F022550

General Info

Members Datasets Scaffolds Average Seq Length
103 96 102 403

Family's Representative Sequence

Representative Sequence 3300046511|Ga0495608_0019299|Ga0495608_0019299_2869_4137
Length 422
Sequence MNPPTEFKNPYRPGAGHMPRYLAGREREYAEFDRLLGQDEILENLVLTGLRGVGKTVLLEKFKSRALEHGWVWASADLSESASISETALAERLLADLALITSSTTVADPAVRQEVGFSAPPQPREMPLTHEILVAVYERTPGLIADKIKATLEFAWEQLREQGQHRVIFAYDEAQNLSDHAAKEQFPLSVLLDVFQSIQKKGIPFMPTLFPKLVDARTYAERMFRVMTLTKLSTDESREAILKPIEVAECPVRLSPESVEVIIHESAGYPYFIQFIGREVYDVFIRQHADDETKVVPIEAIQRKLDADFFAGRWARITDRQRELLWVVAHLDQPDEEFTILELTAETKARLSRPFSPSNASQMLTGLAERGMIYKNRFGKYSFAVPLLGRFIRRAYELPAHDFDVRRDTDGTPEEVREGRER

Samples

Sample ID Description Type Environment
1 2919709256 Sphingobium xenophagum 4256 Isolate Unclassified
2 3300001977 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5 Metagenome Rhizosphere
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
9 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
10 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
11 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
12 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
13 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
14 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
15 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
16 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
17 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
18 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
19 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
20 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
21 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
22 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
23 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
24 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
25 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
26 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
27 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
28 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
29 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
30 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
31 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
39 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
40 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
41 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
42 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
43 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
44 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
45 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
46 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
47 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
48 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
49 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
50 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
51 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
52 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
53 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
54 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
55 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
56 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
57 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
58 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
59 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
60 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
61 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
62 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
63 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
64 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
65 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
66 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
67 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
68 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
69 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
70 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
71 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
72 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
73 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
74 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
75 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
76 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
77 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
78 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
79 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
80 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
81 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
82 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
83 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
84 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
85 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
86 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
87 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
88 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
89 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
90 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
91 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
92 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
93 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
94 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
95 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
96 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.03
Metatranscriptomes 0
Isolates 0.97

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.94
Nodule 0
Rhizoplane 12.62
Rhizosphere 83.5
Stem 0
Stem Tuber 0
Unclassified 1.94

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24746J21847_1000772 3300001977 Bacteria 4923
2 rootL2_10202015 3300003322 Bacteria 1649
3 Ga0070683_100258313 3300005329 Bacteria 1657
4 Ga0070690_100005970 3300005330 Bacteria 6877
5 Ga0070682_100000040 3300005337 Bacteria 143944
6 Ga0068868_100000151 3300005338 Bacteria 44963
7 Ga0070710_10059514 3300005437 Bacteria 2170
8 Ga0068867_100001857 3300005459 Bacteria 14683
9 Ga0070706_100162553 3300005467 Bacteria 2085
10 Ga0070684_100319886 3300005535 Bacteria 1425
11 Ga0070686_100010187 3300005544 Bacteria 5290
12 Ga0068856_100016649 3300005614 Bacteria 7119
13 Ga0068856_100036766 3300005614 Bacteria 4802
14 Ga0068852_100187491 3300005616 Bacteria 1949
15 Ga0081539_10019265 3300005985 Bacteria 4680
16 Ga0070715_10000001 3300006163 Bacteria 693690
17 Ga0068871_100062649 3300006358 Bacteria 3040
18 Ga0075428_100164985 3300006844 Bacteria 2403
19 Ga0068865_100000040 3300006881 Bacteria 72979
20 Ga0105241_10203036 3300009174 Bacteria 1657
21 Ga0105242_10203072 3300009176 Bacteria 1761
22 Ga0105238_10085059 3300009551 Bacteria 3152
23 Ga0105249_10013618 3300009553 Bacteria 7182
24 Ga0105239_10054332 3300010375 Unclassified 4393
25 Ga0157371_10006368 3300013102 Bacteria 9763
26 Ga0157369_10409131 3300013105 Bacteria 1407
27 Ga0157372_10000150 3300013307 Bacteria 75963
28 Ga0157375_10000095 3300013308 Bacteria 88952
29 Ga0157380_10000072 3300014326 Bacteria 56363
30 Ga0157376_10148253 3300014969 Bacteria 2113
31 Ga0207685_10000011 3300025905 Bacteria 213430
32 Ga0207654_10143723 3300025911 Unclassified 1524
33 Ga0207686_10036732 3300025934 Bacteria 2952
34 Ga0207704_10000079 3300025938 Bacteria 58183
35 Ga0207677_10000372 3300026023 Bacteria 31162
36 Ga0207702_10001236 3300026078 Bacteria 25851
37 Ga0207648_10004376 3300026089 Bacteria 14522
38 Ga0373937_0024979 3300036401 Bacteria 5393
39 Ga0495603_0000023 3300046455 Bacteria 63559
40 Ga0495629_0000619 3300046459 Bacteria 28922
41 Ga0495629_0036057 3300046459 Bacteria 3493
42 Ga0495641_0000355 3300046461 Bacteria 37753
43 Ga0495664_0000069 3300046477 Bacteria 49516
44 Ga0495608_0000001 3300046511 Bacteria 411278
45 Ga0495608_0019299 3300046511 Bacteria 4693
46 Ga0495640_0006754 3300046533 Bacteria 9054
47 Ga0495645_0002497 3300046543 Bacteria 12483
48 Ga0495633_0026669 3300046558 Bacteria 2833
49 Ga0495668_0069545 3300046616 Bacteria 1936
50 Ga0495635_0000037 3300046663 Bacteria 91677
51 Ga0495657_0000002 3300046675 Bacteria 411958
52 Ga0495646_0059372 3300046680 Bacteria 2284
53 Ga0495647_0002753 3300046681 Bacteria 5578
54 Ga0495658_0007091 3300046683 Bacteria 5535
55 Ga0495669_0000064 3300046684 Bacteria 70549
56 Ga0495624_0000012 3300046690 Bacteria 124128
57 Ga0495670_0008470 3300046691 Bacteria 5058
58 Ga0495604_0000794 3300047317 Bacteria 26528
59 Ga0495604_0001300 3300047317 Bacteria 20418
60 Ga0495675_0000104 3300047444 Bacteria 60748
61 Ga0495602_0000063 3300048088 Bacteria 104915
62 Ga0496100_0000004 3300048903 Bacteria 321778
63 Ga0496101_0000007 3300048904 Bacteria 321778
64 Ga0496106_0000004 3300048909 Bacteria 279896
65 Ga0496106_0000873 3300048909 Bacteria 21961
66 Ga0496107_0000001 3300048910 Bacteria 321778
67 Ga0496108_0000492 3300048911 Bacteria 31518
68 Ga0496109_0000058 3300048912 Bacteria 118556
69 Ga0496110_0000170 3300048913 Bacteria 39947
70 Ga0496111_0000001 3300048914 Bacteria 194837
71 Ga0496112_0001473 3300048915 Bacteria 18072
72 Ga0496113_0000003 3300048916 Bacteria 123519
73 Ga0496114_0000042 3300048917 Bacteria 133043
74 Ga0496115_0000171 3300048918 Bacteria 60120
75 Ga0501031_0000389 3300049568 Bacteria 25791
76 Ga0501032_0000149 3300049569 Bacteria 57163
77 Ga0501033_0000809 3300049570 Bacteria 28636
78 Ga0501034_0007945 3300049571 Bacteria 11268
79 Ga0501036_0000219 3300049572 Bacteria 38401
80 Ga0501037_0000930 3300049573 Bacteria 21753
81 Ga0501038_0000708 3300049574 Bacteria 29776
82 Ga0501043_0000685 3300049579 Bacteria 29894
83 Ga0501046_0000845 3300049580 Bacteria 29842
84 Ga0501047_0000293 3300049581 Bacteria 57464
85 Ga0501048_0000004 3300049582 Bacteria 100672
86 Ga0501069_0032028 3300049585 Unclassified 2894
87 Ga0501070_0000086 3300049586 Bacteria 78615
88 Ga0501071_0179889 3300049587 Unclassified 1584
89 Ga0501073_0000956 3300049589 Bacteria 20790
90 Ga0501079_0003402 3300049741 Bacteria 11678
91 Ga0501080_0037137 3300049742 Unclassified 4548
92 Ga0501083_0003218 3300049744 Bacteria 11379
93 Ga0501035_0000572 3300049822 Bacteria 40727
94 Ga0501044_0000229 3300049823 Bacteria 70563
95 Ga0495601_0009650 3300053077 Bacteria 5712
96 Ga0495601_0164409 3300053077 Bacteria 1450
97 Ga0495655_0001871 3300053083 Bacteria 3275
98 Ga0495595_0000001 3300053084 Bacteria 495226
99 Ga0495619_0000015 3300053085 Bacteria 252787
100 Ga0495619_0000094 3300053085 Bacteria 67416
101 Ga0500641_0030182 3300053096 Bacteria 2128
102 Ga0500614_000070 3300053123 Bacteria 22144

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048917 Ga0496114_0000042 Ga0496114_0000042_21785_22792 335
2 3300048918 Ga0496115_0000171 Ga0496115_0000171_9844_10851 335
3 3300046663 Ga0495635_0000037 Ga0495635_0000037_65200_66306 368
4 3300046455 Ga0495603_0000023 Ga0495603_0000023_46498_47694 371
5 3300048909 Ga0496106_0000873 Ga0496106_0000873_5154_6350 384
6 3300046459 Ga0495629_0000619 Ga0495629_0000619_14735_15895 386
7 3300046683 Ga0495658_0007091 Ga0495658_0007091_3221_4390 389
8 3300013308 Ga0157375_10000095 Ga0157375_1000009541 390
9 3300046461 Ga0495641_0000355 Ga0495641_0000355_22798_23970 390
10 3300046477 Ga0495664_0000069 Ga0495664_0000069_13371_14543 390
11 3300048911 Ga0496108_0000492 Ga0496108_0000492_4143_5315 390
12 3300048912 Ga0496109_0000058 Ga0496109_0000058_60056_61228 390
13 3300053085 Ga0495619_0000015 Ga0495619_0000015_29582_30754 390
14 3300053123 Ga0500614_000070 Ga0500614_000070_19799_20971 390
15 3300003322 rootL2_10202015 rootL2_102020151 391
16 3300014326 Ga0157380_10000072 Ga0157380_1000007214 392
17 3300046558 Ga0495633_0026669 Ga0495633_0026669_478_1656 392
18 3300046691 Ga0495670_0008470 Ga0495670_0008470_1699_2877 392
19 3300009551 Ga0105238_10085059 Ga0105238_100850593 394
20 3300047317 Ga0495604_0000794 Ga0495604_0000794_18974_20164 396
21 3300053083 Ga0495655_0001871 Ga0495655_0001871_863_2053 396
22 3300010375 Ga0105239_10054332 Ga0105239_100543326 397
23 3300013102 Ga0157371_10006368 Ga0157371_100063686 397
24 3300014969 Ga0157376_10148253 Ga0157376_101482532 397
25 3300046681 Ga0495647_0002753 Ga0495647_0002753_2900_4096 398
26 3300053096 Ga0500641_0030182 Ga0500641_0030182_756_1964 398
27 3300036401 Ga0373937_0024979 Ga0373937_0024979_898_2109 399
28 3300046684 Ga0495669_0000064 Ga0495669_0000064_19251_20471 399
29 3300048903 Ga0496100_0000004 Ga0496100_0000004_98787_100019 399
30 3300048904 Ga0496101_0000007 Ga0496101_0000007_98787_100019 399
31 3300048909 Ga0496106_0000004 Ga0496106_0000004_60201_61433 399
32 3300048910 Ga0496107_0000001 Ga0496107_0000001_98787_100019 399
33 3300049568 Ga0501031_0000389 Ga0501031_0000389_24342_25556 399
34 3300049569 Ga0501032_0000149 Ga0501032_0000149_43156_44370 399
35 3300049570 Ga0501033_0000809 Ga0501033_0000809_12949_14163 399
36 3300049571 Ga0501034_0007945 Ga0501034_0007945_8707_9921 399
37 3300049572 Ga0501036_0000219 Ga0501036_0000219_24408_25622 399
38 3300049573 Ga0501037_0000930 Ga0501037_0000930_7757_8971 399
39 3300049574 Ga0501038_0000708 Ga0501038_0000708_15810_17024 399
40 3300049579 Ga0501043_0000685 Ga0501043_0000685_15876_17090 399
41 3300049580 Ga0501046_0000845 Ga0501046_0000845_12786_14000 399
42 3300049581 Ga0501047_0000293 Ga0501047_0000293_13089_14303 399
43 3300049582 Ga0501048_0000004 Ga0501048_0000004_24259_25473 399
44 3300049585 Ga0501069_0032028 Ga0501069_0032028_166_1380 399
45 3300049586 Ga0501070_0000086 Ga0501070_0000086_43162_44376 399
46 3300049587 Ga0501071_0179889 Ga0501071_0179889_137_1351 399
47 3300049589 Ga0501073_0000956 Ga0501073_0000956_15856_17070 399
48 3300049741 Ga0501079_0003402 Ga0501079_0003402_8770_9984 399
49 3300049742 Ga0501080_0037137 Ga0501080_0037137_817_2031 399
50 3300049744 Ga0501083_0003218 Ga0501083_0003218_2652_3866 399
51 3300049822 Ga0501035_0000572 Ga0501035_0000572_13089_14303 399
52 3300049823 Ga0501044_0000229 Ga0501044_0000229_12800_14014 399
53 3300009176 Ga0105242_10203072 Ga0105242_102030722 400
54 3300025934 Ga0207686_10036732 Ga0207686_100367323 400
55 3300005329 Ga0070683_100258313 Ga0070683_1002583132 401
56 3300005614 Ga0068856_100016649 Ga0068856_1000166492 401
57 3300048915 Ga0496112_0001473 Ga0496112_0001473_7147_8364 401
58 3300048916 Ga0496113_0000003 Ga0496113_0000003_51724_52941 401
59 3300046511 Ga0495608_0000001 Ga0495608_0000001_342869_344077 402
60 3300046675 Ga0495657_0000002 Ga0495657_0000002_343549_344757 402
61 3300047444 Ga0495675_0000104 Ga0495675_0000104_7152_8360 402
62 3300053084 Ga0495595_0000001 Ga0495595_0000001_67202_68410 402
63 3300053085 Ga0495619_0000094 Ga0495619_0000094_13871_15079 402
64 3300005614 Ga0068856_100036766 Ga0068856_1000367663 403
65 3300006844 Ga0075428_100164985 Ga0075428_1001649852 403
66 3300026078 Ga0207702_10001236 Ga0207702_100012363 403
67 3300046533 Ga0495640_0006754 Ga0495640_0006754_740_1972 403
68 3300013105 Ga0157369_10409131 Ga0157369_104091311 404
69 3300005330 Ga0070690_100005970 Ga0070690_1000059706 405
70 3300005337 Ga0070682_100000040 Ga0070682_10000004084 405
71 3300009174 Ga0105241_10203036 Ga0105241_102030362 405
72 3300009553 Ga0105249_10013618 Ga0105249_100136185 405
73 3300013307 Ga0157372_10000150 Ga0157372_1000015053 405
74 3300025911 Ga0207654_10143723 Ga0207654_101437232 405
75 3300048913 Ga0496110_0000170 Ga0496110_0000170_26476_27693 405
76 3300048914 Ga0496111_0000001 Ga0496111_0000001_66353_67570 405
77 iso_pu_bacteria 2919709256 2919710778 405
78 3300053077 Ga0495601_0009650 Ga0495601_0009650_1962_3185 406
79 3300053077 Ga0495601_0164409 Ga0495601_0164409_78_1301 406
80 3300005437 Ga0070710_10059514 Ga0070710_100595141 407
81 3300046543 Ga0495645_0002497 Ga0495645_0002497_11155_12378 407
82 3300005544 Ga0070686_100010187 Ga0070686_1000101873 408
83 3300005985 Ga0081539_10019265 Ga0081539_100192652 408
84 3300046616 Ga0495668_0069545 Ga0495668_0069545_533_1765 408
85 3300046680 Ga0495646_0059372 Ga0495646_0059372_887_2113 408
86 3300005467 Ga0070706_100162553 Ga0070706_1001625532 410
87 3300006358 Ga0068871_100062649 Ga0068871_1000626492 410
88 3300046511 Ga0495608_0019299 Ga0495608_0019299_2869_4137 410
89 3300005535 Ga0070684_100319886 Ga0070684_1003198861 411
90 3300006163 Ga0070715_10000001 Ga0070715_10000001187 411
91 3300025905 Ga0207685_10000011 Ga0207685_10000011187 411
92 3300006881 Ga0068865_100000040 Ga0068865_1000000406 413
93 3300025938 Ga0207704_10000079 Ga0207704_1000007959 413
94 3300046690 Ga0495624_0000012 Ga0495624_0000012_27636_28883 414
95 3300047317 Ga0495604_0001300 Ga0495604_0001300_18746_19999 414
96 3300048088 Ga0495602_0000063 Ga0495602_0000063_93275_94528 414
97 3300005338 Ga0068868_100000151 Ga0068868_10000015134 415
98 3300005459 Ga0068867_100001857 Ga0068867_1000018579 415
99 3300005616 Ga0068852_100187491 Ga0068852_1001874912 415
100 3300026023 Ga0207677_10000372 Ga0207677_1000037228 415
101 3300026089 Ga0207648_10004376 Ga0207648_1000437610 415
102 3300046459 Ga0495629_0036057 Ga0495629_0036057_1644_2897 415
103 3300001977 JGI24746J21847_1000772 JGI24746J21847_10007726 417

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13401

AAA_22

AAA domain

43

206

0.75

PF13191

AAA_16

AAA ATPase domain

21

212

0.7

Structural Annotation

Top 5 Hits

ID Description Score Start End
7okq-assembly1.cif.gz_C error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.7455 324 390
6qil-assembly2.cif.gz_C the complex structure of hsrosr-s1 (vng0258h/rosr-s1) 0.7348 320 399
7dg2-assembly1.cif.gz_A nse1-nse3-nse4 complex 0.7037 321 388
5x06-assembly1.cif.gz_H dna replication regulation protein 0.7007 18 246
8bd5-assembly1.cif.gz_J cas12k-sgrna-dsdna-s15-tniq-tnsc transposon recruitment complex 0.7003 14 308
ID Description Score Start End Superfamily
af_Q9QY24_7_70_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8239 324 390 1.10.10.10
af_C0HIA3_117_198_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8045 325 388 1.10.10.10
af_Q0JLM2_121_202_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.7894 325 388 1.10.10.10
af_Q8K2X3_307_378_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.7886 324 388 1.10.10.10
af_P47050_600_749_3.30.230.130 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2;Cullin; Chain C, Domain 2 0.7842 329 388 3.30.230.130
ID Description Score Start End GO Terms
AF-A0A0F9E2M9-F1-model_v4 ATP-binding protein 0.9675 130 399
AF-V7J8B4-F1-model_v4 deleted 0.9591 132 362
AF-A0A1F4V3A5-F1-model_v4 ATPase domain-containing protein 0.949 155 399 GO:0016020
AF-V7J8B4-F1-model_v4 deleted 0.9433 132 362
AF-A0A7X7F3V2-F1-model_v4 ATP-binding protein 0.9311 176 415 GO:0005524

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pLDDT pTM Quality
84.98 0.81 High
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Predicted Structure (AlphaFold2)

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