F046082
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 107 | 91 | 214 | 393 |
Family's Representative Sequence
| Representative Sequence | iso_pu_bacteria|8055066027|8055070983 |
| Length | 449 |
| Sequence | LVGTLYLRAWESRLPAPILGDHYAAEAVDRIDYDFASVLCRSENHDQGETMTDIVKRYDIPDRLFWLHGTRSGPPVEYDAAAGMWNVYGYPEMQAVLGDPATFSSDTMRVVPPSMKPDSSEFSLDGFITQIDPPEHGKLRKLVSSAFTRKVVADLEPRIAALTHELLDEARDRGRVELVTDLAYPLPVIVIAELLGVPSSDRALFKRWADALFQRDAKISIAESAGPQEVDLQATLGPWKEMADYLAAHAAERKRQPRADLLTRLVQAEVDGERLPDDQVVNFAIVLLLAGHITTTMLLGNTVLCLDAHPEQQDRIRADRASIPAAIEESLRLFTPFALLARATTRETELGGVTIPADQLVMIWLGSANRDPRQFADPAAFDPGRAPNPHLAFGHGIHFCLGAPLARLEGRVALNILLDRFDPLRTDPNDPVQFMPAPTMTGIRHLPLV |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 2 | 3300003373 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 | Metagenome | Rhizosphere |
| 3 | 3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Metagenome | Rhizosphere |
| 4 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 5 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 6 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 8 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 9 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 10 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 12 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 13 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 14 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 15 | 3300005981 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 | Metagenome | Rhizosphere |
| 16 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 18 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 19 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 20 | 3300020080 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 21 | 3300025302 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 22 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 23 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 24 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 25 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 26 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 27 | 3300030521 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM | Metagenome | Unclassified |
| 28 | 3300031240 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG | Metagenome | Rhizosphere |
| 29 | 3300031507 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM | Metagenome | Unclassified |
| 30 | 3300031838 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM | Metagenome | Unclassified |
| 31 | 3300033179 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM | Metagenome | Unclassified |
| 32 | 3300033180 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM | Metagenome | Unclassified |
| 33 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 34 | 3300042007 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 | Metagenome | Rhizosphere |
| 35 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 36 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 37 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 38 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 39 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 40 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 41 | 3300044735 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R | Metagenome | Rhizosphere |
| 42 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 43 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 44 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 45 | 3300046460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere | Metagenome | Rhizosphere |
| 46 | 3300046492 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere | Metagenome | Rhizosphere |
| 47 | 3300046691 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere | Metagenome | Rhizosphere |
| 48 | 3300046794 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere | Metagenome | Rhizosphere |
| 49 | 3300047447 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere | Metagenome | Rhizosphere |
| 50 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 51 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 52 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 53 | 3300061719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 | Metagenome | Rhizosphere |
| 54 | 8055066027 | Sphaerisporangium corydalis NEAU-YHS15 | Isolate | Unclassified |
| 55 | 2540341094 | Bacillus subtilis XF-1 | Isolate | Rhizosphere |
| 56 | 2558860280 | Kutzneria sp. 744 | Isolate | Unclassified |
| 57 | 2585427649 | Amycolatopsis japonica MG417-CF17, DSM 44213 | Isolate | Unclassified |
| 58 | 2643221578 | Streptomyces sp. Root63 | Isolate | Unclassified |
| 59 | 2643221673 | Streptomyces sp. Root1295 | Isolate | Unclassified |
| 60 | 2675903058 | Actinopolymorpha cephalotaxi CPCC 202808 | Isolate | Rhizosphere |
| 61 | 2687453743 | Frankia colletiae Cc1.17 | Isolate | Nodule |
| 62 | 2791355406 | Streptomyces rhizosphaericus NRRL B-24304 | Isolate | Unclassified |
| 63 | 2808606399 | Bacillus sp. SJZ110 | Isolate | Rhizosphere |
| 64 | 2808606522 | Amycolatopsis sp. BJA-103 | Isolate | Unclassified |
| 65 | 2827628540 | Actinopolymorpha cephalotaxi DSM 45117 | Isolate | Rhizosphere |
| 66 | 2831905167 | Ammoniphilus oxalaticus RAOx-1 | Isolate | Rhizosphere |
| 67 | 2852635781 | Streptomyces sp. AK010 | Isolate | Rhizosphere |
| 68 | 2860837431 | Bacillus sp. WR11 | Isolate | Unclassified |
| 69 | 2862507626 | Streptomyces sp. NWU339 | Isolate | Unclassified |
| 70 | 2866612099 | Amycolatopsis suaedae 8-3EHSu | Isolate | Unclassified |
| 71 | 2884693830 | Nonomuraea phyllanthi WYY166 | Isolate | Unclassified |
| 72 | 2895427314 | Nonomuraea sp. PA05 | Isolate | Unclassified |
| 73 | 2895442618 | Nonomuraea phyllanthi PA1-10 | Isolate | Unclassified |
| 74 | 2899359706 | Amycolatopsis anabasis EGI 650086 | Isolate | Unclassified |
| 75 | 2915768154 | Amycolatopsis pittospori PIP199 | Isolate | Unclassified |
| 76 | 2946045630 | Streptomyces sp. W4I9-2 | Isolate | Rhizosphere |
| 77 | 2947224130 | Streptomyces afghaniensis W1I20 | Isolate | Rhizosphere |
| 78 | 2962290636 | Bacillus subtilis TLO3 | Isolate | Rhizosphere |
| 79 | 2969136845 | Bacillus subtilis TLO3 | Isolate | Rhizosphere |
| 80 | 2969765954 | Bacillus intestinalis GM2 | Isolate | Rhizosphere |
| 81 | 2969770375 | Bacillus subtilis GM5 | Isolate | Rhizosphere |
| 82 | 2980492589 | Bacillus subtilis GQJK2 | Isolate | Rhizosphere |
| 83 | 2997451912 | Streptomyces piniterrae jys28 | Isolate | Rhizosphere |
| 84 | 2997600082 | Streptomyces coffeae CA1R205 | Isolate | Unclassified |
| 85 | 3006486233 | Streptomyces sp. BR123 | Isolate | Rhizosphere |
| 86 | 8022653035 | Bacillus sp. Rc4 | Isolate | Unclassified |
| 87 | 8053945823 | Actinomadura terrae OS3-83 | Isolate | Rhizosphere |
| 88 | 8056060235 | Nocardiopsis endophytica RSe5-2 | Isolate | Unclassified |
| 89 | 8056207758 | Saccharopolyspora indica KCTC 29208 | Isolate | Rhizosphere |
| 90 | 8056447290 | Streptomyces huiliensis SCA2-4 | Isolate | Rhizosphere |
| 91 | 8056829672 | Streptomyces barringtoniae JA03 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 62.62 |
| Metatranscriptomes | 0.93 |
| Isolates | 36.45 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 2.8 |
| Nodule | 1.87 |
| Rhizoplane | 0 |
| Rhizosphere | 67.29 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0.93 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | rootH2_10001118 | 3300003320 | Bacteria | 3170 |
| 2 | JGI25407J50210_10000573 | 3300003373 | Bacteria | 7430 |
| 3 | Ga0070666_10125676 | 3300005335 | Bacteria | 1780 |
| 4 | Ga0070667_100182516 | 3300005367 | Bacteria | 1856 |
| 5 | Ga0070708_100011410 | 3300005445 | Bacteria | 7231 |
| 6 | Ga0070663_100001758 | 3300005455 | Bacteria | 12054 |
| 7 | Ga0070706_100036922 | 3300005467 | Bacteria | 4513 |
| 8 | Ga0070706_100078051 | 3300005467 | Bacteria | 3066 |
| 9 | Ga0070707_100004015 | 3300005468 | Bacteria | 13845 |
| 10 | Ga0070698_100094871 | 3300005471 | Unclassified | 2962 |
| 11 | Ga0070699_100005565 | 3300005518 | Bacteria | 11045 |
| 12 | Ga0070699_100182060 | 3300005518 | Bacteria | 1865 |
| 13 | Ga0070697_100017011 | 3300005536 | Bacteria | 5717 |
| 14 | Ga0070697_100020847 | 3300005536 | Bacteria | 5188 |
| 15 | Ga0068853_100121080 | 3300005539 | Bacteria | 2334 |
| 16 | Ga0068857_100225667 | 3300005577 | Bacteria | 1712 |
| 17 | Ga0068852_100132044 | 3300005616 | Bacteria | 2301 |
| 18 | Ga0081538_10000346 | 3300005981 | Bacteria | 52797 |
| 19 | Ga0070717_10060907 | 3300006028 | Bacteria | 3126 |
| 20 | Ga0105240_10065237 | 3300009093 | Bacteria | 4520 |
| 21 | Ga0114129_10007197 | 3300009147 | Bacteria | 15834 |
| 22 | Ga0114129_10123515 | 3300009147 | Bacteria | 3560 |
| 23 | Ga0114129_10234539 | 3300009147 | Bacteria | 2470 |
| 24 | Ga0105238_10037962 | 3300009551 | Bacteria | 4895 |
| 25 | Ga0206350_10234467 | 3300020080 | Bacteria | 1461 |
| 26 | Ga0207426_1002501 | 3300025302 | Bacteria | 11613 |
| 27 | Ga0207426_1005261 | 3300025302 | Bacteria | 5964 |
| 28 | Ga0207684_10063976 | 3300025910 | Bacteria | 3123 |
| 29 | Ga0207684_10066266 | 3300025910 | Bacteria | 3067 |
| 30 | Ga0207646_10007606 | 3300025922 | Bacteria | 10976 |
| 31 | Ga0207668_10020550 | 3300025972 | Bacteria | 4197 |
| 32 | Ga0207678_10006845 | 3300026067 | Bacteria | 10111 |
| 33 | Ga0307515_10033501 | 3300028794 | Bacteria | 8452 |
| 34 | Ga0307511_10003729 | 3300030521 | Bacteria | 15578 |
| 35 | Ga0265320_10048759 | 3300031240 | Bacteria | 2065 |
| 36 | Ga0307509_10002378 | 3300031507 | Bacteria | 30613 |
| 37 | Ga0307518_10000423 | 3300031838 | Bacteria | 32539 |
| 38 | Ga0307507_10020994 | 3300033179 | Bacteria | 7291 |
| 39 | Ga0307510_10005429 | 3300033180 | Bacteria | 15175 |
| 40 | Ga0307510_10030300 | 3300033180 | Bacteria | 6135 |
| 41 | Ga0436364_0199006 | 3300037853 | Bacteria | 6341 |
| 42 | Ga0436364_1264133 | 3300037853 | Bacteria | 5354 |
| 43 | Ga0436364_1376396 | 3300037853 | Bacteria | 1767 |
| 44 | Ga0439449_0054824 | 3300042007 | Bacteria | 1473 |
| 45 | Ga0466969_0005133 | 3300044656 | Bacteria | 6965 |
| 46 | Ga0466969_0033666 | 3300044656 | Bacteria | 2601 |
| 47 | Ga0466972_0001487 | 3300044658 | Bacteria | 11396 |
| 48 | Ga0466972_0077500 | 3300044658 | Bacteria | 1583 |
| 49 | Ga0466965_0082888 | 3300044683 | Bacteria | 1623 |
| 50 | Ga0466966_0016302 | 3300044684 | Bacteria | 4914 |
| 51 | Ga0466961_0042650 | 3300044693 | Bacteria | 2908 |
| 52 | Ga0466963_0055020 | 3300044694 | Bacteria | 2646 |
| 53 | Ga0466968_0033174 | 3300044735 | Bacteria | 2151 |
| 54 | Ga0466970_0005770 | 3300044765 | Bacteria | 6153 |
| 55 | Ga0466960_0001202 | 3300044901 | Bacteria | 9324 |
| 56 | Ga0466960_0013339 | 3300044901 | Bacteria | 3489 |
| 57 | Ga0466967_0121579 | 3300045976 | Bacteria | 2413 |
| 58 | Ga0466967_0200465 | 3300045976 | Bacteria | 1890 |
| 59 | Ga0495638_0022730 | 3300046460 | Bacteria | 4113 |
| 60 | Ga0495585_0060815 | 3300046492 | Bacteria | 2078 |
| 61 | Ga0495670_0093414 | 3300046691 | Bacteria | 1542 |
| 62 | Ga0495589_0001594 | 3300046794 | Bacteria | 13003 |
| 63 | Ga0495685_000295 | 3300047447 | Bacteria | 16457 |
| 64 | Ga0496126_0001013 | 3300048929 | Bacteria | 47866 |
| 65 | nmdc:mga05p37_154519_c1 | 3300050507 | Bacteria | 2805 |
| 66 | Ga0500559_0004046 | 3300053136 | Bacteria | 7038 |
| 67 | Ga0466962_0003161 | 3300061719 | Bacteria | 7824 |
| 68 | Ga0466962_0030955 | 3300061719 | Bacteria | 2562 |
| 69 | 8055070983 | 8055066027 | Bacteria | 9479577 |
| 70 | 2540607901 | 2540341094 | Bacteria | 4061186 |
| 71 | 2559432068 | 2558860280 | Bacteria | 11429938 |
| 72 | 2586058224 | 2585427649 | Bacteria | 9053857 |
| 73 | 2643904217 | 2643221578 | Bacteria | 9213798 |
| 74 | 2644402572 | 2643221673 | Bacteria | 9196637 |
| 75 | 2676477655 | 2675903058 | Bacteria | 6822861 |
| 76 | 2689991682 | 2687453743 | Bacteria | 8361025 |
| 77 | 2689991685 | 2687453743 | Bacteria | 8361025 |
| 78 | 2793979009 | 2791355406 | Bacteria | 11364898 |
| 79 | 2809056268 | 2808606399 | Bacteria | 4021018 |
| 80 | 2809592920 | 2808606522 | Bacteria | 9488490 |
| 81 | 2827634429 | 2827628540 | Bacteria | 6858585 |
| 82 | 2831907356 | 2831905167 | Bacteria | 3319172 |
| 83 | 2852641859 | 2852635781 | Bacteria | 8251373 |
| 84 | 2860840680 | 2860837431 | Bacteria | 4202080 |
| 85 | 2862512313 | 2862507626 | Bacteria | 9425308 |
| 86 | 2866614202 | 2866612099 | Bacteria | 7543886 |
| 87 | 2884703848 | 2884693830 | Bacteria | 11273186 |
| 88 | 2895438622 | 2895427314 | Bacteria | 13147766 |
| 89 | 2895448796 | 2895442618 | Bacteria | 11027144 |
| 90 | 2899365065 | 2899359706 | Bacteria | 10940472 |
| 91 | 2915768184 | 2915768154 | Bacteria | 8424322 |
| 92 | 2946047189 | 2946045630 | Bacteria | 8527308 |
| 93 | 2947232298 | 2947224130 | Bacteria | 9938529 |
| 94 | 2962293899 | 2962290636 | Bacteria | 4072939 |
| 95 | 2969139885 | 2969136845 | Bacteria | 3923176 |
| 96 | 2969769647 | 2969765954 | Bacteria | 4216713 |
| 97 | 2969772710 | 2969770375 | Bacteria | 4271280 |
| 98 | 2980495674 | 2980492589 | Bacteria | 4072961 |
| 99 | 2997452332 | 2997451912 | Bacteria | 8492419 |
| 100 | 2997601228 | 2997600082 | Bacteria | 9896405 |
| 101 | 3006486242 | 3006486233 | Bacteria | 8157040 |
| 102 | 8022654839 | 8022653035 | Bacteria | 4035078 |
| 103 | 8053953446 | 8053945823 | Bacteria | 8962862 |
| 104 | 8056061495 | 8056060235 | Bacteria | 7259403 |
| 105 | 8056215098 | 8056207758 | Bacteria | 8639239 |
| 106 | 8056448391 | 8056447290 | Bacteria | 7680491 |
| 107 | 8056832903 | 8056829672 | Bacteria | 9045328 |
| 108 | rootH2_10001118 | |||
| 109 | JGI25407J50210_10000573 | |||
| 110 | Ga0070666_10125676 | |||
| 111 | Ga0070667_100182516 | |||
| 112 | Ga0070708_100011410 | |||
| 113 | Ga0070663_100001758 | |||
| 114 | Ga0070706_100036922 | |||
| 115 | Ga0070706_100078051 | |||
| 116 | Ga0070707_100004015 | |||
| 117 | Ga0070698_100094871 | |||
| 118 | Ga0070699_100005565 | |||
| 119 | Ga0070699_100182060 | |||
| 120 | Ga0070697_100017011 | |||
| 121 | Ga0070697_100020847 | |||
| 122 | Ga0068853_100121080 | |||
| 123 | Ga0068857_100225667 | |||
| 124 | Ga0068852_100132044 | |||
| 125 | Ga0081538_10000346 | |||
| 126 | Ga0070717_10060907 | |||
| 127 | Ga0105240_10065237 | |||
| 128 | Ga0114129_10007197 | |||
| 129 | Ga0114129_10123515 | |||
| 130 | Ga0114129_10234539 | |||
| 131 | Ga0105238_10037962 | |||
| 132 | Ga0206350_10234467 | |||
| 133 | Ga0207426_1002501 | |||
| 134 | Ga0207426_1005261 | |||
| 135 | Ga0207684_10063976 | |||
| 136 | Ga0207684_10066266 | |||
| 137 | Ga0207646_10007606 | |||
| 138 | Ga0207668_10020550 | |||
| 139 | Ga0207678_10006845 | |||
| 140 | Ga0307515_10033501 | |||
| 141 | Ga0307511_10003729 | |||
| 142 | Ga0265320_10048759 | |||
| 143 | Ga0307509_10002378 | |||
| 144 | Ga0307518_10000423 | |||
| 145 | Ga0307507_10020994 | |||
| 146 | Ga0307510_10005429 | |||
| 147 | Ga0307510_10030300 | |||
| 148 | Ga0436364_0199006 | |||
| 149 | Ga0436364_1264133 | |||
| 150 | Ga0436364_1376396 | |||
| 151 | Ga0439449_0054824 | |||
| 152 | Ga0466969_0005133 | |||
| 153 | Ga0466969_0033666 | |||
| 154 | Ga0466972_0001487 | |||
| 155 | Ga0466972_0077500 | |||
| 156 | Ga0466965_0082888 | |||
| 157 | Ga0466966_0016302 | |||
| 158 | Ga0466961_0042650 | |||
| 159 | Ga0466963_0055020 | |||
| 160 | Ga0466968_0033174 | |||
| 161 | Ga0466970_0005770 | |||
| 162 | Ga0466960_0001202 | |||
| 163 | Ga0466960_0013339 | |||
| 164 | Ga0466967_0121579 | |||
| 165 | Ga0466967_0200465 | |||
| 166 | Ga0495638_0022730 | |||
| 167 | Ga0495585_0060815 | |||
| 168 | Ga0495670_0093414 | |||
| 169 | Ga0495589_0001594 | |||
| 170 | Ga0495685_000295 | |||
| 171 | Ga0496126_0001013 | |||
| 172 | nmdc:mga05p37_154519_c1 | |||
| 173 | Ga0500559_0004046 | |||
| 174 | Ga0466962_0003161 | |||
| 175 | Ga0466962_0030955 | |||
| 176 | 8055070983 | |||
| 177 | 2540607901 | |||
| 178 | 2559432068 | |||
| 179 | 2586058224 | |||
| 180 | 2643904217 | |||
| 181 | 2644402572 | |||
| 182 | 2676477655 | |||
| 183 | 2689991682 | |||
| 184 | 2689991685 | |||
| 185 | 2793979009 | |||
| 186 | 2809056268 | |||
| 187 | 2809592920 | |||
| 188 | 2827634429 | |||
| 189 | 2831907356 | |||
| 190 | 2852641859 | |||
| 191 | 2860840680 | |||
| 192 | 2862512313 | |||
| 193 | 2866614202 | |||
| 194 | 2884703848 | |||
| 195 | 2895438622 | |||
| 196 | 2895448796 | |||
| 197 | 2899365065 | |||
| 198 | 2915768184 | |||
| 199 | 2946047189 | |||
| 200 | 2947232298 | |||
| 201 | 2962293899 | |||
| 202 | 2969139885 | |||
| 203 | 2969769647 | |||
| 204 | 2969772710 | |||
| 205 | 2980495674 | |||
| 206 | 2997452332 | |||
| 207 | 2997601228 | |||
| 208 | 3006486242 | |||
| 209 | 8022654839 | |||
| 210 | 8053953446 | |||
| 211 | 8056061495 | |||
| 212 | 8056215098 | |||
| 213 | 8056448391 | |||
| 214 | 8056832903 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 5z9i-assembly1.cif.gz_A | identification of the functions of unusual cytochrome p450-like monooxygenases involved in microbial secondary metablism | 0.9433 | 11 | 400 |
| 5z9j-assembly1.cif.gz_A | identification of the functions of unusual cytochrome p450-like monooxygenases involved in microbial secondary metablism | 0.9407 | 10 | 400 |
| 5z9j-assembly2.cif.gz_B | identification of the functions of unusual cytochrome p450-like monooxygenases involved in microbial secondary metablism | 0.9396 | 15 | 400 |
| 7y9o-assembly1.cif.gz_A | crystal structure of a cyp109b4 variant from bacillus sonorensis | 0.9373 | 11 | 399 |
| 5z9j-assembly4.cif.gz_D | identification of the functions of unusual cytochrome p450-like monooxygenases involved in microbial secondary metablism | 0.9352 | 11 | 400 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 5z9jB00 | Mainly Alpha;Orthogonal Bundle;Cytochrome p450;Cytochrome P450 | 0.9396 | 15 | 400 | 1.10.630.10 |
| 3ejbD01 | Alpha Beta;2-Layer Sandwich;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2; | 0.9358 | 290 | 321 | 3.30.43.20 |
| 5vwsA00 | Mainly Alpha;Orthogonal Bundle;Cytochrome p450;Cytochrome P450 | 0.9274 | 14 | 399 | 1.10.630.10 |
| 2xfhA00 | Mainly Alpha;Orthogonal Bundle;Cytochrome p450;Cytochrome P450 | 0.9161 | 14 | 400 | 1.10.630.10 |
| 5z9jB00 | Mainly Alpha;Orthogonal Bundle;Cytochrome p450;Cytochrome P450 | 0.9148 | 15 | 400 | 1.10.630.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A3M1QFT3-F1-model_v4 | Cytochrome P450 | 0.9673 | 191 | 400 |
GO:0005506
GO:0006707 GO:0008395 GO:0020037 GO:0036199 |
| AF-E5WLF8-F1-model_v4 | deleted | 0.9673 | 219 | 400 |
|
| AF-A0A3D8WXR5-F1-model_v4 | Cytochrome P450 | 0.9619 | 237 | 400 |
GO:0004497
GO:0005506 GO:0016705 GO:0020037 |
| AF-A0A435Y6A4-F1-model_v4 | Cytochrome P450 | 0.9607 | 237 | 400 |
GO:0004497
GO:0005506 GO:0016705 GO:0020037 |
| AF-A0A7C3QNC8-F1-model_v4 | Cytochrome P450 | 0.9599 | 248 | 400 |
GO:0004497
GO:0005506 GO:0016705 GO:0020037 |