F056589
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 109 | 92 | 218 | 336 |
Family's Representative Sequence
| Representative Sequence | iso_pu_bacteria|2808606448|2809235228 |
| Length | 360 |
| Sequence | PVPNSPKVNTGSMRTPRLRVLALAAALLLGLTACGGQDDDTTSDGSAAAAGAPGQFPVTIEHALGTTVVPDKPKRVATVNWANDEVPLALGVVPVGMAKANFGDDDGDGVLPWTEKRLKELDAKTPVLFDETDGIDFEAVADTRPDVILAAYSGLTAQDYETLSEIAPVVAYPEAAWATPWRDIIRLNSKAIGLADEGDELIGDLEGRITETAAKYPQIKGKSAMFMTHVSSKDVSEVGFYTTHDTRTQFFTDLGMKIPASVSGPSKDTKKFVLTKSAERIDDFNDVDIVTGYGDDKGELLAALENDPLTSKLTAVKQGSIYLLPGSSPLATAANPTPLSIPYVLDDYVKALAAAADKAA |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300002738 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA | Metagenome | Unclassified |
| 2 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 3 | 3300006042 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 | Metagenome | Endosphere |
| 4 | 3300006048 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Metagenome | Endosphere |
| 5 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 6 | 3300006177 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 | Metagenome | Endosphere |
| 7 | 3300006178 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 | Metagenome | Endosphere |
| 8 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 9 | 3300025246 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) | Metagenome | Unclassified |
| 10 | 3300025273 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 11 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 12 | 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Metagenome | Rhizosphere |
| 13 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 14 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 15 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 16 | 3300041512 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG | Metagenome | Unclassified |
| 17 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 18 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 19 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 20 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 21 | 3300046471 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere | Metagenome | Rhizosphere |
| 22 | 3300046530 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere | Metagenome | Rhizosphere |
| 23 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 24 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 25 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 26 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 27 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 28 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 29 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 30 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 31 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 32 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 33 | 3300050489 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation | Metagenome | Endosphere |
| 34 | 3300050490 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation | Metagenome | Endosphere |
| 35 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 36 | 3300050492 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation | Metagenome | Endosphere |
| 37 | 3300050494 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation | Metagenome | Endosphere |
| 38 | 3300050495 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation | Metagenome | Endosphere |
| 39 | 3300050496 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation | Metagenome | Endosphere |
| 40 | 3300053088 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere | Metagenome | Endosphere |
| 41 | 3300053125 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere | Metagenome | Endosphere |
| 42 | 3300053140 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere | Metagenome | Endosphere |
| 43 | 3300053142 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere | Metagenome | Endosphere |
| 44 | 2808606448 | Streptomyces sp. 193411 | Isolate | Unclassified |
| 45 | 2515154129 | Salinispora pacifica CNS103 | Isolate | Rhizosphere |
| 46 | 2515154137 | Salinispora arenicola CNX482 | Isolate | Rhizosphere |
| 47 | 2554235227 | Arthrobacter sp. PAO19 | Isolate | Rhizosphere |
| 48 | 2565956761 | Rhodococcus qingshengii BKS 20-40 | Isolate | Rhizosphere |
| 49 | 2599185236 | Rhizobium sp. NFR07 | Isolate | Rhizoplane |
| 50 | 2643221542 | Microbacterium sp. Root1433D1 | Isolate | Unclassified |
| 51 | 2643221548 | Streptomyces sp. Root55 | Isolate | Unclassified |
| 52 | 2643221575 | Microbacterium sp. Root61 | Isolate | Unclassified |
| 53 | 2643221578 | Streptomyces sp. Root63 | Isolate | Unclassified |
| 54 | 2643221630 | Microbacterium sp. Root322 | Isolate | Unclassified |
| 55 | 2643221673 | Streptomyces sp. Root1295 | Isolate | Unclassified |
| 56 | 2654587600 | Glutamicibacter halophytocola KLBMP5180 | Isolate | Unclassified |
| 57 | 2751185725 | Microbispora sp. NRRL B-24597 | Isolate | Unclassified |
| 58 | 2751185792 | Kitasatospora arboriphila NRRL B-24581 | Isolate | Unclassified |
| 59 | 2773857762 | Nocardioides sp. SAI-095 | Isolate | Unclassified |
| 60 | 2802429296 | Streptomyces sampsonii KJ40 | Isolate | Rhizosphere |
| 61 | 2852643534 | Leifsonia sp. AK011 | Isolate | Rhizosphere |
| 62 | 2852646457 | Microbacterium sp. AK031 | Isolate | Rhizosphere |
| 63 | 2852677369 | Pseudoclavibacter sp. JAI123 | Isolate | Rhizosphere |
| 64 | 2857720070 | Microbacterium sp. R-72113 | Isolate | Unclassified |
| 65 | 2857723135 | Microbacterium sp. R-72356 | Isolate | Unclassified |
| 66 | 2857729791 | Plantibacter sp. R-72288 | Isolate | Unclassified |
| 67 | 2857733635 | Salinibacterium sp. R-73062 | Isolate | Unclassified |
| 68 | 2862290372 | Streptomyces triticagri NEAU-YY421 | Isolate | Rhizosphere |
| 69 | 2862705112 | Streptomyces triticirhizae NEAU-YY642 | Isolate | Rhizosphere |
| 70 | 2867369537 | Streptomyces sp. Z26 | Isolate | Unclassified |
| 71 | 2875391855 | Streptomyces cavourensis 1AS2a | Isolate | Rhizosphere |
| 72 | 2897561785 | Pseudoclavibacter endophyticus EGI 60007 | Isolate | Unclassified |
| 73 | 2904535858 | Rhodococcus erythropolis 2017 | Isolate | Unclassified |
| 74 | 2922554459 | Rhodococcus sp. 66b | Isolate | Unclassified |
| 75 | 2928121344 | Plantibacter flavus 1756 | Isolate | Rhizosphere |
| 76 | 2939657138 | Conyzicola nivalis 2857 | Isolate | Rhizosphere |
| 77 | 2945968032 | Microbacterium murale W2I7 | Isolate | Rhizosphere |
| 78 | 2946041624 | Microbacterium natoriense W4I9-1 | Isolate | Rhizosphere |
| 79 | 2946045630 | Streptomyces sp. W4I9-2 | Isolate | Rhizosphere |
| 80 | 2956939328 | Lolliginicoccus suaedae LNNU 331112 | Isolate | Rhizosphere |
| 81 | 2984576629 | Nocardioides zeae SORGH_AS913 | Isolate | Aerial Root |
| 82 | 2990044586 | Streptomyces sedi JCM 16909 | Isolate | Unclassified |
| 83 | 2990256926 | Nocardioides zeae SORGH_AS885 | Isolate | Aerial Root |
| 84 | 8004182704 | Microbacterium paraoxydans ku-mp | Isolate | Unclassified |
| 85 | 8004212874 | Microbacterium sp. NC79 | Isolate | Rhizosphere |
| 86 | 8008485437 | Streptomyces mimosae 3MP-10 | Isolate | Unclassified |
| 87 | 8025413630 | Streptomyces sp. CAI-17 | Isolate | Rhizosphere |
| 88 | 8025524527 | Streptomyces sp. 3MP-14 | Isolate | Unclassified |
| 89 | 8025530807 | Streptomyces sp. 4R-3d | Isolate | Unclassified |
| 90 | 8047710418 | Umezawaea endophytica DSM 103496 | Isolate | Unclassified |
| 91 | 8055037949 | Leucobacter rhizosphaerae H25R-14 | Isolate | Rhizosphere |
| 92 | 8056207758 | Saccharopolyspora indica KCTC 29208 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 55.05 |
| Metatranscriptomes | 0 |
| Isolates | 44.95 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 1.83 |
| Bulb | 0 |
| Endosphere | 28.44 |
| Nodule | 0 |
| Rhizoplane | 2.75 |
| Rhizosphere | 36.7 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI25154J39366_1002544 | 3300002738 | Bacteria | 4608 |
| 2 | Ga0075365_10002376 | 3300006038 | Bacteria | 9194 |
| 3 | Ga0075365_10125728 | 3300006038 | Bacteria | 1772 |
| 4 | Ga0075368_10010765 | 3300006042 | Bacteria | 3314 |
| 5 | Ga0075363_100000958 | 3300006048 | Bacteria | 10243 |
| 6 | Ga0075363_100092173 | 3300006048 | Bacteria | 1669 |
| 7 | Ga0075364_10007661 | 3300006051 | Bacteria | 6421 |
| 8 | Ga0075364_10013709 | 3300006051 | Bacteria | 4992 |
| 9 | Ga0075364_10041398 | 3300006051 | Bacteria | 2992 |
| 10 | Ga0075364_10083922 | 3300006051 | Bacteria | 2109 |
| 11 | Ga0075362_10005899 | 3300006177 | Bacteria | 4522 |
| 12 | Ga0075362_10026612 | 3300006177 | Bacteria | 2472 |
| 13 | Ga0075367_10003366 | 3300006178 | Bacteria | 7607 |
| 14 | Ga0075367_10037200 | 3300006178 | Bacteria | 2827 |
| 15 | Ga0157369_10066732 | 3300013105 | Bacteria | 3870 |
| 16 | Ga0209646_1000085 | 3300025246 | Bacteria | 197351 |
| 17 | Ga0209673_1002763 | 3300025273 | Bacteria | 11468 |
| 18 | Ga0207658_10316740 | 3300025986 | Bacteria | 1349 |
| 19 | Ga0307405_10086714 | 3300031731 | Bacteria | 2061 |
| 20 | Ga0307406_10001715 | 3300031901 | Bacteria | 12044 |
| 21 | Ga0307416_100648370 | 3300032002 | Bacteria | 1140 |
| 22 | Ga0307415_100269581 | 3300032126 | Bacteria | 1394 |
| 23 | Ga0451853_1407356 | 3300041512 | Bacteria | 1486 |
| 24 | Ga0451853_2447864 | 3300041512 | Bacteria | 3457 |
| 25 | Ga0466965_0042030 | 3300044683 | Bacteria | 2253 |
| 26 | Ga0466970_0036827 | 3300044765 | Bacteria | 2592 |
| 27 | Ga0466970_0037288 | 3300044765 | Bacteria | 2577 |
| 28 | Ga0466957_0109447 | 3300044842 | Bacteria | 1751 |
| 29 | Ga0466960_0016883 | 3300044901 | Bacteria | 3174 |
| 30 | Ga0466960_0053227 | 3300044901 | Bacteria | 1961 |
| 31 | Ga0495650_0071607 | 3300046471 | Bacteria | 1359 |
| 32 | Ga0495654_0000369 | 3300046530 | Bacteria | 39001 |
| 33 | Ga0495668_0000167 | 3300046616 | Bacteria | 97427 |
| 34 | Ga0496108_0110823 | 3300048911 | Bacteria | 2347 |
| 35 | Ga0496111_0001989 | 3300048914 | Bacteria | 12152 |
| 36 | Ga0496119_0018907 | 3300048922 | Bacteria | 5102 |
| 37 | Ga0496124_0237582 | 3300048927 | Bacteria | 1357 |
| 38 | Ga0496126_0026764 | 3300048929 | Bacteria | 5523 |
| 39 | Ga0496126_0027855 | 3300048929 | Bacteria | 5390 |
| 40 | Ga0501034_0001300 | 3300049571 | Bacteria | 33769 |
| 41 | Ga0501070_0177796 | 3300049586 | Bacteria | 1752 |
| 42 | Ga0501074_0072139 | 3300049590 | Bacteria | 2481 |
| 43 | Ga0501080_0135636 | 3300049742 | Bacteria | 2278 |
| 44 | nmdc:mga03683_12017_c1 | 3300050489 | Bacteria | 3150 |
| 45 | nmdc:mga03683_99531_c1 | 3300050489 | Bacteria | 1276 |
| 46 | nmdc:mga03n38_12960_c1 | 3300050490 | Bacteria | 3154 |
| 47 | nmdc:mga03n38_7173_c1 | 3300050490 | Bacteria | 3926 |
| 48 | nmdc:mga00v17_100366_c1 | 3300050491 | Bacteria | 1826 |
| 49 | nmdc:mga00v17_16834_c1 | 3300050491 | Bacteria | 4127 |
| 50 | nmdc:mga0yw44_46444_c1 | 3300050492 | Bacteria | 2608 |
| 51 | nmdc:mga06z11_15503_c1 | 3300050494 | Bacteria | 3403 |
| 52 | nmdc:mga04h51_3418_c1 | 3300050495 | Bacteria | 3860 |
| 53 | nmdc:mga07m45_103580_c1 | 3300050496 | Bacteria | 1636 |
| 54 | nmdc:mga07m45_4491_c1 | 3300050496 | Bacteria | 6830 |
| 55 | Ga0500644_0000054 | 3300053088 | Bacteria | 69110 |
| 56 | Ga0500618_000090 | 3300053125 | Bacteria | 74320 |
| 57 | Ga0500573_0004924 | 3300053140 | Bacteria | 7084 |
| 58 | Ga0500573_0005847 | 3300053140 | Bacteria | 6612 |
| 59 | Ga0500573_0023883 | 3300053140 | Bacteria | 3513 |
| 60 | Ga0500577_0018171 | 3300053142 | Bacteria | 2255 |
| 61 | 2809235228 | 2808606448 | Bacteria | 8656184 |
| 62 | 2515720978 | 2515154129 | Bacteria | 5584369 |
| 63 | 2515757249 | 2515154137 | Bacteria | 5711575 |
| 64 | 2555228879 | 2554235227 | Bacteria | 3637389 |
| 65 | 2566994552 | 2565956761 | Bacteria | 6601618 |
| 66 | 2599718229 | 2599185236 | Bacteria | 6875203 |
| 67 | 2643734319 | 2643221542 | Bacteria | 3563959 |
| 68 | 2643761591 | 2643221548 | Bacteria | 8053412 |
| 69 | 2643885194 | 2643221575 | Bacteria | 4022601 |
| 70 | 2643898890 | 2643221578 | Bacteria | 9213798 |
| 71 | 2644172436 | 2643221630 | Bacteria | 3601215 |
| 72 | 2644403550 | 2643221673 | Bacteria | 9196637 |
| 73 | 2655033344 | 2654587600 | Bacteria | 3911798 |
| 74 | 2753036658 | 2751185725 | Bacteria | 5740550 |
| 75 | 2753324528 | 2751185792 | Bacteria | 5739090 |
| 76 | 2774393717 | 2773857762 | Bacteria | 5971770 |
| 77 | 2804848913 | 2802429296 | Bacteria | 7227771 |
| 78 | 2852643897 | 2852643534 | Bacteria | 3013378 |
| 79 | 2852649469 | 2852646457 | Bacteria | 3408613 |
| 80 | 2852679649 | 2852677369 | Bacteria | 3768884 |
| 81 | 2857721715 | 2857720070 | Bacteria | 3189373 |
| 82 | 2857725617 | 2857723135 | Bacteria | 4217853 |
| 83 | 2857732438 | 2857729791 | Bacteria | 4040535 |
| 84 | 2857736319 | 2857733635 | Bacteria | 3532004 |
| 85 | 2862295767 | 2862290372 | Bacteria | 7471434 |
| 86 | 2862708936 | 2862705112 | Bacteria | 6563286 |
| 87 | 2867374745 | 2867369537 | Bacteria | 6501581 |
| 88 | 2875392210 | 2875391855 | Bacteria | 7600475 |
| 89 | 2897562661 | 2897561785 | Bacteria | 3256946 |
| 90 | 2904536080 | 2904535858 | Bacteria | 6308016 |
| 91 | 2922555896 | 2922554459 | Bacteria | 6683962 |
| 92 | 2928122777 | 2928121344 | Bacteria | 3972376 |
| 93 | 2939657679 | 2939657138 | Bacteria | 3740283 |
| 94 | 2945970111 | 2945968032 | Bacteria | 4111363 |
| 95 | 2946042484 | 2946041624 | Bacteria | 4191385 |
| 96 | 2946052680 | 2946045630 | Bacteria | 8527308 |
| 97 | 2956940019 | 2956939328 | Bacteria | 3474458 |
| 98 | 2984579025 | 2984576629 | Bacteria | 4248407 |
| 99 | 2990048878 | 2990044586 | Bacteria | 6603797 |
| 100 | 2990260344 | 2990256926 | Bacteria | 4252839 |
| 101 | 8004183058 | 8004182704 | Bacteria | 3391155 |
| 102 | 8004215276 | 8004212874 | Bacteria | 2861420 |
| 103 | 8008488540 | 8008485437 | Bacteria | 7198341 |
| 104 | 8025417526 | 8025413630 | Bacteria | 7014048 |
| 105 | 8025525063 | 8025524527 | Bacteria | 7197316 |
| 106 | 8025537008 | 8025530807 | Bacteria | 8495698 |
| 107 | 8047711996 | 8047710418 | Bacteria | 11023148 |
| 108 | 8055038403 | 8055037949 | Bacteria | 3337834 |
| 109 | 8056209914 | 8056207758 | Bacteria | 8639239 |
| 110 | JGI25154J39366_1002544 | |||
| 111 | Ga0075365_10002376 | |||
| 112 | Ga0075365_10125728 | |||
| 113 | Ga0075368_10010765 | |||
| 114 | Ga0075363_100000958 | |||
| 115 | Ga0075363_100092173 | |||
| 116 | Ga0075364_10007661 | |||
| 117 | Ga0075364_10013709 | |||
| 118 | Ga0075364_10041398 | |||
| 119 | Ga0075364_10083922 | |||
| 120 | Ga0075362_10005899 | |||
| 121 | Ga0075362_10026612 | |||
| 122 | Ga0075367_10003366 | |||
| 123 | Ga0075367_10037200 | |||
| 124 | Ga0157369_10066732 | |||
| 125 | Ga0209646_1000085 | |||
| 126 | Ga0209673_1002763 | |||
| 127 | Ga0207658_10316740 | |||
| 128 | Ga0307405_10086714 | |||
| 129 | Ga0307406_10001715 | |||
| 130 | Ga0307416_100648370 | |||
| 131 | Ga0307415_100269581 | |||
| 132 | Ga0451853_1407356 | |||
| 133 | Ga0451853_2447864 | |||
| 134 | Ga0466965_0042030 | |||
| 135 | Ga0466970_0036827 | |||
| 136 | Ga0466970_0037288 | |||
| 137 | Ga0466957_0109447 | |||
| 138 | Ga0466960_0016883 | |||
| 139 | Ga0466960_0053227 | |||
| 140 | Ga0495650_0071607 | |||
| 141 | Ga0495654_0000369 | |||
| 142 | Ga0495668_0000167 | |||
| 143 | Ga0496108_0110823 | |||
| 144 | Ga0496111_0001989 | |||
| 145 | Ga0496119_0018907 | |||
| 146 | Ga0496124_0237582 | |||
| 147 | Ga0496126_0026764 | |||
| 148 | Ga0496126_0027855 | |||
| 149 | Ga0501034_0001300 | |||
| 150 | Ga0501070_0177796 | |||
| 151 | Ga0501074_0072139 | |||
| 152 | Ga0501080_0135636 | |||
| 153 | nmdc:mga03683_12017_c1 | |||
| 154 | nmdc:mga03683_99531_c1 | |||
| 155 | nmdc:mga03n38_12960_c1 | |||
| 156 | nmdc:mga03n38_7173_c1 | |||
| 157 | nmdc:mga00v17_100366_c1 | |||
| 158 | nmdc:mga00v17_16834_c1 | |||
| 159 | nmdc:mga0yw44_46444_c1 | |||
| 160 | nmdc:mga06z11_15503_c1 | |||
| 161 | nmdc:mga04h51_3418_c1 | |||
| 162 | nmdc:mga07m45_103580_c1 | |||
| 163 | nmdc:mga07m45_4491_c1 | |||
| 164 | Ga0500644_0000054 | |||
| 165 | Ga0500618_000090 | |||
| 166 | Ga0500573_0004924 | |||
| 167 | Ga0500573_0005847 | |||
| 168 | Ga0500573_0023883 | |||
| 169 | Ga0500577_0018171 | |||
| 170 | 2809235228 | |||
| 171 | 2515720978 | |||
| 172 | 2515757249 | |||
| 173 | 2555228879 | |||
| 174 | 2566994552 | |||
| 175 | 2599718229 | |||
| 176 | 2643734319 | |||
| 177 | 2643761591 | |||
| 178 | 2643885194 | |||
| 179 | 2643898890 | |||
| 180 | 2644172436 | |||
| 181 | 2644403550 | |||
| 182 | 2655033344 | |||
| 183 | 2753036658 | |||
| 184 | 2753324528 | |||
| 185 | 2774393717 | |||
| 186 | 2804848913 | |||
| 187 | 2852643897 | |||
| 188 | 2852649469 | |||
| 189 | 2852679649 | |||
| 190 | 2857721715 | |||
| 191 | 2857725617 | |||
| 192 | 2857732438 | |||
| 193 | 2857736319 | |||
| 194 | 2862295767 | |||
| 195 | 2862708936 | |||
| 196 | 2867374745 | |||
| 197 | 2875392210 | |||
| 198 | 2897562661 | |||
| 199 | 2904536080 | |||
| 200 | 2922555896 | |||
| 201 | 2928122777 | |||
| 202 | 2939657679 | |||
| 203 | 2945970111 | |||
| 204 | 2946042484 | |||
| 205 | 2946052680 | |||
| 206 | 2956940019 | |||
| 207 | 2984579025 | |||
| 208 | 2990048878 | |||
| 209 | 2990260344 | |||
| 210 | 8004183058 | |||
| 211 | 8004215276 | |||
| 212 | 8008488540 | |||
| 213 | 8025417526 | |||
| 214 | 8025525063 | |||
| 215 | 8025537008 | |||
| 216 | 8047711996 | |||
| 217 | 8055038403 | |||
| 218 | 8056209914 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 4hmq-assembly1.cif.gz_A | crystal structure of streptococcus pneumoniae tigr4 piaa in complex with ferrichrome | 0.9549 | 31 | 326 |
| 4hmp-assembly2.cif.gz_B | crystal structure of iron uptake abc transporter substrate-binding protein piaa from streptococcus pneumoniae tigr4 | 0.9502 | 31 | 326 |
| 4hmp-assembly1.cif.gz_A | crystal structure of iron uptake abc transporter substrate-binding protein piaa from streptococcus pneumoniae tigr4 | 0.9478 | 31 | 326 |
| 4hmp-assembly2.cif.gz_B | crystal structure of iron uptake abc transporter substrate-binding protein piaa from streptococcus pneumoniae tigr4 | 0.9407 | 31 | 326 |
| 4hmp-assembly1.cif.gz_A | crystal structure of iron uptake abc transporter substrate-binding protein piaa from streptococcus pneumoniae tigr4 | 0.9383 | 31 | 326 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 4hmpB01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nitrogenase molybdenum iron protein domain | 0.9745 | 31 | 166 | 3.40.50.1980 |
| 4hmpB01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nitrogenase molybdenum iron protein domain | 0.967 | 31 | 166 | 3.40.50.1980 |
| 4hmpB02 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nitrogenase molybdenum iron protein domain | 0.9134 | 168 | 326 | 3.40.50.1980 |
| 4hmpB02 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nitrogenase molybdenum iron protein domain | 0.8971 | 168 | 326 | 3.40.50.1980 |
| 4mdyA01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nitrogenase molybdenum iron protein domain | 0.8777 | 26 | 165 | 3.40.50.1980 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A6G3XUK5-F1-model_v4 | ABC transporter substrate-binding protein | 0.994 | 45 | 143 |
GO:0030288
GO:1901678 |
| AF-A0A6G3XUK5-F1-model_v4 | ABC transporter substrate-binding protein | 0.984 | 45 | 143 |
GO:0030288
GO:1901678 |
| AF-A0A5S4GRV5-F1-model_v4 | Iron-siderophore ABC transporter substrate-binding protein | 0.9755 | 31 | 326 |
GO:0030288
GO:1901678 |
| AF-A0A6G3CZN8-F1-model_v4 | ABC transporter substrate-binding protein | 0.9721 | 67 | 326 |
GO:0030288
GO:1901678 |
| AF-A0A4Q3HPJ1-F1-model_v4 | deleted | 0.9697 | 29 | 327 |
|