F029222
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 104 | 84 | 58 | 296 |
Family's Representative Sequence
| Representative Sequence | iso_pu_bacteria|2563366752|2563930643 |
| Length | 314 |
| Sequence | TSNMMSSQLMLNLNRNALQMNNTQNQLATGRKLNKPSDDPVGITYSLRYRGELASNEQYTKNVDGALSWLDFNDTVLNQAGDVVQRLRQLTVQASTGSNPQSALDSIKQEVGQLKEQLLDIANSKLNGKYIFNGETYDKKPYDFPKNADGTTNTTGLNADGTSNDKSMATLETDKGMIYYSVGESVQLPINLTGTDIFGNGGDPDNIFNIMDALTQSLTDGNFKGMTEQLDKIDSRMETILTTRAELGAKTNRIELMQGRLSDLNTNLTDLQSKTEDADYAELIMKSKIQENIYNASLSAGSKIIQPTLVDFLR |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2563366752 | Paenibacillus pini JCM 16418 | Isolate | Rhizosphere |
| 2 | 2571042588 | Paenibacillus zanthoxyli JH29 | Isolate | Unclassified |
| 3 | 2576861424 | Paenibacillus sabinae T27 | Isolate | Rhizosphere |
| 4 | 2600255286 | Paenibacillus sp. NFR01 | Isolate | Rhizoplane |
| 5 | 2643221543 | Paenibacillus sp. Root52 | Isolate | Unclassified |
| 6 | 2643221676 | Paenibacillus sp. Root444D2 | Isolate | Unclassified |
| 7 | 2671180694 | Paenibacillus sp. A3 | Isolate | Unclassified |
| 8 | 2728369359 | Paenibacillus polymyxa YC0136 | Isolate | Rhizosphere |
| 9 | 2791355222 | Paenibacillus oryzae 1DrF-4 | Isolate | Unclassified |
| 10 | 2821111986 | Paenibacillus illinoisensis 582 | Isolate | Unclassified |
| 11 | 2857453340 | Paenibacillus sp. R-74130 | Isolate | Unclassified |
| 12 | 2857472729 | Cohnella sp. R-74144 | Isolate | Unclassified |
| 13 | 2864997549 | Paenibacillus sp. R-72005 | Isolate | Unclassified |
| 14 | 2881636855 | Paenibacillus sp. 7197 | Isolate | Rhizosphere |
| 15 | 2885526491 | Paenibacillus sp. LK1 | Isolate | Rhizosphere |
| 16 | 2888578766 | Paenibacillus lycopersici 12200R-189 | Isolate | Rhizosphere |
| 17 | 2889042446 | Paenibacillus sp. 37 | Isolate | Rhizosphere |
| 18 | 2889049205 | Paenibacillus rhizovicinus 14171R-81 | Isolate | Rhizosphere |
| 19 | 2904113452 | Paenibacillus paridis py1325 | Isolate | Unclassified |
| 20 | 2904162308 | Paenibacillus sp. AD87 | Isolate | Unclassified |
| 21 | 2904490793 | Paenibacillus sp. 1295 | Isolate | Rhizosphere |
| 22 | 2907202186 | Paenibacillus sp. HJL G12 | Isolate | Unclassified |
| 23 | 2919160200 | Paenibacillus sp. 2003 | Isolate | Unclassified |
| 24 | 2919425241 | Bacillus sp. 3255 | Isolate | Rhizosphere |
| 25 | 2925326138 | Paenibacillus hemerocallicola KCTC 33185 | Isolate | Unclassified |
| 26 | 2929206907 | Paenibacillus sp. R-74146 Hybrid assembly | Isolate | Unclassified |
| 27 | 2929297113 | Heliophilum fasciatum MTM | Isolate | Rhizosphere |
| 28 | 2931384279 | Paenibacillus sp. DR312 | Isolate | Rhizosphere |
| 29 | 2936361878 | Neobacillus endophyticus BRMEA1 | Isolate | Unclassified |
| 30 | 2938649242 | Paenibacillus helianthi P26E | Isolate | Rhizosphere |
| 31 | 2939679117 | Paenibacillus sp. 4624 | Isolate | Rhizosphere |
| 32 | 2939702853 | Paenibacillus sp. PvR008 | Isolate | Rhizosphere |
| 33 | 2945991243 | Paenibacillus sp. B21a W2I17 | Isolate | Rhizosphere |
| 34 | 2946053406 | Paenibacillus sp. W4I10 | Isolate | Rhizosphere |
| 35 | 2968558590 | Paenibacillus sp. P3E | Isolate | Rhizosphere |
| 36 | 2971403814 | Paenibacillus tritici LMG 29502 | Isolate | Unclassified |
| 37 | 2971410472 | Paenibacillus oryzisoli 1ZS3-15 | Isolate | Unclassified |
| 38 | 2971511577 | Paenibacillus apii 7124 | Isolate | Rhizosphere |
| 39 | 2980176882 | Paenibacillus apii 7028 | Isolate | Rhizosphere |
| 40 | 2988225383 | Paenibacillus sp. P46E | Isolate | Rhizosphere |
| 41 | 2996632988 | Paenibacillus sp. P32E | Isolate | Rhizosphere |
| 42 | 3300002737 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA | Metagenome | Endosphere |
| 43 | 3300003187 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB | Metagenome | Endosphere |
| 44 | 3300003751 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 | Metagenome | Endosphere |
| 45 | 3300003761 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 | Metagenome | Endosphere |
| 46 | 3300003841 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 | Metagenome | Endosphere |
| 47 | 3300009011 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG | Metagenome | Rhizosphere |
| 48 | 3300009036 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG | Metagenome | Rhizosphere |
| 49 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 51 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 52 | 3300025224 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 53 | 3300025225 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 54 | 3300025233 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) | Metagenome | Endosphere |
| 55 | 3300025242 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 56 | 3300025292 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 57 | 3300025294 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 58 | 3300025728 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 60 | 3300041404 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 | Metagenome | Rhizosphere |
| 61 | 3300041406 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 | Metagenome | Rhizosphere |
| 62 | 3300041999 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 | Metagenome | Rhizosphere |
| 63 | 3300042007 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 | Metagenome | Rhizosphere |
| 64 | 3300042015 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 | Metagenome | Rhizosphere |
| 65 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 66 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 67 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 68 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 69 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 70 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 71 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 72 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 73 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 74 | 3300049576 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 75 | 3300049578 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 76 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 77 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 78 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 79 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 80 | 8002317523 | Cohnella sp. GbtcB17 | Isolate | Unclassified |
| 81 | 8046991243 | Cohnella rhizosphaerae DSM 28161 | Isolate | Rhizosphere |
| 82 | 8054795415 | Paenibacillus periandrae PM10 | Isolate | Nodule |
| 83 | 8055632911 | Paenibacillus radicibacter N1-5-1-14 | Isolate | Unclassified |
| 84 | 8056533031 | Paenibacillus qinlingensis TEGT-2 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 55.77 |
| Metatranscriptomes | 0 |
| Isolates | 44.23 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 18.27 |
| Nodule | 0.96 |
| Rhizoplane | 0.96 |
| Rhizosphere | 45.19 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 34.62 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI25162J39368_1004321 | 3300002737 | Bacteria | 3373 |
| 2 | JGI25151J46595_10001734 | 3300003187 | Bacteria | 14175 |
| 3 | JGI25151J46595_10009486 | 3300003187 | Bacteria | 4602 |
| 4 | Ga0055538_1000452 | 3300003751 | Bacteria | 15491 |
| 5 | Ga0055535_1009351 | 3300003761 | Bacteria | 1696 |
| 6 | Ga0055541_1000196 | 3300003841 | Bacteria | 26396 |
| 7 | Ga0055541_1000806 | 3300003841 | Bacteria | 7747 |
| 8 | Ga0105251_10004765 | 3300009011 | Bacteria | 9082 |
| 9 | Ga0105244_10026044 | 3300009036 | Bacteria | 3170 |
| 10 | Ga0105244_10036868 | 3300009036 | Bacteria | 2558 |
| 11 | Ga0105244_10042253 | 3300009036 | Bacteria | 2358 |
| 12 | Ga0114129_10230885 | 3300009147 | Bacteria | 2492 |
| 13 | Ga0105246_10000485 | 3300011119 | Bacteria | 21476 |
| 14 | Ga0157371_10210078 | 3300013102 | Bacteria | 1396 |
| 15 | Ga0209784_100075 | 3300025224 | Bacteria | 139902 |
| 16 | Ga0209784_100485 | 3300025224 | Bacteria | 15977 |
| 17 | Ga0209566_100091 | 3300025225 | Bacteria | 141100 |
| 18 | Ga0209566_100387 | 3300025225 | Bacteria | 35683 |
| 19 | Ga0209566_100891 | 3300025225 | Bacteria | 14380 |
| 20 | Ga0209566_102244 | 3300025225 | Bacteria | 3780 |
| 21 | Ga0209437_100453 | 3300025233 | Bacteria | 33692 |
| 22 | Ga0209258_101334 | 3300025242 | Bacteria | 9094 |
| 23 | Ga0209676_1005597 | 3300025292 | Bacteria | 6490 |
| 24 | Ga0209025_1002667 | 3300025294 | Bacteria | 18226 |
| 25 | Ga0209025_1003725 | 3300025294 | Bacteria | 14000 |
| 26 | Ga0209025_1009550 | 3300025294 | Bacteria | 6737 |
| 27 | Ga0207655_1015571 | 3300025728 | Bacteria | 4215 |
| 28 | Ga0395899_0000860 | 3300037312 | Bacteria | 28994 |
| 29 | Ga0395899_0003246 | 3300037312 | Bacteria | 12886 |
| 30 | Ga0439436_0001040 | 3300041404 | Bacteria | 7791 |
| 31 | Ga0439439_0000909 | 3300041406 | Bacteria | 5471 |
| 32 | Ga0439433_0015175 | 3300041999 | Unclassified | 1700 |
| 33 | Ga0439449_0001353 | 3300042007 | Bacteria | 9610 |
| 34 | Ga0439449_0061638 | 3300042007 | Unclassified | 1384 |
| 35 | Ga0439462_0000731 | 3300042015 | Bacteria | 6789 |
| 36 | Ga0453684_0024561 | 3300044712 | Bacteria | 8803 |
| 37 | Ga0496116_0002717 | 3300048919 | Bacteria | 18216 |
| 38 | Ga0496116_0006506 | 3300048919 | Bacteria | 10587 |
| 39 | Ga0496116_0059469 | 3300048919 | Bacteria | 2485 |
| 40 | Ga0496121_0075499 | 3300048924 | Bacteria | 2692 |
| 41 | Ga0496121_0125946 | 3300048924 | Bacteria | 1926 |
| 42 | Ga0496122_0122607 | 3300048925 | Unclassified | 1672 |
| 43 | Ga0496122_0169325 | 3300048925 | Unclassified | 1319 |
| 44 | Ga0496123_0036068 | 3300048926 | Unclassified | 3513 |
| 45 | Ga0496124_0001688 | 3300048927 | Bacteria | 31277 |
| 46 | Ga0496124_0025827 | 3300048927 | Bacteria | 5310 |
| 47 | Ga0496125_0001318 | 3300048928 | Bacteria | 36700 |
| 48 | Ga0496125_0101279 | 3300048928 | Unclassified | 2120 |
| 49 | Ga0496125_0131051 | 3300048928 | Unclassified | 1765 |
| 50 | Ga0496126_0005151 | 3300048929 | Bacteria | 15119 |
| 51 | Ga0496126_0372540 | 3300048929 | Bacteria | 1164 |
| 52 | Ga0501036_0278545 | 3300049572 | Bacteria | 1400 |
| 53 | Ga0501040_0352764 | 3300049576 | Bacteria | 1054 |
| 54 | Ga0501042_0241844 | 3300049578 | Bacteria | 1302 |
| 55 | Ga0501047_0015856 | 3300049581 | Bacteria | 7180 |
| 56 | Ga0501070_0020875 | 3300049586 | Bacteria | 5495 |
| 57 | Ga0501079_0275524 | 3300049741 | Bacteria | 1315 |
| 58 | nmdc:mga05p37_602020_c1 | 3300050507 | Bacteria | 1240 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300013102 | Ga0157371_10210078 | Ga0157371_102100782 | 220 |
| 2 | 3300048919 | Ga0496116_0059469 | Ga0496116_0059469_1136_1987 | 232 |
| 3 | 3300048927 | Ga0496124_0025827 | Ga0496124_0025827_3617_4468 | 232 |
| 4 | iso_pu_bacteria | 8046991243 | 8046997173 | 239 |
| 5 | 3300025728 | Ga0207655_1015571 | Ga0207655_10155712 | 241 |
| 6 | 3300048924 | Ga0496121_0075499 | Ga0496121_0075499_38_892 | 241 |
| 7 | 3300048929 | Ga0496126_0372540 | Ga0496126_0372540_246_1100 | 241 |
| 8 | 3300044712 | Ga0453684_0024561 | Ga0453684_0024561_3367_4245 | 246 |
| 9 | 3300048928 | Ga0496125_0131051 | Ga0496125_0131051_400_1308 | 246 |
| 10 | iso_pu_bacteria | 2936361878 | 2936365848 | 247 |
| 11 | iso_pu_bacteria | 2929297113 | 2929299401 | 249 |
| 12 | iso_pu_bacteria | 8055632911 | 8055633222 | 249 |
| 13 | iso_pu_bacteria | 2925326138 | 2925329310 | 250 |
| 14 | iso_pu_bacteria | 2929206907 | 2929207018 | 250 |
| 15 | iso_pu_bacteria | 8054795415 | 8054799076 | 250 |
| 16 | iso_pu_bacteria | 2643221543 | 2643736934 | 251 |
| 17 | iso_pu_bacteria | 2643221676 | 2644423371 | 251 |
| 18 | iso_pu_bacteria | 2671180694 | 2673818611 | 251 |
| 19 | iso_pu_bacteria | 2857472729 | 2857477449 | 251 |
| 20 | iso_pu_bacteria | 2864997549 | 2865000926 | 251 |
| 21 | iso_pu_bacteria | 2919425241 | 2919430570 | 251 |
| 22 | iso_pu_bacteria | 8002317523 | 8002322139 | 251 |
| 23 | 3300048919 | Ga0496116_0006506 | Ga0496116_0006506_8523_9440 | 252 |
| 24 | 3300048929 | Ga0496126_0005151 | Ga0496126_0005151_6877_7764 | 252 |
| 25 | iso_pu_bacteria | 2857453340 | 2857459112 | 252 |
| 26 | iso_pu_bacteria | 2971410472 | 2971416612 | 252 |
| 27 | iso_pu_bacteria | 8056533031 | 8056536048 | 252 |
| 28 | 3300003187 | JGI25151J46595_10001734 | JGI25151J46595_100017344 | 253 |
| 29 | 3300003761 | Ga0055535_1009351 | Ga0055535_10093512 | 253 |
| 30 | 3300003841 | Ga0055541_1000196 | Ga0055541_100019616 | 253 |
| 31 | 3300003841 | Ga0055541_1000806 | Ga0055541_10008062 | 253 |
| 32 | 3300009147 | Ga0114129_10230885 | Ga0114129_102308854 | 253 |
| 33 | 3300025225 | Ga0209566_100091 | Ga0209566_10009187 | 253 |
| 34 | 3300025225 | Ga0209566_100387 | Ga0209566_10038713 | 253 |
| 35 | 3300025292 | Ga0209676_1005597 | Ga0209676_10055976 | 253 |
| 36 | 3300025294 | Ga0209025_1003725 | Ga0209025_10037254 | 253 |
| 37 | 3300041404 | Ga0439436_0001040 | Ga0439436_0001040_2139_3038 | 253 |
| 38 | 3300041406 | Ga0439439_0000909 | Ga0439439_0000909_3310_4209 | 253 |
| 39 | 3300041999 | Ga0439433_0015175 | Ga0439433_0015175_505_1404 | 253 |
| 40 | 3300042007 | Ga0439449_0001353 | Ga0439449_0001353_4101_5000 | 253 |
| 41 | 3300042015 | Ga0439462_0000731 | Ga0439462_0000731_5579_6478 | 253 |
| 42 | 3300050507 | nmdc:mga05p37_602020_c1 | nmdc:mga05p37_602020_c1_46_948 | 253 |
| 43 | iso_pu_bacteria | 2889042446 | 2889048114 | 253 |
| 44 | 3300003187 | JGI25151J46595_10009486 | JGI25151J46595_100094864 | 254 |
| 45 | 3300003751 | Ga0055538_1000452 | Ga0055538_100045215 | 254 |
| 46 | 3300025224 | Ga0209784_100075 | Ga0209784_10007536 | 254 |
| 47 | 3300025224 | Ga0209784_100485 | Ga0209784_10048515 | 254 |
| 48 | 3300025225 | Ga0209566_100891 | Ga0209566_1008913 | 254 |
| 49 | 3300025242 | Ga0209258_101334 | Ga0209258_1013342 | 254 |
| 50 | 3300025294 | Ga0209025_1002667 | Ga0209025_10026676 | 254 |
| 51 | 3300049572 | Ga0501036_0278545 | Ga0501036_0278545_268_1167 | 254 |
| 52 | 3300049576 | Ga0501040_0352764 | Ga0501040_0352764_135_1034 | 254 |
| 53 | 3300049578 | Ga0501042_0241844 | Ga0501042_0241844_130_1029 | 254 |
| 54 | 3300049581 | Ga0501047_0015856 | Ga0501047_0015856_1453_2352 | 254 |
| 55 | 3300049586 | Ga0501070_0020875 | Ga0501070_0020875_35_934 | 254 |
| 56 | 3300049741 | Ga0501079_0275524 | Ga0501079_0275524_142_1041 | 254 |
| 57 | iso_pu_bacteria | 2907202186 | 2907207273 | 254 |
| 58 | 3300025294 | Ga0209025_1009550 | Ga0209025_10095507 | 255 |
| 59 | iso_pu_bacteria | 2571042588 | 2573036599 | 255 |
| 60 | iso_pu_bacteria | 2791355222 | 2793185597 | 255 |
| 61 | iso_pu_bacteria | 2888578766 | 2888584569 | 255 |
| 62 | iso_pu_bacteria | 2889049205 | 2889052993 | 255 |
| 63 | iso_pu_bacteria | 2904113452 | 2904117872 | 255 |
| 64 | iso_pu_bacteria | 2904162308 | 2904168037 | 255 |
| 65 | 3300009011 | Ga0105251_10004765 | Ga0105251_100047655 | 257 |
| 66 | 3300009036 | Ga0105244_10036868 | Ga0105244_100368682 | 257 |
| 67 | 3300009036 | Ga0105244_10042253 | Ga0105244_100422532 | 257 |
| 68 | 3300011119 | Ga0105246_10000485 | Ga0105246_1000048512 | 257 |
| 69 | 3300025225 | Ga0209566_102244 | Ga0209566_1022442 | 257 |
| 70 | 3300037312 | Ga0395899_0000860 | Ga0395899_0000860_25785_26693 | 257 |
| 71 | 3300037312 | Ga0395899_0003246 | Ga0395899_0003246_11847_12755 | 257 |
| 72 | 3300042007 | Ga0439449_0061638 | Ga0439449_0061638_350_1258 | 257 |
| 73 | 3300048919 | Ga0496116_0002717 | Ga0496116_0002717_13097_13999 | 257 |
| 74 | 3300048924 | Ga0496121_0125946 | Ga0496121_0125946_542_1444 | 257 |
| 75 | 3300048925 | Ga0496122_0122607 | Ga0496122_0122607_552_1469 | 257 |
| 76 | 3300048925 | Ga0496122_0169325 | Ga0496122_0169325_204_1121 | 257 |
| 77 | 3300048926 | Ga0496123_0036068 | Ga0496123_0036068_2360_3277 | 257 |
| 78 | 3300048927 | Ga0496124_0001688 | Ga0496124_0001688_3974_4891 | 257 |
| 79 | 3300048928 | Ga0496125_0001318 | Ga0496125_0001318_763_1680 | 257 |
| 80 | 3300048928 | Ga0496125_0101279 | Ga0496125_0101279_763_1680 | 257 |
| 81 | iso_pu_bacteria | 2938649242 | 2938652569 | 258 |
| 82 | iso_pu_bacteria | 2968558590 | 2968559269 | 258 |
| 83 | iso_pu_bacteria | 2971511577 | 2971514380 | 258 |
| 84 | iso_pu_bacteria | 2980176882 | 2980180594 | 258 |
| 85 | iso_pu_bacteria | 2988225383 | 2988227449 | 258 |
| 86 | iso_pu_bacteria | 2996632988 | 2996637791 | 258 |
| 87 | iso_pu_bacteria | 2576861424 | 2578339023 | 259 |
| 88 | iso_pu_bacteria | 2600255286 | 2601640426 | 259 |
| 89 | iso_pu_bacteria | 2728369359 | 2730136937 | 259 |
| 90 | iso_pu_bacteria | 2821111986 | 2821116773 | 259 |
| 91 | iso_pu_bacteria | 2881636855 | 2881638029 | 259 |
| 92 | iso_pu_bacteria | 2885526491 | 2885532574 | 259 |
| 93 | iso_pu_bacteria | 2904490793 | 2904494382 | 259 |
| 94 | iso_pu_bacteria | 2919160200 | 2919165090 | 259 |
| 95 | iso_pu_bacteria | 2931384279 | 2931385229 | 259 |
| 96 | iso_pu_bacteria | 2939679117 | 2939680598 | 259 |
| 97 | iso_pu_bacteria | 2939702853 | 2939702871 | 259 |
| 98 | iso_pu_bacteria | 2945991243 | 2945996137 | 259 |
| 99 | iso_pu_bacteria | 2946053406 | 2946058829 | 259 |
| 100 | iso_pu_bacteria | 2971403814 | 2971410359 | 259 |
| 101 | iso_pu_bacteria | 2563366752 | 2563930643 | 260 |
| 102 | 3300002737 | JGI25162J39368_1004321 | JGI25162J39368_10043215 | 263 |
| 103 | 3300009036 | Ga0105244_10026044 | Ga0105244_100260442 | 263 |
| 104 | 3300025233 | Ga0209437_100453 | Ga0209437_1004538 | 263 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 5ziy-assembly3.cif.gz_B | crystal structure of bacillus cereus flgl | 0.9035 | 57 | 257 |
| 3v47-assembly1.cif.gz_D | crystal structure of the n-terminal fragment of zebrafish tlr5 in complex with salmonella flagellin | 0.8894 | 63 | 186 |
| 5ziy-assembly3.cif.gz_B | crystal structure of bacillus cereus flgl | 0.8891 | 57 | 257 |
| 3v47-assembly1.cif.gz_C | crystal structure of the n-terminal fragment of zebrafish tlr5 in complex with salmonella flagellin | 0.8878 | 64 | 186 |
| 1io1-assembly1.cif.gz_A | crystal structure of f41 fragment of flagellin | 0.8866 | 57 | 186 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 3v47D01 | Mainly Alpha;Up-down Bundle;f41 fragment of flagellin, N-terminal domain;f41 fragment of flagellin, N-terminal domain | 0.8478 | 63 | 255 | 1.20.1330.10 |
| 5gy2D00 | Mainly Alpha;Up-down Bundle;f41 fragment of flagellin, N-terminal domain;f41 fragment of flagellin, N-terminal domain | 0.8188 | 55 | 253 | 1.20.1330.10 |
| 5gy2D00 | Mainly Alpha;Up-down Bundle;f41 fragment of flagellin, N-terminal domain;f41 fragment of flagellin, N-terminal domain | 0.8017 | 55 | 253 | 1.20.1330.10 |
| 3v47D01 | Mainly Alpha;Up-down Bundle;f41 fragment of flagellin, N-terminal domain;f41 fragment of flagellin, N-terminal domain | 0.7894 | 63 | 255 | 1.20.1330.10 |
| 2d4xA00 | Mainly Alpha;Up-down Bundle;f41 fragment of flagellin, N-terminal domain;f41 fragment of flagellin, N-terminal domain | 0.7741 | 50 | 251 | 1.20.1330.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A7W5AXA3-F1-model_v4 | Flagellin | 0.9271 | 51 | 258 |
GO:0005198
GO:0005576 GO:0009288 |
| AF-A0A2A5K3B2-F1-model_v4 | deleted | 0.9264 | 29 | 256 |
|
| AF-A0A4V1T519-F1-model_v4 | deleted | 0.9166 | 57 | 260 |
|
| AF-A0A644YH30-F1-model_v4 | Flagellin C-terminal domain-containing protein | 0.8792 | 51 | 256 |
GO:0005198
GO:0009288 |
| AF-A0A353T4K3-F1-model_v4 | Flagellin | 0.8662 | 53 | 261 |
GO:0005198
GO:0005576 GO:0009288 |
Predicted Structure (AlphaFold2)
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