_100001445 3300005355 Bacteria 17728
7 Ga0070674_100031119 3300005356 Bacteria 3533
8 Ga0070688_100037444 3300005365 Bacteria 2956
9 Ga0070694_100009991 3300005444 Bacteria 5834
10 Ga0070708_100037664 3300005445 Bacteria 4221
11 Ga0068867_100127903 3300005459 Unclassified 1971
12 Ga0070706_100002987 3300005467 Bacteria 16762
13 Ga0070707_100010178 3300005468 Bacteria 8756
14 Ga0070707_100015052 3300005468 Bacteria 7258
15 Ga0070707_100068269 3300005468 Bacteria 3421
16 Ga0070707_100180188 3300005468 Bacteria 2060
17 Ga0070698_100059664 3300005471 Bacteria 3852
18 Ga0070698_100117302 3300005471 Bacteria 2624
19 Ga0070699_100002311 3300005518 Bacteria 17164
20 Ga0070699_100075712 3300005518 Bacteria 2929
21 Ga0070697_100000067 3300005536 Bacteria 83699
22 Ga0070697_100111262 3300005536 Bacteria 2283
23 Ga0070695_100003688 3300005545 Bacteria 8923
24 Ga0070664_100005042 3300005564 Bacteria 10586
25 Ga0068863_100038376 3300005841 Bacteria 4557
26 Ga0068863_100059011 3300005841 Bacteria 3631
27 Ga0068863_100085863 3300005841 Bacteria 2982
28 Ga0070717_10008457 3300006028 Bacteria 7689
29 Ga0070717_10081471 3300006028 Bacteria 2717
30 Ga0097621_100060837 3300006237 Bacteria 3096
31 Ga0075431_100007989 3300006847 Bacteria 10553
32 Ga0075431_100017285 3300006847 Bacteria 7329
33 Ga0075431_100108171 3300006847 Bacteria 2869
34 Ga0075434_100002206 3300006871 Bacteria 16975
35 Ga0075436_100004781 3300006914 Bacteria 9303
36 Ga0075435_100000818 3300007076 Bacteria 19378
37 Ga0075435_100019682 3300007076 Bacteria 5160
38 Ga0111539_10019197 3300009094 Bacteria 8446
39 Ga0111539_10117385 3300009094 Bacteria 3119
40 Ga0111539_10147158 3300009094 Bacteria 2758
41 Ga0114129_10007610 3300009147 Bacteria 15415
42 Ga0114129_10042768 3300009147 Bacteria 6376
43 Ga0105248_10032060 3300009177 Bacteria 5872
44 Ga0099796_10010069 3300010159 Unclassified 2585
45 Ga0157374_10042746 3300013296 Bacteria 4182
46 Ga0157378_10009608 3300013297 Bacteria 8422
47 Ga0163163_10063811 3300014325 Bacteria 3654
48 Ga0213875_10042181 3300021388 Bacteria 2144
49 Ga0224570_100076 3300022730 Bacteria 5596
50 Ga0207684_10001368 3300025910 Bacteria 26629
51 Ga0207684_10006156 3300025910 Bacteria 10973
52 Ga0207693_10169294 3300025915 Bacteria 1720
53 Ga0207649_10056656 3300025920 Bacteria 2448
54 Ga0207646_10002806 3300025922 Bacteria 20270
55 Ga0207646_10019725 3300025922 Bacteria 6258
56 Ga0207646_10082946 3300025922 Bacteria 2867
57 Ga0207700_10171366 3300025928 Bacteria 1811
58 Ga0207644_10000735 3300025931 Bacteria 20778
59 Ga0207691_10050694 3300025940 Bacteria 3799
60 Ga0207651_10014770 3300025960 Bacteria 4520
61 Ga0207641_10006520 3300026088 Bacteria 9818
62 Ga0207641_10054560 3300026088 Bacteria 3392
63 Ga0207648_10076065 3300026089 Bacteria 2926
64 Ga0207676_10003705 3300026095 Bacteria 10805
65 Ga0265356_1000155 3300028017 Bacteria 12416
66 Ga0265338_10002207 3300028800 Bacteria 29742
67 Ga0265760_10000032 3300031090 Bacteria 49109
68 Ga0373924_0041474 3300035410 Bacteria 1886
69 Ga0373933_0067152 3300035724 Unclassified 2175
70 Ga0373937_0009953 3300036401 Bacteria 8291
71 Ga0373937_0098492 3300036401 Unclassified 2712
72 Ga0373937_0132203 3300036401 Bacteria 2331
73 Ga0395905_0001257 3300037471 Bacteria 31335
74 Ga0436364_0508392 3300037853 Bacteria 5260
75 Ga0436364_0941826 3300037853 Bacteria 5340
76 Ga0395901_0188421 3300038443 Unclassified 2164
77 Ga0466969_0014631 3300044656 Unclassified 4126
78 Ga0466963_0046081 3300044694 Bacteria 2874
79 Ga0466959_0012306 3300045049 Bacteria 6178
80 Ga0495592_0122295 3300046454 Bacteria 1829
81 Ga0495629_0081756 3300046459 Bacteria 2255
82 Ga0495650_0033441 3300046471 Bacteria 2288
83 Ga0495580_0068096 3300046472 Unclassified 2490
84 Ga0495580_0071502 3300046472 Bacteria 2424
85 Ga0495608_0095999 3300046511 Bacteria 1915
86 Ga0495608_0122969 3300046511 Bacteria 1663
87 Ga0495618_0014323 3300046514 Bacteria 4830
88 Ga0495667_0016402 3300046559 Bacteria 5006
89 Ga0495659_0018024 3300046664 Bacteria 2348
90 Ga0495657_0007164 3300046675 Bacteria 8652
91 Ga0495599_0023611 3300046678 Bacteria 3845
92 Ga0495669_0015725 3300046684 Unclassified 3240
93 Ga0495613_0028424 3300046689 Bacteria 4158
94 Ga0495613_0046888 3300046689 Unclassified 3194
95 Ga0495674_0101187 3300047319 Bacteria 2451
96 Ga0501037_0002645 3300049573 Bacteria 12913
97 Ga0501077_0022247 3300049593 Bacteria 4016
98 Ga0501044_0178435 3300049823 Bacteria 2092
99 nmdc:mga0k408_4484_c1 3300050493 Bacteria 7409
100 nmdc:mga05p37_13425_c1 3300050507 Bacteria 9817
101 nmdc:mga05p37_55213_c1 3300050507 Bacteria 4887
102 nmdc:mga06r32_16943_c1 3300050510 Bacteria 6647
103 nmdc:mga06r32_80479_c1 3300050510 Bacteria 3170
104 nmdc:mga08y16_249865_c1 3300050511 Bacteria 1833
105 nmdc:mga0n895_963_c1 3300050512 Bacteria 20861
106 nmdc:mga0rr50_11306_c1 3300050513 Bacteria 5707
107 nmdc:mga0rr50_139513_c1 3300050513 Bacteria 1949
108 nmdc:mga0rr50_203_c1 3300050513 Bacteria 32093
109 nmdc:mga08x19_14_c1 3300050514 Bacteria 365567
110 nmdc:mga08x19_329_c1 3300050514 Bacteria 34297
111 Ga0500616_0002544 3300053153 Bacteria 15038
112 Ga0070706_100035727
113 rootH1_10093208
114 Ga0070670_100024811
115 Ga0070661_100053287
116 Ga0070661_100053978
117 Ga0070671_100001445
118 Ga0070674_100031119
119 Ga0070688_100037444
120 Ga0070694_100009991
121 Ga0070708_100037664
122 Ga0068867_100127903
123 Ga0070706_100002987
124 Ga0070707_100010178
125 Ga0070707_100015052
126 Ga0070707_100068269
127 Ga0070707_100180188
128 Ga0070698_100059664
129 Ga0070698_100117302
130 Ga0070699_100002311
131 Ga0070699_100075712
132 Ga0070697_100000067
133 Ga0070697_100111262
134 Ga0070695_100003688
135 Ga0070664_100005042
136 Ga0068863_100038376
137 Ga0068863_100059011
138 Ga0068863_100085863
139 Ga0070717_10008457
140 Ga0070717_10081471
141 Ga0097621_100060837
142 Ga0075431_100007989
143 Ga0075431_100017285
144 Ga0075431_100108171
145 Ga0075434_100002206
146 Ga0075436_100004781
147 Ga0075435_100000818
148 Ga0075435_100019682
149 Ga0111539_10019197
150 Ga0111539_10117385
151 Ga0111539_10147158
152 Ga0114129_10007610
153 Ga0114129_10042768
154 Ga0105248_10032060
155 Ga0099796_10010069
156 Ga0157374_10042746
157 Ga0157378_10009608
158 Ga0163163_10063811
159 Ga0213875_10042181
160 Ga0224570_100076
161 Ga0207684_10001368
162 Ga0207684_10006156
163 Ga0207693_10169294
164 Ga0207649_10056656
165 Ga0207646_10002806
166 Ga0207646_10019725
167 Ga0207646_10082946
168 Ga0207700_10171366
169 Ga0207644_10000735
170 Ga0207691_10050694
171 Ga0207651_10014770
172 Ga0207641_10006520
173 Ga0207641_10054560
174 Ga0207648_10076065
175 Ga0207676_10003705
176 Ga0265356_1000155
177 Ga0265338_10002207
178 Ga0265760_10000032
179 Ga0373924_0041474
180 Ga0373933_0067152
181 Ga0373937_0009953
182 Ga0373937_0098492
183 Ga0373937_0132203
184 Ga0395905_0001257
185 Ga0436364_0508392
186 Ga0436364_0941826
187 Ga0395901_0188421
188 Ga0466969_0014631
189 Ga0466963_0046081
190 Ga0466959_0012306
191 Ga0495592_0122295
192 Ga0495629_0081756
193 Ga0495650_0033441
194 Ga0495580_0068096
195 Ga0495580_0071502
196 Ga0495608_0095999
197 Ga0495608_0122969
198 Ga0495618_0014323
199 Ga0495667_0016402
200 Ga0495659_0018024
201 Ga0495657_0007164
202 Ga0495599_0023611
203 Ga0495669_0015725
204 Ga0495613_0028424
205 Ga0495613_0046888
206 Ga0495674_0101187
207 Ga0501037_0002645
208 Ga0501077_0022247
209 Ga0501044_0178435
210 nmdc:mga0k408_4484_c1
211 nmdc:mga05p37_13425_c1
212 nmdc:mga05p37_55213_c1
213 nmdc:mga06r32_16943_c1
214 nmdc:mga06r32_80479_c1
215 nmdc:mga08y16_249865_c1
216 nmdc:mga0n895_963_c1
217 nmdc:mga0rr50_11306_c1
218 nmdc:mga0rr50_139513_c1
219 nmdc:mga0rr50_203_c1
220 nmdc:mga08x19_14_c1
221 nmdc:mga08x19_329_c1
222 Ga0500616_0002544

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07690

MFS_1

Major Facilitator Superfamily

48

436

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
7y58-assembly1.cif.gz_A cryoem structure of qaca (d411n), an antibacterial efflux transporter from staphylococcus aureus 0.8916 19 509
7y58-assembly1.cif.gz_A cryoem structure of qaca (d411n), an antibacterial efflux transporter from staphylococcus aureus 0.8585 19 509
7d5p-assembly1.cif.gz_A structure of norc transporter in an outward-open conformation in complex with a single-chain indian camelid antibody 0.8182 31 502
8pnl-assembly1.cif.gz_A outward-open conformation of a major facilitator superfamily (mfs) transporter mhas2168, a homologue of rv1410 from m. tuberculosis, in complex with an alpaca nanobody 0.8111 28 507
7d5p-assembly1.cif.gz_A structure of norc transporter in an outward-open conformation in complex with a single-chain indian camelid antibody 0.8108 31 502
ID Description Score Start End Superfamily
af_P9WG87_21_208_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9881 34 209 1.20.1250.20
af_P36554_12_217_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9655 34 238 1.20.1250.20
af_Q04301_34_211_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9594 30 206 1.20.1250.20
af_P9WG91_8_214_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9585 33 235 1.20.1250.20
af_P36554_12_217_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9519 34 238 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A6N3RVD1-F1-model_v4 deleted 0.952 27 216
AF-A0A132T9A8-F1-model_v4 Major facilitator superfamily (MFS) profile domain-containing protein 0.9423 31 203 GO:0016020
GO:0022857
AF-F8L4R2-F1-model_v4 Major facilitator superfamily (MFS) profile domain-containing protein 0.9413 25 204 GO:0016020
GO:0022857
AF-A0A7S4LEE3-F1-model_v4 Major facilitator superfamily (MFS) profile domain-containing protein 0.9253 64 214 GO:0005886
GO:0022857
AF-E6JCD2-F1-model_v4 deleted 0.921 33 213

Map