F055361
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 109 | 32 | 107 | 190 |
Family's Representative Sequence
| Representative Sequence | 3300042876|Ga0451577_0000174|Ga0451577_0000174_72970_73641 |
| Length | 223 |
| Sequence | VSWVDSAAAAGYKIAIFMRIPEEMHRKYQRREAGGMETTKLGARVKALRESKKVGLEELAARTNLPLALLEALETQDVYPSLGPLLRISRALGVRLGTFLDDEHGADPLVVRVAGRHEDFAMHDRSGSPASTRYFSLGRGKTDRHMEPFFIELFPGTGDEELSSHEGEELIIVHSGRVEVRHGAERRELGPGDSIYYNSVVPHHVGALGGEKAAIYAVIYLPR |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2523533628 | Maridesulfovibrio zosterae DSM 11974 | Isolate | Rhizosphere |
| 2 | 2740891818 | Desulfofaba hansenii DSM 12642 | Isolate | Unclassified |
| 3 | 3300028558 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG | Metagenome | Rhizosphere |
| 4 | 3300028573 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG | Metagenome | Rhizosphere |
| 5 | 3300028654 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG | Metagenome | Rhizosphere |
| 6 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 7 | 3300031235 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG | Metagenome | Rhizosphere |
| 8 | 3300031238 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG | Metagenome | Rhizosphere |
| 9 | 3300031241 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG | Metagenome | Rhizosphere |
| 10 | 3300031242 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG | Metagenome | Rhizosphere |
| 11 | 3300031247 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG | Metagenome | Rhizosphere |
| 12 | 3300031249 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG | Metagenome | Rhizosphere |
| 13 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 14 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 15 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 16 | 3300031712 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG | Metagenome | Rhizosphere |
| 17 | 3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Metagenome | Rhizosphere |
| 18 | 3300031728 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC | Metagenome | Rhizosphere |
| 19 | 3300033541 | Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 20 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 21 | 3300036647 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA | Metagenome | Rhizosphere |
| 22 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 23 | 3300038726 | Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 | Metagenome | Unclassified |
| 24 | 3300039062 | Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 | Metagenome | Unclassified |
| 25 | 3300041456 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG | Metagenome | Rhizoplane |
| 26 | 3300041511 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG | Metagenome | Unclassified |
| 27 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 28 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 29 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 30 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 31 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 32 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 97.25 |
| Metatranscriptomes | 0.92 |
| Isolates | 1.83 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 0 |
| Nodule | 0 |
| Rhizoplane | 0.92 |
| Rhizosphere | 88.99 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 10.09 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0265326_10065289 | 3300028558 | Unclassified | 1029 |
| 2 | Ga0265334_10105100 | 3300028573 | Unclassified | 1019 |
| 3 | Ga0265322_10003771 | 3300028654 | Bacteria | 4556 |
| 4 | Ga0265338_10091664 | 3300028800 | Bacteria | 2510 |
| 5 | Ga0265330_10014975 | 3300031235 | Bacteria | 3590 |
| 6 | Ga0265332_10125073 | 3300031238 | Bacteria | 1079 |
| 7 | Ga0265325_10093535 | 3300031241 | Bacteria | 1479 |
| 8 | Ga0265329_10004007 | 3300031242 | Bacteria | 6273 |
| 9 | Ga0265340_10040973 | 3300031247 | Unclassified | 2279 |
| 10 | Ga0265340_10125202 | 3300031247 | Unclassified | 1181 |
| 11 | Ga0265339_10132872 | 3300031249 | Bacteria | 1271 |
| 12 | Ga0265327_10121476 | 3300031251 | Bacteria | 1237 |
| 13 | Ga0265316_10000466 | 3300031344 | Bacteria | 46064 |
| 14 | Ga0265316_10011019 | 3300031344 | Bacteria | 8200 |
| 15 | Ga0265316_10110993 | 3300031344 | Unclassified | 2076 |
| 16 | Ga0265316_10227566 | 3300031344 | Unclassified | 1374 |
| 17 | Ga0265316_10290156 | 3300031344 | Unclassified | 1194 |
| 18 | Ga0265316_10600698 | 3300031344 | Unclassified | 780 |
| 19 | Ga0265314_10052996 | 3300031711 | Bacteria | 2816 |
| 20 | Ga0265342_10015145 | 3300031712 | Bacteria | 5085 |
| 21 | Ga0265342_10191770 | 3300031712 | Bacteria | 1115 |
| 22 | Ga0316576_10002156 | 3300031727 | Bacteria | 11096 |
| 23 | Ga0316576_10091566 | 3300031727 | Unclassified | 2266 |
| 24 | Ga0316576_10569773 | 3300031727 | Bacteria | 828 |
| 25 | Ga0316578_10141831 | 3300031728 | Bacteria | 1447 |
| 26 | Ga0316596_1069155 | 3300033541 | Bacteria | 945 |
| 27 | Ga0316574_0506355 | 3300035398 | Bacteria | 752 |
| 28 | Ga0316582_0018456 | 3300036647 | Bacteria | 4061 |
| 29 | Ga0316582_0133647 | 3300036647 | Bacteria | 1668 |
| 30 | Ga0316584_0004365 | 3300036712 | Bacteria | 9360 |
| 31 | Ga0316584_0190642 | 3300036712 | Bacteria | 1516 |
| 32 | Ga0400490_32130 | 3300038726 | Bacteria | 32229 |
| 33 | Ga0400483_008952 | 3300039062 | Bacteria | 1437 |
| 34 | Ga0451795_1316565 | 3300041456 | Bacteria | 926 |
| 35 | Ga0451855_0060980 | 3300041511 | Bacteria | 903 |
| 36 | Ga0451855_0150735 | 3300041511 | Bacteria | 1026 |
| 37 | Ga0451855_0723978 | 3300041511 | Bacteria | 1102 |
| 38 | Ga0451855_0907896 | 3300041511 | Bacteria | 1251 |
| 39 | Ga0451855_1087205 | 3300041511 | Bacteria | 2035 |
| 40 | Ga0451855_1487289 | 3300041511 | Bacteria | 766 |
| 41 | Ga0451855_1556056 | 3300041511 | Bacteria | 1144 |
| 42 | Ga0451855_2027497 | 3300041511 | Bacteria | 1321 |
| 43 | Ga0451577_0000048 | 3300042876 | Bacteria | 309377 |
| 44 | Ga0451577_0000174 | 3300042876 | Bacteria | 141920 |
| 45 | Ga0451577_0000617 | 3300042876 | Bacteria | 57184 |
| 46 | Ga0451577_0000695 | 3300042876 | Bacteria | 52708 |
| 47 | Ga0451577_0006754 | 3300042876 | Bacteria | 11380 |
| 48 | Ga0451577_0009845 | 3300042876 | Bacteria | 9158 |
| 49 | Ga0451577_0022107 | 3300042876 | Bacteria | 5810 |
| 50 | Ga0451577_0040924 | 3300042876 | Bacteria | 4161 |
| 51 | Ga0451577_0058522 | 3300042876 | Bacteria | 3435 |
| 52 | Ga0451577_0219301 | 3300042876 | Unclassified | 1719 |
| 53 | Ga0451577_0241824 | 3300042876 | Unclassified | 1633 |
| 54 | Ga0451577_0262069 | 3300042876 | Unclassified | 1565 |
| 55 | Ga0451577_0419009 | 3300042876 | Bacteria | 1216 |
| 56 | Ga0451577_0726397 | 3300042876 | Bacteria | 899 |
| 57 | Ga0451577_0956153 | 3300042876 | Bacteria | 770 |
| 58 | Ga0451577_1059719 | 3300042876 | Unclassified | 727 |
| 59 | Ga0451577_1138179 | 3300042876 | Bacteria | 697 |
| 60 | Ga0453683_0000010 | 3300044673 | Bacteria | 470890 |
| 61 | Ga0453683_0000078 | 3300044673 | Bacteria | 147056 |
| 62 | Ga0453683_0000136 | 3300044673 | Bacteria | 107540 |
| 63 | Ga0453683_0006566 | 3300044673 | Bacteria | 7970 |
| 64 | Ga0453683_0007481 | 3300044673 | Bacteria | 7404 |
| 65 | Ga0453683_0038745 | 3300044673 | Bacteria | 2996 |
| 66 | Ga0453683_0077035 | 3300044673 | Bacteria | 2088 |
| 67 | Ga0453683_0167345 | 3300044673 | Bacteria | 1392 |
| 68 | Ga0453683_0214033 | 3300044673 | Bacteria | 1224 |
| 69 | Ga0453683_0215452 | 3300044673 | Bacteria | 1220 |
| 70 | Ga0453683_0217791 | 3300044673 | Bacteria | 1213 |
| 71 | Ga0453684_0000161 | 3300044712 | Bacteria | 298175 |
| 72 | Ga0453684_0000202 | 3300044712 | Bacteria | 261894 |
| 73 | Ga0453684_0000308 | 3300044712 | Bacteria | 207298 |
| 74 | Ga0453684_0000547 | 3300044712 | Bacteria | 142253 |
| 75 | Ga0453684_0001044 | 3300044712 | Bacteria | 88749 |
| 76 | Ga0453684_0003018 | 3300044712 | Bacteria | 39143 |
| 77 | Ga0453684_0003735 | 3300044712 | Bacteria | 33712 |
| 78 | Ga0453684_0007444 | 3300044712 | Bacteria | 20121 |
| 79 | Ga0453684_0014173 | 3300044712 | Bacteria | 12805 |
| 80 | Ga0453684_0018745 | 3300044712 | Bacteria | 10595 |
| 81 | Ga0453684_0022513 | 3300044712 | Bacteria | 9341 |
| 82 | Ga0453684_0023832 | 3300044712 | Bacteria | 8984 |
| 83 | Ga0453684_0031361 | 3300044712 | Bacteria | 7473 |
| 84 | Ga0453684_0068064 | 3300044712 | Bacteria | 4523 |
| 85 | Ga0453684_0069567 | 3300044712 | Bacteria | 4463 |
| 86 | Ga0453684_0084450 | 3300044712 | Bacteria | 3948 |
| 87 | Ga0453684_0092779 | 3300044712 | Bacteria | 3721 |
| 88 | Ga0453684_0093068 | 3300044712 | Unclassified | 3713 |
| 89 | Ga0453684_0093237 | 3300044712 | Bacteria | 3710 |
| 90 | Ga0453684_0095276 | 3300044712 | Bacteria | 3659 |
| 91 | Ga0453684_0174639 | 3300044712 | Unclassified | 2529 |
| 92 | Ga0453684_0272854 | 3300044712 | Unclassified | 1932 |
| 93 | Ga0453684_0457371 | 3300044712 | Bacteria | 1420 |
| 94 | Ga0453684_0755375 | 3300044712 | Bacteria | 1052 |
| 95 | Ga0453684_1612137 | 3300044712 | Unclassified | 666 |
| 96 | Ga0451576_0000059 | 3300045051 | Bacteria | 296795 |
| 97 | Ga0451576_0000275 | 3300045051 | Bacteria | 126175 |
| 98 | Ga0451576_0000371 | 3300045051 | Bacteria | 106687 |
| 99 | Ga0451576_0003953 | 3300045051 | Bacteria | 19759 |
| 100 | Ga0451576_0010977 | 3300045051 | Bacteria | 10350 |
| 101 | Ga0451576_0013963 | 3300045051 | Bacteria | 8958 |
| 102 | Ga0451576_0035310 | 3300045051 | Bacteria | 5305 |
| 103 | Ga0451576_0052183 | 3300045051 | Bacteria | 4285 |
| 104 | Ga0451576_0252714 | 3300045051 | Unclassified | 1842 |
| 105 | Ga0451576_1023730 | 3300045051 | Unclassified | 865 |
| 106 | Ga0501048_0506034 | 3300049582 | Unclassified | 866 |
| 107 | Ga0501045_0594083 | 3300049824 | Bacteria | 820 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300042876 | Ga0451577_1059719 | Ga0451577_1059719_49_522 | 156 |
| 2 | 3300041511 | Ga0451855_0723978 | Ga0451855_0723978_91_675 | 175 |
| 3 | 3300041511 | Ga0451855_1087205 | Ga0451855_1087205_641_1225 | 175 |
| 4 | 3300035398 | Ga0316574_0506355 | Ga0316574_0506355_59_601 | 179 |
| 5 | 3300036647 | Ga0316582_0018456 | Ga0316582_0018456_1939_2481 | 179 |
| 6 | 3300036647 | Ga0316582_0133647 | Ga0316582_0133647_393_935 | 179 |
| 7 | 3300036712 | Ga0316584_0004365 | Ga0316584_0004365_6181_6723 | 179 |
| 8 | iso_pu_bacteria | 2523533628 | 2524001893 | 183 |
| 9 | iso_pu_bacteria | 2740891818 | 2740990699 | 184 |
| 10 | 3300042876 | Ga0451577_0058522 | Ga0451577_0058522_1095_1658 | 186 |
| 11 | 3300044712 | Ga0453684_0018745 | Ga0453684_0018745_4305_4868 | 186 |
| 12 | 3300031344 | Ga0265316_10290156 | Ga0265316_102901561 | 187 |
| 13 | 3300042876 | Ga0451577_0009845 | Ga0451577_0009845_5047_5613 | 187 |
| 14 | 3300044673 | Ga0453683_0167345 | Ga0453683_0167345_170_736 | 187 |
| 15 | 3300044712 | Ga0453684_0014173 | Ga0453684_0014173_4539_5105 | 187 |
| 16 | 3300044712 | Ga0453684_0069567 | Ga0453684_0069567_1542_2108 | 187 |
| 17 | 3300044712 | Ga0453684_0755375 | Ga0453684_0755375_432_998 | 187 |
| 18 | 3300031727 | Ga0316576_10002156 | Ga0316576_100021568 | 188 |
| 19 | 3300031728 | Ga0316578_10141831 | Ga0316578_101418312 | 188 |
| 20 | 3300033541 | Ga0316596_1069155 | Ga0316596_10691552 | 188 |
| 21 | 3300038726 | Ga0400490_32130 | Ga0400490_32130_900_1469 | 188 |
| 22 | 3300039062 | Ga0400483_008952 | Ga0400483_008952_477_1046 | 188 |
| 23 | 3300042876 | Ga0451577_0000174 | Ga0451577_0000174_72970_73641 | 188 |
| 24 | 3300042876 | Ga0451577_0000695 | Ga0451577_0000695_29331_29900 | 188 |
| 25 | 3300042876 | Ga0451577_0419009 | Ga0451577_0419009_62_631 | 188 |
| 26 | 3300044712 | Ga0453684_0000308 | Ga0453684_0000308_151489_152058 | 188 |
| 27 | 3300044712 | Ga0453684_0001044 | Ga0453684_0001044_23034_23705 | 188 |
| 28 | 3300044712 | Ga0453684_0007444 | Ga0453684_0007444_1171_1740 | 188 |
| 29 | 3300044712 | Ga0453684_0084450 | Ga0453684_0084450_782_1351 | 188 |
| 30 | 3300044712 | Ga0453684_0095276 | Ga0453684_0095276_241_822 | 188 |
| 31 | 3300028800 | Ga0265338_10091664 | Ga0265338_100916642 | 189 |
| 32 | 3300031727 | Ga0316576_10091566 | Ga0316576_100915662 | 189 |
| 33 | 3300036712 | Ga0316584_0190642 | Ga0316584_0190642_308_880 | 189 |
| 34 | 3300042876 | Ga0451577_0956153 | Ga0451577_0956153_52_624 | 189 |
| 35 | 3300044712 | Ga0453684_0272854 | Ga0453684_0272854_1137_1709 | 189 |
| 36 | 3300044712 | Ga0453684_1612137 | Ga0453684_1612137_78_650 | 189 |
| 37 | 3300028558 | Ga0265326_10065289 | Ga0265326_100652891 | 190 |
| 38 | 3300028573 | Ga0265334_10105100 | Ga0265334_101051002 | 190 |
| 39 | 3300028654 | Ga0265322_10003771 | Ga0265322_100037713 | 190 |
| 40 | 3300031235 | Ga0265330_10014975 | Ga0265330_100149755 | 190 |
| 41 | 3300031238 | Ga0265332_10125073 | Ga0265332_101250732 | 190 |
| 42 | 3300031241 | Ga0265325_10093535 | Ga0265325_100935352 | 190 |
| 43 | 3300031242 | Ga0265329_10004007 | Ga0265329_100040075 | 190 |
| 44 | 3300031247 | Ga0265340_10040973 | Ga0265340_100409732 | 190 |
| 45 | 3300031247 | Ga0265340_10125202 | Ga0265340_101252021 | 190 |
| 46 | 3300031249 | Ga0265339_10132872 | Ga0265339_101328722 | 190 |
| 47 | 3300031251 | Ga0265327_10121476 | Ga0265327_101214763 | 190 |
| 48 | 3300031344 | Ga0265316_10000466 | Ga0265316_100004662 | 190 |
| 49 | 3300031344 | Ga0265316_10011019 | Ga0265316_100110196 | 190 |
| 50 | 3300031344 | Ga0265316_10110993 | Ga0265316_101109932 | 190 |
| 51 | 3300031344 | Ga0265316_10227566 | Ga0265316_102275661 | 190 |
| 52 | 3300031344 | Ga0265316_10600698 | Ga0265316_106006982 | 190 |
| 53 | 3300031711 | Ga0265314_10052996 | Ga0265314_100529962 | 190 |
| 54 | 3300031712 | Ga0265342_10015145 | Ga0265342_100151455 | 190 |
| 55 | 3300031712 | Ga0265342_10191770 | Ga0265342_101917702 | 190 |
| 56 | 3300031727 | Ga0316576_10569773 | Ga0316576_105697731 | 190 |
| 57 | 3300041456 | Ga0451795_1316565 | Ga0451795_1316565_258_836 | 190 |
| 58 | 3300041511 | Ga0451855_0060980 | Ga0451855_0060980_199_783 | 190 |
| 59 | 3300041511 | Ga0451855_0150735 | Ga0451855_0150735_402_986 | 190 |
| 60 | 3300041511 | Ga0451855_0907896 | Ga0451855_0907896_334_918 | 190 |
| 61 | 3300041511 | Ga0451855_1487289 | Ga0451855_1487289_73_657 | 190 |
| 62 | 3300041511 | Ga0451855_1556056 | Ga0451855_1556056_490_1071 | 190 |
| 63 | 3300041511 | Ga0451855_2027497 | Ga0451855_2027497_389_970 | 190 |
| 64 | 3300042876 | Ga0451577_0000048 | Ga0451577_0000048_252590_253165 | 190 |
| 65 | 3300042876 | Ga0451577_0000617 | Ga0451577_0000617_26196_26771 | 190 |
| 66 | 3300042876 | Ga0451577_0006754 | Ga0451577_0006754_2718_3293 | 190 |
| 67 | 3300042876 | Ga0451577_0022107 | Ga0451577_0022107_1254_1829 | 190 |
| 68 | 3300042876 | Ga0451577_0040924 | Ga0451577_0040924_964_1539 | 190 |
| 69 | 3300042876 | Ga0451577_0219301 | Ga0451577_0219301_520_1095 | 190 |
| 70 | 3300042876 | Ga0451577_0241824 | Ga0451577_0241824_623_1198 | 190 |
| 71 | 3300042876 | Ga0451577_0262069 | Ga0451577_0262069_421_996 | 190 |
| 72 | 3300042876 | Ga0451577_0726397 | Ga0451577_0726397_245_820 | 190 |
| 73 | 3300042876 | Ga0451577_1138179 | Ga0451577_1138179_95_670 | 190 |
| 74 | 3300044673 | Ga0453683_0000010 | Ga0453683_0000010_47509_48084 | 190 |
| 75 | 3300044673 | Ga0453683_0000078 | Ga0453683_0000078_56213_56788 | 190 |
| 76 | 3300044673 | Ga0453683_0000136 | Ga0453683_0000136_80411_80986 | 190 |
| 77 | 3300044673 | Ga0453683_0006566 | Ga0453683_0006566_2526_3101 | 190 |
| 78 | 3300044673 | Ga0453683_0007481 | Ga0453683_0007481_5723_6298 | 190 |
| 79 | 3300044673 | Ga0453683_0038745 | Ga0453683_0038745_466_1041 | 190 |
| 80 | 3300044673 | Ga0453683_0077035 | Ga0453683_0077035_1045_1620 | 190 |
| 81 | 3300044673 | Ga0453683_0214033 | Ga0453683_0214033_310_885 | 190 |
| 82 | 3300044673 | Ga0453683_0215452 | Ga0453683_0215452_427_1002 | 190 |
| 83 | 3300044673 | Ga0453683_0217791 | Ga0453683_0217791_29_604 | 190 |
| 84 | 3300044712 | Ga0453684_0000161 | Ga0453684_0000161_241388_241963 | 190 |
| 85 | 3300044712 | Ga0453684_0000202 | Ga0453684_0000202_165961_166536 | 190 |
| 86 | 3300044712 | Ga0453684_0000547 | Ga0453684_0000547_54061_54636 | 190 |
| 87 | 3300044712 | Ga0453684_0003018 | Ga0453684_0003018_12879_13454 | 190 |
| 88 | 3300044712 | Ga0453684_0003735 | Ga0453684_0003735_2669_3244 | 190 |
| 89 | 3300044712 | Ga0453684_0022513 | Ga0453684_0022513_6982_7557 | 190 |
| 90 | 3300044712 | Ga0453684_0023832 | Ga0453684_0023832_6039_6614 | 190 |
| 91 | 3300044712 | Ga0453684_0031361 | Ga0453684_0031361_638_1213 | 190 |
| 92 | 3300044712 | Ga0453684_0068064 | Ga0453684_0068064_3616_4191 | 190 |
| 93 | 3300044712 | Ga0453684_0092779 | Ga0453684_0092779_431_1006 | 190 |
| 94 | 3300044712 | Ga0453684_0093068 | Ga0453684_0093068_16_591 | 190 |
| 95 | 3300044712 | Ga0453684_0093237 | Ga0453684_0093237_2140_2715 | 190 |
| 96 | 3300044712 | Ga0453684_0174639 | Ga0453684_0174639_1907_2482 | 190 |
| 97 | 3300044712 | Ga0453684_0457371 | Ga0453684_0457371_812_1387 | 190 |
| 98 | 3300045051 | Ga0451576_0000059 | Ga0451576_0000059_56213_56788 | 190 |
| 99 | 3300045051 | Ga0451576_0000275 | Ga0451576_0000275_30242_30817 | 190 |
| 100 | 3300045051 | Ga0451576_0000371 | Ga0451576_0000371_14241_14816 | 190 |
| 101 | 3300045051 | Ga0451576_0003953 | Ga0451576_0003953_6782_7357 | 190 |
| 102 | 3300045051 | Ga0451576_0010977 | Ga0451576_0010977_1699_2274 | 190 |
| 103 | 3300045051 | Ga0451576_0013963 | Ga0451576_0013963_7909_8484 | 190 |
| 104 | 3300045051 | Ga0451576_0035310 | Ga0451576_0035310_111_686 | 190 |
| 105 | 3300045051 | Ga0451576_0052183 | Ga0451576_0052183_3596_4171 | 190 |
| 106 | 3300045051 | Ga0451576_0252714 | Ga0451576_0252714_1116_1691 | 190 |
| 107 | 3300045051 | Ga0451576_1023730 | Ga0451576_1023730_160_735 | 190 |
| 108 | 3300049582 | Ga0501048_0506034 | Ga0501048_0506034_28_603 | 190 |
| 109 | 3300049824 | Ga0501045_0594083 | Ga0501045_0594083_68_643 | 190 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 4yba-assembly1.cif.gz_A | the structure of the c.kpn2i controller protein | 0.969 | 8 | 59 |
| 3zkc-assembly1.cif.gz_B | crystal structure of the master regulator for biofilm formation sinr in complex with dna. | 0.9615 | 7 | 67 |
| 3f52-assembly1.cif.gz_E | crystal structure of the clp gene regulator clgr from c. glutamicum | 0.9479 | 4 | 60 |
| 7zvi-assembly1.cif.gz_A-2 | non-canonical staphylococcus aureus pathogenicity island repression | 0.9457 | 7 | 57 |
| 1y7y-assembly1.cif.gz_A | high-resolution crystal structure of the restriction-modification controller protein c.ahdi from aeromonas hydrophila | 0.9447 | 2 | 65 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 4ybaA00 | Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains | 0.969 | 8 | 59 | 1.10.260.40 |
| 3zkcB00 | Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains | 0.9615 | 7 | 67 | 1.10.260.40 |
| 3qq6B00 | Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains | 0.9596 | 7 | 68 | 1.10.260.40 |
| 2l49B01 | Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains | 0.9552 | 8 | 56 | 1.10.260.40 |
| 3f52E00 | Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains | 0.9479 | 4 | 60 | 1.10.260.40 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A843EZV6-F1-model_v4 | Cupin domain-containing protein | 0.9446 | 101 | 187 |
|
| AF-A0A015SYI8-F1-model_v4 | deleted | 0.9442 | 93 | 190 |
|
| AF-A0A2G6QT69-F1-model_v4 | DNA-binding protein | 0.9411 | 100 | 190 |
GO:0003677
GO:0003700 GO:0005829 |
| AF-A0A7W1YEH9-F1-model_v4 | Cupin domain-containing protein | 0.9345 | 95 | 189 |
GO:0003700
GO:0005829 |
| AF-C2SQI9-F1-model_v4 | deleted | 0.9259 | 99 | 189 |
|
Predicted Structure (AlphaFold2)
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