F047586

General Info

Members Datasets Scaffolds Average Seq Length
108 79 216 252

Family's Representative Sequence

Representative Sequence 3300005467|Ga0070706_100008438|Ga0070706_10000843810
Length 294
Sequence MAKRRLDALLVDRGLAPDRQRAQALVMAGAVSVDERPAQKAGSLIDEEASLRLAERPRYVGRGGEKLEHALDVFGIDVSGLLVADIGASTGGFTDCLLQRGAERVYAIDSGKGQLDFRLRGDPRVVVMEGVNARTLESLPERVDLVTIDVSFISLRLVLPVVARLLGGEPNGDRPVASTNGRGSIVALFKPQFEARKEEVPRGGVIRDSQLHSVLVGRFVAWCVKNKFRVLGMTISPIAGADGNREFFFWLRQPKRPPSKDGSRRREARSQPREHRPVTIRGRSESATRPRSSR

Samples

Sample ID Description Type Environment
1 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
7 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
8 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
9 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
10 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
11 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
12 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
13 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
14 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
15 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
16 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
17 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
18 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
19 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
20 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
21 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
22 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
23 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
24 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
25 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
26 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
27 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
28 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
29 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
30 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
31 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
32 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
34 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
35 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
36 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
52 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
53 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
54 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
55 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
56 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
57 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
58 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
59 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
60 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
61 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
62 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
63 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
64 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
65 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
66 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
67 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
68 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
69 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
70 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
71 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
72 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
73 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
74 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
75 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
76 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
77 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
78 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
79 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.85
Rhizosphere 97.22
Stem 0
Stem Tuber 0
Unclassified 8.33

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070706_100008438 3300005467 Bacteria 9596
2 Ga0065712_10015092 3300005290 Bacteria 1530
3 Ga0065715_10025975 3300005293 Bacteria 2125
4 Ga0068869_100497739 3300005334 Bacteria 1017
5 Ga0068868_100200045 3300005338 Bacteria 1665
6 Ga0070675_100093203 3300005354 Bacteria 2526
7 Ga0070673_100007858 3300005364 Bacteria 7065
8 Ga0070703_10000824 3300005406 Bacteria 10073
9 Ga0070709_10000270 3300005434 Bacteria 33292
10 Ga0070711_100000031 3300005439 Bacteria 100629
11 Ga0070705_100000071 3300005440 Bacteria 54477
12 Ga0070705_100125436 3300005440 Bacteria 1665
13 Ga0070694_100050921 3300005444 Bacteria 2793
14 Ga0070694_100377475 3300005444 Bacteria 1105
15 Ga0070708_100151066 3300005445 Bacteria 2160
16 Ga0070708_100380448 3300005445 Bacteria 1331
17 Ga0070706_100000570 3300005467 Bacteria 43048
18 Ga0070706_100523022 3300005467 Unclassified 1104
19 Ga0070698_100231708 3300005471 Bacteria 1780
20 Ga0070699_100000987 3300005518 Bacteria 26487
21 Ga0070695_100020172 3300005545 Bacteria 4068
22 Ga0070696_100000735 3300005546 Bacteria 20927
23 Ga0070696_100140741 3300005546 Bacteria 1763
24 Ga0070693_100125108 3300005547 Bacteria 1599
25 Ga0070704_100018368 3300005549 Bacteria 4471
26 Ga0070704_100096561 3300005549 Bacteria 2216
27 Ga0070664_100511712 3300005564 Bacteria 1107
28 Ga0068854_100198662 3300005578 Bacteria 1575
29 Ga0081455_10004975 3300005937 Bacteria 14701
30 Ga0081538_10004195 3300005981 Bacteria 13367
31 Ga0081538_10013105 3300005981 Bacteria 6588
32 Ga0081538_10050800 3300005981 Bacteria 2498
33 Ga0070715_10233962 3300006163 Bacteria 952
34 Ga0070712_100142147 3300006175 Unclassified 1833
35 Ga0075428_100510377 3300006844 Bacteria 1286
36 Ga0075433_10114264 3300006852 Unclassified 2395
37 Ga0075434_100054914 3300006871 Bacteria 3958
38 Ga0075434_100474245 3300006871 Unclassified 1273
39 Ga0075436_100000104 3300006914 Bacteria 50049
40 Ga0075436_100000810 3300006914 Bacteria 20773
41 Ga0075436_100035343 3300006914 Unclassified 3448
42 Ga0075435_100015845 3300007076 Bacteria 5674
43 Ga0075435_100191749 3300007076 Bacteria 1730
44 Ga0105240_10000585 3300009093 Bacteria 67528
45 Ga0105240_10006418 3300009093 Bacteria 17287
46 Ga0105240_10638316 3300009093 Bacteria 1169
47 Ga0114129_10015843 3300009147 Bacteria 10720
48 Ga0114129_10490002 3300009147 Bacteria 1607
49 Ga0114129_10934184 3300009147 Bacteria 1097
50 Ga0105237_10001633 3300009545 Bacteria 29125
51 Ga0163163_10097449 3300014325 Bacteria 2961
52 Ga0157380_10910437 3300014326 Bacteria 906
53 Ga0207653_10000036 3300025885 Bacteria 101828
54 Ga0207685_10236998 3300025905 Unclassified 876
55 Ga0207699_10000049 3300025906 Bacteria 108746
56 Ga0207684_10000600 3300025910 Bacteria 43049
57 Ga0207695_10003133 3300025913 Bacteria 23637
58 Ga0207695_10190777 3300025913 Bacteria 1967
59 Ga0207695_10575822 3300025913 Bacteria 1007
60 Ga0207671_10005125 3300025914 Bacteria 12211
61 Ga0207663_10000154 3300025916 Bacteria 31682
62 Ga0207662_10155907 3300025918 Bacteria 1456
63 Ga0207650_10178146 3300025925 Bacteria 1693
64 Ga0207700_10637687 3300025928 Bacteria 949
65 Ga0207689_10420250 3300025942 Bacteria 1115
66 Ga0207651_10001779 3300025960 Bacteria 9999
67 Ga0207677_10117907 3300026023 Bacteria 1991
68 Ga0207648_10285612 3300026089 Bacteria 1476
69 Ga0207675_100182942 3300026118 Bacteria 2008
70 Ga0207675_100273858 3300026118 Bacteria 1639
71 Ga0265338_10001469 3300028800 Bacteria 38157
72 Ga0265338_10015136 3300028800 Bacteria 8508
73 Ga0265328_10022573 3300031239 Bacteria 2393
74 Ga0265314_10000584 3300031711 Bacteria 45886
75 Ga0316578_10214813 3300031728 Bacteria 1157
76 Ga0316578_10226487 3300031728 Bacteria 1123
77 Ga0307406_10362538 3300031901 Unclassified 1137
78 Ga0316583_10054089 3300032133 Bacteria 1412
79 Ga0373946_0172246 3300035171 Bacteria 1022
80 Ga0316574_0005728 3300035398 Bacteria 6655
81 Ga0373927_0009723 3300035695 Bacteria 6446
82 Ga0373947_0108618 3300035725 Bacteria 1751
83 Ga0316582_0003237 3300036647 Bacteria 7931
84 Ga0316582_0308102 3300036647 Bacteria 1088
85 Ga0316584_0068586 3300036712 Bacteria 2658
86 Ga0373925_0009024 3300037068 Bacteria 7262
87 Ga0373925_0209145 3300037068 Bacteria 1554
88 Ga0373925_0331463 3300037068 Bacteria 1233
89 Ga0316581_0030094 3300037588 Bacteria 1633
90 Ga0400486_23472 3300038742 Bacteria 1803
91 Ga0451807_1169433 3300041486 Bacteria 2049
92 Ga0451577_0083705 3300042876 Bacteria 2846
93 Ga0453683_0578242 3300044673 Bacteria 732
94 Ga0453684_0053274 3300044712 Bacteria 5282
95 Ga0495603_0036293 3300046455 Bacteria 2960
96 Ga0495647_0012525 3300046681 Bacteria 2922
97 Ga0496104_0146477 3300048907 Bacteria 2268
98 Ga0501034_0338454 3300049571 Bacteria 1435
99 Ga0501040_0421683 3300049576 Bacteria 959
100 nmdc:mga05p37_412338_c1 3300050507 Bacteria 1574
101 nmdc:mga0n895_56302_c1 3300050512 Bacteria 3873
102 nmdc:mga0n895_782781_c1 3300050512 Bacteria 945
103 nmdc:mga0rr50_175451_c1 3300050513 Bacteria 1749
104 nmdc:mga0rr50_539533_c1 3300050513 Bacteria 993
105 nmdc:mga0rr50_81483_c1 3300050513 Unclassified 2497
106 nmdc:mga08x19_111_c1 3300050514 Bacteria 71848
107 nmdc:mga08x19_17_c1 3300050514 Bacteria 313678
108 nmdc:mga0a205_195429_c1 3300050515 Unclassified 1914
109 Ga0070706_100008438
110 Ga0065712_10015092
111 Ga0065715_10025975
112 Ga0068869_100497739
113 Ga0068868_100200045
114 Ga0070675_100093203
115 Ga0070673_100007858
116 Ga0070703_10000824
117 Ga0070709_10000270
118 Ga0070711_100000031
119 Ga0070705_100000071
120 Ga0070705_100125436
121 Ga0070694_100050921
122 Ga0070694_100377475
123 Ga0070708_100151066
124 Ga0070708_100380448
125 Ga0070706_100000570
126 Ga0070706_100523022
127 Ga0070698_100231708
128 Ga0070699_100000987
129 Ga0070695_100020172
130 Ga0070696_100000735
131 Ga0070696_100140741
132 Ga0070693_100125108
133 Ga0070704_100018368
134 Ga0070704_100096561
135 Ga0070664_100511712
136 Ga0068854_100198662
137 Ga0081455_10004975
138 Ga0081538_10004195
139 Ga0081538_10013105
140 Ga0081538_10050800
141 Ga0070715_10233962
142 Ga0070712_100142147
143 Ga0075428_100510377
144 Ga0075433_10114264
145 Ga0075434_100054914
146 Ga0075434_100474245
147 Ga0075436_100000104
148 Ga0075436_100000810
149 Ga0075436_100035343
150 Ga0075435_100015845
151 Ga0075435_100191749
152 Ga0105240_10000585
153 Ga0105240_10006418
154 Ga0105240_10638316
155 Ga0114129_10015843
156 Ga0114129_10490002
157 Ga0114129_10934184
158 Ga0105237_10001633
159 Ga0163163_10097449
160 Ga0157380_10910437
161 Ga0207653_10000036
162 Ga0207685_10236998
163 Ga0207699_10000049
164 Ga0207684_10000600
165 Ga0207695_10003133
166 Ga0207695_10190777
167 Ga0207695_10575822
168 Ga0207671_10005125
169 Ga0207663_10000154
170 Ga0207662_10155907
171 Ga0207650_10178146
172 Ga0207700_10637687
173 Ga0207689_10420250
174 Ga0207651_10001779
175 Ga0207677_10117907
176 Ga0207648_10285612
177 Ga0207675_100182942
178 Ga0207675_100273858
179 Ga0265338_10001469
180 Ga0265338_10015136
181 Ga0265328_10022573
182 Ga0265314_10000584
183 Ga0316578_10214813
184 Ga0316578_10226487
185 Ga0307406_10362538
186 Ga0316583_10054089
187 Ga0373946_0172246
188 Ga0316574_0005728
189 Ga0373927_0009723
190 Ga0373947_0108618
191 Ga0316582_0003237
192 Ga0316582_0308102
193 Ga0316584_0068586
194 Ga0373925_0009024
195 Ga0373925_0209145
196 Ga0373925_0331463
197 Ga0316581_0030094
198 Ga0400486_23472
199 Ga0451807_1169433
200 Ga0451577_0083705
201 Ga0453683_0578242
202 Ga0453684_0053274
203 Ga0495603_0036293
204 Ga0495647_0012525
205 Ga0496104_0146477
206 Ga0501034_0338454
207 Ga0501040_0421683
208 nmdc:mga05p37_412338_c1
209 nmdc:mga0n895_56302_c1
210 nmdc:mga0n895_782781_c1
211 nmdc:mga0rr50_175451_c1
212 nmdc:mga0rr50_539533_c1
213 nmdc:mga0rr50_81483_c1
214 nmdc:mga08x19_111_c1
215 nmdc:mga08x19_17_c1
216 nmdc:mga0a205_195429_c1

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01728

FtsJ

FtsJ-like methyltransferase

59

253

0.97

PF01479

S4

S4 domain

4

51

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
3opn-assembly1.cif.gz_A the crystal structure of a putative hemolysin from lactococcus lactis 0.964 57 242
5eov-assembly1.cif.gz_A c-terminal domain of the 16s/23s rrna (cytidine-2'-o)-methyltransferase tlya. 0.9459 62 243
5wxm-assembly1.cif.gz_A crystal structure of the imp3 and mpp10 complex 0.9376 6 54
7pic-assembly1.cif.gz_C 70s ribosome with p/e-site trna in spectinomycin-treated mycoplasma pneumoniae cells 0.9053 6 56
1h3e-assembly1.cif.gz_A-2 tyrosyl-trna synthetase from thermus thermophilus complexed with wild-type trnatyr(gua) and with atp and tyrosinol 0.9017 4 55
ID Description Score Start End Superfamily
af_C0P590_106_292_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9598 67 243 3.40.50.150
af_Q8I5D3_12_67_3.10.290.10 Alpha Beta;Roll;Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A;RNA-binding S4 domain 0.9549 5 55 3.10.290.10
3opnA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9465 57 242 3.40.50.150
5eovA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9459 62 243 3.40.50.150
af_Q9XPI8_145_195_3.10.290.10 Alpha Beta;Roll;Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A;RNA-binding S4 domain 0.9367 6 53 3.10.290.10
ID Description Score Start End GO Terms
AF-A0A3E0KKI0-F1-model_v4 TlyA family rRNA (Cytidine-2'-O)-methyltransferase 0.9846 62 239 GO:0008168
GO:0032259
AF-A0A453HFZ1-F1-model_v4 Ribosomal RNA methyltransferase FtsJ domain-containing protein 0.9835 64 157 GO:0008168
GO:0032259
AF-A0A0H2UQB2-F1-model_v4 Putative hemolysin A 0.9809 73 241 GO:0008168
GO:0032259
AF-V6U6Y3-F1-model_v4 deleted 0.9809 77 239
AF-A0A832BVT6-F1-model_v4 deleted 0.9804 77 242

Map